# terms

id: PBO:0090767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein","termid":"PBO:0090767"}


id: PBO:0068476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 55, pseudogene","termid":"PBO:0068476"}


id: PR:O94713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.14c","synonyms":[{"name":"Spom972h-meu27","type":"exact"}],"termid":"PR:O94713"}


id: GO:0060496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in lung development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in lung development","type":"exact"}],"termid":"GO:0060496"}


id: PBO:0090100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1","termid":"PBO:0090100"}


id: GO:1905473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K79 dimethylation (obsolete GO:1905473)","synonyms":[{"name":"activation of histone H3 K79 dimethylation","type":"narrow"},{"name":"activation of histone H3-K79 dimethylation","type":"narrow"},{"name":"activation of histone lysine H3 K79 dimethylation","type":"narrow"},{"name":"positive regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"positive regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"up regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"up regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"up regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"up-regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"up-regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"up-regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"upregulation of histone H3 K79 dimethylation","type":"exact"},{"name":"upregulation of histone H3-K79 dimethylation","type":"exact"},{"name":"upregulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905473"}


id: PBO:0054023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1354","termid":"PBO:0054023"}


id: GO:0007548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the sex of an organism by physical differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex differentiation","secondary_identifiers":["Wikipedia:Sexual_differentiation"],"termid":"GO:0007548"}


id: PBO:0036256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism in human (predicted)","termid":"PBO:0036256"}


id: PBO:0066833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 132","termid":"PBO:0066833"}


id: PBO:0003881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4 (predicted)","termid":"PBO:0003881"}


id: PBO:0072850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A","termid":"PBO:0072850"}


id: GO:1904727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:TermGenie","PMID:23496142","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"negatively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of replicative senescence","synonyms":[{"name":"down regulation of replicative senescence","type":"exact"},{"name":"down-regulation of replicative senescence","type":"exact"},{"name":"downregulation of replicative senescence","type":"exact"},{"name":"inhibition of replicative senescence","type":"narrow"}],"termid":"GO:1904727"}


id: GO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of potassium ion transport","synonyms":[{"name":"activation of potassium ion transport","type":"narrow"},{"name":"positive regulation of K+ conductance","type":"narrow"},{"name":"positive regulation of K+ transport","type":"exact"},{"name":"positive regulation of potassium conductance","type":"narrow"},{"name":"positive regulation of potassium ion conductance","type":"narrow"},{"name":"positive regulation of potassium transport","type":"exact"},{"name":"stimulation of potassium ion transport","type":"narrow"},{"name":"up regulation of potassium ion transport","type":"exact"},{"name":"up-regulation of potassium ion transport","type":"exact"},{"name":"upregulation of potassium ion transport","type":"exact"}],"termid":"GO:0043268"}


id: PBO:0026881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_production_of_siRNA_involved_in_chromatin_silencing_by_small_RNA","termid":"PBO:0026881"}


id: PR:O74903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC613.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized calcium-binding protein C613.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.03","synonyms":[{"name":"Spom972h-SPCC613.03","type":"exact"}],"termid":"PR:O74903"}


id: GO:1990175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EH domain of a protein. The EH stand for Eps15 homology. This was originally identified as a motif present in three copies at the NH2-termini of Eps15 and of the related molecule Eps15R.","definition_xrefs":["GOC:hjd","PMID:21115825","PMID:11911876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"EH domain binding","termid":"GO:1990175"}


id: MOD:01005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butylsulfenyl","synonyms":[{"name":"StBu","type":"exact"}],"termid":"MOD:01005"}


id: GO:0033433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AUU codon-amino acid adaptor activity","synonyms":[{"name":"ATT codon-amino acid adaptor activity","type":"exact"},{"name":"isoleucine tRNA","type":"related"}],"termid":"GO:0033433"}


id: GO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a linear element. A linear element is a proteinaceous scaffold associated with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["PMID:19756689","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to condensed nuclear chromosome","termid":"GO:1903084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to linear element","synonyms":[{"name":"protein localisation to linear element","type":"exact"}],"termid":"GO:0036181"}


id: PBO:0028651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rRNA_precursor_level","termid":"PBO:0028651"}


id: FYPO:0001504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell is lower than normal during sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular trehalose level during sporulation","synonyms":[{"name":"decreased cellular trehalose accumulation during sporulation","type":"related"},{"name":"reduced cellular trehalose level during sporulation","type":"exact"}],"termid":"FYPO:0001504"}


id: GO:0036512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the second alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:12829701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of second mannose on A branch","synonyms":[{"name":"conversion of (Man)8A(GlcNAc)2 to (Man)7AA(GlcNAc)2","type":"related"},{"name":"conversion of M8A to M7AA","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036512"}


id: PBO:0049198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin-related inter-fiber protein","termid":"PBO:0049198"}


id: MOD:00053
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N-acetyl-L-glutamic acid.","definition_xrefs":["ChEBI:17533","PubMed:6725286","RESID:AA0044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-glutamic acid","synonyms":[{"name":"(2S)-2-(acetamido)pentanedioic acid","type":"exact"},{"name":"2-(acetylamino)pentanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)pentanedioic acid","type":"exact"},{"name":"AcGlu","type":"exact"},{"name":"MOD_RES N-acetylglutamate","type":"exact"},{"name":"N-acetyl-L-glutamic acid","type":"exact"},{"name":"N-acetylated L-glutamic acid","type":"exact"},{"name":"acetylglutamic acid","type":"exact"}],"termid":"MOD:00053"}


id: GO:0097331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytarabine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytarabine","termid":"GO:0097331"}


id: GO:0046127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside catabolic process","termid":"GO:0046121"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside degradation","type":"exact"}],"termid":"GO:0046127"}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: PBO:0068353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 133","termid":"PBO:0068353"}


id: GO:0101002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Highly exocytosable gelatinase-poor granules found in neutrophils and rich in ficolin-1. Ficolin-1 is released from neutrophil granules by stimulation with fMLP or PMA, and the majority becomes associated with the surface membrane of the cells and can be detected by flow cytometry.","definition_xrefs":["GOC:mec","PMID:19741154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ficolin-1-rich granule","synonyms":[{"name":"ficolin granule","type":"related"},{"name":"ficolin-1 rich granule","type":"exact"}],"termid":"GO:0101002"}


id: PBO:0029579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_reactive_oxygen_species_level","termid":"PBO:0029579"}


id: GO:0016643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.4.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016643"}


id: PBO:0005228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit (predicted)","termid":"PBO:0005228"}


id: PBO:0080938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel","termid":"PBO:0080938"}


id: PBO:0111775
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier","termid":"PBO:0111775"}


id: GO:2001144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001144"}


id: PBO:0053545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 551","termid":"PBO:0053545"}


id: GO:0030961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-arginine to form peptidyl-hydroxyarginine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine hydroxylation","termid":"GO:0030961"}


id: PATO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentrated","termid":"PATO:0001159"}


id: PBO:0071311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 34","termid":"PBO:0071311"}


id: GO:0046192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic phenol-containing compound metabolic process","termid":"GO:0042215"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic phenol-containing compound biosynthetic process","synonyms":[{"name":"anaerobic phenol-containing compound anabolism","type":"exact"},{"name":"anaerobic phenol-containing compound biosynthesis","type":"exact"},{"name":"anaerobic phenol-containing compound formation","type":"exact"},{"name":"anaerobic phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046192"}


id: PBO:0048050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formiminotransferase cyclodeaminase N-terminal like","termid":"PBO:0048050"}


id: FYPO:0001539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of magnesium ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular magnesium level","synonyms":[{"name":"normal cellular magnesium accumulation","type":"related"},{"name":"normal cellular magnesium ion level","type":"exact"},{"name":"normal cellular magnesium level during mitotic cell cycle","type":"related"},{"name":"normal cellular magnesium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001539"}


id: PBO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 1","termid":"PBO:0043936"}


id: SO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:upstream","type":"related"},{"name":"Jannovar:upstream_gene_variant","type":"exact"},{"name":"VEP:upstream_gene_variant","type":"exact"},{"name":"snpEff:UPSTREAM","type":"exact"},{"name":"upstream gene variant","type":"exact"}],"termid":"SO:0001631"}


id: PBO:0042823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 2","termid":"PBO:0042823"}


id: PBO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1 antisense RNA 1","termid":"PBO:0052050"}


id: PBO:0110811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type, meiosis-specific copper activator, Mca1","termid":"PBO:0110811"}


id: GO:0016189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a synaptic vesicle with an endosome.","definition_xrefs":["PMID:10099709","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"part_of","term_name":"synaptic vesicle endosomal processing","termid":"GO:0099532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle to endosome fusion","termid":"GO:0016189"}


id: GO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction (attachment structure) found in epithelial cells that links intermediate filaments to extracellular matrices via transmembrane complexes. In vertebrates, hemidesmosomes mediate contact between the basal side of epithelial cells and the basal lamina. In C. elegans, hemidesmosomes connect epithelial cells to distinct extracellular matrices on both the apical and basal cell surfaces.","definition_xrefs":["PMID:20205195","ISBN:0815316208","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hemidesmosome","secondary_identifiers":["Wikipedia:Hemidesmosome"],"synonyms":[{"name":"epidermal attachment structure","type":"narrow"},{"name":"fibrous organelle","type":"narrow"},{"name":"hemi-adherens junction","type":"related"},{"name":"trans-epithelial attachment","type":"narrow"}],"termid":"GO:0030056"}


id: GO:0102972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A12 + 2-oxoglutarate + O2 = gibberellin A110 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"gibberellin A12,2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A110-forming)","secondary_identifiers":["MetaCyc:RXN-947"],"termid":"GO:0102972"}


id: PBO:0041957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle and apoptosis regulator 1","termid":"PBO:0041957"}


id: PR:Q9Y7R1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC2H8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7R1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2H8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.04","synonyms":[{"name":"Spom972h-SPCC2H8.04","type":"exact"}],"termid":"PR:Q9Y7R1"}


id: PBO:0017083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Mug117","termid":"PBO:0017083"}


id: FYPO:0000721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to a pH stimulus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to pH","synonyms":[{"name":"abnormal cellular response to pH during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to pH during vegetative growth","type":"exact"}],"termid":"FYPO:0000721"}


id: GO:0048451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the petal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal formation","secondary_identifiers":["GO:0048419"],"termid":"GO:0048451"}


id: GO:0034126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0034124"},{"relation_name":"positively_regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034126"}


id: PBO:0068210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 517","termid":"PBO:0068210"}


id: GO:0052468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of salicylic acid in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of salicylic acid levels in symbiont (obsolete GO:0052468)","synonyms":[{"name":"modulation by organism of salicylic acid levels in symbiont","type":"exact"}],"termid":"GO:0052468"}


id: FYPO:0007322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PMID:32071154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased stress granule assembly during vegetative growth","termid":"FYPO:0007321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased stress granule assembly during cellular response to heat","synonyms":[{"name":"decreased cytoplasmic stress granule assembly during cellular response to heat","type":"exact"},{"name":"decreased stress granule assembly during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased stress granule assembly during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased stress granule assembly during cellular response to heat stress","type":"exact"},{"name":"decreased stress granule formation during cellular response to heat","type":"exact"},{"name":"reduced stress granule assembly during cellular response to heat","type":"exact"}],"termid":"FYPO:0007322"}


id: GO:0031912
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex basket- or funnel-like structure used by the cell to collect food and channel it to the cytostome; includes specialized sub-structures made up of closely-spaced cilia and underlying basal bodies and fibrillar systems.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"oral apparatus","termid":"GO:0031912"}


id: GO:0050630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoeugenol = S-adenosyl-L-homocysteine + isomethyleugenol.","definition_xrefs":["EC:2.1.1.146","MetaCyc:2.1.1.146-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(iso)eugenol O-methyltransferase activity","secondary_identifiers":["RHEA:17081"],"synonyms":[{"name":"S-adenosyl-L-methionine:isoeugenol O-methyltransferase activity","type":"related"},{"name":"isoeugenol O-methyltransferase activity","type":"exact"}],"termid":"GO:0050630"}


id: PBO:0053978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1290","termid":"PBO:0053978"}


id: PBO:0077759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 1","termid":"PBO:0077759"}


id: PATO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's lacks enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sufficiency","termid":"PATO:0001626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insufficient","synonyms":[{"name":"inadequate ","type":"related"}],"termid":"PATO:0001628"}


id: PBO:0086862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF-ubiquitin ligase F-box protein; based on both genetic and physical interactions and sequence similarity; identified in association with Cdc53p, Skp1p and Ubi4 in large and small-scale studies","termid":"PBO:0086862"}


id: GO:0072230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal straight tubule over time, from its formation to the mature structure. The metanephric proximal straight tubule is the part of the metanephric descending limb that extends from the metanephric proximal convoluted tubule to the metanephric descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal straight tubule development","termid":"GO:0072020"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal straight tubule development","synonyms":[{"name":"metanephric S3 development","type":"exact"}],"termid":"GO:0072230"}


id: GO:0040010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate of growth of all or part of an organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth rate","termid":"GO:0040009"},{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth rate","synonyms":[{"name":"activation of growth rate","type":"narrow"},{"name":"stimulation of growth rate","type":"narrow"},{"name":"up regulation of growth rate","type":"exact"},{"name":"up-regulation of growth rate","type":"exact"},{"name":"upregulation of growth rate","type":"exact"}],"termid":"GO:0040010"}


id: PBO:0047042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member C","termid":"PBO:0047042"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: PBO:0059566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1I, pseudogene","termid":"PBO:0059566"}


id: PBO:0047198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 216 member A","termid":"PBO:0047198"}


id: PBO:0071071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 73","termid":"PBO:0071071"}


id: FYPO:0002142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular reactive oxygen species level","synonyms":[{"name":"abnormal cellular ROS accumulation","type":"related"},{"name":"abnormal cellular reactive oxygen species level","type":"exact"},{"name":"altered cellular ROS level","type":"related"}],"termid":"FYPO:0002142"}


