# terms

id: GO:0060542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of strand invasion","termid":"GO:0060542"}


id: PBO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 59, pseudogene","termid":"PBO:0044398"}


id: PBO:0061177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 7-1","termid":"PBO:0061177"}


id: PBO:0074893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 68","termid":"PBO:0074893"}


id: PBO:0081470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 343","termid":"PBO:0081470"}


id: PBO:0089489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin, BFC/FNIP-Folliculin complex subunit Bhd1","termid":"PBO:0089489"}


id: GO:0007091
data:
  {"annotated_genes":["SJAG_02169","SJAG_04259","SJAG_04999","SJAG_04126","SJAG_01330","SJAG_03575","SJAG_01837","SJAG_03126","SJAG_04699","SJAG_05329","SJAG_04573","SJAG_02380","SJAG_00666","SJAG_01805","SJAG_00883","SJAG_02498","SJAG_03048","SJAG_04968","SJAG_03353","SJAG_01082","SJAG_02336","SJAG_02451","SJAG_04884","SJAG_01956","SJAG_03681","SJAG_01679","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86552,98003,109311],"is_not":false,"summary":null,"term":"GO:0007091"},{"annotations":[103408,112064,86924,109966,104435,95750,100069,108140,110441],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[86926,109970,97965,106096,95599,102486,112837,111712,110672],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[102487,111713],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[90377],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112841],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[110442,98278,107553,96299,89990,110935,98552,93875],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[90378],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:10465783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03575":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"metaphase/anaphase transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metaphase/anaphase transition by anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"mitotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0007091","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0045841":null,"GO:0045842":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: PBO:0075931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST14 transmembrane serine protease matriptase","termid":"PBO:0075931"}


id: PBO:0051837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase M","termid":"PBO:0051837"}


id: PBO:0054426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1822","termid":"PBO:0054426"}


id: PBO:0044826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 113","termid":"PBO:0044826"}


id: PBO:0073536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2A","termid":"PBO:0073536"}


id: SO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron","synonyms":[{"name":"inside intron","type":"exact"}],"termid":"SO:0000069"}


id: PBO:0000314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps55 (predicted)","termid":"PBO:0000314"}


id: PBO:0030263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_erythromycin","termid":"PBO:0030263"}


id: PBO:0062530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily V member 1 pseudogene","termid":"PBO:0062530"}


id: PBO:0083406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032W-A","termid":"PBO:0083406"}


id: GO:0018718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxyphenanthrene + UDP-glucose = 2-hydroxy-1-phenanthryl-beta-D-glucopyranoside + UDP.","definition_xrefs":["UM-BBD_reactionID:r0569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"1,2-dihydroxy-phenanthrene glycosyltransferase activity","termid":"GO:0018718"}


id: PBO:0043605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen beta(1-O)galactosyltransferase 2","termid":"PBO:0043605"}


id: PBO:0065970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog D","termid":"PBO:0065970"}


id: PBO:0040200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 13","termid":"PBO:0040200"}


id: GO:0031375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity.","definition_xrefs":["GOC:mah","ISBN:0716720094","ISBN:0471331309","PMID:12957385"],"gene_count":0,"genotype_count":0,"name":"obsolete type II fatty acid synthase complex (obsolete GO:0031375)","synonyms":[{"name":"type II FAS","type":"exact"},{"name":"type II FAS complex","type":"exact"},{"name":"type II fatty acid synthase","type":"exact"},{"name":"type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031375"}


id: GO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidyl-proline 3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630769"],"termid":"GO:0031544"}


id: PBO:0036285
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localisation to cell tip microtubule-dependent","termid":"PBO:0036285"}


id: GO:1901817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-zeacarotene.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:3710717","UniPathway:UPA00805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"beta-zeacarotene catabolic process","synonyms":[{"name":"beta-zeacarotene breakdown","type":"exact"},{"name":"beta-zeacarotene catabolism","type":"exact"},{"name":"beta-zeacarotene degradation","type":"exact"}],"termid":"GO:1901817"}


id: GO:1900535
data:
  {"annotated_genes":["SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93864],"is_not":false,"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"palmitic acid metabolic process","termid":"GO:1900533"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"palmitic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900535","terms_by_termid":{"GO:1900535":null}}


id: GO:0052492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont signal transduction pathway (obsolete GO:0052492)","synonyms":[{"name":"down regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"down-regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"downregulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"inhibition by host of symbiont signal transduction pathway","type":"narrow"},{"name":"negative modulation by organism of symbiont signal transduction pathway","type":"exact"}],"termid":"GO:0052492"}


id: PBO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7-like Rlp7 involved in ribosome biogenesis (predicted)","termid":"PBO:0001136"}


id: PBO:0068621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 1","termid":"PBO:0068621"}


id: GO:1902458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of stomatal opening","termid":"GO:1902456"},{"relation_name":"positively_regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stomatal opening","synonyms":[{"name":"activation of stomatal opening","type":"narrow"},{"name":"up regulation of stomatal opening","type":"exact"},{"name":"up-regulation of stomatal opening","type":"exact"},{"name":"upregulation of stomatal opening","type":"exact"}],"termid":"GO:1902458"}


id: GO:0098515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a low humidity stimulus is detected and converted into a molecular signal as a part of the sensory detection of low humidity.","definition_xrefs":["PMID:18269908","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity stimulus involved in sensory perception","termid":"GO:0098512"},{"relation_name":"is_a","term_name":"detection of low humidity","termid":"GO:0098517"},{"relation_name":"part_of","term_name":"sensory perception of low humidity","termid":"GO:0098511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity stimulus involved in sensory perception","termid":"GO:0098515"}


id: FYPO:0002744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid transport RNAs are transcribed from genes whose products are involved in amino acid transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of amino acid transport gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002744"}


id: PBO:0002981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Klf1","termid":"PBO:0002981"}


id: PBO:0087958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein; subunit of the glycosylphosphatidylinositol transamidase complex that adds GPIs to newly synthesized proteins; human PIG-S homolog","termid":"PBO:0087958"}


id: PBO:0065400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 3 pseudogene 1","termid":"PBO:0065400"}


id: PBO:0083445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ALA1/YOR335C","termid":"PBO:0083445"}


id: PBO:0060825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN1 divergent transcript","termid":"PBO:0060825"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: PBO:0044852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 133 (pseudogene)","termid":"PBO:0044852"}


id: MOD:00962
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that by reducing the indole ring system of tryptophan to indoline effectively converts an L-tryptophan residue to 2',3'-dihydrotryptophan.","definition_xrefs":["URL:http://dx.doi.org/10.1016/S0040-4039(00)99113-5","DeltaMass:343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"hydrogenated residue","termid":"MOD:01473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-dihydrotryptophan","termid":"MOD:00962"}


id: GO:0071866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:yaf","GOC:mtg_apoptosis","PMID:17063141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of apoptotic process in bone marrow cell","termid":"GO:0071865"},{"relation_name":"negatively_regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"down regulation of apoptosis in bone marrow","type":"exact"},{"name":"down-regulation of apoptosis in bone marrow","type":"exact"},{"name":"downregulation of apoptosis in bone marrow","type":"exact"},{"name":"inhibition of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptotic process in bone marrow","type":"exact"},{"name":"negative regulation of bone marrow cell apoptosis","type":"exact"},{"name":"negative regulation of bone marrow cell programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of killing of bone marrow cells","type":"exact"},{"name":"negative regulation of programmed cell death of bone marrow cells by apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death, bone marrow cells","type":"exact"}],"termid":"GO:0071866"}


id: GO:1990475
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that repopulate vacancies within the readily releasable pool (RRP) of synaptic vesicles, and require more significant stimuli than the RRP in order to release neurotransmitter; about 10-15% of the total number of synaptic vesicles at a resting terminal bouton are in this state.","definition_xrefs":["PMID:22745285","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"synaptic vesicle, recycling pool","synonyms":[{"name":"recycling pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990475"}


id: PBO:0077375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 116","termid":"PBO:0077375"}


id: PR:Q9UTS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psp3 gene.","definition_xrefs":["UniProtKB:Q9UTS0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtilase-type proteinase psp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.01","synonyms":[{"name":"Spom972h-psp3","type":"exact"}],"termid":"PR:Q9UTS0"}


id: GO:1903077
data:
  {"annotated_genes":["SJAG_04597","SJAG_02392","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92034],"is_not":false,"summary":null,"term":"GO:1903077"},{"annotations":[84321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[90587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:11602640","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090005","GO:1905964"],"synonyms":[{"name":"down regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down regulation of protein localization in plasma membrane","type":"exact"},{"name":"down regulation of protein localization to plasma membrane","type":"exact"},{"name":"down regulation of protein targeting to plasma membrane","type":"related"},{"name":"down regulation of protein-plasma membrane targeting","type":"related"},{"name":"down-regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization to plasma membrane","type":"exact"},{"name":"down-regulation of protein targeting to plasma membrane","type":"related"},{"name":"down-regulation of protein-plasma membrane targeting","type":"related"},{"name":"downregulation of protein localisation in plasma membrane","type":"exact"},{"name":"downregulation of protein localization in plasma membrane","type":"exact"},{"name":"downregulation of protein localization to plasma membrane","type":"exact"},{"name":"downregulation of protein targeting to plasma membrane","type":"related"},{"name":"downregulation of protein-plasma membrane targeting","type":"related"},{"name":"inhibition of protein localisation in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization to plasma membrane","type":"narrow"},{"name":"inhibition of protein targeting to plasma membrane","type":"narrow"},{"name":"inhibition of protein-plasma membrane targeting","type":"narrow"},{"name":"negative regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"negative regulation of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of protein localization in plasma membrane","type":"exact"},{"name":"negative regulation of protein targeting to plasma membrane","type":"related"},{"name":"negative regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903077","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: PBO:0060614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1","termid":"PBO:0060614"}


id: PBO:0076093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stum, mechanosensory transduction mediator homolog","termid":"PBO:0076093"}


id: PATO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000036 water content (obsolete PATO:0000036)","termid":"PATO:0000036"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: GO:1903015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exo-alpha-sialidase activity.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:23544079","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of exo-alpha-sialidase activity","synonyms":[{"name":"regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"regulation of acetylneuraminidase activity","type":"exact"},{"name":"regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"regulation of alpha-neuraminidase activity","type":"exact"},{"name":"regulation of neuraminidase activity","type":"exact"},{"name":"regulation of sialidase activity","type":"exact"}],"termid":"GO:1903015"}


id: PBO:0075437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N2","termid":"PBO:0075437"}


id: PBO:0044333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 16","termid":"PBO:0044333"}


id: FYPO:0006053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spore cytoplasm contains fewer lipid droplets than normal. Some lipid droplets are present in the ascus epiplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","synonyms":[{"name":"decreased lipid droplet level in spore cytoplasm, with droplets mislocalized to ascus epiplasm","type":"exact"},{"name":"lipid droplets present in spore cytoplasm in reduced numbers, mislocalized to ascus epiplasm","type":"exact"},{"name":"reduced inclusion of lipid droplets in spore cytoplasm, mislocalized to ascus cytoplasm","type":"exact"}],"termid":"FYPO:0006053"}


id: GO:0048007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["GOC:add","PMID:15928680","PMID:15928678","PMID:10375559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous antigen","termid":"GO:0019884"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, exogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, exogenous peptide antigen","type":"exact"},{"name":"exogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048007"}


id: PBO:0034338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_1_orthology_relationship_with","termid":"PBO:0034338"}


id: PBO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 30, NatC catalytic subunit","termid":"PBO:0060409"}


id: PR:O60055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small subunit processome component 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03996","PANTHER:PTHR17695:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.04","secondary_identifiers":["UniProtKB:O60055"],"synonyms":[{"name":"Spom972h-UTP20","type":"exact"},{"name":"U3 snoRNA-associated protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60055"}


id: GO:0005461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucuronic acid from one side of a membrane to the other. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"UDP-glucuronic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-174368","Reactome:R-HSA-5603297"],"termid":"GO:0005461"}


id: PBO:0003299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor Mfm3","termid":"PBO:0003299"}


id: PBO:0002987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase(predicted)","termid":"PBO:0002987"}


id: PBO:0091517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 3","termid":"PBO:0091517"}


id: PBO:0004760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase (predicted)","termid":"PBO:0004760"}


id: GO:0006912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete phagosome formation (obsolete GO:0006912)","synonyms":[{"name":"phagosome formation","type":"exact"}],"termid":"GO:0006912"}


id: GO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the dorsal motor nucleus of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve structural organization","synonyms":[{"name":"dorsal motor nucleus of vagus nerve structural organisation","type":"exact"}],"termid":"GO:0035763"}


id: FYPO:0006570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair is normal (i.e. indistinguishable from wild type). UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal UV-damage excision repair","synonyms":[{"name":"normal UV-damage excision repair during mitotic cell cycle","type":"related"},{"name":"normal UV-damage excision repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006570"}


id: GO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell receptor signaling pathway","synonyms":[{"name":"activation of T cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of T cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of TCR signaling pathway","type":"exact"},{"name":"stimulation of T cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of T cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"upregulation of T cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050862"}


id: FYPO:0006218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to potassium ion starvation","synonyms":[{"name":"decreased growth during cellular response to potassium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to potassium ion starvation","type":"exact"},{"name":"hypersensitive to potassium ion starvation","type":"exact"},{"name":"reduced growth in low potassium","type":"related"},{"name":"sensitive to potassium ion depletion","type":"exact"},{"name":"sensitive to potassium ion deprivation","type":"exact"},{"name":"sensitive to potassium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to potassium starvation","type":"exact"}],"termid":"FYPO:0006218"}


id: GO:0002118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral interaction between organisms in which one organism has the intention of inflicting physical damage on another individual.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggressive behavior","secondary_identifiers":["Wikipedia:Aggression"],"synonyms":[{"name":"aggression","type":"exact"}],"termid":"GO:0002118"}


id: PBO:0064035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 69","termid":"PBO:0064035"}


id: PBO:0090031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8","termid":"PBO:0090031"}


id: GO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0004857","GO:0030234","GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity","secondary_identifiers":["GO:0004870"],"synonyms":[{"name":"cystatin","type":"narrow"},{"name":"cysteine protease inhibitor activity","type":"narrow"},{"name":"thiol protease inhibitor","type":"narrow"}],"termid":"GO:0004869"}


id: GO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-3S iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide. The three-iron three-sulfur cluster probably does not exist except as an intermediate form.","definition_xrefs":["RESID:AA0138"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide (obsolete GO:0018286)","synonyms":[{"name":"iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide","type":"exact"},{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron trisulphide","type":"exact"}],"termid":"GO:0018286"}


id: PBO:0080701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 5B","termid":"PBO:0080701"}


id: GO:0010298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrocamalexic acid = camalexin + CO2 + H+.","definition_xrefs":["MetaCyc:RXN-8275","PMID:16766671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydrocamalexic acid decarboxylase activity","secondary_identifiers":["RHEA:34807"],"termid":"GO:0010298"}


id: GO:0106082
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91951],"is_not":false,"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"},{"relation_name":"is_a","term_name":"sucrose transmembrane transport","termid":"GO:1904982"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"sucrose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106082","terms_by_termid":{"GO:0106082":null}}


id: PBO:0056525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 2 receptor","termid":"PBO:0056525"}


