# terms

id: PR:P0CT77
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.07c","synonyms":[{"name":"Spom972h-rpl1101","type":"exact"}],"termid":"PR:P0CT77"}


id: GO:0048756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sieve cell. A sieve cell is a type of sieve element that has relatively undifferentiated sieve areas (with narrow pores). The sieve areas are rather uniform in structure on all walls; that is, there are no sieve plates. Typical of gymnosperms and lower vascular plants. The sieve element is the cell in the phloem tissue concerned with mainly longitudinal conduction of food materials.","definition_xrefs":["PO:0025415","POC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve element differentiation","termid":"GO:0090603"},{"relation_name":"part_of","term_name":"phloem development","termid":"GO:0010088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve cell differentiation","termid":"GO:0048756"}


id: GO:0044185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell late endosome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome membrane","termid":"GO:0044175"},{"relation_name":"part_of","term_name":"host cell late endosome","termid":"GO:0044184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome membrane","termid":"GO:0044185"}


id: GO:1903924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to estradiol.","definition_xrefs":["GO_REF:0000067","PMID:9048584","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"estradiol binding","termid":"GO:1903924"}


id: PR:Q9UUM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bridging integrator 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02771","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein hob3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.09c","secondary_identifiers":["UniProtKB:Q9UUM7"],"synonyms":[{"name":"Spom972h-BIN3","type":"exact"},{"name":"homolog of Bin3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUM7"}


id: PBO:0088724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly protein, LYR family Isd11","termid":"PBO:0088724"}


id: GO:0005660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of proteins that interacts with delta-DNA polymerase, promoting elongation. In humans it is a heteropentamer of subunits of 140/145, 40, 38, 37 and 36.5 kDa, which form a complex with the proliferating cell nuclear antigen (PCNA) in the presence of ATP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-DNA polymerase cofactor complex (obsolete GO:0005660)","synonyms":[{"name":"delta DNA polymerase cofactor complex","type":"exact"},{"name":"delta-DNA polymerase cofactor complex","type":"exact"}],"termid":"GO:0005660"}


id: PBO:0030031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenylyl_cyclase_activity","termid":"PBO:0030031"}


id: PBO:0040662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS7 divergent transcript","termid":"PBO:0040662"}


id: PBO:0004916
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-Glycoside Mannosyltransferase","termid":"PBO:0004916"}


id: GO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion.","definition_xrefs":["GO_REF:0000021","GOC:cjm","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}


id: PBO:0043237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel Ka","termid":"PBO:0043237"}


id: RO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x adjacent to y if and only if x and y share a boundary.","direct_ancestors":[{"relation_name":"is_a","term_name":"spatially_disjoint_from","termid":"RO:0002163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjacent_to","termid":"RO:0002220"}


id: PBO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing","termid":"PBO:0030536"}


id: MOD:00258
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form S-(2-aminovinyl)-3-methyl-D-cysteine.","definition_xrefs":["PubMed:9119018","RESID:AA0253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-3-methyl-D-cysteine","synonyms":[{"name":"(2S,3S)-2-amino-3-[((Z)-2-aminoethenyl)sulfanyl]butanoic acid","type":"exact"},{"name":"2-amino-3-[(2-aminovinyl)sulfanyl]butanoic acid","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-3-methyl-D-cysteine (Thr-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-3-methyl-D-cysteine","type":"exact"},{"name":"decarboxylated methyllanthionine","type":"exact"}],"termid":"MOD:00258"}


id: PBO:0088917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis","termid":"PBO:0088917"}


id: PBO:0039207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 1","termid":"PBO:0039207"}


id: PBO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 10","termid":"PBO:0061627"}


id: PBO:0000582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m5U54) methyltransferase Trm2 (predicted)","termid":"PBO:0000582"}


id: PBO:0077324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 62","termid":"PBO:0077324"}


id: PBO:0067414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 525, pseudogene","termid":"PBO:0067414"}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: SO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Posttranslationally formed amino acid bonds.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001087 cross_link (obsolete SO:0001087)","synonyms":[{"name":"cross link","type":"exact"},{"name":"crosslink","type":"related"}],"termid":"SO:0001087"}


id: GO:0051011
data:
  {"annotated_genes":["SJAG_02609","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70241,70817],"is_not":false,"summary":null,"term":"GO:0051011"}]},"cv_name":"molecular_function","definition":"Binding to the minus end of a microtubule.","definition_xrefs":["PMID:14557818","PMID:14614826","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02609":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008017","GO:0008092","GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"microtubule minus-end binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051011","terms_by_termid":{"GO:0051011":null}}


id: PATO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's formed or tending to form flakes or thin, crisp fragments.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flaky","termid":"PATO:0001805"}


id: GO:0021981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the developing subpallium in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell migration","termid":"GO:0021980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium radially oriented migration","termid":"GO:0021981"}


id: _global:increased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_magnitude_relative_to","termid":"_global:increased_in_magnitude_relative_to"}


id: GO:2001018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of retrograde axon cargo transport","termid":"GO:2001017"},{"relation_name":"negatively_regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of retrograde axon cargo transport","synonyms":[{"name":"negative regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001018"}


id: GO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"(1->6)-beta-D-glucan biosynthetic process","termid":"GO:0006078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of (1->6)-beta-D-glucan biosynthetic process","synonyms":[{"name":"regulation of 1,6-beta-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060917"}


id: PBO:0047032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 95 member C","termid":"PBO:0047032"}


id: PBO:0110503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable C (pseudogene)","termid":"PBO:0110503"}


id: GO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its symbiont's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by host of symbiont vascular system (obsolete GO:0052494)","termid":"GO:0052494"}


id: GO:0030930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four identical subunits that possesses ADPG pyrophosphorylase activity. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"homotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030930"}


id: GO:1905562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation.","definition_xrefs":["PMID:23201774","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"vascular endothelial cell proliferation","termid":"GO:0101023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial cell proliferation","termid":"GO:1905562"}


id: GO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thrombospondin and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thrombospondin receptor activity","termid":"GO:0070053"}


id: GO:0102701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = tricyclene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.105","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"tricyclene synthase activity","secondary_identifiers":["RHEA:32687","MetaCyc:RXN-5121"],"termid":"GO:0102701"}


id: PBO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase Dga1","termid":"PBO:0005050"}


id: PBO:0069818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1104, pseudogene","termid":"PBO:0069818"}


id: PR:Q9UR09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR09"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase PSU1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.13c","synonyms":[{"name":"Spom972h-psu1","type":"exact"},{"name":"cell wall synthesis protein psu1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR09"}


id: PR:000000001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA.","definition_xrefs":["PRO:DAN","PRO:WCB"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein","termid":"PR:000000001"}


id: PBO:0084978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in detoxification of furfural; expression is up-regulated in the presence of furfural and 5-hydroxymethylfurfural, which are compounds generated during lignocellulosic biomass pre-treatment; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0084978"}


id: PBO:0056051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like","termid":"PBO:0056051"}


id: PBO:0056556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 4","termid":"PBO:0056556"}


id: PBO:0075199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 11","termid":"PBO:0075199"}


id: GO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of the initiation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of initiation of T cell receptor signaling (obsolete GO:0023011)","synonyms":[{"name":"positive regulation of initiation of T cell receptor signaling","type":"exact"},{"name":"positive regulation of initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023011"}


id: PBO:0053622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 664","termid":"PBO:0053622"}


id: GO:0045093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to alpha subunit of interleukin-18. IL-18a is a component of IL-18 that is essential for IL-18 binding on the surface of T-helper 1 cells.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 alpha subunit binding (obsolete GO:0045093)","synonyms":[{"name":"IL-18Ra binding","type":"exact"}],"termid":"GO:0045093"}


id: PBO:0042197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin E1","termid":"PBO:0042197"}


id: RO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branching_part_of","termid":"RO:0002380"}


id: FYPO:0002082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased protein ubiquitination during vegetative growth","synonyms":[{"name":"increased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"increased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"increased protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002082"}


id: PBO:0045350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication fork stabilization factor DONSON","termid":"PBO:0045350"}


id: GO:0021517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord development","termid":"GO:0021517"}


id: GO:0099057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endocytic zone membrane (obsolete GO:0099057)","termid":"GO:0099057"}


id: GO:0061499
data:
  {"annotated_genes":["SJAG_02737","SJAG_01464","SJAG_01188","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103269,105031,111625,113096],"is_not":false,"summary":null,"term":"GO:0061499"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the outer plaque is in the cytoplasm.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer plaque of spindle pole body","termid":"GO:0005824"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_01215":null,"SJAG_01464":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0015630"],"is_obsolete":false,"name":"outer plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061499","terms_by_termid":{"GO:0061499":null}}


id: FYPO:0004237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PMID:20299449","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at centromere outer repeat","termid":"FYPO:0006682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"increased protein localisation to heterochromatin at centromere otr","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"increased protein localisation to heterochromatin at pericentric region","type":"related"},{"name":"increased protein localisation to heterochromatin at pericentromeric region","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004237"}


id: GO:0071366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indolebutyric acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to auxin stimulus","termid":"GO:0071365"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to indolebutyric acid","termid":"GO:0080026"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to indolebutyric acid stimulus","synonyms":[{"name":"cellular response to IBA stimulus","type":"exact"},{"name":"cellular response to indole-3-butyric acid stimulus","type":"narrow"}],"termid":"GO:0071366"}


id: GO:0140108
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110352],"is_not":false,"summary":null,"term":"GO:0140108"}]},"cv_name":"molecular_function","definition":"Enables the transfer of glucose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:25411338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140108","terms_by_termid":{"GO:0140108":null}}


id: GO:0019492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces the amino acid proline from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline biosynthetic process","termid":"GO:0006561"},{"relation_name":"is_a","term_name":"amino acid salvage","termid":"GO:0043102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"proline salvage","synonyms":[{"name":"proline cycling","type":"exact"}],"termid":"GO:0019492"}


id: GO:1902151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to DNA integrity checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cell cycle checkpoint signaling","termid":"GO:1902145"},{"relation_name":"regulates","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to DNA integrity checkpoint signaling","synonyms":[{"name":"regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:1902151"}


id: PBO:0055613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3052","termid":"PBO:0055613"}


id: GO:1900936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of nonadec-1-ene metabolic process","termid":"GO:1900933"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of nonadec-1-ene formation","type":"exact"},{"name":"down regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene formation","type":"exact"},{"name":"down-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of nonadec-1-ene formation","type":"exact"},{"name":"downregulation of nonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene formation","type":"exact"},{"name":"inhibition of nonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene formation","type":"exact"},{"name":"negative regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900936"}


id: PBO:0067001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 5, pseudogene","termid":"PBO:0067001"}


id: GO:0008645
data:
  {"annotated_genes":["SJAG_03608","SJAG_03820","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99158],"is_not":false,"summary":null,"term":"GO:0008645"},{"annotations":[106835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[106836,110348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[113353,110349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The process in which hexose is transported across a membrane. Hexoses are aldoses with a chain of six carbon atoms in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"hexose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008647","GO:0035428","GO:0008646"],"synonyms":[{"name":"hexose membrane transport","type":"related"},{"name":"hexose transport","type":"related"},{"name":"high-affinity hexose transport","type":"narrow"},{"name":"low-affinity hexose transport","type":"narrow"}],"termid":"GO:0008645","terms_by_termid":{"GO:0008645":null,"GO:0046323":null,"GO:0098708":null,"GO:0140425":null}}


id: PBO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Vps3 (predicted)","termid":"PBO:0005152"}


id: PBO:0062697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 1 pseudogene","termid":"PBO:0062697"}


id: PBO:0065261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23 domain containing 2","termid":"PBO:0065261"}


id: PR:O43021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC354.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C354.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.07c","synonyms":[{"name":"Spom972h-SPBC354.07c","type":"exact"}],"termid":"PR:O43021"}


id: PATO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mobility","termid":"PATO:0002282"}


id: PR:O60131
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.17 gene.","definition_xrefs":["UniProtKB:O60131","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C16G5.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.17","synonyms":[{"name":"Spom972h-SPBC16G5.17","type":"exact"}],"termid":"PR:O60131"}