id: PBO:0084707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane ADP/ATP translocator; exchanges cytosolic ADP for mitochondrially synthesized ATP; phosphorylated; Aac1p is a minor isoform while Pet9p is the major ADP/ATP translocator; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084707"}


id: PBO:0111915
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0111915"}


id: PBO:0091294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Has Fused Lysosomes","termid":"PBO:0091294"}


id: GO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"is_a","term_name":"retina vasculature morphogenesis in camera-type eye","termid":"GO:0061299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal blood vessel morphogenesis","termid":"GO:0061304"}


id: PBO:0062190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene)","termid":"PBO:0062190"}


id: PBO:0079746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase L1","termid":"PBO:0079746"}


id: PBO:0083754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP; functions with methyltransferase Bud23p; predominantly nucleolar in distribution; required for 18S rRNA synthesis","termid":"PBO:0083754"}


id: PBO:0083645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0083645"}


id: PBO:0049841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 4","termid":"PBO:0049841"}


id: PBO:0091616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Isp5","termid":"PBO:0091616"}


id: GO:1902971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA duplex unwinding involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication DNA duplex unwinding","termid":"GO:1902320"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication DNA duplex unwinding","synonyms":[{"name":"DNA duplex unwinding involved in mitotic DNA replication","type":"exact"},{"name":"DNA duplex unwinding involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902971"}


id: PBO:0041487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C11orf98 pseudogene 2","termid":"PBO:0041487"}


id: GO:0048940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a glial cell in the anterior lateral line nerve are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in the anterior lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048940"}


id: GO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"negatively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of blood-brain barrier","synonyms":[{"name":"negative regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090212"}


id: GO:0072189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter development","termid":"GO:0072189"}


id: PBO:0080281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 44 pseudogene","termid":"PBO:0080281"}


id: PBO:0061031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninjurin 2","termid":"PBO:0061031"}


id: GO:0110084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:vw","PMID:29343550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110082"},{"relation_name":"is_a","term_name":"negative regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903500"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:1903476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0000281","GO:0044085","GO:0008150","GO:0007049","GO:0030036"],"is_obsolete":false,"name":"negative regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110084"}


id: GO:0045759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"negatively_regulates","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of action potential","synonyms":[{"name":"down regulation of action potential","type":"exact"},{"name":"down-regulation of action potential","type":"exact"},{"name":"downregulation of action potential","type":"exact"},{"name":"inhibition of action potential","type":"narrow"}],"termid":"GO:0045759"}


id: GO:0097654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that is capable of fusing intracellular vesicles to the plasma membrane of platelets for exocytosis of alpha-granules or dense granules. Contains isoforms of VAMP, SNAP and syntaxin proteins. Ternary SNARE complexes interact in a circular array to form ring complexes or channels around the membrane fusion. A common composition in human is VAMP-8, SNAP-23 and syntaxin-2 or -4.","definition_xrefs":["PMID:19450911","GOC:bhm","PMID:12130530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"platelet SNARE complex","termid":"GO:0097654"}


id: PBO:0051990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 2","termid":"PBO:0051990"}


id: GO:0018350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an ester group to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein esterification (obsolete GO:0018350)","synonyms":[{"name":"protein amino acid esterification","type":"exact"}],"termid":"GO:0018350"}


id: GO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intercellular bridge","termid":"GO:0045171"}


id: GO:0140227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by serotonin binding to a seratonin receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex. Ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:25392484","PMID:27764665","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"ligand-gated ion channel signaling pathway","termid":"GO:1990806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"serotonin-gated cation-selective signaling pathway","synonyms":[{"name":"5-HT-gated cation-selective signaling pathway","type":"exact"},{"name":"5-HT-gated cation-selective signalling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signaling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signalling pathway","type":"exact"},{"name":"serotonin-gated cation-selective signalling pathway","type":"exact"}],"termid":"GO:0140227"}


id: GO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in somitogenesis (obsolete GO:0090236)","termid":"GO:0090236"}


id: PBO:0052766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 58","termid":"PBO:0052766"}


id: GO:0140195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140195)","termid":"GO:0140195"}


id: PBO:0055894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14B","termid":"PBO:0055894"}


id: FYPO:0003631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which U2-type prespliceosome assembly is decreased. The U2-type prespliceosome is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP, and also contains other proteins.","definition_xrefs":["GO:0071004","GO:1903241","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased U2-type prespliceosome assembly","synonyms":[{"name":"decreased U2-type prespliceosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased U2-type prespliceosome assembly during vegetative growth","type":"exact"},{"name":"reduced U2-type prespliceosome assembly","type":"exact"}],"termid":"FYPO:0003631"}


id: PBO:0073015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit delta","termid":"PBO:0073015"}


id: GO:1990063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. In E. coli it is composed of BamABCDE, of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE. BamA interacts directly with BamB and the BamCDE subcomplex.","definition_xrefs":["PMID:20378773","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"periplasmic side of cell outer membrane","termid":"GO:0031241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Bam protein complex","synonyms":[{"name":"OMP complex","type":"exact"}],"termid":"GO:1990063"}


id: GO:0019566
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97344,91934,91196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabinose, arabino-pentose. L-Arabinose occurs both free, for example in the heartwood of many conifers, and in the combined state, as a constituent of plant hemicelluloses, bacterial polysaccharides etc. D-arabinose is a constituent of arabinonucleosides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arabinose metabolism","type":"exact"}],"termid":"GO:0019566","terms_by_termid":{"GO:0019568":null}}


id: PBO:0079955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP6NL antisense RNA 1","termid":"PBO:0079955"}


id: GO:1990874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell proliferation","synonyms":[{"name":"VSMC proliferation","type":"exact"},{"name":"vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1990874"}


id: GO:2000381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of mesoderm development","termid":"GO:2000380"},{"relation_name":"negatively_regulates","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesoderm development","termid":"GO:2000381"}


id: PR:O13938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C23H3.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.04","synonyms":[{"name":"Spom972h-SPAC23H3.04","type":"exact"}],"termid":"PR:O13938"}


id: PBO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe PNuts","termid":"PBO:0018195"}


id: GO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methanol catabolic process","synonyms":[{"name":"methanol breakdown","type":"exact"},{"name":"methanol catabolism","type":"exact"},{"name":"methanol degradation","type":"exact"}],"termid":"GO:0046170"}


id: GO:0002134
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87057,87855],"is_not":false,"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to UTP, uridine 5'-triphosphate.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002134","terms_by_termid":{"GO:0002134":null}}


id: PBO:0046725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 5","termid":"PBO:0046725"}


id: PBO:0045930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member D1","termid":"PBO:0045930"}


id: GO:0014066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of signal transduction mediated by the phosphatidylinositol 3-kinase cascade.","definition_xrefs":["GOC:ef"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidylinositol 3-kinase signaling (obsolete GO:0014066)","synonyms":[{"name":"regulation of PI 3-kinase cascade","type":"related"},{"name":"regulation of PI3K cascade","type":"exact"},{"name":"regulation of phosphatidylinositol 3-kinase cascade","type":"related"},{"name":"regulation of phosphoinositide 3-kinase cascade","type":"exact"}],"termid":"GO:0014066"}


id: PBO:0087522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of holo-CPF; holo-CPF is a multiprotein complex and functional homolog of mammalian CPSF, required for the cleavage and polyadenylation of mRNA and snoRNA 3' ends; involved in pre-tRNA processing; binds to the phosphorylated CTD of RNAPII","termid":"PBO:0087522"}


id: GO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast differentiation","termid":"GO:0045670"}


id: PBO:0063077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase gamma","termid":"PBO:0063077"}


id: FYPO:0005923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in subtelomeric regions is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level in chromatin","termid":"FYPO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased H2A.Z level at subtelomere","synonyms":[{"name":"H2A.Z accumulation at subtelomere","type":"exact"},{"name":"increased H2A.Z level at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased H2A.Z level at subtelomere during vegetative growth","type":"exact"},{"name":"increased H2A.Z level in chromatin at subtelomere","type":"exact"}],"termid":"FYPO:0005923"}


id: PR:O14000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionyl-tRNA synthetase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11946:SF1","OMA:SCHPO01668","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.06c","secondary_identifiers":["UniProtKB:O14000"],"synonyms":[{"name":"MtMetRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MARS2","type":"exact"},{"name":"mitochondrial methionyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14000"}


id: PBO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pop3","termid":"PBO:0003715"}


id: MOD:00674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxyl group with a carboxamido group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidated residue","termid":"MOD:00674"}


id: PBO:0090808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase / phosphopantothenoylcysteine decarboxylase / protein phosphatase inhibitor moonlighting protein Hal3/Tds1","termid":"PBO:0090808"}


id: FYECO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using hydroxyurea and subsequently released from the block.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HU block and release","termid":"FYECO:0000260"}


id: GO:1902168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catechin stimulus.","definition_xrefs":["GOC:rjd","GOC:TermGenie","PMID:23516620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to catechin","termid":"GO:1902168"}


id: PBO:0065424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 9","termid":"PBO:0065424"}


id: PBO:0002745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, human ZNF593 ortholog","termid":"PBO:0002745"}


id: FYPO:0004425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein threonine phosphorylation (obsolete FYPO:0004425)","synonyms":[{"name":"abolished peptidyl-threonine phosphorylation","type":"exact"},{"name":"protein threonine phosphorylation abolished","type":"exact"}],"termid":"FYPO:0004425"}


id: GO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"regulates","term_name":"arginine metabolic process","termid":"GO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of arginine metabolic process","synonyms":[{"name":"regulation of arginine metabolism","type":"exact"}],"termid":"GO:0000821"}


id: PBO:0064253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A2","termid":"PBO:0064253"}


id: GO:0003692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"left-handed Z-DNA binding","termid":"GO:0003692"}


id: PBO:0091620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase","termid":"PBO:0091620"}


id: GO:0071625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior in which an organism produces sounds by a mechanism involving its respiratory system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vocalization behavior","synonyms":[{"name":"vocalisation behaviour","type":"exact"}],"termid":"GO:0071625"}


id: GO:0050829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-negative bacterium","synonyms":[{"name":"Gram-negative antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-negative bacteria","type":"exact"},{"name":"defence response to Gram-negative bacterium","type":"exact"},{"name":"defense response to Gram-negative bacteria","type":"exact"}],"termid":"GO:0050829"}


id: PBO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calicin","termid":"PBO:0042133"}


id: PBO:0078368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 12-1","termid":"PBO:0078368"}


id: PBO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polysaccharide_level","termid":"PBO:0031149"}


id: GO:0110157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular complex that binds lipoprotein receptors VLDLR and APOER2, cadherin-related neuronal receptors (CNRs) or alpha3beta1 integrin and induces various downstream, reelin-dependent, phosphorylation cascades. It ultimately affects polarization, differentiation, neuronal migration and layer formation in the embryonic brain and neuron growth, maturation, and synaptic activity in the postnatal and adult brain.","definition_xrefs":["GOC:bhm","PMID:28887403","PMID:21844191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"reelin complex","termid":"GO:0110157"}


id: PBO:0005618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf16","termid":"PBO:0005618"}


id: GO:0071710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a macromolecule destined to form part of a membrane in a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"membrane macromolecule biosynthetic process","synonyms":[{"name":"membrane macromolecule anabolism","type":"exact"},{"name":"membrane macromolecule biosynthesis","type":"exact"},{"name":"membrane macromolecule formation","type":"exact"},{"name":"membrane macromolecule synthesis","type":"exact"}],"termid":"GO:0071710"}


id: SO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant found within only speficic populations.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population_specific_variant","synonyms":[{"name":"population specific variant","type":"exact"}],"termid":"SO:0001780"}


id: SO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding regions of DNA that precede the sequence that codes for the ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_spacer_region","termid":"SO:0000638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external_transcribed_spacer_region","synonyms":[{"name":"external transcribed spacer region","type":"exact"}],"termid":"SO:0000640"}


id: GO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracytoplasmic membrane-bounded compartment in anaerobic ammonium oxidation (anammox) bacteria, is the site of anammox catabolism.","definition_xrefs":["PMID:17993524","PMID:19682260","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"anammoxosome","termid":"GO:0044222"}


id: SO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glutamic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_glutamic_acid","secondary_identifiers":["MOD:00906"],"synonyms":[{"name":"ModGlu","type":"exact"},{"name":"modified L glutamic acid","type":"exact"},{"name":"modified L-glutamic acid","type":"exact"}],"termid":"SO:0001391"}


id: GO:1900765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"emericellin metabolic process","termid":"GO:1900764"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"emericellin catabolic process","synonyms":[{"name":"Variecoxanthone B breakdown","type":"related"},{"name":"Variecoxanthone B catabolic process","type":"related"},{"name":"Variecoxanthone B catabolism","type":"related"},{"name":"Variecoxanthone B degradation","type":"related"},{"name":"emericellin breakdown","type":"exact"},{"name":"emericellin catabolism","type":"exact"},{"name":"emericellin degradation","type":"exact"}],"termid":"GO:1900765"}


id: GO:1904252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"negatively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of bile acid metabolic process","synonyms":[{"name":"down regulation of bile acid metabolic process","type":"exact"},{"name":"down regulation of bile acid metabolism","type":"exact"},{"name":"down-regulation of bile acid metabolic process","type":"exact"},{"name":"down-regulation of bile acid metabolism","type":"exact"},{"name":"downregulation of bile acid metabolic process","type":"exact"},{"name":"downregulation of bile acid metabolism","type":"exact"},{"name":"inhibition of bile acid metabolic process","type":"narrow"},{"name":"inhibition of bile acid metabolism","type":"narrow"},{"name":"negative regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904252"}


id: FYPO:0004547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to mitochondrion","synonyms":[{"name":"increased protein localisation to mitochondrion","type":"exact"},{"name":"increased protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"increased protein localization to mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0004547"}


id: PR:Q09729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rod1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain-containing protein C31A2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.12","synonyms":[{"name":"Spom972h-rod1","type":"exact"}],"termid":"PR:Q09729"}


id: PBO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/U2 snRNA pseudouridine synthase Lsp1","termid":"PBO:0110166"}


id: PBO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 1 chain","termid":"PBO:0043550"}