id: GO:1900981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"negatively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phenazine biosynthetic process","synonyms":[{"name":"down regulation of acridizine biosynthesis","type":"related"},{"name":"down regulation of acridizine biosynthetic process","type":"related"},{"name":"down regulation of azophenylene biosynthesis","type":"related"},{"name":"down regulation of azophenylene biosynthetic process","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down regulation of phenazine biosynthetic process","type":"exact"},{"name":"down-regulation of acridizine biosynthesis","type":"related"},{"name":"down-regulation of acridizine biosynthetic process","type":"related"},{"name":"down-regulation of azophenylene biosynthesis","type":"related"},{"name":"down-regulation of azophenylene biosynthetic process","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down-regulation of phenazine biosynthetic process","type":"exact"},{"name":"downregulation of acridizine biosynthesis","type":"related"},{"name":"downregulation of acridizine biosynthetic process","type":"related"},{"name":"downregulation of azophenylene biosynthesis","type":"related"},{"name":"downregulation of azophenylene biosynthetic process","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"downregulation of phenazine biosynthetic process","type":"exact"},{"name":"inhibition of acridizine biosynthesis","type":"related"},{"name":"inhibition of acridizine biosynthetic process","type":"related"},{"name":"inhibition of azophenylene biosynthesis","type":"related"},{"name":"inhibition of azophenylene biosynthetic process","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthesis","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthetic process","type":"related"},{"name":"inhibition of phenazine biosynthetic process","type":"narrow"},{"name":"negative regulation of acridizine biosynthesis","type":"related"},{"name":"negative regulation of acridizine biosynthetic process","type":"related"},{"name":"negative regulation of azophenylene biosynthesis","type":"related"},{"name":"negative regulation of azophenylene biosynthetic process","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900981"}


id: GO:2000605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"},{"relation_name":"is_a","term_name":"regulation of secondary growth","termid":"GO:2000603"},{"relation_name":"positively_regulates","term_name":"secondary growth","termid":"GO:0080117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary growth","termid":"GO:2000605"}


id: FYPO:0000181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which reciprocal DNA recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished crossover","synonyms":[{"name":"DNA recombination defects, crossover, abolished","type":"exact"},{"name":"abolished crossover during mitotic cell cycle","type":"related"},{"name":"crossover abolished","type":"exact"},{"name":"crossover abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000181"}


id: PBO:0053886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1166","termid":"PBO:0053886"}


id: PBO:0085795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; component of the Swr1p complex that incorporates Htz1p into chromatin","termid":"PBO:0085795"}


id: GO:0140314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calcium ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:13130076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"calcium ion sequestering activity","termid":"GO:0140314"}


id: GO:0052839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + inositol diphosphate tetrakisphosphate = ADP + inositol bisdiphosphate trisphosphate.","definition_xrefs":["PMID:10827188","PMID:11502751","PMID:18355727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-1855230","Reactome:R-HSA-1855193"],"termid":"GO:0052839"}


id: PBO:0082523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-cycle checkpoint S/T protein kinase; required for transient G2/M arrest after DNA damage, damage-induced transcription, and nuclear-to-cytoplasmic redistribution of Rnr2p-Rnr4p after genotoxic stress and iron deprivation; phosphorylates repair protein Rad55p, transcriptional repressor Sml1p, superoxide dismutase, and ribonucleotide reductase inhibitors Crt1p and Dif1p; functions in the Mec1p pathway to regulate dNTP pools and telomere length; postreplicative repair role","termid":"PBO:0082523"}


id: PBO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 43","termid":"PBO:0060096"}


id: PR:U3H0A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1884.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:U3H0A9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPCC1884.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1884.01","synonyms":[{"name":"Spom972h-SPCC1884.01","type":"exact"}],"termid":"PR:U3H0A9"}


id: GO:1905249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of memory.","definition_xrefs":["GOC:TermGenie","PMID:25905804","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of memory (obsolete GO:1905249)","synonyms":[{"name":"inhibition of memory","type":"narrow"},{"name":"suppression of memory","type":"exact"}],"termid":"GO:1905249"}


id: FYPO:0007420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal transcription at telomere","synonyms":[{"name":"abnormal telomeric transcription","type":"exact"},{"name":"abnormal transcription from telomere","type":"exact"}],"termid":"FYPO:0007420"}


id: PBO:0060968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit alpha","termid":"PBO:0060968"}


id: MOD:00195
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-alanine residue and a glycine residue to form L-alanine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0187","PubMed:10220322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1-aminoethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-aminoethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Ala-Gly)","type":"exact"},{"name":"L-alanine 5-imidazolinone glycine","type":"exact"},{"name":"XLNK-1Ala-NGly(Imidazole)","type":"exact"},{"name":"alanyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00195"}


id: PBO:0073473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan delta","termid":"PBO:0073473"}


id: PBO:0070055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 12, pseudogene","termid":"PBO:0070055"}


id: GO:0072470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of cell size control checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cell size control checkpoint signaling","synonyms":[{"name":"cell size control checkpoint effector process","type":"exact"},{"name":"response to mitotic cell cycle cell size control checkpoint signaling","type":"exact"},{"name":"response to signal involved in cell size control checkpoint","type":"exact"}],"termid":"GO:0072470"}


id: PBO:0075579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 2","termid":"PBO:0075579"}


id: FYPO:0001605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of substance in cytosol","synonyms":[{"name":"decreased cytosolic level of substance","type":"exact"},{"name":"decreased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in cytosol during vegetative growth","type":"exact"},{"name":"reduced level of substance in cytosol","type":"exact"}],"termid":"FYPO:0001605"}


id: PBO:0035714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035714"}


id: PBO:0062675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily C member 36","termid":"PBO:0062675"}


id: PBO:0029971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0029971"}


id: GO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The reduction of the ascorbate free radical to a stable form.","definition_xrefs":["GOC:mtg_electron_transport","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate stabilization (obsolete GO:0000044)","synonyms":[{"name":"ascorbate stabilization","type":"exact"},{"name":"vitamin C stabilization","type":"exact"}],"termid":"GO:0000044"}


id: GO:0090289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"osteoclast proliferation","termid":"GO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast proliferation","termid":"GO:0090289"}


id: FYPO:0000984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcriptional response to pheromone","synonyms":[{"name":"abnormal regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0000984"}


id: PBO:0079013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (anticodon TCA) 1-1","termid":"PBO:0079013"}


id: PBO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 39 subfamily A member 1","termid":"PBO:0044488"}


id: PBO:0028662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_slippage_during_replication_fork_processing","termid":"PBO:0028662"}


id: PBO:0076679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 4","termid":"PBO:0076679"}


id: GO:0035355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex containing Toll-like receptor 2 (TLR2) and Toll-like receptor 6 (TLR6).","definition_xrefs":["GOC:signaling","PMID:21481769","PMID:19931471","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Toll-like receptor 2-Toll-like receptor 6 protein complex","secondary_identifiers":["GO:0038126"],"synonyms":[{"name":"TLR2-TLR6 protein complex","type":"exact"},{"name":"TLR2:TLR6 heterodimer","type":"exact"},{"name":"TLR6:TLR2 complex","type":"exact"},{"name":"toll-like receptor TLR6:TLR2 heterodimeric complex","type":"exact"}],"termid":"GO:0035355"}


id: GO:0035696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a monocyte from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000576","PMID:10657654","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte extravasation","termid":"GO:0035696"}


id: GO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amine oxidase activity","termid":"GO:0008131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-amino-acid oxidase activity","secondary_identifiers":["MetaCyc:L-AMINO-ACID-OXIDASE-RXN","Reactome:R-HSA-2160492","RHEA:13781"],"synonyms":[{"name":"L-amino-acid:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"ophio-amino-acid oxidase activity","type":"related"}],"termid":"GO:0001716"}


id: PBO:0078189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-2","termid":"PBO:0078189"}


id: GO:1900415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of fungal-type cell wall biogenesis.","definition_xrefs":["PMID:15509866","GOC:TermGenie","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900415)","synonyms":[{"name":"regulation of chitin- and beta-glucan-containing cell wall biogenesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900415"}


id: FYPO:0006447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cleavage furrow during vegetative growth","synonyms":[{"name":"abolished protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"protein absent from cleavage furrow during vegetative growth","type":"related"},{"name":"protein localization to cleavage furrow abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006447"}


id: GO:1901862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"negatively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle tissue development","synonyms":[{"name":"down regulation of muscle tissue development","type":"exact"},{"name":"down-regulation of muscle tissue development","type":"exact"},{"name":"downregulation of muscle tissue development","type":"exact"},{"name":"inhibition of muscle tissue development","type":"narrow"}],"termid":"GO:1901862"}


id: SO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heritable locus on a chromosome that is prone to DNA breakage.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile_site","termid":"SO:0002349"}


id: FYPO:0007138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, has an abnormally low volume, and contains more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable small multiseptate vegetative cell","synonyms":[{"name":"inviable small multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; small multiseptate vegetative cell","type":"exact"},{"name":"small inviable multiseptate cell during vegetative growth","type":"exact"},{"name":"small multiseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0007138"}


id: PBO:0090486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1","termid":"PBO:0090486"}


id: PBO:0071496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34","termid":"PBO:0071496"}


id: PBO:0057244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449a","termid":"PBO:0057244"}


id: PBO:0076746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 1","termid":"PBO:0076746"}


id: PR:O94564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A reticulon-4-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C1773.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.06c","secondary_identifiers":["UniProtKB:O94564"],"synonyms":[{"name":"Spom972h-RTN4IP1","type":"exact"}],"termid":"PR:O94564"}


id: PBO:0108952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STBD1 pseudogene 1","termid":"PBO:0108952"}


id: PBO:0039532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34C","termid":"PBO:0039532"}


id: GO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid inner membrane (obsolete GO:0031353)","synonyms":[{"name":"integral to plastid inner membrane","type":"narrow"}],"termid":"GO:0031353"}


id: PBO:0079690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 4A","termid":"PBO:0079690"}


id: GO:0110116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["PMID:16377567","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"}


id: PBO:0088892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoate-protein ligase A","termid":"PBO:0088892"}


id: PBO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp7 (predicted)","termid":"PBO:0003974"}


id: PBO:0068455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 31, pseudogene","termid":"PBO:0068455"}


id: PBO:0079933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA biogenesis phosphodiesterase 1","termid":"PBO:0079933"}


id: PBO:0073163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator","termid":"PBO:0073163"}


id: GO:0048486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["GOC:sr","FMA:9907","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parasympathetic nervous system development","termid":"GO:0048486"}


id: PBO:0087987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at position 38 or 39 in tRNA; also responsible for pseudouracil modification of some mRNAs; important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability","termid":"PBO:0087987"}


id: PBO:0040689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 1","termid":"PBO:0040689"}


id: PBO:0061497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuritin 1 like","termid":"PBO:0061497"}


id: PR:O94452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp1 gene.","definition_xrefs":["UniProtKB:O94452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.10","synonyms":[{"name":"Spom972h-mcp1","type":"exact"}],"termid":"PR:O94452"}


id: PBO:0064968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 22","termid":"PBO:0064968"}


id: PBO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain Dil1","termid":"PBO:0002660"}


id: PBO:0016553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85b (predicted)","termid":"PBO:0016553"}


id: PBO:0030989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning","termid":"PBO:0030989"}


id: GO:0047068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2) = 5,10-methylenetetrahydromethanopterin + H+.","definition_xrefs":["RHEA:20017","EC:1.12.98.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N5,N10-methenyltetrahydromethanopterin hydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04455","GO:0016947","MetaCyc:H2-METHYLENE-THMPT-DEHYDRO-RXN"],"synonyms":[{"name":"5,10-methenyltetrahydromethanopterin hydrogenase activity","type":"related"},{"name":"H(2)-dependent methylene-H(4)MPT dehydrogenase activity","type":"related"},{"name":"H(2)-forming N(5),N(10)-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"H2-dependent methylene-H4MPT dehydrogenase activity","type":"related"},{"name":"H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"N(5),N(10)-methenyltetrahydromethanopterin hydrogenase activity","type":"related"},{"name":"N5,N10-methylenetetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"hydrogen:5,10-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"hydrogen:N(5),N(10)-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"hydrogen:N5,N10-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"nonmetal hydrogenase activity","type":"related"}],"termid":"GO:0047068"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04818","PRO:DNx","PANTHER:PTHR11599:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: PBO:0007714
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifted","termid":"PBO:0007714"}


id: GO:1900178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of aflatoxin biosynthetic process","termid":"GO:1900177"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of aflatoxin biosynthetic process","synonyms":[{"name":"down regulation of aflatoxin anabolism","type":"exact"},{"name":"down regulation of aflatoxin biosynthesis","type":"exact"},{"name":"down regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"down regulation of aflatoxin formation","type":"exact"},{"name":"down regulation of aflatoxin synthesis","type":"exact"},{"name":"down-regulation of aflatoxin anabolism","type":"exact"},{"name":"down-regulation of aflatoxin biosynthesis","type":"exact"},{"name":"down-regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"down-regulation of aflatoxin formation","type":"exact"},{"name":"down-regulation of aflatoxin synthesis","type":"exact"},{"name":"downregulation of aflatoxin anabolism","type":"exact"},{"name":"downregulation of aflatoxin biosynthesis","type":"exact"},{"name":"downregulation of aflatoxin biosynthetic process","type":"exact"},{"name":"downregulation of aflatoxin formation","type":"exact"},{"name":"downregulation of aflatoxin synthesis","type":"exact"},{"name":"inhibition of aflatoxin anabolism","type":"narrow"},{"name":"inhibition of aflatoxin biosynthesis","type":"narrow"},{"name":"inhibition of aflatoxin biosynthetic process","type":"narrow"},{"name":"inhibition of aflatoxin formation","type":"narrow"},{"name":"inhibition of aflatoxin synthesis","type":"narrow"},{"name":"negative regulation of aflatoxin anabolism","type":"exact"},{"name":"negative regulation of aflatoxin biosynthesis","type":"exact"},{"name":"negative regulation of aflatoxin formation","type":"exact"},{"name":"negative regulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900178"}


id: GO:0019061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an incoming virus is disassembled in the host cell to release a replication-competent viral genome.","definition_xrefs":["PMID:8162442","GOC:plm","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uncoating of virus","synonyms":[{"name":"viral uncoating","type":"exact"}],"termid":"GO:0019061"}


id: PBO:0024848
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Cyclin knockout","termid":"PBO:0024848"}


id: PR:O94438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.04c","synonyms":[{"name":"S3aE-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps102","type":"exact"}],"termid":"PR:O94438"}


id: MOD:01941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0593#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asp)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01941"}


id: PBO:0034258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_equivalogy_relationship_with","termid":"PBO:0034258"}


id: PBO:0085596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; mutant has increased aneuploidy tolerance; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern, and bud at the distal pole; BUD9 has a paralog, BUD8, that arose from the whole genome duplication","termid":"PBO:0085596"}


id: PBO:0080261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 24 pseudogene","termid":"PBO:0080261"}


id: PBO:0058216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4508","termid":"PBO:0058216"}


id: PBO:0079722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin domain containing 2","termid":"PBO:0079722"}


id: PBO:0091300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091300"}


id: PBO:0054068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1415","termid":"PBO:0054068"}


id: PBO:0074184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 5","termid":"PBO:0074184"}


id: PBO:0067161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 214, pseudogene","termid":"PBO:0067161"}


id: PR:O60183
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sat1 gene.","definition_xrefs":["UniProtKB:O60183","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.08","synonyms":[{"name":"Spom972h-sat1","type":"exact"}],"termid":"PR:O60183"}


id: PBO:0066519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 4","termid":"PBO:0066519"}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: GO:0070126
data:
  {"annotated_genes":["SJAG_00308","SJAG_01518","SJAG_00286","SJAG_05221","SJAG_03232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91682,92121,94825,98237,100874],"is_not":false,"summary":null,"term":"GO:0070126"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome in a mitochondrion, usually in response to a termination codon (note that mitochondria use variants of the universal genetic code that differ between different taxa).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational termination","termid":"GO:0006415"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_01518":null,"SJAG_03232":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial translational termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial translation termination","type":"exact"}],"termid":"GO:0070126","terms_by_termid":{"GO:0070126":null}}


id: GO:0033580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid at the surface of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation at cell surface (obsolete GO:0033580)","synonyms":[{"name":"protein amino acid galactosylation at cell surface","type":"exact"}],"termid":"GO:0033580"}