id: GO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or stops progression through the host cell cycle.","definition_xrefs":["PMID:10946289","PMID:19308257"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host cell cycle progression (obsolete GO:0044072)","synonyms":[{"name":"cell cycle arrest in host","type":"related"},{"name":"negative regulation by symbiont of host cell cycle","type":"related"},{"name":"suppression of host cell cycle progression","type":"exact"}],"termid":"GO:0044072"}


id: PR:000027713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase class I, small subunit that is a translation product of the Schizosaccharomyces pombe 972h- suc22 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:12867051","PMID:20516199","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain","synonyms":[{"name":"Ribonucleotide reductase small subunit","type":"broad"},{"name":"suc22","type":"exact"}],"termid":"PR:000027713"}


id: GO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceeding septation.","definition_xrefs":["GOC:dph","PMID:12094232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"},{"relation_name":"part_of","term_name":"determination of heart left/right asymmetry","termid":"GO:0061371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart looping","synonyms":[{"name":"cardiac looping","type":"exact"}],"termid":"GO:0001947"}


id: PBO:0005092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute","termid":"PBO:0005092"}


id: PBO:0063091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 9","termid":"PBO:0063091"}


id: GO:1905939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gonad development.","definition_xrefs":["GO_REF:0000058","PMID:15342467","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gonad development","synonyms":[{"name":"regulation of gonadogenesis","type":"exact"}],"termid":"GO:1905939"}


id: GO:0005997
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xylulose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xylulose metabolism","type":"exact"}],"termid":"GO:0005997","terms_by_termid":{"GO:0005998":null}}


id: PBO:0035914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_mitotic_G1_phase","termid":"PBO:0035914"}


id: PBO:0050226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 4","termid":"PBO:0050226"}


id: GO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone biosynthetic process","synonyms":[{"name":"hormone anabolism","type":"exact"},{"name":"hormone biosynthesis","type":"exact"},{"name":"hormone formation","type":"exact"},{"name":"hormone synthesis","type":"exact"}],"termid":"GO:0042446"}


id: PBO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 2","termid":"PBO:0043090"}


id: PBO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 1","termid":"PBO:0043542"}


id: PBO:0030144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_L-thialysine","termid":"PBO:0030144"}


id: GO:0033418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"CUC codon-amino acid adaptor activity","synonyms":[{"name":"CTC codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033418"}


id: GO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of testicular cells, an organelle derived from the spectrosome.","definition_xrefs":["ISBN:0879694238","GOC:mah","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"testicular fusome organization","synonyms":[{"name":"testicular fusome organisation","type":"exact"},{"name":"testicular fusome organization and biogenesis","type":"related"}],"termid":"GO:0030724"}


id: GO:0005936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The characteristic projection formed in response to mating pheromone by cells of Saccharomyces and other fungi with similar life cycles. Named after the Al Capp cartoon character, whose shape it resembles.","definition_xrefs":["GOC:mcc","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete shmoo (obsolete GO:0005936)","synonyms":[{"name":"shmoo","type":"exact"}],"termid":"GO:0005936"}


id: GO:0007392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Events that occur at the start of dorsal closure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of dorsal closure","termid":"GO:0007392"}


id: PATO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000675 body temperature value (obsolete PATO:0000675)","termid":"PATO:0000675"}


id: PBO:0012012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing protein, human NSRP1 ortholog","termid":"PBO:0012012"}


id: CHEBI:28938
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium","termid":"CHEBI:28938"}


id: PBO:0083135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; regulates growth, sporulation, and glycogen accumulation in a cAMP-dependent protein kinase cascade dependent manner; mutants are defective in 60S ribosome assembly; positively regulates pre-autophagosomal structure (PAS) formation upon nitrogen starvation or rapamycin treatment","termid":"PBO:0083135"}


id: PBO:0046917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member A","termid":"PBO:0046917"}


id: PR:Q09720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF6","PRO:DNx","OMA:SCHPO00153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.04c","secondary_identifiers":["UniProtKB:Q09720"],"synonyms":[{"name":"Spom972h-PSMB2","type":"exact"}],"termid":"PR:Q09720"}


id: PBO:0028500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amitrole","termid":"PBO:0028500"}


id: GO:0007278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a pole cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"pole cell development","termid":"GO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pole cell fate determination","termid":"GO:0007278"}


id: GO:0050942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"positively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pigment cell differentiation","synonyms":[{"name":"activation of pigment cell differentiation","type":"narrow"},{"name":"stimulation of pigment cell differentiation","type":"narrow"},{"name":"up regulation of pigment cell differentiation","type":"exact"},{"name":"up-regulation of pigment cell differentiation","type":"exact"},{"name":"upregulation of pigment cell differentiation","type":"exact"}],"termid":"GO:0050942"}


id: PBO:0091836
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe homologue of the SUN family","termid":"PBO:0091836"}


id: PATO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000023 relative compatability (obsolete PATO:0000023)","termid":"PATO:0000023"}


id: PBO:0076312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2 binding protein","termid":"PBO:0076312"}


id: GO:0098767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis II.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis II M phase (obsolete GO:0098767)","termid":"GO:0098767"}


id: GO:0031414
data:
  {"annotated_genes":["SJAG_03045","SJAG_04631","SJAG_04131","SJAG_02920","SJAG_03215","SJAG_02726","SJAG_01826","SJAG_06449","SJAG_04179"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114116,106603,112954,85605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[98733,111503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[108970,99754,101653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"}]},"cv_name":"cellular_component","definition":"A complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_02726":null,"SJAG_02920":null,"SJAG_03045":null,"SJAG_03215":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04631":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"N-terminal protein acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAT complex","type":"exact"}],"termid":"GO:0031414","terms_by_termid":{"GO:0031415":null,"GO:0031416":null,"GO:0031417":null}}


id: PBO:0024862
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor AP lyase activity detected but is not likely to be biologically relevant","termid":"PBO:0024862"}


id: GO:1904979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosome organization.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:pad","PMID:22511594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of endosome organization","termid":"GO:1904978"},{"relation_name":"negatively_regulates","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosome organization","synonyms":[{"name":"down regulation of endosome organisation","type":"exact"},{"name":"down regulation of endosome organization","type":"exact"},{"name":"down regulation of endosome organization and biogenesis","type":"related"},{"name":"down-regulation of endosome organisation","type":"exact"},{"name":"down-regulation of endosome organization","type":"exact"},{"name":"down-regulation of endosome organization and biogenesis","type":"related"},{"name":"downregulation of endosome organisation","type":"exact"},{"name":"downregulation of endosome organization","type":"exact"},{"name":"downregulation of endosome organization and biogenesis","type":"related"},{"name":"inhibition of endosome organisation","type":"narrow"},{"name":"inhibition of endosome organization","type":"narrow"},{"name":"inhibition of endosome organization and biogenesis","type":"related"},{"name":"negative regulation of endosome organisation","type":"exact"},{"name":"negative regulation of endosome organization and biogenesis","type":"related"}],"termid":"GO:1904979"}


id: PBO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 3","termid":"PBO:0005009"}


id: GO:1902722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prolactin secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16159377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"prolactin secretion","termid":"GO:0070459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of prolactin secretion","synonyms":[{"name":"activation of prolactin secretion","type":"narrow"},{"name":"up regulation of prolactin secretion","type":"exact"},{"name":"up-regulation of prolactin secretion","type":"exact"},{"name":"upregulation of prolactin secretion","type":"exact"}],"termid":"GO:1902722"}


id: GO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of rapid eye movement (REM) sleep.","definition_xrefs":["GOC:jl","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, REM sleep","termid":"GO:0042320"},{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, REM sleep","type":"narrow"},{"name":"negative regulation of REM sleep","type":"exact"}],"termid":"GO:0042322"}


id: PBO:0065605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 pseudogene 1","termid":"PBO:0065605"}


id: PBO:0059628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 2","termid":"PBO:0059628"}


id: PBO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 130","termid":"PBO:0075080"}


id: GO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to neutral pH","termid":"GO:0036176"}


id: GO:0010123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic chemical reactions and pathways resulting in the breakdown of acetate to form butyrate, ethanol, acetone and butanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate catabolic process to butyrate, ethanol, acetone and butanol (obsolete GO:0010123)","secondary_identifiers":["MetaCyc:CENTFERM-PWY"],"synonyms":[{"name":"acetate fermentation to butyrate, ethanol, acetone and butanol","type":"exact"}],"termid":"GO:0010123"}


id: GO:1902474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:TermGenie","PMID:22588719","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to synapse","synonyms":[{"name":"activation of protein localisation to synapse","type":"narrow"},{"name":"activation of protein localization to synapse","type":"narrow"},{"name":"positive regulation of protein localisation to synapse","type":"exact"},{"name":"up regulation of protein localisation to synapse","type":"exact"},{"name":"up regulation of protein localization to synapse","type":"exact"},{"name":"up-regulation of protein localisation to synapse","type":"exact"},{"name":"up-regulation of protein localization to synapse","type":"exact"},{"name":"upregulation of protein localisation to synapse","type":"exact"},{"name":"upregulation of protein localization to synapse","type":"exact"}],"termid":"GO:1902474"}


id: PBO:0057675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1266","termid":"PBO:0057675"}


id: PR:G2TRP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.15","synonyms":[{"name":"Spom972h-SPBC21B10.15","type":"exact"}],"termid":"PR:G2TRP4"}


id: GO:0033609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxalate, the organic acid ethanedioate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxalate metabolic process","synonyms":[{"name":"ethanedioate metabolic process","type":"exact"},{"name":"ethanedioic acid metabolic process","type":"exact"},{"name":"oxalate metabolism","type":"exact"},{"name":"oxalic acid metabolic process","type":"exact"}],"termid":"GO:0033609"}


id: PATO:0001485
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being thicker or more closely packed together; pressed tightly together.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensed","secondary_identifiers":["PATO:0001840"],"synonyms":[{"name":"compact","type":"broad"},{"name":"compressed","type":"exact"},{"name":"dense","type":"related"},{"name":"squashed","type":"exact"}],"termid":"PATO:0001485"}


id: PBO:0030621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maltase_activity","termid":"PBO:0030621"}


id: PBO:0068046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 351","termid":"PBO:0068046"}


id: GO:1904600
data:
  {"annotated_genes":["SJAG_02864","SJAG_01894","SJAG_02700","SJAG_01993","SJAG_02989","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84489,88695,94467,95067,95146,110494],"is_not":false,"summary":null,"term":"GO:1904600"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an actin fusion focus.","definition_xrefs":["PMID:25825517","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"part_of","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0000747","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"mating projection actin fusion focus assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin fusion focus assembly","type":"broad"},{"name":"actin fusion focus formation","type":"exact"}],"termid":"GO:1904600","terms_by_termid":{"GO:1904600":null}}


id: PBO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein involved in inositol lipid-mediated signaling Sfk1","termid":"PBO:0090580"}


id: PBO:0082546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on mutant phenotype and its regulation by Ste12p; SWC10 has a paralog, SCW4, that arose from the whole genome duplication","termid":"PBO:0082546"}


id: GO:0018452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-exo-hydroxycamphor + NAD+ = NADH + H+ + 2,5-diketocamphane.","definition_xrefs":["UM-BBD_reactionID:r0427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"5-exo-hydroxycamphor dehydrogenase activity","secondary_identifiers":["MetaCyc:R542-RXN","RHEA:32879","EC:1.1.1.327"],"termid":"GO:0018452"}


id: GO:0042939
data:
  {"annotated_genes":["SJAG_01660","SJAG_03577","SJAG_01344","SJAG_03497","SJAG_05213","SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59122],"is_not":false,"summary":null,"term":"GO:0042939"},{"annotations":[91707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[114323,93233,92251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[99188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide, a compound containing three amino acids linked together by peptide bonds, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tripeptide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0042939","terms_by_termid":{"GO:0034775":null,"GO:0042939":null,"GO:0071996":null,"GO:0098709":null,"GO:0140207":null,"GO:0160007":null}}