id: PBO:0075984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staufen double-stranded RNA binding protein 1","termid":"PBO:0075984"}


id: GO:0048055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R2 and R5 pair of photoreceptors in the eye over time, from their formation to the mature structures. R2 and R5 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R2/R5 cell differentiation","termid":"GO:0048054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 development","termid":"GO:0048055"}


id: GO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of rhombomere 5 are generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 5 development","termid":"GO:0021571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}


id: GO:0044675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of four polypeptides which also contains tungsten, a molybdopterin guanine dinucleotide, and iron-sulfur clusters. This protein complex catalyzes the reversible conversion of CO2 and methanofuran to formylmethanofuran during methanogenesis.","definition_xrefs":["PMID:8575452","PMID:8125106","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"formyl-methanofuran dehydrogenase (tungsten enzyme) complex","termid":"GO:0044675"}


id: GO:1903270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24923804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"regulates","term_name":"cytoplasmic translational elongation through polyproline stretches","termid":"GO:0097622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic translational elongation through polyproline stretches","termid":"GO:1903270"}


id: PBO:0049679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta","termid":"PBO:0049679"}


id: PBO:0028482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_mononucleate_cell_with_elongated_germ_tube","termid":"PBO:0028482"}


id: GO:0032881
data:
  {"annotated_genes":["SJAG_02278","SJAG_01787","SJAG_04509","SJAG_04668","SJAG_00610","SJAG_01376","SJAG_03705","SJAG_00424","SJAG_00963","SJAG_04462","SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87129,77877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[88601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[88604,83750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[84130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[88590,99019,101510,114037,86971,88606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[88610,99021,91114,85649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032881","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0060635":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0042490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12 pseudogene 3","termid":"PBO:0042490"}


id: GO:0021567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 1 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 development","termid":"GO:0021567"}


id: GO:0046524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + D-fructose 6-phosphate = UDP + sucrose 6-phosphate.","definition_xrefs":["EC:2.4.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"sucrose-phosphate synthase activity","secondary_identifiers":["RHEA:22172","MetaCyc:SUCROSE-PHOSPHATE-SYNTHASE-RXN"],"synonyms":[{"name":"SPS","type":"related"},{"name":"UDP-glucose-fructose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:D-fructose-6-phosphate 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-fructose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-fructose-6-phosphate 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"sucrose 6-phosphate synthase activity","type":"related"},{"name":"sucrose phosphate synthetase activity","type":"related"},{"name":"sucrose phosphate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"sucrosephosphate-UDP glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-fructose phosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0046524"}


id: PBO:0039754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 5","termid":"PBO:0039754"}


id: GO:1904870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to Cajal body.","definition_xrefs":["GOC:TermGenie","GOC:BHF_telomere","PMID:25467444","GOC:BHF","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to Cajal body","termid":"GO:1904869"},{"relation_name":"negatively_regulates","term_name":"protein localization to Cajal body","termid":"GO:1904867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to Cajal body","synonyms":[{"name":"down regulation of protein localisation in Cajal body","type":"exact"},{"name":"down regulation of protein localisation to Cajal body","type":"exact"},{"name":"down regulation of protein localization in Cajal body","type":"exact"},{"name":"down regulation of protein localization to Cajal body","type":"exact"},{"name":"down-regulation of protein localisation in Cajal body","type":"exact"},{"name":"down-regulation of protein localisation to Cajal body","type":"exact"},{"name":"down-regulation of protein localization in Cajal body","type":"exact"},{"name":"down-regulation of protein localization to Cajal body","type":"exact"},{"name":"downregulation of protein localisation in Cajal body","type":"exact"},{"name":"downregulation of protein localisation to Cajal body","type":"exact"},{"name":"downregulation of protein localization in Cajal body","type":"exact"},{"name":"downregulation of protein localization to Cajal body","type":"exact"},{"name":"inhibition of protein localisation in Cajal body","type":"narrow"},{"name":"inhibition of protein localisation to Cajal body","type":"narrow"},{"name":"inhibition of protein localization in Cajal body","type":"narrow"},{"name":"inhibition of protein localization to Cajal body","type":"narrow"},{"name":"negative regulation of protein localisation in Cajal body","type":"exact"},{"name":"negative regulation of protein localisation to Cajal body","type":"exact"},{"name":"negative regulation of protein localization in Cajal body","type":"exact"}],"termid":"GO:1904870"}


id: PBO:0040503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase C","termid":"PBO:0040503"}


id: GO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fucose, the pentose 6-deoxygalactose.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fucose binding","termid":"GO:0042806"}


id: GO:0099072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the the local concentration of neurotransmitter receptor at the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"}


id: GO:0032448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA region containing a hairpin. A hairpin structure forms when a DNA strand folds back on itself and intrachain base pairing occurs between inverted repeat sequences.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA hairpin binding","termid":"GO:0032448"}


id: GO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host organism cuticle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cuticle","synonyms":[{"name":"catabolism of host cuticle","type":"exact"},{"name":"degradation of host cuticle","type":"related"},{"name":"disassembly by symbiont of host cuticle","type":"related"},{"name":"https://github.com/geneontology/go-ontology/issues/24127","type":"related"}],"termid":"GO:0085044"}


id: SO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA_gene","termid":"SO:0002366"}


id: PBO:0038487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 3","termid":"PBO:0038487"}


id: FYPO:0001544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfur measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular sulfur level","synonyms":[{"name":"normal cellular sulfur accumulation","type":"related"},{"name":"normal cellular sulfur level during mitotic cell cycle","type":"related"},{"name":"normal cellular sulfur level during vegetative growth","type":"exact"},{"name":"normal cellular sulphur level","type":"exact"}],"termid":"FYPO:0001544"}


id: PBO:0089930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb2","termid":"PBO:0089930"}


id: FYPO:0000646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"swollen vegetative cell","synonyms":[{"name":"enlarged vegetative cell","type":"related"},{"name":"increased vegetative cell size","type":"related"},{"name":"increased vegetative cell volume","type":"exact"},{"name":"large vegetative cell","type":"related"}],"termid":"FYPO:0000646"}


id: FYPO:0003579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during one or both meiotic nuclear divisions is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during meiotic cell cycle","termid":"FYPO:0006976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during meiosis","synonyms":[{"name":"normal RNA accumulation during meiosis","type":"related"},{"name":"normal RNA level during meiotic nuclear division","type":"exact"},{"name":"normal cellular RNA level during meiosis","type":"exact"},{"name":"normal mRNA level during meiosis","type":"narrow"},{"name":"normal transcript level during meiosis","type":"exact"}],"termid":"FYPO:0003579"}


id: PBO:0068577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 28, pseudogene","termid":"PBO:0068577"}


id: FYPO:0006640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"abnormal protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"abnormal protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006640"}


id: PBO:0090720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic ATP-dependent RNA helicase Dbp5","termid":"PBO:0090720"}


id: PBO:0062860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otospiralin","termid":"PBO:0062860"}


id: PBO:0030136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_S_phase","termid":"PBO:0030136"}


id: PATO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's ability to hold an electrical charge.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capacitance","termid":"PATO:0002205"}


id: PBO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 27","termid":"PBO:0072150"}


id: PBO:0066108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASGRF2 antisense RNA 1","termid":"PBO:0066108"}


id: GO:0016544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect taps the female with his frontal leg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, tapping to detect pheromone","synonyms":[{"name":"male courtship behavior, tapping","type":"related"},{"name":"male courtship behaviour, tapping","type":"exact"},{"name":"male courtship behaviour, tapping to detect pheromone","type":"related"}],"termid":"GO:0016544"}


id: PBO:0057766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2110","termid":"PBO:0057766"}


id: PBO:0085793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; completely overlaps the verified gene SLM1; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; mRNA identified as translated by ribosome profiling data","termid":"PBO:0085793"}


id: PR:O94395
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An X-ray repair cross-complementing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04947","PANTHER:PTHR12604:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase II subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.02c","secondary_identifiers":["UniProtKB:O94395"],"synonyms":[{"name":"ATP-dependent DNA helicase II subunit Ku70 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRCC6","type":"exact"}],"termid":"PR:O94395"}


id: FYPO:0001300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oleoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000707","FYPO:0001985","FYPO:0000002","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal oleoyl-CoA ligase activity","synonyms":[{"name":"abnormal oleoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001300"}


id: PBO:0028807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028807"}


id: GO:0046538
data:
  {"annotated_genes":["SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91192],"is_not":false,"summary":null,"term":"GO:0046538"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction mechanism uses 2,3-bisphosphoglycerate as a phosphate donor.","definition_xrefs":["EC:5.4.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoglycerate mutase activity","termid":"GO:0004619"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01516","MetaCyc:RXN-15513"],"synonyms":[{"name":"glycerate phosphomutase (diphosphoglycerate cofactor) activity","type":"related"}],"termid":"GO:0046538","terms_by_termid":{"GO:0046538":null}}


id: GO:0071881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"related"}],"termid":"GO:0071881"}


id: GO:0010124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylacetate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"phenylacetate catabolic process","secondary_identifiers":["MetaCyc:PWY0-321"],"synonyms":[{"name":"phenylacetate breakdown","type":"exact"},{"name":"phenylacetate catabolism","type":"exact"},{"name":"phenylacetate degradation","type":"exact"}],"termid":"GO:0010124"}


id: PBO:0058765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6889","termid":"PBO:0058765"}


id: GO:0038035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the receptor constitutively activates adenylate cyclase, without binding to an agonist.","definition_xrefs":["PMID:12402500","PMID:17629961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"signal transduction in absence of ligand","termid":"GO:0038034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"G protein-coupled receptor signaling in absence of ligand","type":"broad"},{"name":"G-protein coupled receptor signaling in absence of agonist","type":"broad"},{"name":"G-protein coupled receptor signaling in absence of ligand","type":"broad"},{"name":"G-protein coupled receptor signalling in absence of ligand","type":"broad"},{"name":"basal G-protein coupled receptor signaling","type":"narrow"}],"termid":"GO:0038035"}


id: PBO:0071861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3","termid":"PBO:0071861"}


id: GO:0036080
data:
  {"annotated_genes":["SJAG_00339","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[85195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine nucleotide-sugar from one side of a membrane to the other. Purine nucleotide-sugars are purine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["GOC:sart","PMID:19948734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar transmembrane transporter activity","termid":"GO:0005338"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"purine nucleotide-sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036080","terms_by_termid":{"GO:0005457":null,"GO:0005458":null}}


id: PBO:0076915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 gamma","termid":"PBO:0076915"}


id: PBO:0030477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_serine_level","termid":"PBO:0030477"}


id: GO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cytokine-mediated signaling pathway","synonyms":[{"name":"regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"regulation of cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0001959"}


id: FYPO:0001425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in complete rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete re-replication","type":"exact"},{"name":"complete mitotic DNA re-replication","type":"related"},{"name":"complete mitotic DNA rereplication","type":"related"},{"name":"endoreduplication","type":"related"},{"name":"endoreplication","type":"related"},{"name":"increased spontaneous diploidization","type":"related"}],"termid":"FYPO:0001425"}


id: PBO:0082414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional chorismate synthase and flavin reductase; catalyzes the conversion of 5-enolpyruvylshikimate 3-phosphate (EPSP) to form chorismate, which is a precursor to aromatic amino acids; protein abundance increases in response to DNA replication stress","termid":"PBO:0082414"}


id: PBO:0078465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-3","termid":"PBO:0078465"}


id: PBO:0059046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA mutase","termid":"PBO:0059046"}


id: GO:1900866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycolate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycolate transport","termid":"GO:1900866"}


id: PBO:0051194
data:
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id: PBO:0064895
data:
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id: GO:0018303
data:
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id: PBO:0083372
data:
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id: GO:0141188
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id: FYPO:0003153
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during cellular response to heat","synonyms":[{"name":"normal protein accumulation during cellular response to heat","type":"related"},{"name":"normal protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003153"}


id: PBO:0065055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 9","termid":"PBO:0065055"}


id: GO:0015276
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92167,105561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ligand-gated monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-451310","Reactome:R-HSA-622326","Reactome:R-HSA-629595","Reactome:R-HSA-622325","Reactome:R-HSA-451311"],"synonyms":[{"name":"ionotropic receptor activity","type":"narrow"},{"name":"ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0015276","terms_by_termid":{"GO:0005227":null}}


id: PBO:0079258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 29","termid":"PBO:0079258"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: GO:0070059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to a stimulus indicating endoplasmic reticulum (ER) stress, and ends when the execution phase of apoptosis is triggered. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["PMID:18701708","GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","synonyms":[{"name":"ER stress-induced apoptosis","type":"exact"},{"name":"apoptosis in response to ER stress","type":"exact"},{"name":"apoptosis in response to endoplasmic reticulum stress","type":"broad"},{"name":"apoptosis triggered by ER stress","type":"exact"},{"name":"endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0070059"}


id: GO:0043029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell homeostasis","synonyms":[{"name":"T lymphocyte homeostasis","type":"exact"},{"name":"T-cell homeostasis","type":"exact"},{"name":"T-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0043029"}


id: PBO:0091196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys","termid":"PBO:0091196"}


id: GO:1905118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribonucleoside-diphosphate reductase activity.","definition_xrefs":["GOC:bhm","GO_REF:0000059","PMID:24733891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of ribonucleoside-diphosphate reductase activity","termid":"GO:1905117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ribonucleoside-diphosphate reductase activity","synonyms":[{"name":"activation of RNR","type":"related"},{"name":"activation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"activation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"activation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"activation of class I ribonucleotide reductase activity","type":"related"},{"name":"activation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"activation of class II ribonucleotide reductase activity","type":"related"},{"name":"activation of class III ribonucleotide reductase activity","type":"related"},{"name":"activation of nucleoside diphosphate reductase activity","type":"related"},{"name":"activation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"activation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"activation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"activation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"positive regulation of RNR","type":"related"},{"name":"positive regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"positive regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"positive regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"positive regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"positive regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"positive regulation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"up regulation of RNR","type":"related"},{"name":"up regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"up regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"up regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"up regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"up regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"up regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"up regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"up regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"up regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"up regulation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up regulation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"up-regulation of RNR","type":"related"},{"name":"up-regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up-regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"up-regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"up-regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"up-regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"up-regulation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"up-regulation of ribonucleotide diphosphate reductase activity","type":"related"},{"name":"upregulation of RNR","type":"related"},{"name":"upregulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"upregulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"upregulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"upregulation of class I ribonucleotide reductase activity","type":"related"},{"name":"upregulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"upregulation of class II ribonucleotide reductase activity","type":"related"},{"name":"upregulation of class III ribonucleotide reductase activity","type":"related"},{"name":"upregulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"upregulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"upregulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"upregulation of ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"upregulation of ribonucleotide diphosphate reductase activity","type":"related"}],"termid":"GO:1905118"}