id: GO:0052921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetone cyanohydrin = hydrogen cyanide + acetone.","definition_xrefs":["KEGG_REACTION:R01553","MetaCyc:ACETONE-CYANHYDRIN-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone-cyanohydrin acetone-lyase (cyanide-forming) activity (obsolete GO:0052921)","termid":"GO:0052921"}


id: PBO:0000678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim10 (predicted)","termid":"PBO:0000678"}


id: FYPO:0003102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0003102"}


id: PBO:0039593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 10","termid":"PBO:0039593"}


id: GO:0072557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, IPAF, NAIP and caspase-1, and includes among its functions the sensing of flagellin derived from Legionella pneumophila, Salmonella typhimurium, Pseudomonas aeruginosa and Shigella flexneri.","definition_xrefs":["PMID:20303873","GOC:add","GOC:BHF","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"IPAF inflammasome complex","termid":"GO:0072557"}


id: PBO:0079984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 22","termid":"PBO:0079984"}


id: PBO:0058878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10394","termid":"PBO:0058878"}


id: PBO:0005630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 2, Pre8 (predicted)","termid":"PBO:0005630"}


id: PBO:0083232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; contained completely within TEL07R","termid":"PBO:0083232"}


id: PBO:0111893
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC domain protein","termid":"PBO:0111893"}


id: PBO:0084885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial succinate-fumarate transporter; transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization","termid":"PBO:0084885"}


id: PBO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4 family interacting protein 1 pseudogene 1","termid":"PBO:0060672"}


id: GO:1904072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a presynaptic active zone into its constituent components.","definition_xrefs":["GOC:pr","GOC:TermGenie","ISBN:9780387325606","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone disassembly","synonyms":[{"name":"pre-synaptic active zone component disassembly","type":"narrow"},{"name":"pre-synaptic active zone disassembly","type":"exact"}],"termid":"GO:1904072"}


id: GO:1903413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:rl","PMID:21757002","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bile acid","termid":"GO:1903412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bile acid","termid":"GO:1903413"}


id: PBO:0066486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 3","termid":"PBO:0066486"}


id: PBO:0056576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microspherule protein 1","termid":"PBO:0056576"}


id: FYPO:0005045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes and decreased rate of mitotic spindle elongation","synonyms":[{"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes and decreased rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation with lagging chromosomes and decreased rate of spindle elongation during mitotic cell cycle","type":"related"},{"name":"lagging mitotic chromosomes with decreased rate of mitotic spindle elongation","type":"exact"},{"name":"lagging mitotic chromosomes with decreased spindle elongation rate","type":"exact"},{"name":"lagging mitotic sister chromatids, with decreased rate of mitotic spindle elongation","type":"exact"}],"termid":"FYPO:0005045"}


id: GO:1990748
data:
  {"annotated_genes":["SJAG_03653","SJAG_03476","SJAG_02988","SJAG_02515","SJAG_04788","SJAG_00614","SJAG_05256","SJAG_03316","SJAG_01995","SJAG_02010","SJAG_01457","SJAG_03288","SJAG_02973","SJAG_03166","SJAG_04063","SJAG_00219","SJAG_04404","SJAG_00903","SJAG_04608","SJAG_01734","SJAG_04823","SJAG_00489","SJAG_01404","SJAG_06611","SJAG_04632","SJAG_02907","SJAG_01651","SJAG_01351","SJAG_03497","SJAG_05181","SJAG_00179","SJAG_03303","SJAG_00365","SJAG_01973","SJAG_04674","SJAG_02106","SJAG_04953","SJAG_04399","SJAG_00668","SJAG_00141","SJAG_00270","SJAG_04242","SJAG_01162","SJAG_01596","SJAG_04403","SJAG_01628","SJAG_00988","SJAG_04516","SJAG_02630","SJAG_02247","SJAG_02960","SJAG_02599","SJAG_01199","SJAG_04726","SJAG_03797","SJAG_01216","SJAG_01344","SJAG_01612","SJAG_03108","SJAG_04125","SJAG_03494","SJAG_02276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84204,84208,84307,86321,88627,89299,89300,90853,90858,91127,91197,93283,94547,95181,95367,96002,96213,96488,97971,98965,99037,99796,102777,104900,108470,109195,109647,109685,110767,110863,112286,114296,114726,114864],"is_not":false,"summary":null,"term":"GO:1990748"},{"annotations":[108912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110095"},{"annotations":[93548,89481,93232,93193,114322,104611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"},{"annotations":[96984,109925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140114"},{"annotations":[113510,96158,114407,91374,105015,101206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[101209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[98389,83638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070458"},{"annotations":[67855,67854,67299,63054,64748,67856,91375,67853,57306,64749,101387,101471,102965,57307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098869"},{"annotations":[99653,91718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[89310,106324,58059,67592,85614,96319,106279,64561,85198,95439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a toxic substance. These may include transport of the toxic substance away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"cellular response to toxic substance","termid":"GO:0097237"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03653":null,"SJAG_03797":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1990748","terms_by_termid":{"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110095":null,"GO:0140041":null,"GO:0140114":null,"GO:1990748":null}}


id: GO:0110080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["GOC:rph","PMID:27748453","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of placenta blood vessel development","termid":"GO:0110079"},{"relation_name":"positively_regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of placenta blood vessel development","termid":"GO:0110080"}


id: PBO:0048184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor-associated protein","termid":"PBO:0048184"}


id: PBO:0082181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC kinase; phosphorylated by cAMP-dependent protein kinase (PKA) in a TORC1-dependent manner; directly phosphorylated by TORC1; phosphorylates ribosomal protein Rps6a/b (S6), in a TORC-dependent manner; undergoes autophosphorylation","termid":"PBO:0082181"}


id: PBO:0003332
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CocKayNe syndrome 1","termid":"PBO:0003332"}


id: PBO:0071215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 56","termid":"PBO:0071215"}


id: GO:0016467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.3","TC:3.A.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating F-type ATPase activity (obsolete GO:0016467)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"F1-ATPase activity","type":"exact"},{"name":"hydrogen-translocating F-type ATPase activity","type":"exact"},{"name":"proton-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016467"}


id: PBO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX39B antisense RNA 1","termid":"PBO:0044754"}


id: GO:0016998
data:
  {"annotated_genes":["SJAG_03013","SJAG_00620","SJAG_00667","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97678,87949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[90205,96306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_00667":null,"SJAG_01017":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044039"],"synonyms":[{"name":"cell wall breakdown","type":"related"},{"name":"cell wall catabolism","type":"related"},{"name":"cell wall degradation","type":"related"},{"name":"cellular cell wall macromolecule breakdown","type":"exact"},{"name":"cellular cell wall macromolecule catabolic process","type":"exact"},{"name":"cellular cell wall macromolecule catabolism","type":"exact"},{"name":"cellular cell wall macromolecule degradation","type":"exact"}],"termid":"GO:0016998","terms_by_termid":{"GO:0034232":null,"GO:0044347":null}}


id: PBO:0062942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4","termid":"PBO:0062942"}


id: GO:0015631
data:
  {"annotated_genes":["SJAG_01613","SJAG_01760","SJAG_02624","SJAG_00851","SJAG_04841","SJAG_00930","SJAG_02336","SJAG_02795","SJAG_01297","SJAG_01546","SJAG_00332","SJAG_02384","SJAG_00723","SJAG_03073","SJAG_00773","SJAG_02270","SJAG_04074","SJAG_02848","SJAG_02814","SJAG_02609","SJAG_03835","SJAG_03540","SJAG_02045","SJAG_02040","SJAG_04745","SJAG_02656","SJAG_00042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75755,66191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048487"},{"annotations":[78718,65718,75742,67511,75478,59036,72817,61056,77885,68110,61816,63392,75016,75815,73141,63437,75298,58570,76129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008017"},{"annotations":[70817,70241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[64752,69569,67624,78862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of tubulin, including microtubules.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02270":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04074":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674","GO:0008092"],"is_obsolete":false,"name":"tubulin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015631","terms_by_termid":{"GO:0008017":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null}}


id: PR:O94392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2H10.01 gene.","definition_xrefs":["UniProtKB:O94392","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C2H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2H10.01","synonyms":[{"name":"Spom972h-SPAC2H10.01","type":"exact"}],"termid":"PR:O94392"}


id: GO:0051097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a helicase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of helicase activity","termid":"GO:0051095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of helicase activity","synonyms":[{"name":"down regulation of helicase activity","type":"exact"},{"name":"down-regulation of helicase activity","type":"exact"},{"name":"downregulation of helicase activity","type":"exact"},{"name":"inhibition of helicase activity","type":"narrow"}],"termid":"GO:0051097"}


id: GO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GARP complex.","definition_xrefs":["PMID:20163565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GARP complex binding","termid":"GO:0062069"}


id: PR:O94603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epe1 gene.","definition_xrefs":["UniProtKB:O94603","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.16c","synonyms":[{"name":"Spom972h-epe1","type":"exact"},{"name":"[Histone-H3]-lysine-36 demethylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heterochromatin-destabilizing protein epe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94603"}


id: GO:0031984
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process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"organelle 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organelle organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of organelle organisation","type":"exact"},{"name":"positive regulation of organelle organization and biogenesis","type":"related"}],"termid":"GO:0010638","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0031117":null,"GO:0031453":null,"GO:0032215":null,"GO:0045842":null,"GO:0061191":null,"GO:0090055":null,"GO:0090141":null,"GO:0110161":null,"GO:0140499":null,"GO:0140501":null,"GO:1901098":null,"GO:1902426":null,"GO:1902846":null,"GO:1903373":null,"GO:1903380":null,"GO:1903473":null,"GO:1903501":null,"GO:1903599":null,"GO:1905561":null,"GO:2000786":null}}


id: PBO:0064039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 73","termid":"PBO:0064039"}


id: MOD:01594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-113 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01594"}


id: PBO:0028503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0028503"}


id: GO:1903042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte hypertrophy.","definition_xrefs":["GOC:TermGenie","PMID:23928032","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of chondrocyte development","termid":"GO:0061182"},{"relation_name":"is_a","term_name":"regulation of chondrocyte hypertrophy","termid":"GO:1903041"},{"relation_name":"negatively_regulates","term_name":"chondrocyte hypertrophy","termid":"GO:0003415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte hypertrophy","synonyms":[{"name":"down regulation of chondrocyte hypertrophy","type":"exact"},{"name":"down-regulation of chondrocyte hypertrophy","type":"exact"},{"name":"downregulation of chondrocyte hypertrophy","type":"exact"},{"name":"inhibition of chondrocyte hypertrophy","type":"narrow"}],"termid":"GO:1903042"}


id: PBO:0027031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_envelope","termid":"PBO:0027031"}


id: PBO:0056426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 1","termid":"PBO:0056426"}


id: GO:0102539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-alpha-D-fucosamine + NAD(P) = UDP-2-acetamido-4-dehydro-2,6-dideoxy-beta-D-glucose + H+ + NAD(P)H.","definition_xrefs":["PMID:10627048","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetyl-alpha-D-fucosamine dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-14769"],"termid":"GO:0102539"}


id: GO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"5-carbamoylmethyl uridine residue modification","synonyms":[{"name":"5-carbamoylmethyluridine metabolic process","type":"related"}],"termid":"GO:0080178"}


id: PBO:0030681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell","termid":"PBO:0030681"}


id: PBO:0074289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 4","termid":"PBO:0074289"}


id: PBO:0054639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2044","termid":"PBO:0054639"}


id: PBO:0110321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1 (ABCC1 blood group)","termid":"PBO:0110321"}


id: PR:O74345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.05c","synonyms":[{"name":"Spom972h-ucp3","type":"exact"}],"termid":"PR:O74345"}


id: PBO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_positioning_in_heterochromatin","termid":"PBO:0030990"}


id: GO:0009341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses beta-galactosidase activity, i.e. catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. In E. coli, the complex is a homotetramer; dimeric and hexameric beta-galactosidase complexes have been observed in other species.","definition_xrefs":["PMID:15950161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"beta-galactosidase complex","termid":"GO:0009341"}


id: PBO:0061656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear GTPase, germinal center associated","termid":"PBO:0061656"}


id: GO:0006115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanol biosynthetic process","synonyms":[{"name":"ethanol anabolism","type":"exact"},{"name":"ethanol biosynthesis","type":"exact"},{"name":"ethanol formation","type":"exact"},{"name":"ethanol synthesis","type":"exact"}],"termid":"GO:0006115"}


id: GO:1900863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"},{"relation_name":"positively_regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of cordyol C biosynthetic process","synonyms":[{"name":"activation of cordyol C biosynthetic process","type":"narrow"},{"name":"up regulation of cordyol C biosynthetic process","type":"exact"},{"name":"up-regulation of cordyol C biosynthetic process","type":"exact"},{"name":"upregulation of cordyol C biosynthetic process","type":"exact"}],"termid":"GO:1900863"}


id: PBO:0070594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 61","termid":"PBO:0070594"}


id: PBO:0067160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 213, pseudogene","termid":"PBO:0067160"}


id: GO:0106174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a phagolysosome.","definition_xrefs":["GOC:pde","PMID:29471269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"is_a","term_name":"phagocytic vesicle lumen","termid":"GO:0097013"},{"relation_name":"part_of","term_name":"phagolysosome","termid":"GO:0032010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"phagolysosome vesicle lumen","termid":"GO:0106174"}


id: PBO:0068362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 144B","termid":"PBO:0068362"}


id: GO:1904809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule transport.","definition_xrefs":["GO_REF:0000058","PMID:22699897","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dense core granule transport","synonyms":[{"name":"regulation of dense core vesicle transport","type":"exact"}],"termid":"GO:1904809"}


id: PBO:0005030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mde7","termid":"PBO:0005030"}


id: GO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the basement membrane, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["PMID:28228250","PMID:26610918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"basement membrane constituent secretion","termid":"GO:0061864"}


id: GO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation involved in immune response","synonyms":[{"name":"alpha-beta T cell activation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte activation during immune response","type":"related"},{"name":"alpha-beta T-cell activation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002287"}


id: GO:0010824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"regulates","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of centrosome duplication","termid":"GO:0010824"}


id: GO:1905360
data:
  {"annotated_genes":["SJAG_00514","SJAG_00845","SJAG_03453","SJAG_00596","SJAG_02233","SJAG_03081","SJAG_03371","SJAG_02444","SJAG_04026","SJAG_01794","SJAG_04266","SJAG_00457","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84108,99867,100690,87031,89653,86057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071521"},{"annotations":[105445,114483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990131"},{"annotations":[90402,110011,105196,103306,102660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of GTPase activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","GOC:bhm","PMID:9178006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00845":null,"SJAG_01794":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_04026":null,"SJAG_04266":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GTPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HRAS-SOS1 complex","type":"narrow"},{"name":"RASH-SOS1 complex","type":"narrow"}],"termid":"GO:1905360","terms_by_termid":{"GO:0005834":null,"GO:0071521":null,"GO:1990131":null}}


id: PBO:0077487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 207","termid":"PBO:0077487"}


id: PBO:0003727
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates genes required for anaerobic growth under oxygen-limiting conditions","termid":"PBO:0003727"}


id: PBO:0036406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Met7 (predicted)","termid":"PBO:0036406"}


id: GO:0042451
data:
  {"annotated_genes":["SJAG_00044","SJAG_06634","SJAG_01070","SJAG_01859","SJAG_00134","SJAG_03096","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[113000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[85984,112002,89942,89720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine nucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside anabolism","type":"exact"},{"name":"purine nucleoside biosynthesis","type":"exact"},{"name":"purine nucleoside formation","type":"exact"},{"name":"purine nucleoside synthesis","type":"exact"}],"termid":"GO:0042451","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null}}


id: GO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine cyclase activity (obsolete GO:0018128)","secondary_identifiers":["EC:4.2.1.-"],"synonyms":[{"name":"peptidyl-serine cyclase activity","type":"exact"}],"termid":"GO:0018128"}