id: PBO:0029782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_during_vegetative_growth","termid":"PBO:0029782"}


id: PBO:0043932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor required for Sp1 transcriptional activation subunit 5","termid":"PBO:0043932"}


id: PBO:0088388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC), ubiquitin conjugating enzyme E2 subunit Rhp6/Rad6","termid":"PBO:0088388"}


id: GO:0140795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 2)= histone H3 L-citrullyl (position 2) + NH4+, resulting in histone H3 citrullination at position 2.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"histone H3R2 arginine deiminase activity","synonyms":[{"name":"H3-R2 citrullination","type":"exact"},{"name":"histone H3-R2 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R2 specific)","type":"exact"}],"termid":"GO:0140795"}


id: PBO:0056658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 25","termid":"PBO:0056658"}


id: PBO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation regulator Ppr4","termid":"PBO:0002162"}


id: GO:0098929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of spine apparatus membrane (obsolete GO:0098929)","termid":"GO:0098929"}


id: GO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation involved in immune response","synonyms":[{"name":"macrophage activation during immune response","type":"related"},{"name":"macrophage polarization involved in immune response","type":"exact"}],"termid":"GO:0002281"}


id: PBO:0005254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inhibitor protein kinase Wee1","termid":"PBO:0005254"}


id: PBO:0088392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rsv2","termid":"PBO:0088392"}


id: GO:0061172
data:
  {"annotated_genes":["SJAG_00317","SJAG_01373","SJAG_04522","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[103792,108657,99876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061172","terms_by_termid":{"GO:0061173":null,"GO:1904846":null}}


id: PBO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 24","termid":"PBO:0070489"}


id: PBO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein zeta","termid":"PBO:0042685"}


id: FYPO:0000658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"decreased DNA binding","synonyms":[{"name":"reduced DNA binding","type":"exact"}],"termid":"FYPO:0000658"}


id: GO:0018522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ADP + cyclohexa-1,5-diene-1-carbonyl-CoA + oxidized ferredoxin + 2 phosphate = 2 ATP + 2 H2O + benzoyl-CoA + reduced ferredoxin.","definition_xrefs":["EC:1.3.7.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzoyl-CoA reductase activity","secondary_identifiers":["RHEA:30199","KEGG_REACTION:R02451","MetaCyc:1.3.99.15-RXN","UM-BBD_reactionID:r0190"],"synonyms":[{"name":"benzoyl-CoA reductase (dearomatizing) activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA:ferredoxin oxidoreductase (aromatizing, ATP-forming) activity","type":"exact"}],"termid":"GO:0018522"}


id: PBO:0078386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-1","termid":"PBO:0078386"}


id: PBO:0004856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13a","termid":"PBO:0004856"}


id: GO:1903122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:21785459","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902042"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"negatively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"down regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"down regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"down regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"downregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"downregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"downregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"inhibition of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"negative regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903122"}


id: GO:0060695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of cholesterol transporter activity.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transporter activity","termid":"GO:0060694"},{"relation_name":"is_a","term_name":"negative regulation of lipid transporter activity","termid":"GO:0110114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholesterol transporter activity","termid":"GO:0060695"}


id: PBO:0068680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 61, pseudogene","termid":"PBO:0068680"}


id: PATO:0025001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potability","termid":"PATO:0025000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-potable","synonyms":[{"name":"undrinkable","type":"exact"}],"termid":"PATO:0025001"}


id: PBO:0079844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog C","termid":"PBO:0079844"}


id: PBO:0000893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (predicted)","termid":"PBO:0000893"}


id: GO:0102080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + glycine = H+ + phenylacetylglycine + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"phenylacetyl-coenzyme A:glycine N-acyltransferase activity","secondary_identifiers":["RHEA:27850","MetaCyc:RXN-10821"],"termid":"GO:0102080"}


id: PBO:0091108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein, human TOLLIP ortholog","termid":"PBO:0091108"}


id: PATO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamentous","termid":"PATO:0001360"}


id: PBO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8 (predicted)","termid":"PBO:0003564"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: GO:1903236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:18308860","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"}


id: PBO:0082563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone for Replication Protein A complex (RPA); involved in nuclear import of RPA and its binding to ssDNA at replication forks; has a role in regulation of Ty1 transposition","termid":"PBO:0082563"}


id: FYPO:0005330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-free translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-free translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005330"}


id: PBO:0030600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_vacuole","termid":"PBO:0030600"}


id: GO:0033453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"GCU codon-amino acid adaptor activity","synonyms":[{"name":"GCT codon-amino acid adaptor activity","type":"exact"},{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033453"}


id: MOD:00112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-12-hydroxyfarnesyl-L-cysteine.","definition_xrefs":["RESID:AA0103","PubMed:17790543","Unimod:376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated cysteine","termid":"MOD:01110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-12-hydroxyfarnesyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E,6E,10Z)-12-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]sulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(12-hydroxy-3,7,11-trimethyl-3,6,10-dodecatrienylthio)propanoic acid","type":"exact"},{"name":"Hydroxyfarnesyl","type":"related"},{"name":"LIPID S-12-hydroxyfarnesyl cysteine","type":"exact"},{"name":"S-12-hydroxyfarnesyl-L-cysteine","type":"exact"},{"name":"S12HyFarnCys","type":"exact"},{"name":"hydroxyfarnesyl","type":"related"}],"termid":"MOD:00112"}


id: GO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.","definition_xrefs":["PMID:26618722","GOC:bc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial membrane scission site","termid":"GO:0090692"}


id: PBO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-thialysine","termid":"PBO:0030142"}


id: GO:0004203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-4 activity (obsolete GO:0004203)","synonyms":[{"name":"caspase-4 activity","type":"exact"}],"termid":"GO:0004203"}


id: PBO:0064865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R21 divergent transcript","termid":"PBO:0064865"}


id: PBO:0081567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 492","termid":"PBO:0081567"}


id: GO:0004104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion.","definition_xrefs":["EC:3.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"cholinesterase activity","secondary_identifiers":["RHEA:21964","MetaCyc:CHOLINESTERASE-RXN"],"synonyms":[{"name":"BtChoEase activity","type":"related"},{"name":"acylcholine acylhydrolase activity","type":"related"},{"name":"anticholineesterase activity","type":"related"},{"name":"benzoylcholinesterase activity","type":"related"},{"name":"butyrylcholine esterase activity","type":"related"},{"name":"butyrylcholinesterase activity","type":"related"},{"name":"choline esterase II (unspecific) activity","type":"related"},{"name":"choline esterase activity","type":"related"},{"name":"non-specific cholinesterase activity","type":"related"},{"name":"propionylcholinesterase activity","type":"related"},{"name":"pseudocholinesterase activity","type":"related"}],"termid":"GO:0004104"}


id: GO:0035677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a posterior lateral line neuromast hair cell over time, from its formation to the mature structure. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell development","termid":"GO:0035675"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell differentiation","termid":"GO:0048923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}


id: PR:O94706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23307:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.06","secondary_identifiers":["UniProtKB:O94706"],"synonyms":[{"name":"SPCC1259.06","type":"related"},{"name":"Spom972h-TAF8","type":"exact"},{"name":"TBP-associated factor 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94706"}


id: PBO:0073676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein gamma","termid":"PBO:0073676"}


id: PBO:0089582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK family cell polarity protein kinase Pom1","termid":"PBO:0089582"}


id: PBO:0042487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12","termid":"PBO:0042487"}


id: GO:1903842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite ion stimulus.","definition_xrefs":["GOC:mr","PMID:12106899","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenite ion","termid":"GO:1903842"}


id: GO:0160128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic ion by a channel that opens in response to a change in proton concentration (pH).","definition_xrefs":["PMID:29513651","PMID:17167423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pH-gated monoatomic ion channel activity","secondary_identifiers":["Reactome:R-HSA-2671885","Wikipedia:Acid-sensing_ion_channel"],"synonyms":[{"name":"acid-sensing ion channel activity","type":"related"},{"name":"proton-gated ion channel activity","type":"exact"}],"termid":"GO:0160128"}


id: FYPO:0007788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of macroautophagy is increased.","definition_xrefs":["PMID:17121544","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased macroautophagy","termid":"FYPO:0000384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased macroautophagy during vegetative growth","synonyms":[{"name":"increased macroautophagy during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007788"}


id: PBO:0084958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb-related transcription factor; involved in regulating basal and induced expression of genes of the purine and histidine biosynthesis pathways; also involved in regulation of meiotic recombination at specific genes","termid":"PBO:0084958"}


id: GO:0047623
data:
  {"annotated_genes":["SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an adenosine-phosphate + H20 = an inosine phosphate + NH3. Catalyzes the deamination of AMP, ADP or ATP.","definition_xrefs":["EC:3.5.4.17","GOC:bf","MetaCyc:ADENOSINE-PHOSPHATE-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"adenosine-phosphate deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine nucleotide deaminase activity","type":"related"},{"name":"adenosine (phosphate) deaminase activity","type":"related"},{"name":"adenosine-phosphate aminohydrolase activity","type":"related"}],"termid":"GO:0047623","terms_by_termid":{"GO:0003876":null}}


id: PR:G2TRQ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L36, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.18","synonyms":[{"name":"Spom972h-tam9","type":"exact"},{"name":"transcripts altered in meiosis protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ8"}


id: PBO:0088476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex zf-CCCH type zinc finger subunit Red5","termid":"PBO:0088476"}


id: PBO:0062688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 9 pseudogene","termid":"PBO:0062688"}


id: GO:1905927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["GO_REF:0000058","PMID:15684033","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invadopodium disassembly (obsolete GO:1905927)","termid":"GO:1905927"}


id: PBO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc7/UbcP3","termid":"PBO:0003811"}


id: PBO:0109375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8","termid":"PBO:0109375"}


id: PBO:0085094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor for the ribosomal pre-60S subunit; shuttling factor which directly binds FG rich nucleoporins and facilities translocation through the nuclear pore complex; interacts directly with Alb1p; responsible for Tif6p recycling defects in the absence of Rei1; associated with the ribosomal export complex","termid":"PBO:0085094"}


id: GO:0072071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the interstitial fibroblast of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney interstitial fibroblast differentiation","synonyms":[{"name":"kidney interstitial cell differentiation","type":"exact"}],"termid":"GO:0072071"}


id: PBO:0049353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 11","termid":"PBO:0049353"}


id: PBO:0062114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 13","termid":"PBO:0062114"}


id: GO:0072725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 4-nitroquinoline N-oxide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to 4-nitroquinoline N-oxide","termid":"GO:0072724"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 4-nitroquinoline N-oxide","termid":"GO:0072725"}


id: PBO:0069250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 505, pseudogene","termid":"PBO:0069250"}


id: GO:1904984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of quinolinate biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:19843166","GO_REF:0000058","GOC:bf","GOC:PARL","PMID:12140278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"quinolinate biosynthetic process","termid":"GO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of quinolinate biosynthetic process","synonyms":[{"name":"regulation of quinolinate anabolism","type":"exact"},{"name":"regulation of quinolinate biosynthesis","type":"exact"},{"name":"regulation of quinolinate formation","type":"exact"},{"name":"regulation of quinolinate synthesis","type":"exact"}],"termid":"GO:1904984"}


id: PBO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 72","termid":"PBO:0048361"}


id: PATO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000517 abiotic stress sensitivity value (obsolete PATO:0000517)","termid":"PATO:0000517"}