id: FYPO:0002084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell has a larger volume and cell diameter, but shorter cell length, than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"swollen stubby vegetative cell","synonyms":[{"name":"enlarged stubby cell","type":"related"},{"name":"large stubby cell","type":"related"},{"name":"stubby cell with increased cell size","type":"related"},{"name":"stubby cell with increased cell volume","type":"exact"},{"name":"swollen watermelon-shaped cell","type":"exact"}],"termid":"FYPO:0002084"}


id: GO:0021590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellum to attain its fully functional state. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"hindbrain maturation","termid":"GO:0021578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum maturation","termid":"GO:0021590"}


id: GO:0170007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a lipid droplet with an endoplasmic reticulum membrane, via membrane lipid binding, to establish membrane contact sites and mediate exchange and communication.","definition_xrefs":["PMID:35389430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"endoplasmic reticulum-lipid droplet tether activity","termid":"GO:0170007"}


id: PBO:0075185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 2","termid":"PBO:0075185"}


id: GO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization that results in the directional division of a growth plate cartilage chondrocyte.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte division","termid":"GO:0003423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in growth plate cartilage chondrocyte division","synonyms":[{"name":"growth plate cartilage chondrocyte polarization","type":"related"}],"termid":"GO:0003424"}


id: PBO:0004506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter Liz1","termid":"PBO:0004506"}


id: GO:1904565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-oleoyl-sn-glycerol 3-phosphate stimulus.","definition_xrefs":["PMID:12139919","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 1-oleoyl-sn-glycerol 3-phosphate","synonyms":[{"name":"response to 1-oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to LPA","type":"exact"},{"name":"response to lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl lysophosphatidic acid","type":"exact"},{"name":"response to oleoyl-L-alpha-lysophosphatidic acid","type":"exact"}],"termid":"GO:1904565"}


id: FYPO:0001253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, has three or more nuclei and two or more septa, and the septa are not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei","secondary_identifiers":["FYPO:0005056"],"synonyms":[{"name":"elongated multinucleate multiseptate cell, single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei during mitotic cell cycle","type":"related"},{"name":"elongated multiseptate cell, with three or more nuclei and single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001253"}


id: PBO:0035973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_rDNA_during_vegetative_growth","termid":"PBO:0035973"}


id: PBO:0077232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 8","termid":"PBO:0077232"}


id: GO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structure or activity","termid":"GO:0050803"}


id: GO:0140430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a chromosome passenger complex localization to kinetochore.","definition_xrefs":["PMID:20739936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to kinetochore","termid":"GO:1905342"},{"relation_name":"positively_regulates","term_name":"chromosome passenger complex localization to kinetochore","termid":"GO:0072356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome passenger complex localization to kinetochore","termid":"GO:0140430"}


id: PBO:0039257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 6 family member A1","termid":"PBO:0039257"}


id: PBO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.4","termid":"PBO:0001198"}


id: PBO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective entrance Into Mitosis","termid":"PBO:0018148"}


id: PBO:0045214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C7","termid":"PBO:0045214"}


id: PBO:0085937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA transcribed as part of a bicistronic transcript with a predicted transcriptional repressor RGM1/YMR182C; mRNA is destroyed by nonsense-mediated decay (NMD); not an essential gene; YMR181C has a paralog, YPL229W, that arose from the whole genome duplication","termid":"PBO:0085937"}


id: GO:0047365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,3'-disulfate.","definition_xrefs":["EC:2.8.2.26","RHEA:22504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quercetin-3-sulfate 3'-sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.26-RXN","KEGG_REACTION:R02632"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"3'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 3'-sulfotransferase activity","type":"related"},{"name":"flavonol 3'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 3'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047365"}


id: GO:0018715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-phenanthrol + UDP-glucuronate = 9-phenanthryl-beta-D-glucuronide + UDP.","definition_xrefs":["UM-BBD_reactionID:r0567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"9-phenanthrol UDP-glucuronosyltransferase activity","termid":"GO:0018715"}


id: GO:0008981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protease IV activity (obsolete GO:0008981)","synonyms":[{"name":"protease IV activity","type":"exact"}],"termid":"GO:0008981"}


id: GO:0009666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the outer membrane of a plastid.","definition_xrefs":["GOC:mah","GOC:dph","GOC:ai","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plastid outer membrane organization","synonyms":[{"name":"plastid outer membrane organisation","type":"exact"},{"name":"plastid outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0009666"}


id: FYPO:0003969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a mitotic spindle in an abnormal location. The normal location is centered at the midpoint of, and parallel to, the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000120","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"mislocalized mitotic spindle","synonyms":[{"name":"mislocalised mitotic spindle","type":"exact"},{"name":"mislocalized mitotic spindle during vegetative growth","type":"exact"},{"name":"mislocalized spindle during mitosis","type":"exact"},{"name":"mislocalized spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003969"}


id: PBO:0084249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD3 has a paralog, IMD4, that arose from the whole genome duplication","termid":"PBO:0084249"}


id: FYPO:0005961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a meiotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PomBase:mah","PMID:15992541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"multipolar meiotic spindle","synonyms":[{"name":"multipolar meiotic spindles","type":"exact"},{"name":"multipolar spindle during meiosis","type":"exact"}],"termid":"FYPO:0005961"}


id: PBO:0011142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase (predicted)","termid":"PBO:0011142"}


id: PBO:0027300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_primary_amine_oxidase_activity","termid":"PBO:0027300"}


id: PBO:0055585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3021","termid":"PBO:0055585"}


id: PBO:0005497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major transcript in 972 h- is non functional as it contains a stop codon","termid":"PBO:0005497"}


id: PATO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000430 unique (obsolete PATO:0000430)","termid":"PATO:0000430"}


id: PBO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40 pseudogene 1","termid":"PBO:0044989"}


id: PBO:0089417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, implicated in microtubule stabilization (yeast), and heme biosynthesis (mouse)","termid":"PBO:0089417"}


id: PBO:0040102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARVCF delta catenin family member","termid":"PBO:0040102"}


id: PBO:0065274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 35","termid":"PBO:0065274"}


id: MOD:01890
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-formyl-L-methionine residue and an L-histidine residue to form N-[(L-histidin-1'-yl)methyl]-L-methionine.","definition_xrefs":["RESID:AA0566#FMET","PubMed:19622680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked N-formyl-L-methionine residue","termid":"MOD:02062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet)","synonyms":[{"name":"(2S)-2-([(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)methyl]amino)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine","type":"exact"}],"termid":"MOD:01890"}


id: GO:1902156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to G1 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA damage checkpoint signaling","termid":"GO:1902154"},{"relation_name":"is_a","term_name":"regulation of response to G1 DNA damage checkpoint signaling","termid":"GO:1902155"},{"relation_name":"positively_regulates","term_name":"response to G1 DNA damage checkpoint signaling","termid":"GO:0072432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"activation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to G1 DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"activation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"positive regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"positive regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"up regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"up-regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"upregulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to G1 DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902156"}


id: PBO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 34","termid":"PBO:0044349"}


id: PBO:0061923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 12, pseudogene","termid":"PBO:0061923"}


id: PBO:0067152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 202, pseudogene","termid":"PBO:0067152"}


id: PBO:0058903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12121","termid":"PBO:0058903"}


id: GO:0016507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that includes the long-chain 3-hydroxyacyl-CoA dehydrogenase and long-chain enoyl-CoA hydratase activities in two subunits (alpha and beta), catalyzing two steps of the fatty acid beta-oxidation cycle within the mitochondrial matrix.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation multienzyme complex","termid":"GO:0036125"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial fatty acid beta-oxidation multienzyme complex","synonyms":[{"name":"fatty acid beta-oxidation multienzyme complex","type":"broad"},{"name":"trifunctional enzyme","type":"related"}],"termid":"GO:0016507"}


id: PBO:0091392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, LTR proximal","termid":"PBO:0091392"}


id: FYPO:0006652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a DNA/DNA annealing activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA/DNA annealing activity","termid":"FYPO:0005438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000653","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased DNA/DNA annealing activity","termid":"FYPO:0006652"}


id: GO:0050792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the viral life cycle, the set of processes by which a virus reproduces and spreads among hosts.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral process","synonyms":[{"name":"regulation of viral reproduction","type":"narrow"}],"termid":"GO:0050792"}


id: GO:0140271
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[110349,113353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The directed movement of hexose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"},{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"hexose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140271","terms_by_termid":{"GO:0098708":null,"GO:0140425":null}}


id: PBO:0040919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 23","termid":"PBO:0040919"}


id: GO:0033529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of raffinose, the trisaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"raffinose metabolic process","termid":"GO:0033530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"raffinose biosynthetic process","synonyms":[{"name":"raffinose anabolism","type":"exact"},{"name":"raffinose biosynthesis","type":"exact"},{"name":"raffinose formation","type":"exact"},{"name":"raffinose synthesis","type":"exact"}],"termid":"GO:0033529"}


id: GO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-hydroxyproline from one side of a membrane to the other.","definition_xrefs":["PMID:14502423","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-hydroxyproline transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-6784213"],"synonyms":[{"name":"4-hydroxyproline transmembrane transporter activity","type":"broad"}],"termid":"GO:0034590"}


id: PR:000085731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:19362535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9),UnPhos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"Spom-hht3/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"hht3/Me(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085731"}


id: GO:0035191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise asymmetric spreading out of nuclei internally along the anterior-posterior axis of the developing insect embryo during mitotic cycles 4 to 6. This movement leads to the distribution of nuclei in a hollow ellipsoid underlying the cortex.","definition_xrefs":["PMID:8314839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytial nuclear migration","termid":"GO:0035190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nuclear axial expansion","synonyms":[{"name":"nuclear distribution along anterior-posterior axis","type":"exact"},{"name":"nucleus distribution along anterior-posterior axis","type":"exact"}],"termid":"GO:0035191"}


id: PBO:0036118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_modification_during_vegetative_growth","termid":"PBO:0036118"}


id: GO:2000439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"positively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte extravasation","termid":"GO:2000439"}


id: PBO:0036376
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLUtamate requiring","termid":"PBO:0036376"}


id: FYPO:0006303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:1903478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring","termid":"FYPO:0002699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000032","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006303"}


id: PBO:0039886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 3","termid":"PBO:0039886"}


id: PBO:0028639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_sister_chromatid_cohesion_during_prophase_I","termid":"PBO:0028639"}


id: GO:0031282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of guanylate cyclase activity","termid":"GO:0031282"}


id: PBO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_size","termid":"PBO:0030679"}


id: GO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C5a product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0781735149","GOC:pg","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C5a receptor activity","secondary_identifiers":["GO:0004944"],"synonyms":[{"name":"C5a anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004878"}


id: GO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a dendritic cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell activation","termid":"GO:0001773"}


id: GO:0045521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-25 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-25 receptor binding","synonyms":[{"name":"IL-25","type":"narrow"},{"name":"interleukin-25 receptor ligand","type":"narrow"}],"termid":"GO:0045521"}


id: PBO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein, Erd1 homolog, required for glycosylation and ER retention Erd1/Gmn2","termid":"PBO:0090647"}


id: PBO:0084846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homolog of prokaryotic L29 ribosomal protein; located at the ribosomal tunnel exit","termid":"PBO:0084846"}


id: GO:0030246
data:
  {"annotated_genes":["SJAG_01991","SJAG_03824","SJAG_00981","SJAG_01858","SJAG_00667","SJAG_04495","SJAG_04334","SJAG_02839","SJAG_03535","SJAG_00605","SJAG_02951","SJAG_04571","SJAG_03818","SJAG_03280","SJAG_00839","SJAG_00530","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67246,83611,83863,83864,89731,92292,92293,97764,97765,109909,109910],"is_not":false,"summary":null,"term":"GO:0030246"},{"annotations":[91889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030248"},{"annotations":[94180,90710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005536"},{"annotations":[114646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001065"},{"annotations":[110508,106936,109951,114647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005537"},{"annotations":[99823,100639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048029"},{"annotations":[96313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030247"}]},"cv_name":"molecular_function","definition":"Binding to a carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_00605":null,"SJAG_00667":null,"SJAG_00839":null,"SJAG_00981":null,"SJAG_01858":null,"SJAG_01991":null,"SJAG_02131":null,"SJAG_02839":null,"SJAG_02951":null,"SJAG_03280":null,"SJAG_03535":null,"SJAG_03818":null,"SJAG_03824":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"carbohydrate binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005529"],"synonyms":[{"name":"selectin","type":"related"},{"name":"sugar binding","type":"exact"}],"termid":"GO:0030246","terms_by_termid":{"GO:0005536":null,"GO:0005537":null,"GO:0030246":null,"GO:0030247":null,"GO:0030248":null,"GO:0048029":null,"GO:2001065":null}}


id: PBO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 1","termid":"PBO:0052129"}


id: GO:0090423
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93197],"is_not":false,"summary":null,"term":"GO:0090423"}]},"cv_name":"biological_process","definition":"A phytochelatin metabolic process in which a metal is incorporated with phytochelatin to form a complex.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phytochelatin-metal complex formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LWM phytochelatin complex formation","type":"related"},{"name":"low molecular weight phytochelatin complex formation","type":"related"}],"termid":"GO:0090423","terms_by_termid":{"GO:0090423":null}}