id: GO:0140908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 122) = CoA + histone H3 N6-acetyl-L-lysine (position 122).","definition_xrefs":["PMID:23415232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0140096","GO:0034212","GO:0016746"],"is_obsolete":false,"name":"histone H3K122 acetyltransferase activity","synonyms":[{"name":"histone H3-K122 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K122 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K122 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K122 specific)","type":"exact"}],"termid":"GO:0140908"}


id: PBO:0068593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 44, pseudogene","termid":"PBO:0068593"}


id: FYPO:0006978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular coenzyme Q10 level","synonyms":[{"name":"decreased cellular UQ10 level","type":"exact"},{"name":"decreased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"decreased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"decreased cellular ubiquinone 10 level","type":"exact"},{"name":"reduced cellular coenzyme Q10 level","type":"exact"}],"termid":"FYPO:0006978"}


id: GO:0007481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the haltere disc are generated and organized. This includes the transformation of a haltere imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"haltere disc development","termid":"GO:0035216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere disc morphogenesis","synonyms":[{"name":"haltere disc metamorphosis","type":"exact"}],"termid":"GO:0007481"}


id: PBO:0069143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 394, pseudogene","termid":"PBO:0069143"}


id: GO:0044826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The insertion into a host genome of viral DNA, usually by the action of an integrase enzyme. Once integrated, the provirus persists in the host cell and serves as a template for the transcription of viral genes and replication of the viral genome, leading to the production of new viruses.","definition_xrefs":["PMID:19091057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome integration into host DNA","synonyms":[{"name":"viral genome integration","type":"exact"}],"termid":"GO:0044826"}


id: MOD:00617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 3x(2)H labeled residue methyl ester.","definition_xrefs":["OMSSA:21","Unimod:298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H residue methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"ctermpeptrideuteromethyl","type":"exact"},{"name":"deuterated methyl ester","type":"related"}],"termid":"MOD:00617"}


id: GO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an arbuscule, a fine, tree-like hyphal symbiont structure projected into the host cell for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of arbuscule for nutrient acquisition","synonyms":[{"name":"formation by symbiont of arbuscule for nutrient acquisition from host","type":"related"}],"termid":"GO:0075328"}


id: PBO:0063213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCCA antisense RNA 1","termid":"PBO:0063213"}


id: GO:0000159
data:
  {"annotated_genes":["SJAG_00078","SJAG_03353","SJAG_00229","SJAG_00600","SJAG_03681","SJAG_00526","SJAG_01270"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86169,89101,94034,95749,97436,100664,112063],"is_not":false,"summary":null,"term":"GO:0000159"}]},"cv_name":"cellular_component","definition":"A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.","definition_xrefs":["PMID:17245430","GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_01270":null,"SJAG_03353":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein phosphatase type 2A complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PP2A complex","type":"exact"},{"name":"PP2A-pi","type":"narrow"},{"name":"PP2a-protector","type":"narrow"},{"name":"protein phosphatase 2 complex","type":"related"}],"termid":"GO:0000159","terms_by_termid":{"GO:0000159":null}}


id: GO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cellular protein complex assembly that results in the formation of a voltage-gated calcium channel complex.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"voltage-gated calcium channel complex assembly","termid":"GO:0070978"}


id: FYPO:0001658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of valine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal valine import","synonyms":[{"name":"abnormal L-valine import","type":"exact"},{"name":"abnormal L-valine import across plasma membrane","type":"exact"},{"name":"abnormal valine import during mitotic cell cycle","type":"related"},{"name":"abnormal valine import during vegetative growth","type":"exact"},{"name":"abnormal valine import into cell","type":"exact"},{"name":"abnormal valine uptake","type":"exact"}],"termid":"FYPO:0001658"}


id: PBO:0049726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 7","termid":"PBO:0049726"}


id: PBO:0075081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 131","termid":"PBO:0075081"}


id: GO:0075136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host","synonyms":[{"name":"response of symbiont to host","type":"related"}],"termid":"GO:0075136"}


id: PR:Q9Y7P4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein rml2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.15","secondary_identifiers":["UniProtKB:Q9Y7P4"],"synonyms":[{"name":"L2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rplB","type":"exact"}],"termid":"PR:Q9Y7P4"}


id: PBO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induced_by","termid":"PBO:0034361"}


id: GO:1990280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:dos","PMID:22582262","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization to chromatin","synonyms":[{"name":"RNA localisation to chromatin","type":"exact"}],"termid":"GO:1990280"}


id: GO:0160002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}


id: FYPO:0002502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"},{"relation_name":"is_a","term_name":"normal protein palmitoylation","termid":"FYPO:0002500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein palmitoylation during vegetative growth","synonyms":[{"name":"normal protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide palmitoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002502"}


id: PBO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1772 family protein","termid":"PBO:0003114"}


id: PBO:0076897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 51","termid":"PBO:0076897"}


id: PATO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in a bearer by virtue of the bearer's ability to convey electricity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electrical_conduction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conductivity","termid":"PATO:0001585"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electrical conductivity","termid":"PATO:0001757"}


id: PBO:0086177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the nuclear import and biogenesis of RNA pol II; conflicting evidence on whether null mutant is viable with elongated buds, or inviable; interacts with Rpb2, Rpb3, Nup116p, Nup100p and components of the R2TP complex (Rvb1p, Rvb2p, Pih1p); similar to human TMCO7 gene","termid":"PBO:0086177"}


id: GO:0031133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection size","termid":"GO:0032536"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon diameter","termid":"GO:0031133"}


id: PBO:0042450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 3","termid":"PBO:0042450"}


id: PBO:0076227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit","termid":"PBO:0076227"}


id: PBO:0038340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_transport_path","termid":"PBO:0038340"}


id: FYPO:0003493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hypothemycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to hypothemycin","synonyms":[{"name":"resistance to hypothemycin during mitotic cell cycle","type":"related"},{"name":"resistance to hypothemycin during vegetative growth","type":"exact"},{"name":"resistant to hypothemycin","type":"exact"}],"termid":"FYPO:0003493"}


id: PBO:0049247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRPEL2 pseudogene 1","termid":"PBO:0049247"}


id: PBO:0078731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-3","termid":"PBO:0078731"}


id: GO:0009706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"chloroplast membrane","termid":"GO:0031969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast inner membrane","synonyms":[{"name":"chloroplast inner envelope","type":"exact"}],"termid":"GO:0009706"}


id: GO:0060865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand and contributing to the decrease in the rate or frequency of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signaling pathway (obsolete GO:0060865)","synonyms":[{"name":"negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0060865"}


id: PBO:0036523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, galactose-specific flocculin Gsf2","termid":"PBO:0036523"}


id: PBO:0026666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_cell","termid":"PBO:0026666"}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: GO:0070997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of cell death in a neuron.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete neuron death (obsolete GO:0070997)","synonyms":[{"name":"neuron cell death","type":"exact"},{"name":"neuronal cell death","type":"exact"}],"termid":"GO:0070997"}


id: GO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system development","termid":"GO:0051962"},{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"positively_regulates","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of synapse assembly","synonyms":[{"name":"activation of synapse assembly","type":"narrow"},{"name":"positive regulation of synapse biogenesis","type":"exact"},{"name":"positive regulation of synaptogenesis","type":"exact"},{"name":"stimulation of synapse assembly","type":"narrow"},{"name":"up regulation of synapse assembly","type":"exact"},{"name":"up-regulation of synapse assembly","type":"exact"},{"name":"upregulation of synapse assembly","type":"exact"}],"termid":"GO:0051965"}


id: FYPO:0004966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of horsetail movement is longer than normal. Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["GO:0030989","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal horsetail movement","termid":"FYPO:0000197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of horsetail movement","synonyms":[{"name":"increased duration of dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"increased duration of horsetail nuclear movement","type":"exact"},{"name":"prolonged horsetail movement","type":"exact"}],"termid":"FYPO:0004966"}


id: PBO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh6 (predicted)","termid":"PBO:0002032"}


id: PR:O94669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apm3 gene.","definition_xrefs":["UniProtKB:O94669","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 complex subunit mu (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.11c","synonyms":[{"name":"Spom972h-apm3","type":"exact"},{"name":"adaptor-related protein complex 3 subunit mu (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94669"}


id: PBO:0043723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 2","termid":"PBO:0043723"}


id: PBO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 21 pseudogene","termid":"PBO:0062089"}


id: GO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate.","definition_xrefs":["EC:3.1.6.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"N-acetylgalactosamine-4-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-9036065","Wikipedia:Arylsulfatase_B","Reactome:R-HSA-2282889","Reactome:R-HSA-1606789","MetaCyc:3.1.6.12-RXN","Reactome:R-HSA-1793207"],"synonyms":[{"name":"N-acetyl-D-galactosamine-4-sulfate 4-sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine 4-sulfate sulfohydrolase activity","type":"related"},{"name":"N-acetylgalactosamine-4-sulphatase activity","type":"exact"},{"name":"acetylgalactosamine 4-sulfatase activity","type":"related"},{"name":"arylsulfatase B","type":"exact"},{"name":"chondroitinsulfatase","type":"broad"}],"termid":"GO:0003943"}


id: GO:0051731
data:
  {"annotated_genes":["SJAG_01979","SJAG_03789","SJAG_02680","SJAG_01791","SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114687],"is_not":false,"summary":null,"term":"GO:0051731"},{"annotations":[84363,89885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[89652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"},{"annotations":[86851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NTP + 5'-dephosphopolynucleotide = NDP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00956":null,"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-dephosphopolynucleotide kinase activity","type":"exact"},{"name":"5'-hydroxyl polynucleotide kinase activity","type":"exact"},{"name":"PNK","type":"related"},{"name":"polynucleotide 5'-hydroxy-kinase activity","type":"exact"},{"name":"polynucleotide 5'-hydroxyl kinase (phosphorylating) activity","type":"exact"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051731","terms_by_termid":{"GO:0046404":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null}}


id: PR:O42912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tad1 gene.","definition_xrefs":["UniProtKB:O42912","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.06","synonyms":[{"name":"Spom972h-tad1","type":"exact"},{"name":"tRNA-specific adenosine-37 deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42912"}


id: FYPO:0000677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which protein localization to the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to prospore membrane","synonyms":[{"name":"abnormal protein localisation to prospore membrane","type":"exact"},{"name":"abnormal protein localization to forespore membrane","type":"exact"}],"termid":"FYPO:0000677"}


id: PATO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000041 absolutedistance (obsolete PATO:0000041)","termid":"PATO:0000041"}


id: GO:0052035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host inflammatory response (obsolete GO:0052035)","synonyms":[{"name":"activation by symbiont of host inflammatory response","type":"narrow"},{"name":"positive regulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host inflammatory response","type":"narrow"},{"name":"up regulation by symbiont of host inflammatory response","type":"exact"},{"name":"up-regulation by symbiont of host inflammatory response","type":"exact"},{"name":"upregulation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052035"}


id: GO:0030389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine metabolic process","synonyms":[{"name":"fructosamine metabolism","type":"exact"}],"termid":"GO:0030389"}


id: PBO:0080532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASHC3 pseudogene 1","termid":"PBO:0080532"}


id: GO:0042402
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring at the level of individual cells resulting in the breakdown of biogenic amines, any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters.","definition_xrefs":["GOC:go_curators","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine catabolic process","termid":"GO:0009310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular biogenic amine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"biogenic amine breakdown","type":"exact"},{"name":"biogenic amine catabolism","type":"exact"},{"name":"biogenic amine degradation","type":"exact"}],"termid":"GO:0042402","terms_by_termid":{"GO:0009447":null}}


id: PBO:0040551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4","termid":"PBO:0040551"}


id: PATO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001039 absolute ratio (obsolete PATO:0001039)","termid":"PATO:0001039"}


id: PBO:0049207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 2A","termid":"PBO:0049207"}


id: PBO:0058539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6084","termid":"PBO:0058539"}


id: PBO:0017041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam11","termid":"PBO:0017041"}


id: PATO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000601 spatial value (obsolete PATO:0000601)","termid":"PATO:0000601"}


id: GO:0043930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle) as part of the primary follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"primary follicle stage","termid":"GO:0048160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in primary follicle stage","synonyms":[{"name":"primary ovarian follicle growth during primary follicle stage","type":"related"}],"termid":"GO:0043930"}


id: PBO:0056402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPT intronic transcript 1","termid":"PBO:0056402"}


id: GO:0048143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of an astrocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:10526094","PMID:12580336","PMID:9585813","PMID:12529254","PMID:10695728","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell activation","termid":"GO:0061900"},{"relation_name":"part_of","term_name":"astrocyte development","termid":"GO:0014002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte activation","termid":"GO:0048143"}


id: PBO:0050789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3C","termid":"PBO:0050789"}


id: PR:O13980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu29 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.05","synonyms":[{"name":"Spom972h-meu29","type":"exact"}],"termid":"PR:O13980"}


id: PBO:0080649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD and tetratricopeptide repeats 1","termid":"PBO:0080649"}


id: PBO:0056405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 3","termid":"PBO:0056405"}


id: PBO:0043111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHUK divergent transcript","termid":"PBO:0043111"}


id: GO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"}


id: PBO:0063628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 4","termid":"PBO:0063628"}


id: GO:0047562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxy-L-aspartate = glycine + glyoxylate.","definition_xrefs":["EC:4.1.3.14","RHEA:14377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyaspartate aldolase activity","secondary_identifiers":["KEGG_REACTION:R00478","MetaCyc:3-HYDROXYASPARTATE-ALDOLASE-RXN"],"synonyms":[{"name":"erythro-3-hydroxy-L(s)-aspartate glyoxylate-lyase activity","type":"related"},{"name":"erythro-3-hydroxy-Ls-aspartate glyoxylate-lyase (glycine-forming)","type":"related"},{"name":"erythro-3-hydroxy-Ls-aspartate glyoxylate-lyase activity","type":"related"},{"name":"erythro-beta-hydroxyaspartate aldolase activity","type":"related"},{"name":"erythro-beta-hydroxyaspartate glycine-lyase activity","type":"related"}],"termid":"GO:0047562"}


id: PBO:0056653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 20","termid":"PBO:0056653"}


id: GO:0097532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:BHF","PMID:10615049","PMID:19170886","GOC:go_curators","GOC:aa","GOC:rl","Wikipedia:Acid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to acid chemical","synonyms":[{"name":"response to acid stress","type":"broad"},{"name":"stress response to acid","type":"broad"}],"termid":"GO:0097532"}


id: PBO:0068506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 95, pseudogene","termid":"PBO:0068506"}


id: GO:0004810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + ATP + 2 CTP = a tRNA with a 3' CCA end + 3 diphosphate.","definition_xrefs":["PMID:2247609","RHEA:14433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase activity","secondary_identifiers":["EC:2.7.7.72","MetaCyc:TRNA-CYTIDYLYLTRANSFERASE-RXN","GO:0016437"],"synonyms":[{"name":"ATP(CTP)-tRNA nucleotidyltransferase","type":"broad"},{"name":"ATP(CTP):tRNA nucleotidyltransferase activity","type":"broad"},{"name":"CCA-adding enzyme activity","type":"related"},{"name":"CTP(ATP):tRNA nucleotidyltransferase","type":"broad"},{"name":"CTP:tRNA cytidylyltransferase activity","type":"broad"},{"name":"ribonucleic cytidylic cytidylic adenylic pyrophosphorylase","type":"broad"},{"name":"ribonucleic cytidylyltransferase","type":"broad"},{"name":"tRNA CCA-diphosphorylase activity","type":"related"},{"name":"tRNA adenylyl(cytidylyl)transferase","type":"broad"},{"name":"tRNA cytidylyltransferase activity","type":"related"},{"name":"tRNA-nucleotidyltransferase activity","type":"broad"},{"name":"transfer RNA adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate adenyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate nucleotidyltransferase","type":"broad"},{"name":"transfer ribonucleic acid nucleotidyl transferase","type":"broad"},{"name":"transfer ribonucleic adenylyl (cytidylyl) transferase","type":"broad"},{"name":"transfer ribonucleic-terminal trinucleotide nucleotidyltransferase","type":"broad"},{"name":"transfer-RNA nucleotidyltransferase","type":"broad"}],"termid":"GO:0004810"}