id: GO:1902373
data:
  {"annotated_genes":["SJAG_02573","SJAG_03883","SJAG_03448","SJAG_03283","SJAG_04946","SJAG_00797","SJAG_03696","SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85296,85693],"is_not":false,"summary":null,"term":"GO:1902373"},{"annotations":[77586,114433,86402,96253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[85692,92426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:22626865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA breakdown","type":"exact"},{"name":"down regulation of mRNA catabolic process","type":"exact"},{"name":"down regulation of mRNA catabolism","type":"exact"},{"name":"down regulation of mRNA decay","type":"related"},{"name":"down regulation of mRNA degradation","type":"exact"},{"name":"down-regulation of mRNA breakdown","type":"exact"},{"name":"down-regulation of mRNA catabolic process","type":"exact"},{"name":"down-regulation of mRNA catabolism","type":"exact"},{"name":"down-regulation of mRNA decay","type":"related"},{"name":"down-regulation of mRNA degradation","type":"exact"},{"name":"downregulation of mRNA breakdown","type":"exact"},{"name":"downregulation of mRNA catabolic process","type":"exact"},{"name":"downregulation of mRNA catabolism","type":"exact"},{"name":"downregulation of mRNA decay","type":"related"},{"name":"downregulation of mRNA degradation","type":"exact"},{"name":"inhibition of mRNA breakdown","type":"narrow"},{"name":"inhibition of mRNA catabolic process","type":"narrow"},{"name":"inhibition of mRNA catabolism","type":"narrow"},{"name":"inhibition of mRNA decay","type":"related"},{"name":"inhibition of mRNA degradation","type":"narrow"},{"name":"negative regulation of mRNA breakdown","type":"exact"},{"name":"negative regulation of mRNA catabolism","type":"exact"},{"name":"negative regulation of mRNA decay","type":"related"},{"name":"negative regulation of mRNA degradation","type":"exact"}],"termid":"GO:1902373","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0120271":null,"GO:1902373":null}}


id: GO:0006874
data:
  {"annotated_genes":["SJAG_02019","SJAG_04757","SJAG_03793","SJAG_04167","SJAG_02532","SJAG_04892","SJAG_03631","SJAG_03879","SJAG_04698","SJAG_04028","SJAG_01400","SJAG_01435","SJAG_03866","SJAG_03850","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91637,91868,92984,94290,94504,97179,97798,104848,108525,109545,110108,111250,111719,114699],"is_not":false,"summary":null,"term":"GO:0006874"},{"annotations":[86901,87385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of calcium ions within a cell.","definition_xrefs":["GOC:mah","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"calcium ion homeostasis","termid":"GO:0055074"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01400":null,"SJAG_01435":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04167":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_04892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular calcium ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular calcium ion homeostasis","type":"exact"},{"name":"regulation of calcium ion concentration","type":"broad"}],"termid":"GO:0006874","terms_by_termid":{"GO:0006874":null,"GO:0032468":null}}


id: PBO:0039315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase","termid":"PBO:0039315"}


id: PBO:0083371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF YCL005W-A; mutations in YCL007C were thought to confer sensitivity to calcofluor white, but this phenotype was later shown to be due to the defect in YCL005W-A","termid":"PBO:0083371"}


id: GO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus as part of sieve element differentiation. The nuclear contents are released and degraded in the cytoplasm at the same time as other organelles are rearranged and the cytosol is degraded.","definition_xrefs":["PMID:25081480","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"sieve element differentiation","termid":"GO:0090603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element enucleation","termid":"GO:0090602"}


id: SO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variable gene that rearranges at the DNA level and codes the variable region of the variable domain of aT-cell receptor chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_V_Gene","synonyms":[{"name":"T_cell_receptor_V_gene","type":"exact"}],"termid":"SO:0002137"}


id: PBO:0062480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily L member 1 pseudogene","termid":"PBO:0062480"}


id: GO:0070358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the controlled movement of a bacterial cell powered by the continuous polymerization of actin at one pole of the cell.","definition_xrefs":["GOC:mah","PMID:15773977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin polymerization-dependent cell motility","synonyms":[{"name":"cell motility by actin tail formation","type":"exact"}],"termid":"GO:0070358"}


id: GO:0102669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: daidzein 7-O-beta-D-glucoside + H2O = daidzein + beta-D-glucose.","definition_xrefs":["GOC:pz","EC:3.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"isoflavone-7-O-glucoside beta-glucosidase activity","secondary_identifiers":["MetaCyc:RXN-3591"],"termid":"GO:0102669"}


id: PBO:0067015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 25, pseudogene","termid":"PBO:0067015"}


id: CHEBI:18385
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine(1+)","termid":"CHEBI:18385"}


id: GO:0034897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(1-ethyl-1,4-dimethyl-pentyl)phenol + O2 + 2 H+ + 2 e- = hydroquinone + 3,6-dimethylheptan-3-ol.","definition_xrefs":["UM-BBD_reactionID:r1358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-(1-ethyl-1,4-dimethyl-pentyl)phenol monooxygenase activity","termid":"GO:0034897"}


id: GO:0072508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of trivalent cations within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete trivalent inorganic cation homeostasis (obsolete GO:0072508)","termid":"GO:0072508"}


id: PBO:0075772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 3","termid":"PBO:0075772"}


id: GO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine and peptidyl-cysteine to form a S-(L-isoglutamyl)-L-cysteine protein cross-link.","definition_xrefs":["RESID:AA0108"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(L-isoglutamyl)-L-cysteine (obsolete GO:0018232)","termid":"GO:0018232"}


id: PBO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5 (predicted)","termid":"PBO:0003672"}


id: PBO:0058040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4261","termid":"PBO:0058040"}


id: GO:0044394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by the addition of a malonyl (CO-CH2-CO) group.","definition_xrefs":["GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein malonylation","termid":"GO:0044394"}


id: PBO:0041080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 pseudogene 1","termid":"PBO:0041080"}


id: GO:0140670
data:
  {"annotated_genes":["SJAG_02606"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106740],"is_not":false,"summary":null,"term":"GO:0140670"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to unload a cohesin complex from sister chromatids.","definition_xrefs":["PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02606":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"cohesin unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cohesin unloading activity","type":"exact"}],"termid":"GO:0140670","terms_by_termid":{"GO:0140670":null}}


id: PBO:0003097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Pmr1","termid":"PBO:0003097"}


id: FYPO:0004203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium import","termid":"FYPO:0001953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased calcium import","synonyms":[{"name":"increased calcium import during mitotic cell cycle","type":"related"},{"name":"increased calcium import during vegetative growth","type":"exact"},{"name":"increased calcium import into cell","type":"exact"},{"name":"increased calcium ion import","type":"exact"},{"name":"increased calcium ion import across plasma membrane","type":"exact"},{"name":"increased calcium uptake","type":"exact"},{"name":"increased calcium uptake into intracellular compartments","type":"related"},{"name":"increased cellular calcium import","type":"exact"}],"termid":"FYPO:0004203"}


id: PBO:0063413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 1B","termid":"PBO:0063413"}


id: GO:0090585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + L-ascorbate(out) = protein cysteine + L-ascorbate-6-phosphate(in).","definition_xrefs":["PMID:15153772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0003674","GO:0022857","GO:0016740"],"is_obsolete":false,"name":"protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity","termid":"GO:0090585"}


id: GO:0016704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for oxidoreductases acting on single donors with incorporation of molecular oxygen that cannot be more accurated categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous (obsolete GO:0016704)","synonyms":[{"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous","type":"exact"}],"termid":"GO:0016704"}


id: PBO:0080581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5B","termid":"PBO:0080581"}


id: PBO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 6","termid":"PBO:0050304"}


id: PBO:0005053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf4","termid":"PBO:0005053"}


id: GO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal tubule over time, from its formation to the mature structure. In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule development","termid":"GO:0072014"}


id: GO:0102945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose(2-) + soyasapogenol B = UDP(3-) + a soyasapogenol B monoglucoside.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"soyasapogenol B UDP-glucosyl transferase activity","secondary_identifiers":["MetaCyc:RXN-9037"],"termid":"GO:0102945"}


id: FYPO:0001744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal biotin import","synonyms":[{"name":"abnormal biotin import across plasma membrane","type":"exact"},{"name":"abnormal biotin import during mitotic cell cycle","type":"related"},{"name":"abnormal biotin import during vegetative growth","type":"exact"},{"name":"abnormal biotin import into cell","type":"exact"},{"name":"abnormal biotin uptake","type":"exact"}],"termid":"FYPO:0001744"}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: PBO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing with AAA domain 1 like","termid":"PBO:0051777"}


id: PBO:0025470
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sapk INteracting protein","termid":"PBO:0025470"}


id: PBO:0054168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1539","termid":"PBO:0054168"}


id: GO:1990551
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92740],"is_not":false,"summary":null,"term":"GO:1990551"}]},"cv_name":"biological_process","definition":"The process in which 2-oxoadipate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11013234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrial 2-oxoadipate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990551","terms_by_termid":{"GO:1990551":null}}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: PBO:0052171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 2","termid":"PBO:0052171"}


id: PBO:0081768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 700","termid":"PBO:0081768"}


id: GO:0050061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain aldehyde + NAD+ = a long-chain carboxylate + NADH + H+. A long-chain aldehyde is one with more than 12 carbons.","definition_xrefs":["MetaCyc:LONG-CHAIN-ALDEHYDE-DEHYDROGENASE-RXN","EC:1.2.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain-aldehyde dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1404","RHEA:10652"],"synonyms":[{"name":"fatty aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"long-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050061"}


id: GO:0052597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a diamine + H2O + O2 = a monoamine + NH3 + hydrogen peroxide.","definition_xrefs":["MetaCyc:RXN-9599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diamine oxidase activity","secondary_identifiers":["EC:1.4.3.22"],"synonyms":[{"name":"diamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052597"}


id: SO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foreign_gene","synonyms":[{"name":"foreign gene","type":"exact"}],"termid":"SO:0000285"}


id: PBO:0004670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase (predicted)","termid":"PBO:0004670"}


id: FYPO:0000735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000120","FYPO:0000002"],"is_obsolete":false,"name":"short meiotic spindle","synonyms":[{"name":"decreased meiotic spindle length","type":"exact"},{"name":"short meiotic spindles","type":"exact"},{"name":"short spindle during meiosis","type":"exact"}],"termid":"FYPO:0000735"}


id: PBO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CSL","termid":"PBO:0001773"}


id: MOD:01534
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01534"}


id: PBO:0056190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A3","termid":"PBO:0056190"}


id: RO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"q inheres in part of w if and only if there exists some p such that q inheres in p and p part of w.","direct_ancestors":[{"relation_name":"is_a","term_name":"depends_on","termid":"RO:0002502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in_part_of","termid":"RO:0002314"}


id: FYPO:0004695
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115733],"is_not":false,"summary":null,"term":"FYPO:0004695"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more diglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular diglyceride level","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular DAG level","type":"exact"},{"name":"increased cellular diacylglycerol level","type":"exact"},{"name":"increased cellular diglyceride level during mitotic cell cycle","type":"related"},{"name":"increased cellular diglyceride level during vegetative growth","type":"exact"},{"name":"increased diglyceride accumulation","type":"related"}],"termid":"FYPO:0004695","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0004695":null}}


id: PR:Q10182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erf4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras modification protein erf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.07c","synonyms":[{"name":"Spom972h-erf4","type":"exact"},{"name":"meiotically up-regulated gene 91 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10182"}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: FYPO:0007435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, elongated, i.e. has a greater length and length:diameter ratio than normal, and has one nucleus when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:12399381","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell during nitrogen starvation","termid":"FYPO:0000998"},{"relation_name":"output_of","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","termid":"FYPO:0001001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated mononucleate cell during nitrogen starvation","synonyms":[{"name":"inviable elongated mononucleate cell during nitrogen depletion","type":"exact"},{"name":"inviable elongated mononucleate cell during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007435"}


id: GO:0009860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of pollen via tip extension of the intine wall.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell tip growth","termid":"GO:0009932"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube growth","termid":"GO:0009860"}


id: GO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075161)","synonyms":[{"name":"negative regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075161"}


id: GO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","termid":"GO:0031585"},{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"negative regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051280"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","synonyms":[{"name":"down regulation of IP3 receptor activity","type":"exact"},{"name":"down-regulation of IP3 receptor activity","type":"exact"},{"name":"downregulation of IP3 receptor activity","type":"exact"},{"name":"inhibition of IP3 receptor activity","type":"narrow"},{"name":"negative regulation of IP3 receptor activity","type":"related"},{"name":"negative regulation of inositol 1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0031586"}


id: PBO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase Mag1","termid":"PBO:0001809"}