id: FYPO:0004113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, small cell","synonyms":[{"name":"inviable after spore germination, undivided small cell","type":"exact"},{"name":"inviable following spore germination, without cell division, small cell","type":"exact"},{"name":"inviable germinated spore, without cell division, small cell","type":"exact"},{"name":"lethal after spore germination, without cell division, small cell","type":"exact"}],"termid":"FYPO:0004113"}


id: PR:Q10440
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emi5 gene.","definition_xrefs":["UniProtKB:Q10440","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.06c","synonyms":[{"name":"SDH assembly factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-emi5","type":"exact"}],"termid":"PR:Q10440"}


id: PBO:0080494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VWC2L intronic transcript 1","termid":"PBO:0080494"}


id: PBO:0051323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/ORY-1 (pseudogene)","termid":"PBO:0051323"}


id: FYPO:0003014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring disassembly is decreased. Contractile ring disassembly is the part of cytokinesis in which the actomyosin contractile ring is disaggregated into its constituent components.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring disassembly","termid":"FYPO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of actomyosin contractile ring disassembly","synonyms":[{"name":"decreased rate of actomyosin contractile ring disassembly during mitotic cell cycle","type":"related"},{"name":"decreased rate of actomyosin contractile ring disassembly during vegetative growth","type":"exact"},{"name":"decreased rate of contractile ring disassembly","type":"exact"},{"name":"decreased rate of cytokinetic contractile ring disassembly","type":"exact"},{"name":"decreased rate of mitotic contractile ring disassembly","type":"exact"},{"name":"reduced rate of actomyosin contractile ring disassembly","type":"exact"}],"termid":"FYPO:0003014"}


id: GO:0060385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurite development process that generates a long process of a neuron, as it invades a target tissue.","definition_xrefs":["GOC:dph","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"innervation","termid":"GO:0060384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis involved in innervation","termid":"GO:0060385"}


id: PBO:0066164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 1","termid":"PBO:0066164"}


id: FYPO:0004790
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115304,115300,115301,115302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is abnormal (i.e. greater or less than the distance in wild type cells).","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null},"genotype_count":4,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomere-nuclear envelope distance during vegetative growth","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_01834"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pom152delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal distance between telomeres and nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormal telomere-nuclear envelope distance during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004790","terms_by_termid":{"FYPO:0004890":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0057439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 556","termid":"PBO:0057439"}


id: PATO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000347 sporophyte incompatible value (obsolete PATO:0000347)","termid":"PATO:0000347"}


id: PBO:0083446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ATP14","termid":"PBO:0083446"}


id: PBO:0072855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1B","termid":"PBO:0072855"}


id: GO:0102154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4',6-tetrahydroxydibenzoylmethane + UDP-alpha-D-glucose = 8C-glucosyl-2-hydroxynaringenin + UDP + 2 H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"8C-naringenin dibenzoylmethane tautomer glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11685"],"termid":"GO:0102154"}


id: MOD:01452
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein amino acid O-phosphopantetheine-L-serine with secondary neutral loss of pantetheine resulting in O-phospho-L-serine.","definition_xrefs":["PubMed:17042494","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phosphopantetheine-L-serine with neutral loss of pantetheine","termid":"MOD:01452"}


id: PBO:0074533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA G1","termid":"PBO:0074533"}


id: PBO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent 3' to 5' DNA helicase Ino80","termid":"PBO:0017840"}


id: PBO:0034702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1 (predicted)","termid":"PBO:0034702"}


id: PBO:0108543
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative mRNA processing","termid":"PBO:0108543"}


id: PBO:0064180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XG, pseudogene","termid":"PBO:0064180"}


id: FYPO:0005756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mannosylinositol phosphorylceramide (MIPC) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular mannosylinositol phosphorylceramide level","synonyms":[{"name":"normal cellular MIPC level","type":"exact"},{"name":"normal cellular mannose-inositol-phosphoceramide level","type":"exact"},{"name":"normal cellular mannosylinositol phosphorylceramide accumulation","type":"related"},{"name":"normal cellular mannosylinositol phosphorylceramide level during mitotic cell cycle","type":"related"},{"name":"normal cellular mannosylinositol phosphorylceramide level during vegetative growth","type":"exact"}],"termid":"FYPO:0005756"}


id: PATO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001050 relative susceptibility (obsolete PATO:0001050)","termid":"PATO:0001050"}


id: PBO:0076876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 28","termid":"PBO:0076876"}


id: GO:0090386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome maturation","termid":"GO:0090382"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}


id: FYPO:0006067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, does not occur.","definition_xrefs":["PomBase:mah","PMID:22696680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abolished microtubule polymerization","synonyms":[{"name":"abolished microtubule catastrophe","type":"related"},{"name":"abolished microtubule polymerisation","type":"exact"},{"name":"abolished microtubule polymerization","type":"related"},{"name":"abolished microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abolished microtubule polymerization during vegetative growth","type":"exact"},{"name":"abolished microtubule shrinkage","type":"related"},{"name":"microtubule polymerization abolished","type":"exact"}],"termid":"FYPO:0006067"}


id: PBO:0089561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (Sam37)","termid":"PBO:0089561"}


id: PBO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase(predicted)","termid":"PBO:0004277"}


id: PBO:0049504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 11","termid":"PBO:0049504"}


id: PBO:0111310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"InterPro_version","termid":"PBO:0111310"}


id: CHEBI:44423
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyurea","termid":"CHEBI:44423"}


id: GO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the transfer of a sulfur atom from a free cysteine (in the process converting the free cysteine to alanine) to the peptidyl-cysteine to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of peptidyl-cystine persulfide by sulphur transfer from free cysteine","termid":"GO:0044526"}


id: PBO:0086384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative benzil reductase;(GFP)-fusion protein localizes to the cytoplasm and is induced by the DNA-damaging agent MMS; sequence similarity with short-chain dehydrogenase/reductases; null mutant has increased spontaneous Rad52p foci","termid":"PBO:0086384"}


id: PBO:0074208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 1","termid":"PBO:0074208"}


id: PBO:0108602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-device_utilizes_material","termid":"PBO:0108602"}


id: GO:0008199
data:
  {"annotated_genes":["SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110063],"is_not":false,"summary":null,"term":"GO:0008199"}]},"cv_name":"molecular_function","definition":"Binding to a ferric iron ion, Fe(III).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion binding","termid":"GO:0005506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"ferric iron binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008199","terms_by_termid":{"GO:0008199":null}}


id: PBO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 6","termid":"PBO:0048744"}


id: PBO:0045055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2 like","termid":"PBO:0045055"}


id: GO:0075214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in a symbiont spore during the process of its encystment. Encystment means to enter a state of essentially suspended animation in which the spore is protected by an outer coating and remains immobile and inactive until favorable conditions for growth occur again. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:kmv","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore encystment","synonyms":[{"name":"spore encystment on host","type":"related"}],"termid":"GO:0075214"}


id: PBO:0061887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid binding protein/cell adhesion molecule like","termid":"PBO:0061887"}


id: PBO:0087935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus; Tef2p-RFP levels increase during replicative aging","termid":"PBO:0087935"}


id: GO:0098810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter molecules from the extrasynaptic space into the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter uptake","termid":"GO:0001504"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter reuptake","termid":"GO:0098810"}


id: PBO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 9","termid":"PBO:0060299"}


id: GO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain region that is adjacent to the ventricular cavity.","definition_xrefs":["GOC:cls","GOC:dph","PMID:12593981","GO_REF:0000021","GOC:dgh","PMID:15157725","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}


id: PBO:0075587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 14 (putative)","termid":"PBO:0075587"}


id: PR:000027517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ase1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase spindle elongation protein 1","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"Ase1p","type":"exact"},{"name":"ase1","type":"exact"}],"termid":"PR:000027517"}


id: PBO:0082995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic leucyl tRNA synthetase; ligates leucine to the appropriate tRNA; human homolog LARS can complement yeast temperature-sensitive mutant at restrictive temperature","termid":"PBO:0082995"}


id: PR:Q10251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 5B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00451","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.03","secondary_identifiers":["UniProtKB:Q10251"],"synonyms":[{"name":"Spom972h-EIF5B","type":"exact"},{"name":"eIF-5B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor IF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10251"}


id: GO:0021773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a medium spiny neuron residing in the striatum.","definition_xrefs":["ISBN:0878937420","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron differentiation","termid":"GO:0021879"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striatal medium spiny neuron differentiation","synonyms":[{"name":"medium-sized spiny neuron differentiation","type":"exact"},{"name":"striatal MSN differentiation","type":"exact"}],"termid":"GO:0021773"}


id: GO:0050129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-glutamate + H2O = L-glutamate + formate.","definition_xrefs":["EC:3.5.1.68","RHEA:12476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-formylglutamate deformylase activity","secondary_identifiers":["KEGG_REACTION:R00525","MetaCyc:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN"],"synonyms":[{"name":"N-formyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N-formylglutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidohydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate-hydrolyzing enzyme","type":"related"},{"name":"beta-citrylglutamate amidase activity","type":"related"},{"name":"formylglutamate deformylase activity","type":"related"}],"termid":"GO:0050129"}


id: GO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-methylmalonyl-CoA = (S)-methylmalonyl-CoA.","definition_xrefs":["EC:5.1.99.1","RHEA:20553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylmalonyl-CoA epimerase activity","secondary_identifiers":["KEGG_REACTION:R02765","Reactome:R-HSA-71020","MetaCyc:METHYLMALONYL-COA-EPIM-RXN"],"synonyms":[{"name":"2-methyl-3-oxopropanoyl-CoA 2-epimerase activity","type":"related"},{"name":"DL-methylmalonyl-CoA racemase activity","type":"related"},{"name":"methylmalonyl coenzyme A racemase activity","type":"related"},{"name":"methylmalonyl-CoA 2-epimerase activity","type":"related"},{"name":"methylmalonyl-CoA racemase activity","type":"related"}],"termid":"GO:0004493"}


id: PR:Q9HDW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB2B4.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDW5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0644 protein PB2B4.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.06","synonyms":[{"name":"Spom972h-SPAPB2B4.06","type":"exact"}],"termid":"PR:Q9HDW5"}


id: FYPO:0001937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0002114","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000138","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"}


id: PR:Q10102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.01c","synonyms":[{"name":"Spom972h-SPAC18G6.01c","type":"exact"}],"termid":"PR:Q10102"}


id: PR:O13886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C823.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.02","synonyms":[{"name":"Spom972h-SPAC823.02","type":"exact"}],"termid":"PR:O13886"}


id: PBO:0079283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 2","termid":"PBO:0079283"}


id: FYECO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rapamycin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ rapamycin","synonyms":[{"name":"+ sirolimus","type":"exact"}],"termid":"FYECO:0000242"}


id: PBO:0055517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2951","termid":"PBO:0055517"}


id: PBO:0085406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, putative ammonium transporter; regulation pattern suggests a possible role in export of ammonia from the cell; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family of putative transporters","termid":"PBO:0085406"}


id: PBO:0057963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3684","termid":"PBO:0057963"}


id: GO:0052832
data:
  {"annotated_genes":["SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65165],"is_not":false,"summary":null,"term":"GO:0052832"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol 3-phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol monophosphate phosphatase activity","termid":"GO:0052834"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"inositol monophosphate 3-phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:30739","Reactome:R-HSA-1855210","MetaCyc:MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN"],"termid":"GO:0052832","terms_by_termid":{"GO:0052832":null}}


id: PBO:0080876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yippee like 2","termid":"PBO:0080876"}


id: PATO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow brown","termid":"PATO:0002411"}


id: PBO:0089205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32","termid":"PBO:0089205"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"}],"termid":"GO:0120332"}


id: PBO:0065762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridine nucleotide-disulphide oxidoreductase domain 2","termid":"PBO:0065762"}


id: PBO:0043036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP5 pseudogene 1","termid":"PBO:0043036"}


id: PATO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity of occurrent","termid":"PATO:0001637"}


id: GO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043003)","synonyms":[{"name":"activation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"}],"termid":"GO:0043003"}


id: SO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a signal peptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal_peptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:sig_peptide","type":"exact"},{"name":"Signal peptide region of CDS","type":"exact"}],"termid":"SO:0002251"}


id: SO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse_Hoogsteen_base_pair","synonyms":[{"name":"reverse Hoogsteen base pair","type":"exact"}],"termid":"SO:0000501"}


id: PBO:0082050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase involved in error-free bypass of DNA lesions; binds flap DNA, stimulates activity of Rad27p and Dna2p; prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage; homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks; member of SF2 DExD/H superfamily of helicases; nonsense or missense mutations in FANCM can make people more likely to get cancer","termid":"PBO:0082050"}


id: GO:0050646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"},{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding","synonyms":[{"name":"5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050646"}


id: PR:Q9URY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chloride anion exchanger that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C869.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.05c","secondary_identifiers":["UniProtKB:Q9URY8"],"synonyms":[{"name":"Spom972h-SLC26A3","type":"exact"}],"termid":"PR:Q9URY8"}


id: GO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the facilitated diffusion of urea (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"urea channel activity","secondary_identifiers":["Reactome:R-HSA-507873","Reactome:R-HSA-507875"],"termid":"GO:0015265"}


id: PBO:0053429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 374","termid":"PBO:0053429"}


id: PBO:0027587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion_along_chromosome_arms","termid":"PBO:0027587"}


id: SO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from 5S rRNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5S_SINE_retrotransposon","synonyms":[{"name":"5S SINE element","type":"exact"},{"name":"5S SINE retrotransposon","type":"exact"},{"name":"RSS retrotransposon","type":"exact"}],"termid":"SO:0002276"}


id: GO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-threonine to form peptidyl-O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"peptidyl-threonine sulfation","termid":"GO:0050985"}


id: GO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extended zone of intimate apposition between two cells containing one or more types of intercellular junctions, e.g., the intercalated disk of muscle.","definition_xrefs":["NIF_Subcellular:sao1299635018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell contact zone","synonyms":[{"name":"cell cell contact zone","type":"exact"}],"termid":"GO:0044291"}