id: GO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gut peptide YY to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor activity","termid":"GO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"peptide YY receptor activity","termid":"GO:0001601"}


id: PATO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spiny","termid":"PATO:0001365"}


id: SO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A right handed helix is a region of peptide where the coiled conformation turns in a clockwise, right handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"right_handed_peptide_helix","secondary_identifiers":["BS:0000339"],"synonyms":[{"name":"helix","type":"related"},{"name":"right handed helix","type":"exact"}],"termid":"SO:0001116"}


id: MOD:01297
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 5x(13)C labeled L-proline.","definition_xrefs":["PubMed:12716131","Unimod:772#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C labeled L-proline","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01297"}


id: PBO:0078183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-7","termid":"PBO:0078183"}


id: PBO:0056894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIDEAS antisense RNA 1","termid":"PBO:0056894"}


id: FYPO:0008145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of  heme O measured in a cell is lower than normal.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of heme O in cell","synonyms":[{"name":"decreased heme O level","type":"exact"}],"termid":"FYPO:0008145"}


id: PBO:0069627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 904, pseudogene","termid":"PBO:0069627"}


id: PBO:0066848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 148","termid":"PBO:0066848"}


id: PBO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 25","termid":"PBO:0050115"}


id: GO:0014739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle hyperplasia.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hyperplasia","termid":"GO:0014738"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"positively_regulates","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle hyperplasia","termid":"GO:0014739"}


id: PBO:0059138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 5","termid":"PBO:0059138"}


id: PBO:0085792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; GFP-fusion protein is localized to the cytoplasm; transcription induced under conditions of zinc deficiency","termid":"PBO:0085792"}


id: PR:Q8NIP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIP8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.21","synonyms":[{"name":"Spom972h-wtf12","type":"exact"}],"termid":"PR:Q8NIP8"}


id: FYPO:0001685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to purvalanol A","synonyms":[{"name":"increased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"increased transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001685"}


id: FYPO:0007974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization occurs at a higher rate, or speed, than normal for microtubules with their plus ends inside the nuclear membrane bridge formed during mitotic anaphase B.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of interpolar microtubule polymerization inside the mitotic nuclear membrane bridge","termid":"FYPO:0007974"}


id: PBO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain protein","termid":"PBO:0000503"}


id: GO:0033191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-pyrone + oxalacetate = macrophomate.","definition_xrefs":["PMID:10984474","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016744","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"macrophomate synthase activity","termid":"GO:0033191"}


id: GO:0097706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to oscillatory fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:21768538","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to oscillatory fluid shear stress","termid":"GO:0097704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to oscillatory fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to oscillatory fluid shear stress","type":"exact"}],"termid":"GO:0097706"}


id: GO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose + phosphate = alpha-D-glucose 1-phosphate + D-glucose.","definition_xrefs":["EC:2.4.1.20","MetaCyc:CELLOBIOSE-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cellobiose phosphorylase activity","secondary_identifiers":["RHEA:19493"],"synonyms":[{"name":"cellobiose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047738"}


id: PBO:0040855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 1","termid":"PBO:0040855"}


id: GO:0018969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiocyanate, the anion of thiocyanic acid, a toxic cyanide derivative commonly formed as a by-product in the production of gas for fuel, coke, and substances for chemical industries.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thiocyanate metabolic process","secondary_identifiers":["MetaCyc:P581-PWY","UM-BBD_pathwayID:thc"],"synonyms":[{"name":"thiocyanate metabolism","type":"exact"},{"name":"thiocyanic acid metabolic process","type":"exact"},{"name":"thiocyanic acid metabolism","type":"exact"}],"termid":"GO:0018969"}


id: PBO:0047967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(X)(q28) E","termid":"PBO:0047967"}


id: GO:0160042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of purine nucleotides across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["PMID:18375752","PMID:27477609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"purine nucleotide uniporter activity","termid":"GO:0160042"}


id: GO:0160166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoadipate + H+ + N(6)-[(R)-lipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase] = CO2 + N(6)-[(R)-S(8)-glutaryldihydrolipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase].","definition_xrefs":["PMID:29191460","PMID:32695416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-oxoadipate dehydrogenase activity","secondary_identifiers":["RHEA:69576"],"termid":"GO:0160166"}


id: GO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the first alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["PMID:12829701","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of first mannose on A branch","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8A(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8A","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036511"}


id: PR:O59776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1795.12c gene.","definition_xrefs":["UniProtKB:O59776","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1795.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.12c","synonyms":[{"name":"Spom972h-SPCC1795.12c","type":"exact"}],"termid":"PR:O59776"}


id: PBO:0082294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginosuccinate synthetase; catalyzes the formation of L-argininosuccinate from citrulline and L-aspartate in the arginine biosynthesis pathway; potential Cdc28p substrate","termid":"PBO:0082294"}


id: FYPO:0000732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000120","FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"short bipolar mitotic spindle","synonyms":[{"name":"decreased mitotic spindle length","type":"exact"},{"name":"short mitotic spindle","type":"exact"},{"name":"short mitotic spindle during vegetative growth","type":"exact"},{"name":"short mitotic spindles","type":"exact"},{"name":"short spindle during mitosis","type":"exact"},{"name":"short spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000732"}


id: GO:0007622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that recur with measured regularity.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhythmic behavior","synonyms":[{"name":"rhythmic behavioral response to stimulus","type":"exact"},{"name":"rhythmic behaviour","type":"exact"},{"name":"rhythmic behavioural response to stimulus","type":"exact"}],"termid":"GO:0007622"}


id: PBO:0047956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(20)(p11.23)","termid":"PBO:0047956"}


id: PBO:0085409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane receptor for plant antifungal osmotin; involved in zinc ion homeostasis, apoptosis; negatively regulates ZRT1 and other functionally divergent genes through CCCTC promoter motif (IzRE); modulates FET3 activity in iron-independent manner; affects gene expression by influencing balance of competition between Msn2p/Msn4p and Nrg1p/Nrg2p for binding to IzRE; transcription regulated by Zap1p, zinc, fatty acid levels; homolog of mammalian adiponectin receptor","termid":"PBO:0085409"}


id: GO:0048856
data:
  {"annotated_genes":["SJAG_04853","SJAG_02736","SJAG_03581","SJAG_00405","SJAG_05309","SJAG_03587","SJAG_04901","SJAG_00993","SJAG_04859","SJAG_00821","SJAG_04509","SJAG_04922","SJAG_02700","SJAG_01531","SJAG_03013","SJAG_03090","SJAG_00826","SJAG_00663","SJAG_00514","SJAG_00114","SJAG_04483","SJAG_02864","SJAG_01321","SJAG_01943","SJAG_01662","SJAG_04470","SJAG_04615","SJAG_04275","SJAG_04238","SJAG_04140","SJAG_01993","SJAG_02241","SJAG_02320","SJAG_03746","SJAG_02248","SJAG_04010","SJAG_02712","SJAG_03915","SJAG_04080","SJAG_01017","SJAG_04781","SJAG_04184","SJAG_04868","SJAG_03250","SJAG_03483","SJAG_03057","SJAG_04236","SJAG_04271","SJAG_00974","SJAG_03536","SJAG_03557","SJAG_02169","SJAG_02529","SJAG_00971","SJAG_02989","SJAG_03688","SJAG_02718","SJAG_01483","SJAG_01894","SJAG_01769","SJAG_02392","SJAG_00486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92027,86071,90754],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[107492],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072316"},{"annotations":[92702,100301,106301,91550,96890,108889,110114,114659,101287,103900,93049,93117,107688],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[107493],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[90640],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[84442,110257,113913,86455,87948],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[100344,113914,113923,105259],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[84929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[106302,101138,105490,93764,87680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[95991,94997,115134,114660,87474,96059,114953,93724,91551,113085,93765,95990,101454,97878,110115,103562,106303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[95993,95992,103004,103901,99093,93725,88475,110116,100302,93050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[84125,90204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042815"},{"annotations":[90207,107494],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072000"},{"annotations":[84489,95067,95146,110494,88695,94467],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[107379],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[86927],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[98459],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86929],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88369],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[102181,112136,90681,95994,95995,96278],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure development","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"development of an anatomical structure","type":"exact"}],"termid":"GO:0048856","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0042815":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0025447
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea cycle disorders","termid":"PBO:0025447"}


id: FYPO:0004905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron homeostasis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Iron homeostasis RNAs are transcribed from genes whose products are involved in iron homeostasis.","definition_xrefs":["PomBase:mah","PMID:23314747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of iron homeostasis gene mRNA during vegetative growth","synonyms":[{"name":"decreased iron homeostasis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of iron homeostasis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of iron homeostasis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of iron homeostasis gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of iron homeostasis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004905"}


id: FYPO:0003372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during one or both meiotic nuclear divisions. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during meiotic cell cycle","termid":"FYPO:0006975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during meiosis","synonyms":[{"name":"RNA absent from cell during meiotic nuclear division","type":"exact"},{"name":"transcripts absent from cell during meiosis","type":"exact"},{"name":"undetectable cellular RNA level during meiosis","type":"exact"}],"termid":"FYPO:0003372"}


id: PBO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binding_phenotype","termid":"PBO:0030711"}


id: PBO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase (predicted)","termid":"PBO:0002234"}


id: PBO:0089684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop23","termid":"PBO:0089684"}


id: PBO:0069777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1061, pseudogene","termid":"PBO:0069777"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: PBO:0036374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-5A-deoxyhypusine synthase Dys1 (predicted)","termid":"PBO:0036374"}


id: GO:1904706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["PMID:23246467","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell proliferation","termid":"GO:0048662"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"down regulation of VSMC proliferation","type":"exact"},{"name":"down regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of VSMC proliferation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of VSMC proliferation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of VSMC proliferation","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of VSMC proliferation","type":"exact"},{"name":"negative regulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904706"}


id: PBO:0066927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 229","termid":"PBO:0066927"}


id: GO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the reduction of trimethylamine N-oxide to trimethylamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"trimethylamine-N-oxide reductase complex","termid":"GO:0009322"}


id: PBO:0086119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ethanol metabolism; induced by heat shock and localized to the inner mitochondrial membrane; homologous to mammalian peroxisomal membrane protein Mpv17; human homolog MPV17 is implicated in hepatocerebral mtDNA depletion syndromes (MDDS), and complements yeast null mutant","termid":"PBO:0086119"}


id: GO:0043322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of natural killer cell degranulation","termid":"GO:0043321"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"},{"relation_name":"negatively_regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of natural killer cell degranulation","synonyms":[{"name":"down regulation of natural killer cell degranulation","type":"exact"},{"name":"down-regulation of natural killer cell degranulation","type":"exact"},{"name":"downregulation of natural killer cell degranulation","type":"exact"},{"name":"inhibition of natural killer cell degranulation","type":"narrow"},{"name":"negative regulation of NK cell degranulation","type":"exact"},{"name":"negative regulation of NK cell granule exocytosis","type":"exact"},{"name":"negative regulation of natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043322"}


id: PBO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.101","termid":"PBO:0002487"}


id: PR:O60125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag101 gene.","definition_xrefs":["UniProtKB:O60125","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.11c","synonyms":[{"name":"BAG-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag101","type":"exact"}],"termid":"PR:O60125"}


id: PBO:0091869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate lyase superfamily, unknown specificity, bacterial 3-carboxy-cis,cis-muconate cycloisomerase related","termid":"PBO:0091869"}


id: GO:0007395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Dorsally-directed movement of a cell at the leading edge of the epithelium over the amnioserosa.","definition_xrefs":["PMID:12147138","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, spreading of leading edge cells","termid":"GO:0007395"}


id: GO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any chitobiose, a family of compounds derived from chitin and based on the structure of D-glucosaminyl-(1->4)-D-glucosamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitobiose metabolic process","termid":"GO:0052780"},{"relation_name":"is_a","term_name":"amino disaccharide catabolic process","termid":"GO:0052782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitobiose catabolic process","termid":"GO:0052781"}


id: GO:0071600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the otic vesicle are generated and organized. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"otic vesicle development","termid":"GO:0071599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle morphogenesis","termid":"GO:0071600"}


id: PBO:0053317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 51","termid":"PBO:0053317"}


id: PBO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 8 subfamily B member 1","termid":"PBO:0044470"}


id: MOD:00887
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to a methylated aspartic acid, such as aspartic acid 4-methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated aspartic acid","termid":"MOD:00887"}


id: PBO:0057934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3660","termid":"PBO:0057934"}


id: GO:0038102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting with an activin receptor complex to reduce the action of another ligand, the agonist. A receptor antagonist does not initiate signaling upon binding to a receptor, but instead blocks an agonist from binding to the receptor.","definition_xrefs":["GOC:signaling","PMID:15062104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098772","GO:0005515","GO:0140678"],"is_obsolete":false,"name":"activin receptor antagonist activity","termid":"GO:0038102"}


id: PBO:0031326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cycloheximide","termid":"PBO:0031326"}


id: GO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + O2 = pyridoxal + H2O2.","definition_xrefs":["EC:1.1.3.12","MetaCyc:PYRIDOXINE-4-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyridoxine 4-oxidase activity","secondary_identifiers":["RHEA:15033"],"synonyms":[{"name":"pyridoxin 4-oxidase activity","type":"related"},{"name":"pyridoxine:oxygen 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol 4-oxidase activity","type":"related"}],"termid":"GO:0050237"}


id: GO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"discadenine metabolic process","synonyms":[{"name":"discadenine metabolism","type":"exact"}],"termid":"GO:0034267"}


id: PBO:0070907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 15","termid":"PBO:0070907"}


id: PBO:0056437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 10","termid":"PBO:0056437"}


id: PBO:0082150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase; enzyme mainly responsible for the introduction of saturated very long chain fatty acids into neo-synthesized molecules of phosphatidylinositol; required for incorporation of stearic acid into phosphatidylinositol; affects chromosome stability when overexpressed; CST26 has a paralog, YDR018C, that arose from the whole genome duplication","termid":"PBO:0082150"}


id: GO:0044133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of a symbiont within the cells or tissues of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host (obsolete GO:0044133)","termid":"GO:0044133"}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["PMID:17161604","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: GO:0047642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-aldosyl1 beta-D-fructoside + D-aldose2 = D-aldose1 + alpha-D-aldosyl2 beta-D-fructoside.","definition_xrefs":["EC:2.4.1.162","MetaCyc:ALDOSE-BETA-FRUCTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"aldose beta-D-fructosyltransferase activity","synonyms":[{"name":"aldose b-D-fructosyltransferase activity","type":"exact"},{"name":"alpha-D-aldosyl-beta-D-fructoside:aldose 1-beta-D-fructosyltransferase activity","type":"related"}],"termid":"GO:0047642"}


id: GO:0102671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-6a-hydroxymaackiain + S-adenosyl-L-methionine = H+ + (+)-pisatin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.270","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"6a-hydroxymaackiain-3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4002","RHEA:35471"],"termid":"GO:0102671"}


id: PBO:0081081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 12","termid":"PBO:0081081"}


id: PBO:0070605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 73","termid":"PBO:0070605"}


id: PBO:0087261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase of the the RAM signaling network; Ndr/LATS family member; binds regulatory subunit Mob2p; involved in regulation of cellular morphogenesis, polarized growth, and septum destruction; phosphorylation by Cbk1p regulates localization and activity of Ace2p transcription factor and Ssd1p translational repressor; Cbk1p activity is regulated by both phosphorylation and specific localization; relocalizes to cytoplasm upon DNA replication stress","termid":"PBO:0087261"}


id: GO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion transport","synonyms":[{"name":"regulation of Na+ transport","type":"exact"},{"name":"regulation of sodium transport","type":"exact"}],"termid":"GO:0002028"}