id: PBO:0071322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 6","termid":"PBO:0071322"}


id: PR:O13844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19G12.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C19G12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.05","synonyms":[{"name":"Spom972h-SPAC19G12.05","type":"exact"}],"termid":"PR:O13844"}


id: PBO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 19","termid":"PBO:0071154"}


id: GO:2001235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"positively_regulates","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of apoptotic signaling pathway","synonyms":[{"name":"positive regulation of apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001235"}


id: PBO:0043641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPS3 pseudogene 1","termid":"PBO:0043641"}


id: PBO:0087240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine kinase involved in cell cycle regulation and rDNA integrity; associated with late pre-40S particles via its conserved C-terminal domain; prevents premature use of pre-40S particles in translation; association with pre-40S particles regulated by its catalytic ATPase site and likely occurs after the release of Rio2p from these particles; involved in cell cycle progression and processing of the 20S pre-rRNA into mature 18S rRNA; phosphorylates Rpa43p in anaphase to remove Pol I from rDNA","termid":"PBO:0087240"}


id: PBO:0058712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6840","termid":"PBO:0058712"}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: PBO:0067753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 52","termid":"PBO:0067753"}


id: PBO:0040899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 2","termid":"PBO:0040899"}


id: PBO:0042664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 20","termid":"PBO:0042664"}


id: PBO:0066524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGP1 homolog, RAB6A GEF complex partner 1","termid":"PBO:0066524"}


id: PBO:0043624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol-O-methyltransferase domain containing 1","termid":"PBO:0043624"}


id: GO:0050167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(R)-pantothenoyl]-L-cysteine + H+ = (R)-pantetheine + CO2.","definition_xrefs":["RHEA:15077","EC:4.1.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pantothenoylcysteine decarboxylase activity","secondary_identifiers":["MetaCyc:PANTOTHENOYLCYSTEINE-DECARBOXYLASE-RXN","KEGG_REACTION:R02972"],"synonyms":[{"name":"N-((R)-pantothenoyl)-L-cysteine carboxy-lyase activity","type":"related"},{"name":"N-[(R)-pantothenoyl]-L-cysteine carboxy-lyase (pantetheine-forming)","type":"related"},{"name":"N-[(R)-pantothenoyl]-L-cysteine carboxy-lyase activity","type":"related"},{"name":"pantothenylcysteine decarboxylase activity","type":"related"}],"termid":"GO:0050167"}


id: PBO:0076492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell-interacting, activating receptor on myeloid cells 1","termid":"PBO:0076492"}


id: PBO:0056540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence","termid":"PBO:0056540"}


id: PBO:0089530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase Lcb2","termid":"PBO:0089530"}


id: SO:1000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration where the length of the change in the variant is the same as that of the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substitution","secondary_identifiers":["loinc:LA6690-7"],"termid":"SO:1000002"}


id: FYPO:0007417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere clustering is normal (i.e. indistinguishable from wild type) during G0 phase. Normally, telomeres cluster at the nuclear periphery during vegetative growth or G0, but whereas telomeres form two to three clusters in vegetative cells, a single cluster forms in G0.","definition_xrefs":["GO:0120110","PomBase:mah","PMID:31980821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere clustering during G0","synonyms":[{"name":"normal telomere clustering during cell quiescence","type":"exact"},{"name":"normal telomere clustering during quiescence","type":"exact"}],"termid":"FYPO:0007417"}


id: GO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of flower development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:21689171","PMID:19380421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ senescence","termid":"GO:0080187"}


id: PBO:0039645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1B1 pseudogene 1","termid":"PBO:0039645"}


id: PBO:0075032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-43","termid":"PBO:0075032"}


id: PBO:0058801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7843","termid":"PBO:0058801"}


id: GO:0005174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to CD40, a receptor found on the surface of all B-lymphocytes.","definition_xrefs":["ISBN:0120781859","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CD40 receptor binding","termid":"GO:0005174"}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: PBO:0026940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spore_germination_frequency","termid":"PBO:0026940"}


id: PBO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B1","termid":"PBO:0071968"}


id: PBO:0088638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf4","termid":"PBO:0088638"}


id: PBO:0038702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 15","termid":"PBO:0038702"}


id: PBO:0077071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THY1 antisense RNA 1","termid":"PBO:0077071"}


id: PBO:0027959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalase_activity_during_cellular_response_to_nitrosative_stress","termid":"PBO:0027959"}


id: PBO:0028203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028203"}


id: PBO:0018103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, similar to a region of alpha-galactosidase","termid":"PBO:0018103"}


id: PBO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CDC16","termid":"PBO:0015663"}


id: GO:0004300
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxy-fatty acyl-CoA = a enoyl-CoA + H2O. This reaction usually occurs in the reverse direction, leading to the reduction of the double bound of enoyl-CoA in position 2 or 3. Specific reactions catalyzed include: a 4-saturated-(3S)-3-hydroxyacyl-CoA = a (3E)-enoyl-CoA + H2O and a (3S)-3-hydroxyacyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"enoyl-CoA hydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-77256","Reactome:R-HSA-77277","UM-BBD_enzymeID:e0014","Reactome:R-HSA-77344","Reactome:R-HSA-77325","GO:0016510","Reactome:R-HSA-70870","Reactome:R-HSA-70830","Reactome:R-HSA-77301","Reactome:R-HSA-77314","MetaCyc:ENOYL-COA-HYDRAT-RXN","Reactome:R-HSA-77333"],"synonyms":[{"name":"(3S)-3-hydroxyacyl-CoA hydro-lyase activity","type":"related"},{"name":"2-enoyl-CoA hydratase activity","type":"related"},{"name":"2-octenoyl coenzyme A hydrase activity","type":"related"},{"name":"3-hydroxy-fatty acyl-CoA dehydratase","type":"exact"},{"name":"3-hydroxyacyl-CoA dehydratase","type":"exact"},{"name":"acyl coenzyme A hydrase activity","type":"related"},{"name":"beta-hydroxyacid dehydrase activity","type":"related"},{"name":"beta-hydroxyacyl-CoA dehydrase activity","type":"related"},{"name":"enol-CoA hydratase activity","type":"related"},{"name":"enoyl hydrase activity","type":"related"},{"name":"short-chain enoyl-CoA hydratase activity","type":"exact"},{"name":"unsaturated acyl-CoA hydratase activity","type":"related"}],"termid":"GO:0004300","terms_by_termid":{"GO:0102158":null}}


id: PBO:0053660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 837","termid":"PBO:0053660"}


id: GO:0008008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane attack complex protein beta2 chain (obsolete GO:0008008)","synonyms":[{"name":"membrane attack complex protein beta2 chain","type":"exact"}],"termid":"GO:0008008"}


id: PBO:0111859
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain","termid":"PBO:0111859"}


id: PBO:0059419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 5","termid":"PBO:0059419"}


id: PBO:0052082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin interacting protein","termid":"PBO:0052082"}


id: GO:0016616
data:
  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id: GO:0032627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-23 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-23 production","secondary_identifiers":["GO:0072621","GO:0042240"],"synonyms":[{"name":"IL-23 production","type":"exact"},{"name":"interleukin-23 biosynthetic process","type":"narrow"},{"name":"interleukin-23 secretion","type":"narrow"}],"termid":"GO:0032627"}


id: GO:0039654
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.","definition_xrefs":["VZ:992","GOC:bf","UniProtKB-KW:KW-1170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fusion involved in viral entry into host cell","termid":"GO:0039663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion of virus membrane with host endosome membrane","secondary_identifiers":["GO:0075517","GO:0075501"],"synonyms":[{"name":"fusion of virus membrane with host endosomal membrane","type":"exact"},{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via caveolin-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via endocytosis followed by membrane fusion with host endosome","type":"related"},{"name":"viral entry into host cell via endocytosis followed by membrane fusion with the endosome membrane","type":"related"},{"name":"viral penetration via endocytosis followed by caveolae-mediated membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral penetration via endocytosis followed by clathrin-mediated membrane fusion with the endosome membrane","type":"narrow"}],"termid":"GO:0039654"}


id: PBO:0049316
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 4","termid":"PBO:0049316"}


id: PBO:0070261
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 6, pseudogene","termid":"PBO:0070261"}


id: GO:0052542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"defense response by callose deposition","synonyms":[{"name":"callose deposition during defense response","type":"related"},{"name":"callose localization during defense response","type":"related"}],"termid":"GO:0052542"}


id: PBO:0004027
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by P. carnii Trb1","termid":"PBO:0004027"}


id: PBO:0046862
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 1","termid":"PBO:0046862"}


id: GO:0002234
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum is received and converted into a molecular signal.","definition_xrefs":["PMID:10390516","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER overload response","termid":"GO:0006983"},{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"detection of endoplasmic reticulum overloading","synonyms":[{"name":"detection of ER overloading","type":"exact"}],"termid":"GO:0002234"}


id: SO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Expressed in relatively constant amounts without regard to cellular environmental conditions such as the concentration of a particular substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_constitutive","synonyms":[{"name":"transcriptionally constitutive","type":"exact"}],"termid":"SO:0000124"}


id: FYPO:0001723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more ferrichromes measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"ferrichrome absent from cell","synonyms":[{"name":"ferrichrome absent from cell during mitotic cell cycle","type":"related"},{"name":"ferrichrome absent from cell during vegetative growth","type":"exact"},{"name":"siderophore absent from cell","type":"broad"}],"termid":"FYPO:0001723"}


id: PR:P36591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.08c","synonyms":[{"name":"Spom972h-dfr1","type":"exact"}],"termid":"PR:P36591"}


id: GO:0062039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying external to microbial cells. A biofilm is an aggregate of surface-associated cells, and the biofilm matrix is the envelope of polymeric substances that surrounds the cells.","definition_xrefs":["GOC:BHF","PMID:28516088","PMID:27129222","PMID:22571672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"biofilm matrix","termid":"GO:0062039"}


id: GO:0060111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Raised, thickened cuticular ridges that run longitudinally, and in parallel, along the left and right sides of the animal. The alae lie above the hypodermal cells known as the lateral seam cells. In C. elegans, alae are produced in L1 larvae, dauer larvae and adult stage animals, where they consist of three, five, and three ridges of distinct morphology, respectively.","definition_xrefs":["GOC:kmv","GOC:dph","ISSN:15518507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"alae of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"alae of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060111"}


id: GO:0097105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["GOC:BHF","GOC:pr","GOC:sjp","PMID:15797875","PMID:18550748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"presynaptic membrane organization","termid":"GO:0097090"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"presynaptic membrane assembly","synonyms":[{"name":"pre-synaptic membrane assembly","type":"exact"}],"termid":"GO:0097105"}


id: GO:0050105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + O2 = L-xylo-hex-3-ulonolactone + H2O2.","definition_xrefs":["MetaCyc:L-GULONOLACTONE-OXIDASE-RXN","EC:1.1.3.8","RHEA:32363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-gulonolactone oxidase activity","synonyms":[{"name":"GLO activity","type":"related"},{"name":"L-gulono-1,4-lactone:oxygen 3-oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone oxidase activity","type":"related"},{"name":"L-gulono-gamma-lactone:O2 oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone:oxidoreductase activity","type":"related"}],"termid":"GO:0050105"}


id: GO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G1 DNA damage checkpoint (obsolete GO:0072430)","synonyms":[{"name":"detection of DNA damage stimulus involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072430"}


id: GO:0062210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regeneration process by which a damaged or lost shoot regrows or re-differentiates. This process may occur via de-differentiation and subsequent reprogramming of somatic cells or activation of existing undifferentiated (meristematic) cells to produce a new shoot meristem and subsequently a new shoot.","definition_xrefs":["PMID:27143753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot regeneration","synonyms":[{"name":"shoot system regeneration","type":"exact"}],"termid":"GO:0062210"}


id: PBO:0084380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity copper transporter of the vacuolar membrane; mutation confers resistance to toxic copper concentrations, while overexpression confers resistance to copper starvation; regulated by nonsense-mediated mRNA decay pathway","termid":"PBO:0084380"}