id: GO:1905371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide phosphoethanolamine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:25667419","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide phosphoethanolamine metabolic process","synonyms":[{"name":"ceramide phosphoethanolamine metabolism","type":"exact"}],"termid":"GO:1905371"}


id: FYPO:0001454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to freezing conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth during cellular response to freezing","synonyms":[{"name":"normal cell population growth during cellular response to freezing","type":"exact"},{"name":"normal cellular response to freeze-thawing","type":"related"},{"name":"normal cellular response to freezing","type":"related"},{"name":"normal vegetative cell population growth during cellular response to freezing","type":"exact"}],"termid":"FYPO:0001454"}


id: GO:0000346
data:
  {"annotated_genes":["SJAG_00992","SJAG_04202","SJAG_04589","SJAG_04310","SJAG_05328","SJAG_04536","SJAG_04115","SJAG_01717"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86811,102434],"is_not":false,"summary":null,"term":"GO:0000346"},{"annotations":[88373,98030,112221,107299,112477,115044],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The transcription export (TREX) complex couples transcription elongation by RNA polymerase II to mRNA export. The complex associates with the polymerase and travels with it along the length of the transcribed gene. TREX is composed of the THO transcription elongation complex as well as other proteins that couple THO to mRNA export proteins. The TREX complex is known to be found in a wide range of eukaryotes, including S. cerevisiae and metazoans.","definition_xrefs":["GOC:krc","PMID:11979277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_01717":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"transcription export complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TREX complex","type":"exact"}],"termid":"GO:0000346","terms_by_termid":{"GO:0000346":null,"GO:0000445":null}}


id: GO:0055081
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of monoatomic anions within an organism or cell. Monatomic anions (also called simple anions) are anions consisting of exactly one atom.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion homeostasis","termid":"GO:0050801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monoatomic anion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anion homeostasis","type":"broad"}],"termid":"GO:0055081","terms_by_termid":{"GO:0055064":null}}


id: PBO:0040683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 1","termid":"PBO:0040683"}


id: FYPO:0007515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to oxidative stress. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:14633985","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA stability during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA stability in response to oxidative stress","type":"exact"},{"name":"reduced RNA stability during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007515"}


id: PBO:0038427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin pseudogene 1","termid":"PBO:0038427"}


id: GO:0014843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["PMID:16607119","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth factor dependent regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014843"}


id: PR:O94345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl8 gene.","definition_xrefs":["UniProtKB:O94345","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.13","synonyms":[{"name":"Spom972h-mrpl8","type":"exact"}],"termid":"PR:O94345"}


id: PBO:0069309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 565, pseudogene","termid":"PBO:0069309"}


id: PBO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mrd1 (predicted)","termid":"PBO:0003625"}


id: GO:0031175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection development","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite development","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite outgrowth","type":"narrow"}],"termid":"GO:0031175"}


id: PBO:0079895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 4","termid":"PBO:0079895"}


id: PR:P08090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21 kDa protein inducing meiosis and sporulation (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.04","synonyms":[{"name":"Spom972h-mei3","type":"exact"}],"termid":"PR:P08090"}


id: PBO:0060102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 3","termid":"PBO:0060102"}


id: GO:0015200
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95420],"is_not":false,"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables directed movement of methylammonium, CH3NH2, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transmembrane transporter activity","termid":"GO:0005275"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"methylammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015200","terms_by_termid":{"GO:0015200":null}}


id: PBO:0086483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative, non-essential component vacuolar ATPase; conserved in fungi; SWAT-GFP fusion protein localizes to vacuole membrane; partially overlaps the dubious genes YPR169W-A, YPR170W-A and YRP170C","termid":"PBO:0086483"}


id: PR:P50520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 3-kinase catalytic subunit type 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01959","PRO:DNx","PANTHER:PTHR10048:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase vps34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.05","secondary_identifiers":["UniProtKB:P50520"],"synonyms":[{"name":"PI3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIK3C3","type":"exact"},{"name":"vacuolar protein sorting-associated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50520"}


id: MOD:00795
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["PubMed:11743741","Unimod:371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of hydroxymethylvinyl ketone to cysteine","synonyms":[{"name":"HMVK","type":"related"},{"name":"Michael addition of hydroxymethylvinyl ketone to cysteine","type":"related"}],"termid":"MOD:00795"}


id: PBO:0082848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding transcription factor; activates transcription of the metallothionein genes CUP1-1 and CUP1-2 in response to elevated copper concentrations; required for regulation of copper genes in response to DNA-damaging reagents; CUP2 has a paralog, HAA1, that arose from the whole genome duplication","termid":"PBO:0082848"}


id: PBO:0077844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 3","termid":"PBO:0077844"}


id: GO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a 90S preribosome. The 90S preribosome represents the complex that forms on the primary rRNA transcript before it splits into the small subunit and large subunit portions.","definition_xrefs":["GOC:mah","GOC:krc","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"90S preribosome assembly","termid":"GO:0034463"}


id: PBO:0058719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6847","termid":"PBO:0058719"}


id: PBO:0062219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AO member 1 pseudogene","termid":"PBO:0062219"}


id: PBO:0067169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 222, pseudogene","termid":"PBO:0067169"}


id: PBO:0027258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027258"}


id: PATO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence quality inhering in a bearer by virtue of the bearer's having a course that occurs occasionally.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic","termid":"PATO:0002630"}


id: PBO:0040700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 1","termid":"PBO:0040700"}


id: PBO:0054700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2109","termid":"PBO:0054700"}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: PBO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Cti6","termid":"PBO:0003221"}


id: PBO:0069645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 922, pseudogene","termid":"PBO:0069645"}


id: PBO:0078635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 6","termid":"PBO:0078635"}


id: PBO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute inhibitor protein 1","termid":"PBO:0014577"}


id: PBO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm7","termid":"PBO:0004627"}


id: PBO:0004668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Sap62","termid":"PBO:0004668"}


id: PBO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11 (predicted)","termid":"PBO:0002008"}


id: PBO:0074762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary ossification center associated regulator of chondrocyte maturation","termid":"PBO:0074762"}


id: GO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to an external stimulus.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taxis","secondary_identifiers":["Wikipedia:Taxis"],"synonyms":[{"name":"directed movement in response to stimulus","type":"exact"}],"termid":"GO:0042330"}


id: GO:0018312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-serine to form peptidyl-O-(ADP-ribosyl)-L-serine.","definition_xrefs":["RESID:AA0237"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine ADP-ribosylation (obsolete GO:0018312)","termid":"GO:0018312"}


id: PBO:0031811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_biofilm_formation","termid":"PBO:0031811"}


id: PBO:0085780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the endoplasmic reticulum; required for GPI-phospholipase A2 activity that remodels the GPI anchor as a prerequisite for association of GPI-anchored proteins with lipid rafts; functionally complemented by human ortholog PERLD1","termid":"PBO:0085780"}


id: GO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to retinoic acid","synonyms":[{"name":"response to vitamin A acid","type":"exact"}],"termid":"GO:0032526"}


id: PBO:0078317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 2","termid":"PBO:0078317"}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: PBO:0075914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 6","termid":"PBO:0075914"}


id: PBO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-trimethylguanosine cap","termid":"PBO:0034716"}


id: PBO:0060898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 1B","termid":"PBO:0060898"}


id: SO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A major type of spliceosomal intron spliced by the U2 spliceosome, that includes U1, U2, U4/U6 and U5 snRNAs.","definition_xrefs":["PMID:9428511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2_intron","synonyms":[{"name":"U2 intron","type":"exact"}],"termid":"SO:0000184"}


id: GO:0018971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic toluene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tol2"],"synonyms":[{"name":"anaerobic toluene metabolism","type":"exact"}],"termid":"GO:0018971"}


id: PBO:0089468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit B, Pcf2","termid":"PBO:0089468"}


id: PBO:0052554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor F1","termid":"PBO:0052554"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: SO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pi helix has 4.1 residues per turn and a translation of 1.15 (=0.115 nm) along the helical axis. The N-H group of an amino acid forms a hydrogen bond with the C=O group of the amino acid five residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"pi_helix","secondary_identifiers":["BS:00153","http://en.wikipedia.org/wiki/Pi_helix"],"synonyms":[{"name":"pi helix","type":"exact"}],"termid":"SO:0001118"}


id: PBO:0049672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 4","termid":"PBO:0049672"}


id: GO:0019115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NAD(P)+ + H2O = benzoate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.7","EC:1.2.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase [NAD(P)+] activity","secondary_identifiers":["EC:1.2.1.-"],"termid":"GO:0019115"}


id: GO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to laminin alpha-4.","definition_xrefs":["PMID:16824487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-laminin alpha-4 complex","synonyms":[{"name":"ITGAV-ITGB3-LAMA4 complex","type":"narrow"}],"termid":"GO:0071131"}


id: PBO:0086482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative neutral trehalase, required for thermotolerance; may mediate resistance to other cellular stresses; NTH2 has a paralog, NTH1, that arose from the whole genome duplication","termid":"PBO:0086482"}


id: GO:0051310
data:
  {"annotated_genes":["SJAG_03926","SJAG_00302","SJAG_03048","SJAG_03126","SJAG_03543","SJAG_04623","SJAG_00335","SJAG_02761","SJAG_04745","SJAG_01837","SJAG_00646","SJAG_00918","SJAG_03683","SJAG_01278","SJAG_02451","SJAG_04412","SJAG_02346","SJAG_04280","SJAG_04259","SJAG_01082","SJAG_01370","SJAG_03327","SJAG_02731","SJAG_05290","SJAG_04508","SJAG_05319","SJAG_00082","SJAG_05295","SJAG_02336","SJAG_03220","SJAG_00207","SJAG_04076","SJAG_01371","SJAG_00794","SJAG_03540","SJAG_04884","SJAG_02286","SJAG_01297","SJAG_02814","SJAG_02045","SJAG_03437","SJAG_01211","SJAG_04140","SJAG_00678","SJAG_04040","SJAG_01224","SJAG_01775","SJAG_05220","SJAG_01805","SJAG_00768","SJAG_03989","SJAG_07002","SJAG_02624","SJAG_05266","SJAG_05019","SJAG_01601","SJAG_03698","SJAG_00418","SJAG_00930","SJAG_01613","SJAG_03217"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[90015,84104],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[87567,94082,86250,91744,106094,107862,109965,91486,106541,110666,96546,106498,98607,101643,84235,83991,112691,114264,87188,94795,97495,114785],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[86493,97496,94796,109967,113211,89979,111693,104001,84050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[104436],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[90947,106095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[94798,104440,90375,95394,100072],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[109414,106079,104441,85954,90017,94800,94799,108800,109969,112835,114815,108798,103681,110271,85573,85354,98184,96681,98609,99720,90376,95295,98183,105068,98185,108799,110671,100073,113074,87176],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[98534],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[108141,112174,101343,86205],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[112844,107382,86209,89991,98553],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[112847],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[112848],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"},{"annotations":[105331],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[112090,106081,105070,109415,105332,85956,113076,94083,85356,91491,104005,87178,89996,91745,98610,106542,97500,106501,94804,103683,96683,110273,101646],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome congression","type":"narrow"}],"termid":"GO:0051310","terms_by_termid":{"GO:0031134":null,"GO:0031619":null,"GO:0051315":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: PBO:0004599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase Ppm1 (predicted)","termid":"PBO:0004599"}


id: PBO:0090759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, NASP family, Sim3","termid":"PBO:0090759"}


id: GO:1902584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to water deprivation.","definition_xrefs":["GOC:TermGenie","PMID:24198318","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"positively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to water deprivation","synonyms":[{"name":"activation of drought tolerance","type":"related"},{"name":"activation of response to dehydration","type":"narrow"},{"name":"activation of response to drought","type":"narrow"},{"name":"activation of response to thirst","type":"narrow"},{"name":"activation of response to water deprivation","type":"narrow"},{"name":"positive regulation of drought tolerance","type":"related"},{"name":"positive regulation of response to dehydration","type":"exact"},{"name":"positive regulation of response to drought","type":"exact"},{"name":"positive regulation of response to thirst","type":"exact"},{"name":"up regulation of drought tolerance","type":"related"},{"name":"up regulation of response to dehydration","type":"exact"},{"name":"up regulation of response to drought","type":"exact"},{"name":"up regulation of response to thirst","type":"exact"},{"name":"up regulation of response to water deprivation","type":"exact"},{"name":"up-regulation of drought tolerance","type":"related"},{"name":"up-regulation of response to dehydration","type":"exact"},{"name":"up-regulation of response to drought","type":"exact"},{"name":"up-regulation of response to thirst","type":"exact"},{"name":"up-regulation of response to water deprivation","type":"exact"},{"name":"upregulation of drought tolerance","type":"related"},{"name":"upregulation of response to dehydration","type":"exact"},{"name":"upregulation of response to drought","type":"exact"},{"name":"upregulation of response to thirst","type":"exact"},{"name":"upregulation of response to water deprivation","type":"exact"}],"termid":"GO:1902584"}


id: FYPO:0003921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased replication fork arrest at rDNA repeats","synonyms":[{"name":"increased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"increased replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003921"}


id: FYPO:0002671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of one or more proteins released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of protein in growth medium","synonyms":[{"name":"increased concentration of proteins in growth medium","type":"exact"},{"name":"increased level of protein in growth medium","type":"exact"},{"name":"increased release of protein into growth medium","type":"related"}],"termid":"FYPO:0002671"}


id: GO:0032133
data:
  {"annotated_genes":["SJAG_04412","SJAG_02807","SJAG_00697","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105392,108071,112822,114807],"is_not":false,"summary":null,"term":"GO:0032133"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved protein complex that localizes to kinetochores in early mitosis, the spindle mid-zone in anaphase B and to the telophase midbody. It has been proposed that the passenger complex coordinates various events based on its location to different structures during the course of mitosis. Complex members include the BIR-domain-containing protein Survivin, Aurora kinase, INCENP and Borealin.","definition_xrefs":["GOC:vw","PMID:16824200","PMID:19570910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00697":null,"SJAG_01837":null,"SJAG_02807":null,"SJAG_04412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chromosome passenger complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CPC","type":"broad"},{"name":"CPC complex","type":"exact"},{"name":"chromosomal passenger complex","type":"exact"}],"termid":"GO:0032133","terms_by_termid":{"GO:0032133":null}}