id: PR:Q9Y7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA/RNA-binding protein KIN17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12805:SF0","PRO:DNx","OMA:SCHPO03308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIN17-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.09c","secondary_identifiers":["UniProtKB:Q9Y7X9"],"synonyms":[{"name":"Spom972h-KIN","type":"exact"}],"termid":"PR:Q9Y7X9"}


id: PBO:0055282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2709","termid":"PBO:0055282"}


id: PBO:0039076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 4","termid":"PBO:0039076"}


id: GO:0031159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mah","GOC:pg","PMID:5002049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregate size involved in sorocarp development","termid":"GO:0031157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"activation of aggregate size","type":"narrow"},{"name":"stimulation of aggregate size","type":"narrow"},{"name":"up regulation of aggregate size","type":"exact"},{"name":"up-regulation of aggregate size","type":"exact"},{"name":"upregulation of aggregate size","type":"exact"}],"termid":"GO:0031159"}


id: PBO:0041251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 167","termid":"PBO:0041251"}


id: PR:Q9C0X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.07c","synonyms":[{"name":"Spom972h-rrp12","type":"exact"}],"termid":"PR:Q9C0X8"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: PBO:0085242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; potential role in the secretory pathway; CPR8 has a paralog, CPR4, that arose from the whole genome duplication","termid":"PBO:0085242"}


id: GO:0007143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline.","definition_xrefs":["GOC:mah","GOC:ems","GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"female meiotic nuclear division","synonyms":[{"name":"female meiosis","type":"broad"},{"name":"female meiotic division","type":"broad"}],"termid":"GO:0007143"}


id: PBO:0080486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B1","termid":"PBO:0080486"}


id: PBO:0033826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase escort protein Mrs6 (predicted)","termid":"PBO:0033826"}


id: PBO:0090175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 6","termid":"PBO:0090175"}


id: PBO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF962 family protein","termid":"PBO:0002082"}


id: PBO:0091125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methyltransferase Oms1","termid":"PBO:0091125"}


id: PBO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCHS1 antisense RNA 1","termid":"PBO:0044627"}


id: PBO:0045727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 4","termid":"PBO:0045727"}


id: FYPO:0005780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic spindle assembly checkpoint is decreased. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072479","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased response to mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"decreased mitotic spindle assembly checkpoint during vegetative growth","type":"exact"},{"name":"decreased response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"decreased spindle assembly checkpoint during mitotic cell cycle","type":"exact"},{"name":"reduced response to mitotic spindle assembly checkpoint signaling","type":"exact"}],"termid":"FYPO:0005780"}


id: PBO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 3","termid":"PBO:0041903"}


id: GO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pectin + H2O = pectate + acetate. This reaction is the hydrolysis of acetyl esters of pectin, producing pectate, partially esterified pectin.","definition_xrefs":["PMID:9218776","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"pectin acetylesterase activity","termid":"GO:0052793"}


id: PBO:0059475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin","termid":"PBO:0059475"}


id: PBO:0005538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein coupled receptor Git3","termid":"PBO:0005538"}


id: GO:1903708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemopoiesis.","definition_xrefs":["GOC:pad","GOC:PARL","GO_REF:0000058","GOC:TermGenie","PMID:20080761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"positively_regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemopoiesis","synonyms":[{"name":"activation of blood cell biosynthesis","type":"narrow"},{"name":"activation of blood cell formation","type":"narrow"},{"name":"activation of haemopoiesis","type":"narrow"},{"name":"activation of hematopoiesis","type":"narrow"},{"name":"activation of hemopoiesis","type":"narrow"},{"name":"positive regulation of blood cell biosynthesis","type":"exact"},{"name":"positive regulation of blood cell formation","type":"exact"},{"name":"positive regulation of haemopoiesis","type":"exact"},{"name":"positive regulation of hematopoiesis","type":"exact"},{"name":"up regulation of blood cell biosynthesis","type":"exact"},{"name":"up regulation of blood cell formation","type":"exact"},{"name":"up regulation of haemopoiesis","type":"exact"},{"name":"up regulation of hematopoiesis","type":"exact"},{"name":"up regulation of hemopoiesis","type":"exact"},{"name":"up-regulation of blood cell biosynthesis","type":"exact"},{"name":"up-regulation of blood cell formation","type":"exact"},{"name":"up-regulation of haemopoiesis","type":"exact"},{"name":"up-regulation of hematopoiesis","type":"exact"},{"name":"up-regulation of hemopoiesis","type":"exact"},{"name":"upregulation of blood cell biosynthesis","type":"exact"},{"name":"upregulation of blood cell formation","type":"exact"},{"name":"upregulation of haemopoiesis","type":"exact"},{"name":"upregulation of hematopoiesis","type":"exact"},{"name":"upregulation of hemopoiesis","type":"exact"}],"termid":"GO:1903708"}


id: GO:0018872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arsonoacetate, a synthetic, organic compound containing a single arsenic atom. Arsonoacetate and other arsenic containing compounds are used in agricultural applications as animal feed additives, cotton defoliants and post-emergence grass herbicides.","definition_xrefs":["UM-BBD_pathwayID:ara"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arsonoacetate metabolic process","synonyms":[{"name":"arsonoacetate metabolism","type":"exact"}],"termid":"GO:0018872"}


id: PBO:0004516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase 1 (predicted)","termid":"PBO:0004516"}


id: SO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CGWGGWNGMM, bound by transcription factors related to RecA and found in promoters of genes expressed following several types of DNA damage or inhibition of DNA synthesis.","definition_xrefs":["PMID:8668127","PMID:11073995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE","synonyms":[{"name":"DNA damage response element","type":"exact"}],"termid":"SO:0001845"}


id: GO:0102897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abietal + NADPH + O2 = abietate + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"abietadienal hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-8510","RHEA:56928"],"termid":"GO:0102897"}


id: GO:0170005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of cyclic nucleotide phosphodiesterase.","definition_xrefs":["PMID:6087882","PMID:6259174","PMID:6667031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"cyclic nucleotide phosphodiesterase activator activity","termid":"GO:0170005"}


id: PBO:0027850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity","termid":"PBO:0027850"}


id: GO:0043871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delta1-piperideine-6-carboxylate + NAD+ + 2 H2O = 2-aminoadipate + NADH + H+. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["PMID:16237033","MetaCyc:RXN-8162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"delta1-piperideine-6-carboxylate dehydrogenase activity","secondary_identifiers":["RHEA:49476"],"synonyms":[{"name":"AmaB","type":"related"},{"name":"PIPOX","type":"related"}],"termid":"GO:0043871"}


id: PBO:0069831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1117, pseudogene","termid":"PBO:0069831"}


id: PBO:0068794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 31, pseudogene","termid":"PBO:0068794"}


id: PBO:0063661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 2","termid":"PBO:0063661"}


id: GO:0090708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of a plant organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ axis polarity","termid":"GO:0090708"}


id: PBO:0056272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2 pseudogene 1","termid":"PBO:0056272"}


id: PBO:0062989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin coregulated like","termid":"PBO:0062989"}


id: PBO:0080781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 1","termid":"PBO:0080781"}


id: PBO:0067984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 286","termid":"PBO:0067984"}


id: GO:0052379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent to which it enters into a second organism via the phagocytotic processes of the other organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of entry into other organism via phagocytosis involved in symbiotic interaction (obsolete GO:0052379)","synonyms":[{"name":"modulation by organism of entry into other organism via other organism phagocytosis during symbiotic interaction","type":"related"},{"name":"modulation by organism of entry into other organism via phagocytosis during symbiotic interaction","type":"related"}],"termid":"GO:0052379"}


id: PBO:0040717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF chromatin remodeling complex subunit BCL7C","termid":"PBO:0040717"}


id: FYPO:0001645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein-protein interaction","secondary_identifiers":["FYPO:0004636"],"synonyms":[{"name":"decreased protein binding","type":"exact"},{"name":"reduced protein-protein interaction","type":"exact"}],"termid":"FYPO:0001645"}


id: PATO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000748 discrimination value (obsolete PATO:0000748)","termid":"PATO:0000748"}


id: PBO:0028873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(A)_tail_length","termid":"PBO:0028873"}


id: GO:0000339
data:
  {"annotated_genes":["SJAG_03223","SJAG_01625","SJAG_01064","SJAG_04360","SJAG_00507","SJAG_01830","SJAG_05010","SJAG_04880"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63380,99166],"is_not":false,"summary":null,"term":"GO:0000339"},{"annotations":[87737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098808"},{"annotations":[95934,100929,111537,86112,109662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01064":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null,"SJAG_04880":null,"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA cap binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"binding to mRNA cap","type":"narrow"},{"name":"mRNA cap binding","type":"narrow"},{"name":"snRNA cap binding","type":"narrow"}],"termid":"GO:0000339","terms_by_termid":{"GO:0000339":null,"GO:0000340":null,"GO:0098808":null}}


id: PBO:0055998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated pseudogene 1","termid":"PBO:0055998"}


id: PBO:0043017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 1","termid":"PBO:0043017"}


id: GO:1905376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:26722473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"is_a","term_name":"negative regulation of electron transfer activity","termid":"GO:1904733"},{"relation_name":"is_a","term_name":"regulation of cytochrome-c oxidase activity","termid":"GO:1904959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytochrome-c oxidase activity","synonyms":[{"name":"down regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"down regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"down regulation of cytochrome a3 activity","type":"narrow"},{"name":"down regulation of cytochrome aa3 activity","type":"narrow"},{"name":"down regulation of cytochrome c oxidase activity","type":"exact"},{"name":"down regulation of cytochrome oxidase activity","type":"related"},{"name":"down regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"down regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"down regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"down regulation of indophenol oxidase","type":"narrow"},{"name":"down regulation of indophenolase","type":"narrow"},{"name":"down regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"down-regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"down-regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"down-regulation of cytochrome a3 activity","type":"narrow"},{"name":"down-regulation of cytochrome aa3 activity","type":"narrow"},{"name":"down-regulation of cytochrome c oxidase activity","type":"exact"},{"name":"down-regulation of cytochrome oxidase activity","type":"related"},{"name":"down-regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"down-regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"down-regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"down-regulation of indophenol oxidase","type":"narrow"},{"name":"down-regulation of indophenolase","type":"narrow"},{"name":"down-regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"downregulation of NADH cytochrome c oxidase","type":"exact"},{"name":"downregulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"downregulation of cytochrome a3 activity","type":"narrow"},{"name":"downregulation of cytochrome aa3 activity","type":"narrow"},{"name":"downregulation of cytochrome c oxidase activity","type":"exact"},{"name":"downregulation of cytochrome oxidase activity","type":"related"},{"name":"downregulation of cytochrome-c oxidase activity","type":"exact"},{"name":"downregulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"downregulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"downregulation of indophenol oxidase","type":"narrow"},{"name":"downregulation of indophenolase","type":"narrow"},{"name":"downregulation of warburg's respiratory enzyme activity","type":"related"},{"name":"inhibition of NADH cytochrome c oxidase","type":"narrow"},{"name":"inhibition of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"inhibition of cytochrome a3 activity","type":"narrow"},{"name":"inhibition of cytochrome aa3 activity","type":"narrow"},{"name":"inhibition of cytochrome c oxidase activity","type":"narrow"},{"name":"inhibition of cytochrome oxidase activity","type":"related"},{"name":"inhibition of cytochrome-c oxidase activity","type":"narrow"},{"name":"inhibition of ferrocytochrome c oxidase","type":"narrow"},{"name":"inhibition of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"inhibition of indophenol oxidase","type":"narrow"},{"name":"inhibition of indophenolase","type":"narrow"},{"name":"inhibition of warburg's respiratory enzyme activity","type":"related"},{"name":"negative regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"negative regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"negative regulation of cytochrome a3 activity","type":"narrow"},{"name":"negative regulation of cytochrome aa3 activity","type":"narrow"},{"name":"negative regulation of cytochrome c oxidase activity","type":"exact"},{"name":"negative regulation of cytochrome oxidase activity","type":"related"},{"name":"negative regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"negative regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"negative regulation of indophenol oxidase","type":"narrow"},{"name":"negative regulation of indophenolase","type":"narrow"},{"name":"negative regulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1905376"}


id: PBO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/TPR domain protein DNAJC7 family","termid":"PBO:0004896"}


id: PBO:0058755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6879","termid":"PBO:0058755"}


id: GO:0070024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell surface signaling molecule CD19, the Ras guanine nucleotide exchange factor Vav, and the regulatory subunit alpha of phosphatidylinositol 3-kinase (PI3K).","definition_xrefs":["PMID:7528218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"CD19-Vav-PIK3R1 complex","synonyms":[{"name":"CD19-Vav-PI 3-kinase (p85 subunit) complex","type":"exact"}],"termid":"GO:0070024"}


id: GO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of gelatin type I and collagen types IV, V, VII, X. Cleaves the collagen-like sequence Pro-Gln-Gly-Ile-Ala-Gly-Gln at the Gly-Ile bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gelatinase A activity (obsolete GO:0004228)","synonyms":[{"name":"3/4 collagenase activity","type":"related"},{"name":"72 kDa gelatinase type A","type":"related"},{"name":"72-kDa gelatinase activity","type":"narrow"},{"name":"MMP 2","type":"related"},{"name":"MMP-2","type":"exact"},{"name":"collagenase IV","type":"related"},{"name":"collagenase type IV","type":"related"},{"name":"gelatinase A activity","type":"exact"},{"name":"matrix metalloproteinase 2 activity","type":"related"},{"name":"matrix metalloproteinase 5","type":"related"},{"name":"type IV collagen metalloproteinase","type":"broad"},{"name":"type IV collagenase activity","type":"related"},{"name":"type IV collagenase/gelatinase activity","type":"related"}],"termid":"GO:0004228"}


id: PBO:0005207
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedreich's ataxia","termid":"PBO:0005207"}


id: GO:1903702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an esophagus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","ISBN:0-683-40008-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"esophagus development","synonyms":[{"name":"esophageal development","type":"exact"},{"name":"gullet development","type":"exact"},{"name":"oesophagus development","type":"exact"}],"termid":"GO:1903702"}


id: GO:1990732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle found within the chloroplasts of algae and hornworts; responsible for carbon dioxide fixation.","definition_xrefs":["GOC:pr","PMID:23345319","GOC:cjm","Wikipedia:Pyrenoid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pyrenoid","termid":"GO:1990732"}


id: PATO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased process quality","termid":"PATO:0002302"}


id: GO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amines across synaptic vesicle membranes.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle amine transmembrane transporter activity (obsolete GO:0005430)","termid":"GO:0005430"}


id: GO:0097469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. This reaction requires the binding of a regulatory cyclin subunit.","definition_xrefs":["GOC:al","GOC:vw","PMID:1372994"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein tyrosine kinase activity (obsolete GO:0097469)","synonyms":[{"name":"cyclin-dependent protein tyrosine kinase activity","type":"exact"}],"termid":"GO:0097469"}


id: GO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The main axonal trunk, as opposed to the collaterals; i.e., excluding collaterals, terminal, spines, or dendrites.","definition_xrefs":["NIF_Subcellular:sao1596975044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"main axon","synonyms":[{"name":"axon shaft","type":"related"},{"name":"axon trunk","type":"exact"},{"name":"axonal shaft","type":"related"}],"termid":"GO:0044304"}


id: GO:1902876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic pattern specification.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of embryonic pattern specification","termid":"GO:1902875"},{"relation_name":"negatively_regulates","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic pattern specification","synonyms":[{"name":"down regulation of embryonic pattern specification","type":"exact"},{"name":"down regulation of ventral/lateral system","type":"related"},{"name":"down-regulation of embryonic pattern specification","type":"exact"},{"name":"down-regulation of ventral/lateral system","type":"related"},{"name":"downregulation of embryonic pattern specification","type":"exact"},{"name":"downregulation of ventral/lateral system","type":"related"},{"name":"inhibition of embryonic pattern specification","type":"narrow"},{"name":"inhibition of ventral/lateral system","type":"related"},{"name":"negative regulation of ventral/lateral system","type":"related"}],"termid":"GO:1902876"}