id: MOD:01467
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15939799","Unimod:302#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menadione quinone derivative","termid":"MOD:00621"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menadione quinone derivative - site K","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:01467"}


id: PBO:0081908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 875","termid":"PBO:0081908"}


id: PBO:0047349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 2","termid":"PBO:0047349"}


id: PBO:0038598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase very long chain","termid":"PBO:0038598"}


id: GO:1901274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-dehydro-3-deoxy-D-gluconic acid.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00856","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"2-dehydro-3-deoxy-D-gluconic acid metabolic process","termid":"GO:1901272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthetic process","synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconic acid anabolism","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthesis","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid formation","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid synthesis","type":"exact"}],"termid":"GO:1901274"}


id: PBO:0045543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 3 like","termid":"PBO:0045543"}


id: PBO:0073678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 1","termid":"PBO:0073678"}


id: GO:0031850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a delta-type opioid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"delta-type opioid receptor binding","synonyms":[{"name":"delta-type opioid receptor ligand","type":"narrow"},{"name":"enkephalin receptor binding","type":"related"}],"termid":"GO:0031850"}


id: GO:0005355
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[113354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of the hexose monosaccharide glucose from one side of a membrane to the other.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015579","Reactome:R-HSA-499981","Reactome:R-HSA-5653873"],"synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"},{"name":"glucose permease activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0005355","terms_by_termid":{"GO:0005358":null,"GO:0140108":null}}


id: PBO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin reductase","termid":"PBO:0047489"}


id: PBO:0026843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_binding_at_PCB","termid":"PBO:0026843"}


id: FYPO:0007905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which beta-glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucan synthesis","termid":"FYPO:0007904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal beta-glucan synthesis","synonyms":[{"name":"abnormal beta-glucan biosynthetic process","type":"exact"}],"termid":"FYPO:0007905"}


id: PBO:0054348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1741","termid":"PBO:0054348"}


id: FYECO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiabendazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiabendazole","synonyms":[{"name":"TBZ added","type":"exact"}],"termid":"FYECO:0000079"}


id: GO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed orientation of T cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with antigen presenting cell.","definition_xrefs":["GOC:mgi_curators","PMID:11244041","PMID:12615889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of lymphocyte polarity","termid":"GO:0001767"},{"relation_name":"part_of","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of T cell polarity","synonyms":[{"name":"T cell polarization","type":"exact"},{"name":"T lymphocyte polarization","type":"exact"},{"name":"T-cell polarization","type":"exact"},{"name":"establishment of T lymphocyte polarity","type":"exact"},{"name":"establishment of T-cell polarity","type":"exact"},{"name":"establishment of T-lymphocyte polarity","type":"exact"}],"termid":"GO:0001768"}


id: GO:1903808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tyrosine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-tyrosine import across plasma membrane","secondary_identifiers":["GO:0036232"],"synonyms":[{"name":"L-tyrosine import","type":"broad"},{"name":"L-tyrosine import into cell","type":"exact"},{"name":"L-tyrosine uptake","type":"exact"}],"termid":"GO:1903808"}


id: GO:0035226
data:
  {"annotated_genes":["SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66808],"is_not":false,"summary":null,"term":"GO:0035226"}]},"cv_name":"molecular_function","definition":"Binding to the catalytic subunit of glutamate-cysteine ligase.","definition_xrefs":["PMID:12954617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"glutamate-cysteine ligase catalytic subunit binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0035226","terms_by_termid":{"GO:0035226":null}}


id: GO:0061354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the pericardium.","definition_xrefs":["PMID:19056682","GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"planar cell polarity pathway involved in heart morphogenesis","termid":"GO:0061346"},{"relation_name":"part_of","term_name":"pericardium morphogenesis","termid":"GO:0003344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:0061354"}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: GO:0031476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class VI myosin heavy chains and associated light chains. Myosin VI has a single IQ motif in the neck and a tail region with a coiled coil domain followed by a unique globular domain; a unique insertion that enables myosin VI to move towards the pointed or minus end of actin filaments.","direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin VI complex","termid":"GO:0031476"}


id: PBO:0071222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 63","termid":"PBO:0071222"}


id: GO:2000098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000098"}


id: FYPO:0003522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level","synonyms":[{"name":"increased cellular hercynylcysteine sulphoxide level","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level","type":"exact"}],"termid":"FYPO:0003522"}


id: PBO:0091153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab-specific(Ryh1/Ypt6) Ric1-Rgp1 guanyl-nucleotide exchange factor subunit Rgp1/Sat1","termid":"PBO:0091153"}


id: GO:0002832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a response to biotic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to biotic stimulus","synonyms":[{"name":"down regulation of response to biotic stimulus","type":"exact"},{"name":"down-regulation of response to biotic stimulus","type":"exact"},{"name":"downregulation of response to biotic stimulus","type":"exact"},{"name":"inhibition of response to biotic stimulus","type":"narrow"}],"termid":"GO:0002832"}


id: PATO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000726 autonomic function value (obsolete PATO:0000726)","termid":"PATO:0000726"}


id: PBO:0059627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH1 pseudogene 2","termid":"PBO:0059627"}


id: PR:Q9UUC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctu2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUC7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.13c","synonyms":[{"name":"Spom972h-ctu2","type":"exact"}],"termid":"PR:Q9UUC7"}


id: PBO:0060094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 41","termid":"PBO:0060094"}


id: PBO:0074933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 100","termid":"PBO:0074933"}


id: GO:1990044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location on or within a lipid droplet.","definition_xrefs":["PMID:22505614","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to lipid droplet","synonyms":[{"name":"protein localisation to adiposome","type":"exact"},{"name":"protein localisation to lipid body","type":"exact"},{"name":"protein localisation to lipid droplet","type":"exact"},{"name":"protein localisation to lipid particle","type":"exact"},{"name":"protein localization to adiposome","type":"exact"},{"name":"protein localization to lipid body","type":"exact"},{"name":"protein localization to lipid particle","type":"exact"}],"termid":"GO:1990044"}


id: SO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The major class of splice site with dinucleotides GT and AG for donor and acceptor sites, respectively.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000675 canonical_splice_site (obsolete SO:0000675)","synonyms":[{"name":"canonical splice site","type":"exact"}],"termid":"SO:0000675"}


id: GO:1903009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a proteasome complex into its constituent components.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteasome complex disassembly","synonyms":[{"name":"26S proteasome disassembly","type":"narrow"},{"name":"proteasome degradation","type":"exact"},{"name":"proteasome disassembly","type":"exact"}],"termid":"GO:1903009"}


id: PBO:0078385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three prime repair exonuclease 2","termid":"PBO:0078385"}


id: GO:2000326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nuclear receptor transcription coactivator activity (obsolete GO:2000326)","synonyms":[{"name":"negative regulation of ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"negative regulation of ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"}],"termid":"GO:2000326"}


id: GO:0060587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of lipoprotein oxidation","termid":"GO:0034442"},{"relation_name":"regulates","term_name":"lipoprotein lipid oxidation","termid":"GO:0034439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein lipid oxidation","termid":"GO:0060587"}


id: GO:0032059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["GOC:mtg_apoptosis","Wikipedia:Bleb_(cell_biology)","PMID:16624291","PMID:12083798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bleb","synonyms":[{"name":"plasma membrane bleb","type":"exact"}],"termid":"GO:0032059"}


id: GO:0006098
data:
  {"annotated_genes":["SJAG_00633","SJAG_04263","SJAG_00070","SJAG_03852","SJAG_02148","SJAG_04334","SJAG_02696","SJAG_00501","SJAG_05314","SJAG_03934","SJAG_01824","SJAG_02297","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85157,104608,92542,109998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[90706,93073,107757,93163,114571,94363,111492],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009051"},{"annotations":[85900],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[75081],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The metabolic process in which glucose-6-phosphate is oxidized to form carbon dioxide (CO2) and ribulose 5-phosphate, coupled to reduction of NADP+ to NADPH; ribulose 5-P then enters a series of reactions that can yield biosynthetic precursors (ribose-5-phosphate and erythrose-4-phosphate) and glycolytic intermediates (fructose-6-phosphate and glyceraldehyde-3-phosphate).","definition_xrefs":["MetaCyc:PENTOSE-P-PWY","GOC:pde","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH regeneration","termid":"GO:0006740"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_01824":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03852":null,"SJAG_03934":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Pentose_phosphate_pathway","Reactome:R-HSA-71336","KEGG_PATHWAY:map00030"],"synonyms":[{"name":"hexose monophosphate pathway","type":"exact"},{"name":"pentose phosphate pathway","type":"exact"},{"name":"pentose phosphate shunt","type":"exact"},{"name":"pentose-phosphate pathway","type":"exact"}],"termid":"GO:0006098","terms_by_termid":{"GO:0009051":null,"GO:0009052":null,"GO:0043456":null,"GO:1905857":null}}


id: PBO:0051956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 3","termid":"PBO:0051956"}


id: GO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:mah","GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-allose metabolic process","termid":"GO:0019314"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-allose catabolic process","secondary_identifiers":["MetaCyc:PWY0-44"],"synonyms":[{"name":"D-allose breakdown","type":"exact"},{"name":"D-allose catabolism","type":"exact"},{"name":"D-allose degradation","type":"exact"}],"termid":"GO:0019316"}


id: GO:0075036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of appressorium maturation (obsolete GO:0075036)","synonyms":[{"name":"regulation of appressorium maturation on or near host","type":"related"},{"name":"regulation of maturation of appressorium on or near host","type":"exact"}],"termid":"GO:0075036"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: PBO:0081363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF197 antisense RNA 1","termid":"PBO:0081363"}


id: GO:0035382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a sterol is transported across a membrane. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"sterol transmembrane transport","synonyms":[{"name":"sterol membrane transport","type":"exact"}],"termid":"GO:0035382"}


id: PBO:0035704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Zeocin","termid":"PBO:0035704"}


id: GO:0102856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-18:2-sn-glycerol-3-phosphocholine + O2 + a reduced electron acceptor = 1-18:3-2-18:2-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-18:2-2-18:2-sn-glycerol-3-phosphocholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8323","EC:1.14.19.25"],"termid":"GO:0102856"}


id: PBO:0004618
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SiRNA To Chromatin","termid":"PBO:0004618"}


id: PBO:0004173
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ERCC1","termid":"PBO:0004173"}


id: PBO:0074971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-13","termid":"PBO:0074971"}


id: SO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding RNA transcribed from the opposite DNA strand compared with other transcripts and overlap in part with sense RNA.","definition_xrefs":["PMID:19638999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"},{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_lncRNA","synonyms":[{"name":"antisense lncRNA","type":"related"},{"name":"natural antisense transcript","type":"exact"}],"termid":"SO:0001904"}


id: GO:0034775
data:
  {"annotated_genes":["SJAG_03497","SJAG_05213","SJAG_01660","SJAG_01344","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91708],"is_not":false,"summary":null,"term":"GO:0034775"},{"annotations":[91707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[92251,93233,114323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"A process in which glutathione is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transport","termid":"GO:0034635"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transport","termid":"GO:0035443"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"glutathione transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione membrane transport","type":"exact"},{"name":"transmembrane glutathione transport","type":"exact"}],"termid":"GO:0034775","terms_by_termid":{"GO:0034775":null,"GO:0071996":null,"GO:0098709":null,"GO:0160007":null}}


id: PBO:0048554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--fructose-6-phosphate transaminase 1","termid":"PBO:0048554"}


id: PBO:0076834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 1","termid":"PBO:0076834"}


id: SO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif that is active in the DNA form of the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_motif","termid":"SO:0000714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/DNA_motif"],"synonyms":[{"name":"DNA motif","type":"exact"}],"termid":"SO:0000713"}


id: GO:0048396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate determination","termid":"GO:0048395"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate determination","termid":"GO:0048394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate determination","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate determination","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048396"}


id: PATO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complexity quality inhering in a bearer by virtue of the bearer's being intricate and compounded.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complexity","termid":"PATO:0001502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex","termid":"PATO:0001504"}


id: PBO:0057774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2277","termid":"PBO:0057774"}