id: PBO:0066706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 3","termid":"PBO:0066706"}


id: FYPO:0006494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is significantly lower than the range in wild type cells.","definition_xrefs":["PMID:19205745","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rDNA copy number","termid":"FYPO:0004823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rDNA copy number during vegetative growth","synonyms":[{"name":"decreased copy number of rDNA repeats","type":"exact"},{"name":"decreased copy number of rDNA repeats during mitotic cell cycle","type":"related"},{"name":"decreased rDNA copy number during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal DNA copy number during vegetative growth","type":"exact"},{"name":"shortened rDNA during vegetative growth","type":"related"}],"termid":"FYPO:0006494"}


id: GO:0015280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium channel activity","termid":"GO:0005272"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ligand-gated sodium channel activity","secondary_identifiers":["Reactome:R-HSA-2672334"],"synonyms":[{"name":"ASIC activity","type":"narrow"},{"name":"acid-sensing ion channel activity","type":"narrow"},{"name":"amiloride-sensitive sodium channel activity","type":"narrow"},{"name":"epithelial sodium channel","type":"narrow"}],"termid":"GO:0015280"}


id: GO:0009342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase (NADPH) activity.","definition_xrefs":["GOC:mah","PMID:4565085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex","termid":"GO:0031026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glutamate synthase complex (NADPH)","termid":"GO:0009342"}


id: GO:0007401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete pan-neural process (obsolete GO:0007401)","synonyms":[{"name":"pan-neural process","type":"exact"}],"termid":"GO:0007401"}


id: GO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"respiratory burst","termid":"GO:0045730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory burst","termid":"GO:0060263"}


id: PBO:0109914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYCR1 antisense RNA 1","termid":"PBO:0109914"}


id: MOD:01606
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl 2-aminoadipic 6-phosphoric anhydride.","definition_xrefs":["RESID:AA0503","PubMed:19620981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl 2-aminoadipic 6-phosphoric anhydride","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)-6-oxo-6-(phosphonooxy)hexanoic acid","type":"exact"},{"name":"5-glutamyl 2-aminoadipic 6-phosphoric anhydride","type":"exact"}],"termid":"MOD:01606"}


id: PR:000027610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated at least on the last Thr residue within the TQxSQx(6)TQ motif. Phosphorylated by Rad3 and Tel1. UniProtKB:Q9P7T4-1, Thr-645, MOD:00047.","definition_xrefs":["PMID:14585996","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC694.06c","synonyms":[{"name":"Spom-mrc1/Phos:1","type":"exact"}],"termid":"PR:000027610"}


id: PBO:0062371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 10","termid":"PBO:0062371"}


id: PBO:0061156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 1","termid":"PBO:0061156"}


id: GO:1904244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GO_REF:0000058","PMID:12771515","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of pancreatic trypsinogen secretion","termid":"GO:1904242"},{"relation_name":"positively_regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"activation of pancreatic trypsinogen release","type":"narrow"},{"name":"activation of pancreatic trypsinogen secretion","type":"narrow"},{"name":"positive regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"upregulation of pancreatic trypsinogen release","type":"exact"},{"name":"upregulation of pancreatic trypsinogen secretion","type":"exact"}],"termid":"GO:1904244"}


id: GO:0102453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + H+ + an anthocyanidin-3-O-beta-D-glucoside = coenzyme A + H+ + an anthocyanidin-3-O-[6-O-(hydroxycinnamoyl)-beta-D-glucoside].","definition_xrefs":["RHEA:35411","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"anthocyanidin 3-O-glucoside 6''-O-acyltransferase activity","secondary_identifiers":["EC:2.3.1.215","MetaCyc:RXN-13959"],"termid":"GO:0102453"}


id: PBO:0065443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 2","termid":"PBO:0065443"}


id: GO:2001317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kojic acid.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"kojic acid metabolic process","termid":"GO:2001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kojic acid biosynthetic process","synonyms":[{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"C6H6O4 anabolism","type":"related"},{"name":"C6H6O4 biosynthesis","type":"related"},{"name":"C6H6O4 biosynthetic process","type":"related"},{"name":"C6H6O4 formation","type":"related"},{"name":"C6H6O4 synthesis","type":"related"},{"name":"kojic acid anabolism","type":"exact"},{"name":"kojic acid biosynthesis","type":"exact"},{"name":"kojic acid formation","type":"exact"},{"name":"kojic acid synthesis","type":"exact"}],"termid":"GO:2001317"}


id: PBO:0036009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0036009"}


id: FYPO:0004647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during cellular response to copper ion","synonyms":[{"name":"increased RNA accumulation during cellular response to copper ion","type":"related"},{"name":"increased RNA level during cellular response to copper","type":"exact"},{"name":"increased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"increased transcript level during cellular response to copper ion","type":"exact"}],"termid":"FYPO:0004647"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: PBO:0089967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein","termid":"PBO:0089967"}


id: PBO:0084973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glycerol-3-phosphate dehydrogenase; key enzyme of glycerol synthesis, essential for growth under osmotic stress; expression regulated by high-osmolarity glycerol response pathway; protein abundance increases in response to DNA replication stress; constitutively inactivated via phosphorylation by the protein kinases Ypk1p and Ypk2p, dephosphorylation increases catalytic activity; forms a heterodimer with Pnc1p to facilitate its peroxisomal import","termid":"PBO:0084973"}


id: PBO:0059186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRFAP1 pseudogene 1","termid":"PBO:0059186"}


id: GO:0035655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-18 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-18","termid":"GO:0071351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-18-mediated signaling pathway","synonyms":[{"name":"interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:0035655"}


id: GO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + guanidinoacetate = ADP + 2 H+ + phosphoguanidinoacetate.","definition_xrefs":["EC:2.7.3.1","RHEA:14145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"guanidinoacetate kinase activity","secondary_identifiers":["KEGG_REACTION:R02575","MetaCyc:GUANIDOACETATE-KINASE-RXN"],"synonyms":[{"name":"ATP:guanidinoacetate N-phosphotransferase activity","type":"related"},{"name":"glycocyamine kinase activity","type":"related"},{"name":"guanidoacetate kinase activity","type":"exact"}],"termid":"GO:0047973"}


id: PBO:0002799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk16 (predicted)","termid":"PBO:0002799"}


id: PBO:0050717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 3","termid":"PBO:0050717"}


id: PBO:0087459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; role in localizing Ypt7p to the vacuolar membrane; required for autophagy, the CVT pathway and mitophagy; potential Cdc28 substrate","termid":"PBO:0087459"}


id: PBO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 partner transcriptional co-repressor 1","termid":"PBO:0072690"}


id: PBO:0064151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 3","termid":"PBO:0064151"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: PBO:0078521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 11","termid":"PBO:0078521"}


id: FYECO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 1NM-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 1-NM-PP1","synonyms":[{"name":"+ 1NM-PP1","type":"exact"}],"termid":"FYECO:0000223"}


id: GO:0090601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleation","termid":"GO:0090601"}


id: GO:0010223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to secondary (or auxiliary or axillary) shoots in plants. This process pertains to the initial formation of a structure from unspecified parts. These secondary shoots originate from secondary meristems initiated in the axils of leaf primordia. Axillary meristems function like the shoot apical meristem of the primary shoot initating the development of lateral organs.","definition_xrefs":["PMID:12815068","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"is_a","term_name":"shoot axis formation","termid":"GO:0010346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary shoot formation","synonyms":[{"name":"auxiliary shoot formation","type":"related"},{"name":"axillary shoot formation","type":"related"},{"name":"axillary shoot system formation","type":"exact"},{"name":"shoot branching","type":"related"}],"termid":"GO:0010223"}


id: PBO:0000614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF221 family protein","termid":"PBO:0000614"}


id: GO:0038029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epidermal growth factor receptor signaling pathway in which the signal is transmitted via the MAPKKK cascade.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:21167805"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor signaling pathway via MAPK cascade (obsolete GO:0038029)","synonyms":[{"name":"EGFR signaling pathway via MAPKKK cascade","type":"exact"},{"name":"EGFR signaling via MAPKKK cascade","type":"exact"},{"name":"EGFR/MAPK signaling","type":"exact"},{"name":"epidermal growth factor receptor signaling pathway via MAPKKK cascade","type":"exact"},{"name":"epidermal growth factor receptor signalling pathway via MAPKKK cascade","type":"exact"}],"termid":"GO:0038029"}


id: PBO:0110488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor kinase PRP4K","termid":"PBO:0110488"}


id: PR:Q09831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.05","synonyms":[{"name":"Spom972h-ppk14","type":"exact"}],"termid":"PR:Q09831"}


id: PBO:0075378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 15","termid":"PBO:0075378"}


id: GO:0140010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-aspartate from one side of a membrane to the other.","definition_xrefs":["PMID:7914198","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-aspartate transmembrane transporter activity","termid":"GO:0140010"}


id: PBO:0040657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 1","termid":"PBO:0040657"}


id: PBO:0013828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nam edescription, PantoThenate Kinase","termid":"PBO:0013828"}


id: GO:0043585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nose are generated and organized. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"nose development","termid":"GO:0043584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose morphogenesis","synonyms":[{"name":"nasus morphogenesis","type":"exact"}],"termid":"GO:0043585"}


id: PATO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000212 neural function (obsolete PATO:0000212)","termid":"PATO:0000212"}


id: PBO:0085301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-responsive MAPK scaffold protein; couples activation of the G-protein-coupled pheromone receptor to MAPK activation; intramolecular interaction of PH and VWA domains blocks activation of assembled signaling cascade components (Ste11p, Ste7p and Fus3p) under basal conditions; Gbeta-gamma (Ste4p-Ste18p)-dependent docking at the plasma membrane and binding of PI(4,5)P2 by the PH domain relieves autoinhibition, resulting in pheromone-dependent pathway activation","termid":"PBO:0085301"}


id: PBO:0072847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 2","termid":"PBO:0072847"}


id: PBO:0064060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 94","termid":"PBO:0064060"}


id: GO:2000359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding of sperm to the zona pellucida.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"binding of sperm to zona pellucida","termid":"GO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding of sperm to zona pellucida","synonyms":[{"name":"regulation of ZPG binding","type":"related"}],"termid":"GO:2000359"}


id: GO:1903424
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96985,109926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The process in which fluoride is transported across a membrane.","definition_xrefs":["PMID:24173035","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"fluoride transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fluoride membrane transport","type":"exact"},{"name":"transmembrane fluoride transport","type":"exact"}],"termid":"GO:1903424","terms_by_termid":{"GO:0140116":null}}


id: FYPO:0006500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which disassembly of the cell wall at the site of cell-cell fusion during mating begins earlier than normal, e.g. before pairing with a partner cell. Premature cell wall breakdown often results in cell lysis.","definition_xrefs":["PomBase:mah","PMID:29453312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall disassembly at cell fusion site","termid":"FYPO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0004805","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"premature cell wall disassembly at cell fusion site","synonyms":[{"name":"advanced cell wall disassembly at cell fusion site","type":"exact"},{"name":"premature cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"premature cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"premature cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"premature cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"premature fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"premature fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0006500"}


id: PBO:0027584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ferrozine","termid":"PBO:0027584"}


id: GO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of pituitary adenylate cyclase activating polypeptide, a peptide produced in the hypothalamus that binds to receptors to exert pleiotropic effects including control of neurotransmitter release, vasodilation, bronchodilation, activation of intestinal motility, increase in insulin and histamine secretion, immune modulation, and stimulation of cell proliferation and differentiation.","definition_xrefs":["GOC:mah","PMID:19805477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0098772","GO:0140677","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"pituitary adenylate cyclase activating polypeptide activity","synonyms":[{"name":"pituitary adenylyl cyclase activating polypeptide activity","type":"exact"}],"termid":"GO:0016521"}


id: GO:0044010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of the same species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:cc","GOC:tb","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation","secondary_identifiers":["GO:0052000"],"synonyms":[{"name":"auto-aggregation","type":"broad"},{"name":"bfp-dependent aggregation","type":"narrow"},{"name":"bundle-forming fimbriae-dependent aggregation","type":"narrow"},{"name":"bundle-forming pili-dependent aggregation","type":"narrow"},{"name":"tfp-dependent aggregation","type":"narrow"},{"name":"type IV pili-dependent aggregation","type":"narrow"}],"termid":"GO:0044010"}


id: FYPO:0001758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased protein phosphatase activity","synonyms":[{"name":"increased phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001758"}


id: GO:0033374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to secretory granule","termid":"GO:0033366"},{"relation_name":"part_of","term_name":"T cell secretory granule organization","termid":"GO:0033371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to T cell secretory granule","synonyms":[{"name":"protein localisation in T cell secretory granule","type":"exact"},{"name":"protein localization in T cell secretory granule","type":"exact"},{"name":"protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"protein localization in T-cell secretory granule","type":"exact"},{"name":"protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033374"}


id: PBO:0068414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase","termid":"PBO:0068414"}


id: PBO:0029057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole","termid":"PBO:0029057"}


id: PBO:0086230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Arp2/3 complex; interacts with Arp2/3 complex to stimulate actin filament debranching and inhibit actin nucleation; has similarity to Cof1p and also to human glia maturation factor (GMF); null mutant displays elevated mitochondrial genome loss","termid":"PBO:0086230"}


id: MOD:01923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and an L-lysine residue by an isopeptide bond to form N6-(L-aspartyl)-L-lysine and the release of water.","definition_xrefs":["RESID:AA0583","PubMed:15044436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-aspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S)-2-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"N(epsilon)-(alpha-aspartyl)lysine","type":"exact"},{"name":"N6-(L-aspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asp)","type":"exact"},{"name":"alpha-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"aspartyl N6-lysine","type":"exact"}],"termid":"MOD:01923"}


id: PBO:0071614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 32","termid":"PBO:0071614"}