id: GO:1990692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a trans-Golgi-derived vesicle to the lipid bilayer membrane around the medial-Golgi cisterna. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"retrograde transport, vesicle recycling within Golgi","termid":"GO:0000301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"trans-Golgi-derived vesicle fusion with Golgi medial cisterna membrane","synonyms":[{"name":"trans-Golgi-derived vesicle fusion with medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990692"}


id: PBO:0084492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein essential for chromosome synapsis; involved in completion of nuclear divisions during meiosis; induced early in meiosis","termid":"PBO:0084492"}


id: GO:0097492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of a sympathetic neuron axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron axon guidance","synonyms":[{"name":"sympathetic neuron axon chemotaxis","type":"related"},{"name":"sympathetic neuron axon growth cone guidance","type":"narrow"},{"name":"sympathetic neuron axon pathfinding","type":"exact"}],"termid":"GO:0097492"}


id: PR:Q09863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nst1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein nst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.10c","synonyms":[{"name":"Spom972h-nst1","type":"exact"}],"termid":"PR:Q09863"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: PBO:0029979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_nucleus","termid":"PBO:0029979"}


id: PBO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug174","termid":"PBO:0017064"}


id: GO:0051738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to xanthophylls, any of several neutral yellow to orange carotenoid pigments containing oxygen.","definition_xrefs":["ISBN:0122146743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"pigment binding","termid":"GO:0031409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"xanthophyll binding","termid":"GO:0051738"}


id: GO:0009826
data:
  {"annotated_genes":["SJAG_01017","SJAG_00244","SJAG_00514","SJAG_03581","SJAG_02392","SJAG_04509","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92027,86071,90754],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[90204,84125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[86927],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[111213],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell elongation","type":"narrow"},{"name":"cell growth along one axis","type":"exact"},{"name":"cell growth in one dimension","type":"exact"},{"name":"cell morphogenesis by unidimensional growth","type":"exact"},{"name":"polar cell growth","type":"exact"},{"name":"polarized cell growth","type":"exact"}],"termid":"GO:0009826","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0091827
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid Transfer at Contact site","termid":"PBO:0091827"}


id: GO:0047288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminyl derivative + CMP-N-acetyl-beta-neuraminate = N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminyl derivative + CMP + H+.","definition_xrefs":["EC:2.4.3.2","MetaCyc:2.4.99.2-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase","secondary_identifiers":["RHEA:18021"],"synonyms":[{"name":"monosialoganglioside sialyltransferase","type":"exact"}],"termid":"GO:0047288"}


id: PBO:0040798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member b9 pseudogene 1","termid":"PBO:0040798"}


id: GO:0099027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of presynaptic endocytic zone membrane (obsolete GO:0099027)","termid":"GO:0099027"}


id: PBO:0063100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator gamma","termid":"PBO:0063100"}


id: GO:0106312
data:
  {"annotated_genes":["SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94592],"is_not":false,"summary":null,"term":"GO:0106312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + NAD+ = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADH + H+.","definition_xrefs":["RHEA:19821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:0004489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-22438","EC:1.5.1.54"],"termid":"GO:0106312","terms_by_termid":{"GO:0106312":null}}


id: PBO:0032751
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"original gene was in a different frame","termid":"PBO:0032751"}


id: PBO:0082503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase zeta; involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev7p, Pol31p and Pol32p","termid":"PBO:0082503"}


id: PBO:0061876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1","termid":"PBO:0061876"}


id: PBO:0065192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 4","termid":"PBO:0065192"}


id: FYPO:0004808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein present as aggregates of misfolded protein is greater than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah","PMID:25543137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to heat","termid":"FYPO:0003152"},{"relation_name":"is_a","term_name":"increased cellular protein aggregate level","termid":"FYPO:0004180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular protein aggregate level during cellular response to heat","synonyms":[{"name":"increased cellular protein aggregate level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased cellular protein aggregate level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0004808"}


id: PBO:0054711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2120","termid":"PBO:0054711"}


id: GO:0047925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + geranoyl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:17701","EC:6.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"geranoyl-CoA carboxylase activity","secondary_identifiers":["MetaCyc:GERANOYL-COA-CARBOXYLASE-RXN","UM-BBD_reactionID:r1166","KEGG_REACTION:R03494"],"synonyms":[{"name":"geranoyl coenzyme A carboxylase activity","type":"related"},{"name":"geranoyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"geranyl-CoA carboxylase activity","type":"related"}],"termid":"GO:0047925"}


id: PBO:0074402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 1","termid":"PBO:0074402"}


id: PBO:0082364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autoregulatory, oleate-activated transcription factor; subunit of a heterodimeric complex with Oaf1p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; PIP2 has a paralog, OAF1, that arose from the whole genome duplication","termid":"PBO:0082364"}


id: FYPO:0007018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 2'-O-methylguanosine is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA guanosine 2'-O-methylation","synonyms":[{"name":"normal 2'-O-methylguanosine level in tRNA","type":"related"},{"name":"normal tRNA 2'-O-methylguanosine formation","type":"exact"},{"name":"normal tRNA Gm formation","type":"exact"},{"name":"normal tRNA guanosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA guanosine 2'-O-methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007018"}


id: PBO:0042526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 3","termid":"PBO:0042526"}


id: GO:0042585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The enlarged, fluid filled nucleus of a primary oocyte, the development of which is suspended in prophase I of the first meiotic division between embryohood and sexual maturity.","definition_xrefs":["GOC:mtg_sensu","GOC:jl","PMID:19019837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female germ cell nucleus","termid":"GO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"germinal vesicle","synonyms":[{"name":"primary oocyte nucleus","type":"exact"}],"termid":"GO:0042585"}


id: GO:0021858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic inhibitory neuron in the basal ganglia. Differentiation includes the processes involved in commitment of a neuroblast to a GABAergic neuron.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","PMID:16226447","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"GABAergic neuron differentiation in basal ganglia","termid":"GO:0021858"}


id: PBO:0068740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 3, pseudogene","termid":"PBO:0068740"}


id: PBO:0079404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 7 pseudogene","termid":"PBO:0079404"}


id: PBO:0060996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing E3 ubiquitin protein ligase 1","termid":"PBO:0060996"}


id: GO:0032591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendritic spine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"dendrite membrane","termid":"GO:0032590"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"dendritic spine membrane","termid":"GO:0032591"}


id: MOD:01320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:176#K","PubMed:16078144","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to lysine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01320"}


id: PBO:0088482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24","termid":"PBO:0088482"}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["UniProtKB:O13853","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: PBO:0058891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11181","termid":"PBO:0058891"}


id: GO:0047197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysterol + triacylglycerol = a 3-beta-hydroxysterol ester + 1,2-diacylglycerol.","definition_xrefs":["MetaCyc:2.3.1.77-RXN","EC:2.3.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"triglyceride-sterol O-acyltransferase activity","secondary_identifiers":["RHEA:16897"],"synonyms":[{"name":"triacylglycerol-sterol O-acyltransferase activity","type":"exact"},{"name":"triacylglycerol:3beta-hydroxysterol O-acyltransferase activity","type":"related"},{"name":"triacylglycerol:sterol acyltransferase activity","type":"related"}],"termid":"GO:0047197"}


id: GO:0006618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the signal peptide from a nascent protein during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal peptide processing","termid":"GO:0006465"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467","GO:0006605"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence processing","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence processing","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence processing","type":"exact"},{"name":"signal sequence processing during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006618"}


id: GO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"negatively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron differentiation","synonyms":[{"name":"down regulation of neuron differentiation","type":"exact"},{"name":"down-regulation of neuron differentiation","type":"exact"},{"name":"downregulation of neuron differentiation","type":"exact"},{"name":"inhibition of neuron differentiation","type":"narrow"}],"termid":"GO:0045665"}


id: PBO:0060265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYG1 antisense RNA 1","termid":"PBO:0060265"}


id: PBO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein (predicted)","termid":"PBO:0000334"}


id: PBO:0078478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 2-1","termid":"PBO:0078478"}


id: PBO:0067581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 738, pseudogene","termid":"PBO:0067581"}


id: GO:1903715
data:
  {"annotated_genes":["SJAG_01062","SJAG_02433","SJAG_02592","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90553,93801,105883,108064],"is_not":false,"summary":null,"term":"GO:1903715"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aerobic respiration.","definition_xrefs":["PMID:19266076","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"regulates","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_01062":null,"SJAG_02433":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of aerobic respiration","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903715","terms_by_termid":{"GO:1903715":null}}


id: GO:0051346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrolase activity","synonyms":[{"name":"down regulation of hydrolase activity","type":"exact"},{"name":"down-regulation of hydrolase activity","type":"exact"},{"name":"downregulation of hydrolase activity","type":"exact"},{"name":"hydrolase inhibitor","type":"exact"},{"name":"inhibition of hydrolase activity","type":"narrow"}],"termid":"GO:0051346"}


id: GO:1904845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamine stimulus.","definition_xrefs":["PMID:23185570","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-glutamine","termid":"GO:1904844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-glutamine","termid":"GO:1904845"}


id: PBO:0041031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2","termid":"PBO:0041031"}


id: FYPO:0001927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to ionizing radiation","synonyms":[{"name":"normal cell cycle delay following ionizing radiation","type":"exact"},{"name":"normal cell cycle regulation during cellular response to gamma radiation","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to ionizing radiation","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0001927"}


id: GO:1902426
data:
  {"annotated_genes":["SJAG_04259","SJAG_02336","SJAG_03126","SJAG_01297","SJAG_03681","SJAG_03353","SJAG_00883","SJAG_02169","SJAG_01679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86924,95750,100069,103408,104435,108140,109966,110441,112064],"is_not":false,"summary":null,"term":"GO:1902426"}]},"cv_name":"biological_process","definition":"A positive regulation of the mitotic metaphase/anaphase transition that results from deactivation of the mitotic spindle assembly checkpoint.","definition_xrefs":["GOC:dph","PMID:19592249","PMID:19075002","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic spindle assembly checkpoint signaling","termid":"GO:0140499"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0044772","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"deactivation of mitotic spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Mad2-dependent checkpoint","type":"related"},{"name":"down regulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"down regulation of mitotic spindle assembly checkpoint","type":"broad"},{"name":"down-regulation of Mad2-dependent checkpoint","type":"related"},{"name":"down-regulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"down-regulation of mitotic spindle assembly checkpoint","type":"broad"},{"name":"downregulation of Mad2-dependent checkpoint","type":"related"},{"name":"downregulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"downregulation of mitotic spindle assembly checkpoint","type":"broad"},{"name":"inhibition of Mad2-dependent checkpoint","type":"related"},{"name":"inhibition of mitotic cell cycle spindle assembly checkpoint","type":"related"},{"name":"inhibition of mitotic spindle assembly checkpoint","type":"related"},{"name":"mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"mitotic spindle assembly deactivation","type":"exact"},{"name":"negative regulation of Mad2-dependent checkpoint","type":"related"},{"name":"negative regulation of mitotic cell cycle spindle assembly checkpoint","type":"broad"},{"name":"negative regulation of mitotic spindle assembly checkpoint","type":"broad"}],"termid":"GO:1902426","terms_by_termid":{"GO:1902426":null}}


id: PBO:0058113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4328","termid":"PBO:0058113"}


id: PBO:0064909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R1 antisense RNA 1","termid":"PBO:0064909"}


id: PBO:0109455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1341, pseudogene","termid":"PBO:0109455"}


id: PATO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subterminal","termid":"PATO:0002475"}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: FYPO:0002383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 9 and 14 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PMID:23851719","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H3-K9 and H3-K14 acetylation at centromere outer repeat during vegetative growth (obsolete FYPO:0002383)","synonyms":[{"name":"increased histone H3 acetylation (K9 and K14) at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 and H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 and H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 and H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 and H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002383"}


id: PBO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia induced family protein","termid":"PBO:0002400"}


id: GO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host protein.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host molecular function (obsolete GO:0039507)","synonyms":[{"name":"down regulation by virus of host protein function","type":"exact"},{"name":"down-regulation by virus of host protein function","type":"exact"},{"name":"inhibition by virus of host protein function","type":"narrow"},{"name":"inhibition of host protein function","type":"narrow"},{"name":"negative regulation by virus of host molecular function","type":"exact"},{"name":"negative regulation by virus of host protein function","type":"exact"}],"termid":"GO:0039507"}


id: PBO:0089866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery CIA1/CFD1 fusion protein","termid":"PBO:0089866"}


id: GO:0000465
data:
  {"annotated_genes":["SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103629],"is_not":false,"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 5'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000465","terms_by_termid":{"GO:0000465":null}}


id: PBO:0108711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF Ste6","termid":"PBO:0108711"}


id: GO:0006662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycerol ether metabolic process","synonyms":[{"name":"glycerol ether metabolism","type":"exact"}],"termid":"GO:0006662"}


id: PBO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 5","termid":"PBO:0045583"}


id: GO:0061581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a corneal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneal epithelial cell migration","termid":"GO:0061581"}


id: PBO:0081446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 304","termid":"PBO:0081446"}


id: GO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated immunity","synonyms":[{"name":"activation of T cell mediated immunity","type":"narrow"},{"name":"positive regulation of T lymphocyte mediated immunity","type":"exact"},{"name":"positive regulation of T-cell mediated immunity","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated immunity","type":"exact"},{"name":"stimulation of T cell mediated immunity","type":"narrow"},{"name":"up regulation of T cell mediated immunity","type":"exact"},{"name":"up-regulation of T cell mediated immunity","type":"exact"},{"name":"upregulation of T cell mediated immunity","type":"exact"}],"termid":"GO:0002711"}


id: FYPO:0003659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which all or part of the mating-type region is duplicated or deleted upon mating type switching.","definition_xrefs":["PMID:8290356","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mating type switching resulting in duplication or deletion in mating-type region","synonyms":[{"name":"abnormal mating type switching resulting in duplication or deletion in mating-type region during mitotic cell cycle","type":"related"},{"name":"abnormal mating type switching resulting in duplication or deletion in mating-type region during vegetative growth","type":"exact"}],"termid":"FYPO:0003659"}


id: PBO:0065986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M pseudogene","termid":"PBO:0065986"}


id: PBO:0028379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_hypoxanthine_DNA_N-glycosylase_activity","termid":"PBO:0028379"}


id: PBO:0063462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor D","termid":"PBO:0063462"}


id: PBO:0058579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6516","termid":"PBO:0058579"}


id: PBO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L11 (predicted)","termid":"PBO:0000323"}


id: GO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"}


id: GO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor, adenylyl cyclase activating pathway","type":"exact"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenergic receptor, adenylate cyclase activating pathway","type":"exact"}],"termid":"GO:0071880"}


id: GO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the apex to base of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"basipetal auxin transport","termid":"GO:0010540"}


id: _global:assayed_enzyme
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a catalytic activity phenotype and an enzyme, usually a gene product, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_enzyme","termid":"_global:assayed_enzyme"}


id: PBO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; has specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle","termid":"PBO:0086088"}


id: PBO:0111759
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain","termid":"PBO:0111759"}


id: PBO:0073436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 5","termid":"PBO:0073436"}


id: PBO:0046495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERGIC and golgi 2","termid":"PBO:0046495"}


id: PBO:0040007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 15","termid":"PBO:0040007"}


id: PBO:0004731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiazole biosynthetic enzyme","termid":"PBO:0004731"}


id: GO:0075037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of appressorium maturation (obsolete GO:0075037)","synonyms":[{"name":"positive regulation maturation of appressorium on or near host","type":"exact"},{"name":"positive regulation of appressorium maturation on or near host","type":"related"}],"termid":"GO:0075037"}


id: PBO:0006183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_regulation_target","termid":"PBO:0006183"}


id: GO:0071599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the otic vesicle over time, from its formation to the mature structure. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"inner ear development","termid":"GO:0048839"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle development","termid":"GO:0071599"}