id: FYPO:0002425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable organization is abnormal during mitosis. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cable. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah","GO:0070648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cable organization during mitosis","synonyms":[{"name":"abnormal actin cable organisation during mitotic interphase","type":"exact"},{"name":"abnormal actin cable organization during mitotic M phase","type":"related"},{"name":"abnormal actin cable organization during mitotic interphase during vegetative growth","type":"exact"},{"name":"abnormal actin cable organization during mitotic nuclear division","type":"exact"},{"name":"abnormal formin-nucleated actin cable organization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002425"}


id: PBO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active site residues absent","termid":"PBO:0003245"}


id: FYPO:0005648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which sister kinetochores separate during the first meiotic nuclear division. Normally sister kinetochores remain together until meiosis II.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I","synonyms":[{"name":"decreased meiosis I sister kinetochore fusion","type":"narrow"},{"name":"decreased meiotic sister kinetochore association in meiotic metaphase I","type":"exact"},{"name":"precocious centromeric dissociation during meiosis I","type":"exact"},{"name":"premature sister kinetochore separation during meiosis I","type":"exact"},{"name":"sister kinetochore separation during first meiotic nuclear division","type":"exact"},{"name":"sister kinetochore separation during meiosis I","type":"exact"},{"name":"split kinetochores during meiosis I","type":"related"}],"termid":"FYPO:0005648"}


id: GO:0050878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the levels of body fluids.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of body fluid levels","termid":"GO:0050878"}


id: PBO:0090545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S21","termid":"PBO:0090545"}


id: PBO:0043384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clavesin 2","termid":"PBO:0043384"}


id: GO:0015446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + arsenite(in) = ADP + phosphate + arsenite(out).","definition_xrefs":["RHEA:11348","PMID:10970874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"},{"relation_name":"is_a","term_name":"arsenate ion transmembrane transporter activity","termid":"GO:1901683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled arsenite transmembrane transporter activity","secondary_identifiers":["TC:3.A.4.1.1","EC:7.3.2.7","MetaCyc:3.6.3.16-RXN"],"synonyms":[{"name":"arsenical pump-driving ATPase activity","type":"related"},{"name":"arsenical resistance ATPase activity","type":"related"},{"name":"arsenical resistance efflux pump","type":"related"},{"name":"arsenite ABC transporter","type":"narrow"},{"name":"arsenite transporting ATPase activity","type":"exact"},{"name":"arsenite-translocating ATPase activity","type":"related"},{"name":"arsenite-transmembrane transporting ATPase activity","type":"related"},{"name":"arsenite-transporting ATPase activity","type":"related"}],"termid":"GO:0015446"}


id: GO:0006855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a xenobiotic, a compound foreign to the organim exposed to it, is transported across a membrane. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:bf","GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"xenobiotic transmembrane transport","synonyms":[{"name":"drug membrane transport","type":"exact"},{"name":"drug transmembrane transport","type":"related"},{"name":"multidrug transport","type":"related"}],"termid":"GO:0006855"}


id: GO:0036056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:sart","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filtration diaphragm","termid":"GO:0036056"}


id: PBO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030004"}


id: GO:0080014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thalianol = a thalian-diol. This reaction is the addition of a hydroxyl group to thalianol ((13R,14R,17E)-podioda-8,17,21-trien-3beta-ol) to create a thalian-diol ((13R,14R,17E)-podioda-8,17,21-trien-3beta,X-diol), where the hydroxyl group may be attached at one of several different available carbons in ring B or C of thalianol, indicated by the X.","definition_xrefs":["MetaCyc:RXN-9631","PMID:18356490","PMID:17474751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"thalianol hydroxylase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0080014"}


id: PBO:0054335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1728","termid":"PBO:0054335"}


id: PBO:0071478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 19","termid":"PBO:0071478"}


id: GO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The smaller of the two subunits of a plastid ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"part_of","term_name":"plastid ribosome","termid":"GO:0009547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plastid small ribosomal subunit","termid":"GO:0000312"}


id: PBO:0003571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADhesioN defective","termid":"PBO:0003571"}


id: PBO:0049977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIGD2A pseudogene 2","termid":"PBO:0049977"}


id: PBO:0066587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho related BTB domain containing 2","termid":"PBO:0066587"}


id: GO:0050382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + uracil 5-carboxylate = CO2 + uracil.","definition_xrefs":["EC:4.1.1.66","RHEA:17685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uracil-5-carboxylate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00973","MetaCyc:URACIL-5-CARBOXYLATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"uracil-5-carboxylate carboxy-lyase (uracil-forming)","type":"related"},{"name":"uracil-5-carboxylate carboxy-lyase activity","type":"related"},{"name":"uracil-5-carboxylic acid decarboxylase activity","type":"related"}],"termid":"GO:0050382"}


id: PBO:0029632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_barrier_septum_during_septation","termid":"PBO:0029632"}


id: GO:0051511
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell morphogenesis","termid":"GO:0010771"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"negatively_regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of unidimensional cell growth","type":"exact"},{"name":"down-regulation of unidimensional cell growth","type":"exact"},{"name":"downregulation of unidimensional cell growth","type":"exact"},{"name":"inhibition of unidimensional cell growth","type":"narrow"},{"name":"negative regulation of cell elongation","type":"narrow"}],"termid":"GO:0051511","terms_by_termid":{"GO:0051517":null}}


id: PBO:0066577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 1","termid":"PBO:0066577"}


id: PBO:0067242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 314, pseudogene","termid":"PBO:0067242"}


id: GO:0018612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dibenzothiophene + NADH + O2 + H+ = NAD+ + cis-1,2-dihydroxy-1,2-dihydrodibenzothiophene.","definition_xrefs":["UM-BBD_reactionID:r0160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dibenzothiophene dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018612"}


id: PBO:0041068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 1","termid":"PBO:0041068"}


id: PBO:0059010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MME antisense RNA 1","termid":"PBO:0059010"}


id: PBO:0088521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5","termid":"PBO:0088521"}


id: PBO:0074609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14A","termid":"PBO:0074609"}


id: PBO:0040946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 17","termid":"PBO:0040946"}


id: GO:0002684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune system process","synonyms":[{"name":"activation of immune system process","type":"narrow"},{"name":"stimulation of immune system process","type":"narrow"},{"name":"up regulation of immune system process","type":"exact"},{"name":"up-regulation of immune system process","type":"exact"},{"name":"upregulation of immune system process","type":"exact"}],"termid":"GO:0002684"}


id: GO:0072194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle tissue development","termid":"GO:0048745"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney smooth muscle tissue development","termid":"GO:0072194"}


id: FYPO:0002854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate-cysteine ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate-cysteine ligase activity","termid":"FYPO:0002853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished glutamate-cysteine ligase activity","synonyms":[{"name":"glutamate-cysteine ligase activity abolished","type":"exact"}],"termid":"FYPO:0002854"}


id: GO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid-encoded DNA-directed RNA polymerase complex that resembles eubacterial multisubunit RNA polymerases, with a core composed of alpha, beta, and beta-prime subunits. An additional subunit, a sigma factor, is required for promoter recognition. PEP-A is generated from the PEP-B form during chloroplast maturation to generate a complex composed of at least thirteen polypeptides that is not sensitive to the antibiotic rifampicin, like its precursor form the PEP-B complex.","definition_xrefs":["PMID:10946105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex A","synonyms":[{"name":"PEP-A","type":"exact"}],"termid":"GO:0000343"}


id: FYPO:0007509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PMID:17434129","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0007509"}


id: GO:0097344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that comprises Rix1p, Ipi1p and Ipi3p, and is required for processing of ITS2 sequences from 35S pre-rRNA. The Rix1 complex has been identified in budding yeast and fission yeast, and members of this complex are conserved in higher eukaryotes.","definition_xrefs":["GOC:vw","PMID:21385875","PMID:14759368","PMID:15260980"],"gene_count":0,"genotype_count":0,"name":"obsolete Rix1 complex (obsolete GO:0097344)","synonyms":[{"name":"IPI complex","type":"exact"}],"termid":"GO:0097344"}


id: GO:0019870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a potassium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"potassium channel regulator activity","termid":"GO:0015459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"potassium channel inhibitor activity","termid":"GO:0019870"}


id: PBO:0017069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, DNAJ domain","termid":"PBO:0017069"}


id: PBO:0081630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF559-ZNF177 readthrough","termid":"PBO:0081630"}


id: SO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an mRNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_region","synonyms":[{"name":"mRNA region","type":"exact"}],"termid":"SO:0000836"}


id: PBO:0073016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit gamma","termid":"PBO:0073016"}


id: GO:0016860
data:
  {"annotated_genes":["SJAG_03414","SJAG_04307","SJAG_03598","SJAG_02648","SJAG_03614","SJAG_00839","SJAG_04046","SJAG_00131","SJAG_04192","SJAG_00288","SJAG_01346","SJAG_02301","SJAG_01455","SJAG_00070","SJAG_04904","SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[95184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043715"},{"annotations":[88781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000247"},{"annotations":[99822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[98048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004452"},{"annotations":[104570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[99678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[88495,87090,96935,112021,106166,84843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003756"},{"annotations":[85158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[103182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[112521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, and no oxidized product appears.","definition_xrefs":["EC:5.3.-.-","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00131":null,"SJAG_00288":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01404":null,"SJAG_01455":null,"SJAG_02301":null,"SJAG_02648":null,"SJAG_03414":null,"SJAG_03598":null,"SJAG_03614":null,"SJAG_04046":null,"SJAG_04192":null,"SJAG_04307":null,"SJAG_04904":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-109998"],"synonyms":[{"name":"intramolecular isomerase activity","type":"exact"},{"name":"intramolecular oxidoreductase activity, other intramolecular oxidoreductases","type":"narrow"}],"termid":"GO:0016860","terms_by_termid":{"GO:0000247":null,"GO:0003756":null,"GO:0003949":null,"GO:0004347":null,"GO:0004452":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0043715":null,"GO:0046523":null}}


id: GO:0008332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a low voltage-gated channel. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","PMID:16382099","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"low voltage-gated calcium channel activity","synonyms":[{"name":"T-type calcium channel","type":"related"},{"name":"low voltage gated calcium channel activity","type":"exact"},{"name":"low voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008332"}


id: PBO:0029512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_vegetative_cell_population_(obsolete_FYPO:0002202)","termid":"PBO:0029512"}


id: PBO:0062068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily B member 1 pseudogene","termid":"PBO:0062068"}


id: PBO:0071465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 6","termid":"PBO:0071465"}


id: PBO:0054779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2192","termid":"PBO:0054779"}


id: PBO:0062713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily J member 1","termid":"PBO:0062713"}


id: FYPO:0006979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular coenzyme Q10 level","synonyms":[{"name":"increased cellular UQ10 level","type":"exact"},{"name":"increased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"increased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"increased cellular ubiquinone 10 level","type":"exact"}],"termid":"FYPO:0006979"}


id: FYPO:0002871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip","synonyms":[{"name":"decreased protein localisation to growing cell tip","type":"exact"},{"name":"decreased protein localization to growing cell end","type":"exact"},{"name":"decreased protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0002871"}


id: GO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonyl-[acyl-carrier protein] = acetoacyl-[acyl-carrier protein] + CoA + CO2.","definition_xrefs":["EC:2.3.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"beta-ketoacyl-acyl-carrier-protein synthase III activity","secondary_identifiers":["MetaCyc:2.3.1.180-RXN","RHEA:12080"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase III activity","type":"related"},{"name":"3-oxoacyl:ACP synthase III activity","type":"related"},{"name":"FabH","type":"related"},{"name":"KAS III","type":"related"},{"name":"KASIII","type":"related"},{"name":"acetyl-CoA:malonyl-acyl-carrier-protein C-acyltransferase activity","type":"related"},{"name":"beta-ketoacyl (acyl carrier protein) synthase III activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase III activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase III activity","type":"related"}],"termid":"GO:0033818"}