id: GO:0045890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045890)","synonyms":[{"name":"regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045890"}


id: GO:1905890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to very-low-density lipoprotein particle stimulus.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:aruk","GOC:TermGenie","PMID:7592957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to very-low-density lipoprotein particle stimulus","termid":"GO:0090731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"regulation of cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:1905890"}


id: PBO:0049003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1 like","termid":"PBO:0049003"}


id: GO:1903612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-dependent ATPase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:10861851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent ATPase activity","termid":"GO:1903610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-dependent ATPase activity","synonyms":[{"name":"activation of calcium-dependent ATPase activity","type":"narrow"},{"name":"up regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"up-regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"upregulation of calcium-dependent ATPase activity","type":"exact"}],"termid":"GO:1903612"}


id: PBO:0087516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; in concert with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication s","termid":"PBO:0087516"}


id: PBO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_S-phase_DNA_damage_checkpoint","termid":"PBO:0031419"}


id: GO:0042426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline catabolic process","synonyms":[{"name":"choline breakdown","type":"exact"},{"name":"choline catabolism","type":"exact"},{"name":"choline degradation","type":"exact"}],"termid":"GO:0042426"}


id: PBO:0028598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrostatic_pressure","termid":"PBO:0028598"}


id: PR:O59710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH:adrenodoxin oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03689","PANTHER:PTHR11938:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH:adrenodoxin oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.01c","secondary_identifiers":["UniProtKB:O59710"],"synonyms":[{"name":"AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDXR","type":"exact"},{"name":"adrenodoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin--NADP(+) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59710"}


id: PBO:0041165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 2","termid":"PBO:0041165"}


id: GO:0035585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses calcium ions imported from an extracellular source to convert a signal into a response.","definition_xrefs":["GOC:bf","GOC:BHF","PMID:20192754"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-mediated signaling using extracellular calcium source (obsolete GO:0035585)","synonyms":[{"name":"calcium signaling using extracellular calcium source","type":"exact"},{"name":"calcium signalling using extracellular calcium source","type":"exact"},{"name":"calcium-mediated signalling using extracellular calcium source","type":"exact"},{"name":"extracellular calcium influx","type":"narrow"}],"termid":"GO:0035585"}


id: GO:0046708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IDP, inosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"IDP metabolic process","termid":"GO:0046707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"IDP biosynthetic process","synonyms":[{"name":"IDP anabolism","type":"exact"},{"name":"IDP biosynthesis","type":"exact"},{"name":"IDP formation","type":"exact"},{"name":"IDP synthesis","type":"exact"}],"termid":"GO:0046708"}


id: PBO:0050973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 18","termid":"PBO:0050973"}


id: GO:1902631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23223304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"negatively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane hyperpolarization","synonyms":[{"name":"down regulation of membrane hyperpolarization","type":"exact"},{"name":"down-regulation of membrane hyperpolarization","type":"exact"},{"name":"downregulation of membrane hyperpolarization","type":"exact"},{"name":"inhibition of membrane hyperpolarization","type":"narrow"}],"termid":"GO:1902631"}


id: PBO:0065113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C eta","termid":"PBO:0065113"}


id: PR:O43082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC947.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 14-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.07","synonyms":[{"name":"Spom972h-SPBC947.07","type":"exact"},{"name":"ribosome biogenesis protein rrp14-C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43082"}


id: GO:1903448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geraniol.","definition_xrefs":["GOC:TermGenie","GOC:di","GO_REF:0000068","PMID:23200656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"geraniol metabolic process","termid":"GO:1903446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"geraniol biosynthetic process","synonyms":[{"name":"geraniol anabolism","type":"exact"},{"name":"geraniol biosynthesis","type":"exact"},{"name":"geraniol formation","type":"exact"},{"name":"geraniol synthesis","type":"exact"}],"termid":"GO:1903448"}


id: PBO:0053458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 411","termid":"PBO:0053458"}


id: GO:0070208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein heterotrimer, a macromolecular structure consisting of three noncovalently associated subunits, of which not all are identical.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein heterooligomerization","termid":"GO:0051291"},{"relation_name":"is_a","term_name":"protein trimerization","termid":"GO:0070206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein heterotrimerization","synonyms":[{"name":"protein heterotrimer assembly","type":"exact"},{"name":"protein heterotrimer biosynthesis","type":"exact"},{"name":"protein heterotrimer biosynthetic process","type":"exact"},{"name":"protein heterotrimer formation","type":"exact"}],"termid":"GO:0070208"}


id: PR:O59804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 10 kDa chaperonin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"10 kDa heat shock protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.06c","secondary_identifiers":["UniProtKB:O59804"],"synonyms":[{"name":"10 kDa chaperonin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HSP10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-groS","type":"exact"}],"termid":"PR:O59804"}


id: GO:0102840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-16:3-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-18:2-2-16:3-monogalactosyldiacylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.35","MetaCyc:RXN-8301"],"termid":"GO:0102840"}


id: PBO:0058849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8078","termid":"PBO:0058849"}


id: PBO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cruciform cutting endonuclease Cce1","termid":"PBO:0002455"}


id: PBO:0031032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_organization_during_vegetative_growth","termid":"PBO:0031032"}


id: PBO:0086751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to have a role in cell budding based on computational 'guilt by association' analysis","termid":"PBO:0086751"}


id: PBO:0064758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase C","termid":"PBO:0064758"}


id: GO:0044294
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing nerve cell dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone","termid":"GO:0030426"},{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic growth cone","secondary_identifiers":["NIF_Subcellular:sao1594955670"],"synonyms":[{"name":"dendrite growth cone","type":"exact"}],"termid":"GO:0044294"}


id: SO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinuous stretch of DNA that is the combination of one or several TFRSs whose bound TFs work jointly in the regulation of a promoter. ","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_module","synonyms":[{"name":"TFRS module","type":"exact"},{"name":"TFRS phrase","type":"exact"},{"name":"transcription factor regulatory site module","type":"exact"},{"name":"transcription factor regulatory site phrase","type":"exact"}],"termid":"SO:0002296"}


id: GO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:isa_complete","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis (obsolete GO:0007072)","synonyms":[{"name":"activation of transcription on exit from mitosis","type":"narrow"}],"termid":"GO:0007072"}


id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: PBO:0049264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin C","termid":"PBO:0049264"}


id: GO:0022620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microgametophyte. The microgametophyte vegetative cell gives rise to the pollen tube.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microgametophyte vegetative cell differentiation","synonyms":[{"name":"tube cell differentiation","type":"related"},{"name":"vegetative cell differentiation","type":"related"}],"termid":"GO:0022620"}


id: SO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase II.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_II_TATA_box","synonyms":[{"name":"RNA polymerase II TATA box","type":"exact"}],"termid":"SO:0001661"}


id: GO:0019433
data:
  {"annotated_genes":["SJAG_01036","SJAG_02543","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88076,90220,113718],"is_not":false,"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol catabolic process","termid":"GO:0046464"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"triglyceride catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LIPAS-PWY"],"synonyms":[{"name":"triacylglycerol catabolic process","type":"exact"},{"name":"triacylglycerol catabolism","type":"exact"},{"name":"triglyceride breakdown","type":"exact"},{"name":"triglyceride catabolism","type":"exact"},{"name":"triglyceride degradation","type":"exact"}],"termid":"GO:0019433","terms_by_termid":{"GO:0019433":null}}


id: PBO:0063246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 11","termid":"PBO:0063246"}


id: PBO:0074373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 nonsense mediated mRNA decay associated PI3K related kinase","termid":"PBO:0074373"}


id: PATO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bing aligned or positioned towards another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriented towards","termid":"PATO:0002448"}


id: PBO:0011473
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of maltose to glucose is 14.5 (mM min-1 ml-2)","termid":"PBO:0011473"}


id: PBO:0072656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8C","termid":"PBO:0072656"}


id: PBO:0064121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 1, transient receptor potential cation channel","termid":"PBO:0064121"}


id: PBO:0056439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 12","termid":"PBO:0056439"}


id: PBO:0048375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1A","termid":"PBO:0048375"}


id: GO:1902029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["PMID:22110608","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K18 acetylation (obsolete GO:1902029)","synonyms":[{"name":"activation of histone H3 acetylation at K18","type":"exact"},{"name":"activation of histone H3-K18 acetylation","type":"narrow"},{"name":"activation of histone H3K18 acetylation","type":"exact"},{"name":"positive regulation of histone H3 acetylation at K18","type":"exact"},{"name":"positive regulation of histone H3K18 acetylation","type":"exact"},{"name":"up regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up regulation of histone H3K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3K18 acetylation","type":"exact"},{"name":"upregulation of histone H3 acetylation at K18","type":"exact"},{"name":"upregulation of histone H3-K18 acetylation","type":"exact"},{"name":"upregulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902029"}


id: GO:1901557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fenofibrate stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fenofibrate","termid":"GO:1901557"}


id: PBO:0076644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 1","termid":"PBO:0076644"}


id: PBO:0080759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG pseudogene, Y-linked 2","termid":"PBO:0080759"}


id: PBO:0044922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGCR8 microprocessor complex subunit","termid":"PBO:0044922"}


id: PBO:0004190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Rrn7","termid":"PBO:0004190"}


id: PBO:0031297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_vegetative_cell","termid":"PBO:0031297"}


id: GO:0060701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of ribonuclease activity, catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nuclease activity","termid":"GO:0032074"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of ribonuclease activity","termid":"GO:0060700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribonuclease activity","termid":"GO:0060701"}


id: PBO:0087055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication","termid":"PBO:0087055"}


id: GO:1902977
data:
  {"annotated_genes":["SJAG_02607","SJAG_04995","SJAG_00327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86646,95589,106746],"is_not":false,"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"Any DNA replication preinitiation complex assembly that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_02607":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0065003","GO:0008150","GO:0044085","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"mitotic DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication preinitiation complex formation involved in mitotic cell cycle","type":"exact"},{"name":"pre-IC complex assembly involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1902977","terms_by_termid":{"GO:1902977":null}}


id: PBO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oxidative_stress","termid":"PBO:0031495"}


id: PBO:0075563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine kinase 2","termid":"PBO:0075563"}


id: GO:0030670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a phagocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phagocytic vesicle membrane","synonyms":[{"name":"phagosome membrane","type":"exact"}],"termid":"GO:0030670"}


id: GO:0009779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic phosphorylation process in which ATP synthesis is linked to the transport of electrons from water to NADP+ with the production of NADPH and dioxygen (O2). Involves photosystem I and photosystem II.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic phosphorylation","termid":"GO:0009777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"noncyclic photosynthetic phosphorylation","termid":"GO:0009779"}


id: PBO:0079848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-50 inner nuclear membrane RNA binding protein","termid":"PBO:0079848"}


id: PR:Q9UUA8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saw1 gene.","definition_xrefs":["UniProtKB:Q9UUA8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C409.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.16c","synonyms":[{"name":"Spom972h-saw1","type":"exact"}],"termid":"PR:Q9UUA8"}


id: PBO:0075070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 119","termid":"PBO:0075070"}


id: GO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate or frequency of pancreatic B cell proliferation. Pancreatic B cell are cells of the pancreas that secrete insulin.","definition_xrefs":["GOC:yaf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of type B pancreatic cell proliferation (obsolete GO:0044343)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"related"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of pancreatic B cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of pancreatic B cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:0044343"}


id: PBO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_highly_transcribed_RNA_polymerase_II_genes_during_vegetative_growth","termid":"PBO:0036184"}


id: FYPO:0005384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the first meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"meiosis I metaphase/anaphase transition delay","synonyms":[{"name":"delayed cell cycle passage through meiosis I metaphase/anaphase transition","type":"exact"},{"name":"delayed metaphase/anaphase transition of meiosis I","type":"exact"},{"name":"delayed onset of meiotic anaphase I","type":"exact"},{"name":"increased duration of meiosis I metaphase","type":"related"},{"name":"increased duration of metaphase during meiosis I","type":"related"},{"name":"meiotic cell cycle delay at first metaphase/anaphase transition","type":"exact"},{"name":"metaphase/anaphase transition delay during first meiotic nuclear division","type":"exact"},{"name":"metaphase/anaphase transition delay during meiosis I","type":"exact"}],"termid":"FYPO:0005384"}


id: PBO:0029080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029080"}


id: PBO:0051806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQSEC3 antisense RNA 2","termid":"PBO:0051806"}


id: PBO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.183","termid":"PBO:0002492"}


id: PBO:0088973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucan synthase catalytic subunit Bgs3","termid":"PBO:0088973"}


id: GO:0032328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alanine, 2-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"alanine transport","termid":"GO:0032328"}


id: GO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of stress-granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress granule assembly","termid":"GO:0062028"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress granule assembly","termid":"GO:0062029"}


id: PATO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000793 immubocompetent value (obsolete PATO:0000793)","termid":"PATO:0000793"}


id: PBO:0027083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027083"}


id: PBO:0090575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5","termid":"PBO:0090575"}


id: PATO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000391 intense (obsolete PATO:0000391)","termid":"PATO:0000391"}


id: PBO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2453","termid":"PBO:0055038"}


id: PATO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000798 defecation value (obsolete PATO:0000798)","termid":"PATO:0000798"}


id: PATO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity which is held by a bearer when the latter exhibits complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maturity","termid":"PATO:0000261"}


id: PBO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 3","termid":"PBO:0047495"}


id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: GO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum development","termid":"GO:0048726"}


id: GO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA + H2O + acceptor = (24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestan-26-oyl-CoA + reduced acceptor.","definition_xrefs":["EC:1.17.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity","secondary_identifiers":["RHEA:15733","MetaCyc:1.17.99.3-RXN"],"synonyms":[{"name":"(25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA:acceptor 24-oxidoreductase (24R-hydroxylating) activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate 24-hydroxylase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA oxidase activity","type":"related"},{"name":"THC-CoA oxidase activity","type":"related"},{"name":"THCA-CoA oxidase activity","type":"related"},{"name":"trihydroxycoprostanoyl-CoA oxidase activity","type":"related"}],"termid":"GO:0033791"}