id: GO:2000939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose catabolic process","termid":"GO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose catabolic process","synonyms":[{"name":"regulation of plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000939"}


id: PBO:0054814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2227","termid":"PBO:0054814"}


id: PR:Q09897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfh1 gene.","definition_xrefs":["UniProtKB:Q09897","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.10c","synonyms":[{"name":"Chs four homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfh1","type":"exact"}],"termid":"PR:Q09897"}


id: PBO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA","termid":"PBO:0001874"}


id: GO:0007068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription during mitotic cell cycle (obsolete GO:0007068)","synonyms":[{"name":"down regulation of transcription during mitosis","type":"exact"},{"name":"down-regulation of transcription during mitosis","type":"exact"},{"name":"downregulation of transcription during mitosis","type":"exact"},{"name":"inhibition of transcription during mitosis","type":"narrow"},{"name":"mitotic repression of transcription","type":"exact"},{"name":"negative regulation of transcription, mitotic","type":"exact"}],"termid":"GO:0007068"}


id: PR:O14015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug108 gene.","definition_xrefs":["UniProtKB:O14015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 108 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.12c","synonyms":[{"name":"Spom972h-mug108","type":"exact"}],"termid":"PR:O14015"}


id: PBO:0029377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lipid_particles_present_in_decreased_numbers","termid":"PBO:0029377"}


id: PBO:0073619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 5","termid":"PBO:0073619"}


id: PBO:0058495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR5689 host gene","termid":"PBO:0058495"}


id: GO:0150091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and two or more dendritic spines protruding either from a single dendrite or from multiple dendrites.","definition_xrefs":["PMID:7482800","PMID:8366344","PMID:11248111","PMID:10586883","PMID:24487234","PMID:22028887","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple spine synapse organization","termid":"GO:0150089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization, multiple dendrites","termid":"GO:0150091"}


id: GO:0031565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mitotic cell cycle checkpoint that detects a defect in cytokinesis and negatively regulates G2/M transition.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis checkpoint (obsolete GO:0031565)","synonyms":[{"name":"contractile ring checkpoint","type":"exact"},{"name":"septin checkpoint","type":"exact"}],"termid":"GO:0031565"}


id: GO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + H+ + NADPH + O2 = 2-coumarate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.14","RHEA:10956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trans-cinnamate 2-monooxygenase activity","secondary_identifiers":["MetaCyc:TRANS-CINNAMATE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R02254"],"synonyms":[{"name":"cinnamate 2-hydroxylase activity","type":"related"},{"name":"cinnamate 2-monooxygenase activity","type":"related"},{"name":"cinnamic 2-hydroxylase activity","type":"related"},{"name":"cinnamic acid 2-hydroxylase activity","type":"related"},{"name":"trans-cinnamate,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"trans-cinnamic acid 2-hydroxylase activity","type":"exact"}],"termid":"GO:0050344"}


id: GO:0097753
data:
  {"annotated_genes":["SJAG_03795","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115366,115372],"is_not":false,"summary":null,"term":"GO:0097753"}]},"cv_name":"biological_process","definition":"A membrane organization process resulting in the bending of a membrane.","definition_xrefs":["GOC:vw","GOC:krc","GOC:pr","Wikipedia:Membrane_curvature"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_03795":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane bending","references_by_uniquename":{"PMID:33495454":null},"synonyms":[{"name":"membrane curvature","type":"related"}],"termid":"GO:0097753","terms_by_termid":{"GO:0097753":null}}


id: PBO:0069671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 948, pseudogene","termid":"PBO:0069671"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["PMID:21666597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: PBO:0063607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4 variant 1","termid":"PBO:0063607"}


id: PBO:0064750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 86","termid":"PBO:0064750"}


id: PBO:0052087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 3","termid":"PBO:0052087"}


id: GO:0036305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an ameloblast, a cylindrical epithelial cell in the innermost layer of the enamel organ.","definition_xrefs":["CL:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ameloblast differentiation","termid":"GO:0036305"}


id: GO:0033944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-galactofuranosides, releasing galactose.","definition_xrefs":["EC:3.2.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-galactofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.146-RXN"],"synonyms":[{"name":"beta-D-galactofuranosidase activity","type":"related"},{"name":"beta-D-galactofuranoside hydrolase activity","type":"related"},{"name":"exo-beta-D-galactofuranosidase activity","type":"related"},{"name":"exo-beta-galactofuranosidase activity","type":"related"}],"termid":"GO:0033944"}


id: MOD:00762
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"biantennary (-2 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Biantennary (-2 galactose)","type":"related"},{"name":"Hex(3)HexNAc(4)","type":"related"}],"termid":"MOD:00762"}


id: PBO:0077064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 1","termid":"PBO:0077064"}


id: PBO:0088498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein, peroxidase","termid":"PBO:0088498"}


id: PBO:0054138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1504","termid":"PBO:0054138"}


id: PBO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 9, pseudogene","termid":"PBO:0044796"}


id: GO:0022604
data:
  {"annotated_genes":["SJAG_00028","SJAG_00661","SJAG_00236","SJAG_03705","SJAG_00333","SJAG_02536","SJAG_00596","SJAG_02169","SJAG_04509","SJAG_02392","SJAG_02838","SJAG_03637","SJAG_03581","SJAG_04666","SJAG_00514","SJAG_00610","SJAG_04724","SJAG_03486","SJAG_00845","SJAG_01456","SJAG_01799","SJAG_02022","SJAG_04322","SJAG_04461","SJAG_00244","SJAG_04522","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86071,92027,90754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[99664,106946,114033,103025,84287,95898,112646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[100697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061246"},{"annotations":[86927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[112751,103793],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[99877,89925,96337,101523],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[111213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[115340,115339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[114908,100701,109235,91847,96340,90760,87329,101526],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[84134,88609,99020],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"synonyms":[{"name":"negative regulation of cell shape and cell size","type":"related"},{"name":"positive regulation of cell shape and cell size","type":"related"},{"name":"regulation of cell shape and cell size","type":"related"}],"termid":"GO:0022604","terms_by_termid":{"GO:0008360":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061246":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PATO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased affinity","termid":"PATO:0002072"}


id: GO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol ether biosynthetic process","synonyms":[{"name":"glycerol ether anabolism","type":"exact"},{"name":"glycerol ether biosynthesis","type":"exact"},{"name":"glycerol ether formation","type":"exact"},{"name":"glycerol ether synthesis","type":"exact"}],"termid":"GO:0046504"}


id: GO:0004818
data:
  {"annotated_genes":["SJAG_03071","SJAG_03277"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86532,97625],"is_not":false,"summary":null,"term":"GO:0004818"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu).","definition_xrefs":["EC:6.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03071":null,"SJAG_03277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"glutamate-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLURS-RXN","Reactome:R-HSA-379861","RHEA:23540","Reactome:R-HSA-380216"],"synonyms":[{"name":"L-glutamate:tRNAGlu ligase (AMP-forming) activity","type":"related"},{"name":"glutamate-tRNA synthetase activity","type":"related"},{"name":"glutamic acid translase activity","type":"related"},{"name":"glutamyl-tRNA synthetase activity","type":"exact"},{"name":"glutamyl-transfer RNA synthetase activity","type":"related"},{"name":"glutamyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glutamyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004818","terms_by_termid":{"GO:0004818":null}}


id: GO:0050063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + low-density lipoprotein L-serine = ADP + low-density lipoprotein O-phospho-L-serine.","definition_xrefs":["EC:2.7.11.29","MetaCyc:LOW-DENSITY-LIPOPROTEIN-KINASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density-lipoprotein particle receptor kinase activity (obsolete GO:0050063)","secondary_identifiers":["MetaCyc:2.7.11.29-RXN"],"synonyms":[{"name":"ATP:low-density-lipoprotein receptor-L-serine O-phosphotransferase activity","type":"related"},{"name":"ATP:low-density-lipoprotein-L-serine O-phosphotransferase activity","type":"related"},{"name":"LDL receptor kinase activity","type":"related"},{"name":"STK7","type":"related"},{"name":"[low-density lipoprotein receptor] kinase activity","type":"exact"},{"name":"low-density lipoprotein receptor kinase activity","type":"related"},{"name":"low-density-lipoprotein kinase activity","type":"broad"},{"name":"low-density-lipoprotein receptor kinase (phosphorylating) activity","type":"related"},{"name":"low-density-lipoprotein receptor kinase activity","type":"exact"}],"termid":"GO:0050063"}


id: SO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is acylated.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001721 H3K27_acylation_site (obsolete SO:0001721)","synonyms":[{"name":"H3K27 acylation site","type":"exact"},{"name":"H3K27Ac","type":"related"}],"termid":"SO:0001721"}


id: PBO:0049530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 1","termid":"PBO:0049530"}


id: PBO:0089064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase","termid":"PBO:0089064"}


id: GO:2000055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000055)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000055"}


id: GO:0015194
data:
  {"annotated_genes":["SJAG_04588","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86822,100022],"is_not":false,"summary":null,"term":"GO:0015194"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-serine from one side of a membrane to the other. L-serine is the L-enantiomer of 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai","GOC:mah","GOC:mtg_transport","RHEA:35031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-serine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015511","GO:1905361","Reactome:R-HSA-8932980"],"synonyms":[{"name":"L-serine permease activity","type":"related"},{"name":"L-serine transporter activity","type":"broad"},{"name":"serine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015194","terms_by_termid":{"GO:0015194":null}}


id: GO:0035155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a terminal cell fate in an open tracheal system. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"terminal cell fate specification, open tracheal system","termid":"GO:0035154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of terminal cell fate specification, open tracheal system","synonyms":[{"name":"down regulation of terminal cell fate specification","type":"exact"},{"name":"down-regulation of terminal cell fate specification","type":"exact"},{"name":"downregulation of terminal cell fate specification","type":"exact"},{"name":"inhibition of terminal cell fate specification","type":"narrow"},{"name":"negative regulation of terminal cell fate specification","type":"exact"}],"termid":"GO:0035155"}


id: PBO:0027777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_actomyosin_contractile_ring_contraction","termid":"PBO:0027777"}


id: GO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:bf","ISBN:0815340729","PMID:20920515","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated calcium channel activity in another organism","termid":"GO:0035918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of low voltage-gated calcium channel activity in another organism","synonyms":[{"name":"down-regulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of low voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of low voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035919"}


id: PBO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 52","termid":"PBO:0048341"}


id: GO:0140821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of UDP-beta-L-arabinofuranose from the cytosol to the Golgi apparatus of a cell.","definition_xrefs":["PMID:28373556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"UDP-beta-L-arabinofuranose import into Golgi lumen","synonyms":[{"name":"cytosol to Golgi apparatus UDP-beta-L-arabinofuranose transport","type":"exact"}],"termid":"GO:0140821"}


id: PBO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 6","termid":"PBO:0061516"}


id: GO:0000400
data:
  {"annotated_genes":["SJAG_02262","SJAG_02708","SJAG_04752","SJAG_02226","SJAG_02690","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88837,90914,91052,93105,96815,102243],"is_not":false,"summary":null,"term":"GO:0000400"},{"annotations":[90911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.","definition_xrefs":["PMID:15563464","GOC:krc","ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"four-way junction DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Holliday junction binding","type":"exact"},{"name":"forked DNA binding","type":"broad"}],"termid":"GO:0000400","terms_by_termid":{"GO:0000400":null,"GO:0000402":null}}


id: GO:1901845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:17130302","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication by electrical coupling","termid":"GO:0010651"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"},{"relation_name":"negatively_regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication by electrical coupling involved in cardiac conduction","synonyms":[{"name":"down regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"down-regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"downregulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"inhibition of cell communication by electrical coupling involved in cardiac conduction","type":"narrow"}],"termid":"GO:1901845"}


id: PATO:0001382
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing four homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Tetraploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraploid","termid":"PATO:0001382"}


id: FYPO:0000101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpropham. Cells stop growing (and may die) at a concentration of chlorpropham that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to chlorpropham","synonyms":[{"name":"hypersensitive to chlorpropham","type":"exact"},{"name":"sensitive to chlorpropham during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpropham during vegetative growth","type":"exact"},{"name":"sensitive to isopropyl N-3-chlorophenyl carbamate","type":"exact"},{"name":"sensitive to spindle poison","type":"broad"}],"termid":"FYPO:0000101"}


id: PBO:0090458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor small subunit, U2AF-59","termid":"PBO:0090458"}


id: PR:000027570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.1","termid":"PR:000027569"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"SPAC1834.04","type":"related"},{"name":"Spom-hht1","type":"exact"}],"termid":"PR:000027570"}


id: PBO:0042937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroadherin","termid":"PBO:0042937"}


id: PBO:0089416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S45","termid":"PBO:0089416"}


id: FYPO:0002426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable germinated spores, and in which some cells divide once and others do not divide. In the cells that divide once, an inviable cell forms from the growing end of the germ tube, but does not divide further.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including divided and undivided germinated spores (obsolete FYPO:0002426)","termid":"FYPO:0002426"}


id: PBO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 1","termid":"PBO:0043429"}


id: PATO:0002135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's delay to complete the closure of the opening of an anatomical entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed","termid":"PATO:0000502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed closure","termid":"PATO:0002135"}


id: FYPO:0009058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process in which depolymerization (i.e. removal of tubulin dimers) of microtubules as part of centromere clustering during meiotic prophase I is decreased with respect to normal. This can happen due to lower catastrophe rate or depolymerisation speed.","definition_xrefs":["PMID:36435910","PMID:23770679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased microtubule depolymerisation involved in meitotic centromere clustering during meiotic prophase I","termid":"FYPO:0009058"}


id: PBO:0045827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 17","termid":"PBO:0045827"}


id: PBO:0031400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation","termid":"PBO:0031400"}


id: FYPO:0007876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the plasma membrane is smoother than normal at the shmoo tip. Normally, the plasma membrane of one of a pair of mating cells is slack shmoo tip, forming waves instead of a smooth arc.","definition_xrefs":["PMID:34382996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased plasma membrane waviness at shmoo tip","synonyms":[{"name":"abnormally smooth plasma membrane at shmoo tip","type":"related"},{"name":"decreased plasma membrane waviness at mating projection tip","type":"exact"},{"name":"decreased plasma membrane waviness at shmoo projection","type":"exact"},{"name":"reduced plasma membrane waviness at shmoo tip","type":"exact"}],"termid":"FYPO:0007876"}


id: PBO:0085911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; member of the ovarian tumor-like (OTU) superfamily of predicted cysteine proteases; shows cytoplasmic localization; protein abundance increases in response to DNA replication stress","termid":"PBO:0085911"}


id: GO:0045730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst","secondary_identifiers":["Wikipedia:Respiratory_burst"],"synonyms":[{"name":"metabolic burst","type":"exact"},{"name":"oxidative burst","type":"exact"}],"termid":"GO:0045730"}


id: GO:0004705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: JUN + ATP = JUN phosphate + ADP. This reaction is the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase activity","termid":"GO:0004707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016740","GO:0016301","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"JUN kinase activity","secondary_identifiers":["Reactome:R-HSA-205075","Reactome:R-HSA-205132","Reactome:R-HSA-204949","Reactome:R-HSA-9673789","Reactome:R-HSA-168136"],"synonyms":[{"name":"JNK","type":"exact"},{"name":"JNK3alpha1","type":"related"},{"name":"SAPK1","type":"narrow"},{"name":"c-Jun N-terminal kinase activity","type":"narrow"}],"termid":"GO:0004705"}


id: FYPO:0005903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins, but stops before the ring completely constricts and is disassembled.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"incomplete actomyosin contractile ring contraction","synonyms":[{"name":"incomplete actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"incomplete actomyosin contractile ring contraction during vegetative growth","type":"exact"}],"termid":"FYPO:0005903"}


id: PBO:0041501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 75","termid":"PBO:0041501"}


id: FYPO:0000874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000874"}