id: FYPO:0002333
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04349:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04349","name":"vps28delta","uniquename":"SJAG_04349:allele-1"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_04912:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04912","name":"vps25delta","uniquename":"SJAG_04912:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[115420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[115668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[115407,115405,115406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001440"},{"annotations":[115417,115416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001370"},{"annotations":[115419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"},{"annotations":[115686,115687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115415,115394,115408,115410,115385,115413,115384,115392,115395,115411,115414,115412,115391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115334,115336,115660,115333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[115351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001375"},{"annotations":[115665,115657,115669,115658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[115335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"},{"annotations":[115661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[115387],"is_not":false,"rel_names":["is_a","output_of"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03250":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04280":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04912":null,"SJAG_05207":null},"genotype_count":19,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild 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vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps25delta":{"display_name":"vps25delta","display_uniquename":"vps25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04912:allele-1","expression":"Null"}]}]},"vps28delta":{"display_name":"vps28delta","display_uniquename":"vps28delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04349:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T 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phenotype","type":"exact"}],"termid":"FYPO:0002333","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000644":null,"FYPO:0000731":null,"FYPO:0001132":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0002870":null,"FYPO:0003657":null,"FYPO:0003946":null,"FYPO:0004718":null,"FYPO:0005503":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000815":null}}


id: GO:0052237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052237)","synonyms":[{"name":"aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052237"}


id: PR:Q9UTG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad2 gene.","definition_xrefs":["UniProtKB:Q9UTG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.07c","synonyms":[{"name":"Spom972h-dad2","type":"exact"},{"name":"high osmolarity sensitivity protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein dad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTG8"}


id: GO:0004592
data:
  {"annotated_genes":["SJAG_03679"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94908],"is_not":false,"summary":null,"term":"GO:0004592"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.","definition_xrefs":["EC:6.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pantoate-beta-alanine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PANTOATE-BETA-ALANINE-LIG-RXN","RHEA:10912"],"synonyms":[{"name":"(R)-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"D-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"pantoate-activating enzyme activity","type":"related"},{"name":"pantoic-activating enzyme activity","type":"related"},{"name":"pantothenate synthetase activity","type":"related"}],"termid":"GO:0004592","terms_by_termid":{"GO:0004592":null}}


id: PATO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure","secondary_identifiers":["PATO:0001452"],"synonyms":[{"name":"relational structural quality","type":"exact"}],"termid":"PATO:0000141"}


id: MOD:01096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-benzyl-L-threonine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-benzyl-L-threonine","termid":"MOD:01096"}


id: GO:0010567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a ketone, carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"regulates","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"regulation of ketone catabolic process","termid":"GO:0010567"}


id: FYPO:0007619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin during cellular response to oxidative stress","synonyms":[{"name":"normal protein localisation to chromatin during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during oxidative stress response","type":"exact"}],"termid":"FYPO:0007619"}


id: FYPO:0007015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of tRNA genes is increased.","definition_xrefs":["PomBase:mah","PMID:31294478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at tRNA genes","termid":"FYPO:0004033"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of transfer RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007015"}


id: PBO:0063277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 3","termid":"PBO:0063277"}


id: GO:0046417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chorismate, the anion of (3R-trans)-3-((1-carboxyethenyl)oxy)-4-hydroxy-1,5-cyclohexadiene-1-carboxylic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"chorismate metabolic process","synonyms":[{"name":"chorismate metabolism","type":"exact"}],"termid":"GO:0046417"}


id: PBO:0074913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83B","termid":"PBO:0074913"}


id: GO:0034090
data:
  {"annotated_genes":["SJAG_04259","SJAG_01601","SJAG_03926","SJAG_03681","SJAG_01082","SJAG_03989","SJAG_01805","SJAG_00229","SJAG_04126","SJAG_00600"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97963,109412,109968,110669,112065,89983,97439,100665,95294,104003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of meiotic sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034090","terms_by_termid":{"GO:1990813":null}}


id: PBO:0062008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 2","termid":"PBO:0062008"}


id: PBO:0068460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 36, pseudogene","termid":"PBO:0068460"}


id: PBO:0083416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the ORF PTC2/YER089C; identified by gene-trapping, expression analysis, and homology searching","termid":"PBO:0083416"}


id: PBO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLK/STY/LAMMEr subfamily","termid":"PBO:0000517"}


id: SO:1000105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000105 sequence_variant_affecting_polypeptide_amino_acid_sequence (obsolete SO:1000105)","synonyms":[{"name":"mutation affecting polypeptide amino acid sequence","type":"related"},{"name":"sequence variant affecting polypeptide amino acid sequence","type":"exact"}],"termid":"SO:1000105"}


id: GO:1901388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta activation (obsolete GO:1901388)","synonyms":[{"name":"regulation of L-TGF-beta activation","type":"exact"},{"name":"regulation of TGF-B activation","type":"exact"},{"name":"regulation of TGF-beta activation","type":"exact"},{"name":"regulation of TGFB activation","type":"exact"},{"name":"regulation of TGFbeta activation","type":"exact"},{"name":"regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901388"}


id: PBO:0089847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, protein phosphatase regulatory subunit","termid":"PBO:0089847"}


id: PBO:0087206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; methylates translational release factor Mrf1p; similar to E.coli PrmC; is not an essential gene","termid":"PBO:0087206"}


id: MOD:00227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to omega-N-phospho-L-arginine.","definition_xrefs":["PubMed:8300603","RESID:AA0222","Unimod:21#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"omega-N-phospho-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(N'-phosphonocarbamimidamido)pentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([amino(phosphonoamino)methylidene]amino)pentanoic acid","type":"exact"},{"name":"MOD_RES Phosphoarginine","type":"exact"},{"name":"N(gamma)-phosphoarginine","type":"exact"},{"name":"N(omega)-phosphono-L-arginine","type":"exact"},{"name":"N5-[imino(phosphonoamino)methyl]-L-ornithine","type":"exact"},{"name":"PArg","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"alpha-amino-delta-phosphonoguanidinovaleric acid","type":"exact"},{"name":"omega-N-phospho-L-arginine","type":"exact"},{"name":"phosphoarginine","type":"exact"}],"termid":"MOD:00227"}


id: FYPO:0006506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during mitotic G1 phase","synonyms":[{"name":"normal RNA accumulation during mitotic G1 phase","type":"related"},{"name":"normal RNA level during G1 phase during vegetative growth","type":"exact"},{"name":"normal RNA level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"normal mRNA level during mitotic G1 phase","type":"narrow"},{"name":"normal transcript level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006506"}


id: GO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic M phase","synonyms":[{"name":"M phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051327"}


id: PBO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_kinetochore_sliding_during_chromosome_recapture","termid":"PBO:0033791"}


id: GO:0070052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type V collagen trimer.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen binding","termid":"GO:0005518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"collagen V binding","termid":"GO:0070052"}


id: GO:0140441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an arachidonoyl (systematic name, (5Z,8Z,11Z,14Z)-eicosatetraenoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: in the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + L-cysteinyl-[protein] = CoA + S-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-L-cysteinyl-[protein].","definition_xrefs":["RHEA:59748","PMID:22247542","PMID:12681491","PMID:22968831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"protein-cysteine S-arachidonoyltransferase activity","termid":"GO:0140441"}


id: GO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organized mass of hyphae is formed and numerous infective hyphae develop from the hyphae mass.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"infection cushion formation","synonyms":[{"name":"infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075183"}


id: FYECO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was altered in the experiment, compared to expressing the gene from the genome and its endogenous promoter.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000003 expression level (obsolete FYECO:0000003)","termid":"FYECO:0000003"}


id: GO:0050794
data:
  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id: PBO:0070748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 4","termid":"PBO:0070748"}


id: GO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell contributing to the specification of the animal/vegetal axis of an oocyte.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in animal/vegetal axis specification (obsolete GO:0060833)","synonyms":[{"name":"Wnt receptor signaling pathway involved in animal/vegetal axis specification","type":"exact"},{"name":"Wnt receptor signalling pathway involved in animal/vegetal axis specification","type":"exact"},{"name":"Wnt- activated signaling pathway involved in animal/vegetal axis specification","type":"exact"}],"termid":"GO:0060833"}


id: PBO:0074338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1","termid":"PBO:0074338"}


id: PBO:0049425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 2","termid":"PBO:0049425"}


id: PBO:0084561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif","termid":"PBO:0084561"}


id: PBO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf29","termid":"PBO:0004050"}


id: PBO:0063052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylglycine alpha-amidating monooxygenase","termid":"PBO:0063052"}


id: MOD:00373
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links L-tyrosine residues with an ether bond to form 3'-(O4'-L-tyrosinyl)-L-tyrosine.","definition_xrefs":["PubMed:8702710","DeltaMass:0","PubMed:12719529","PubMed:7115340","RESID:AA0368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(O4'-L-tyrosinyl)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[3-(4-[(2S)-2-amino-2-carboxyethyl]phenoxy)-4-hydroxyphenyl]propanoic acid","type":"exact"},{"name":"2-amino-3-[4-(5-[(2S)-2-amino-2-carboxyethyl]-2-hydroxyphenoxy)phenyl]propanoic acid","type":"exact"},{"name":"3'-(L-tyros-O4'-yl)-L-tyrosine","type":"exact"},{"name":"CROSSLNK Isodityrosine (Tyr-Tyr)","type":"exact"},{"name":"IsodiTyr (Crosslink)","type":"exact"},{"name":"O-(5-(2-amino-2-carboxyethyl)-2-hydroxyphenyl)-L-tyrosine","type":"exact"},{"name":"isodityrosine","type":"exact"}],"termid":"MOD:00373"}


id: PBO:0048084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 5","termid":"PBO:0048084"}


id: GO:0140261
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that monoubiquitinates histone H2A on K119, thus it facilitates the maintenance of the transcriptionally repressive state of some genes, such as BCL6. It consists of the corepressor BCOR or BCORL1, a Polycomb group (PcG) and a SCF ubiquitin ligase subcomplexes. In mammals, the core subunits of the complex include the PcG and PcG-associated proteins NSPC1, RING1, RNF2, and RYBP and the components of the SCF ubiquitin ligase, SKP1, and FBXL10.","definition_xrefs":["PMID:22325352","PMID:24515802","PMID:16943429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"BCOR complex","synonyms":[{"name":"BCL6 corepressor (BCOR) complex","type":"exact"},{"name":"BCOR/BCORL1 complex","type":"exact"},{"name":"PRC1.1 complex","type":"exact"},{"name":"non-canonical BCOR-PRC1.1 complex","type":"exact"},{"name":"non-canonical PRC1-BCOR complex","type":"exact"}],"termid":"GO:0140261"}


id: PBO:0058871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9903","termid":"PBO:0058871"}


id: GO:0019056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus modulates the frequency, rate or extent of its host's transcription.","definition_xrefs":["PMID:7799962"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host transcription (obsolete GO:0019056)","synonyms":[{"name":"modification of host transcription","type":"exact"},{"name":"modulation by virus of host transcription","type":"narrow"},{"name":"perturbation of host cell transcription","type":"exact"}],"termid":"GO:0019056"}


id: PBO:0086322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hexose transporter family members; expression is induced in low glucose and repressed in high glucose; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086322"}


id: GO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:mah","GOC:BHF","CL:0000057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast activation","termid":"GO:0072537"}


id: GO:0102487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dUTP + 2 H2O = dUMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz","EC:3.6.1.5"],"gene_count":0,"genotype_count":0,"name":"obsolete dUTP phosphohydrolase activity (obsolete GO:0102487)","secondary_identifiers":["https://github.com/geneontology/go-ontology/issues/23454","MetaCyc:RXN-14199"],"termid":"GO:0102487"}


id: PR:O13966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aconitate hydratase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01274","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.06c","secondary_identifiers":["UniProtKB:O13966"],"synonyms":[{"name":"Aconitase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACO2","type":"exact"},{"name":"citrate hydro-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13966"}


id: PBO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc4 (predicted)","termid":"PBO:0000653"}


id: PBO:0067102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 144, pseudogene","termid":"PBO:0067102"}


id: PBO:0085310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); an enzyme that catalyzes that conversion of CTP + phosphate into diphosphate + CDP-diaclglyerol, a critical step in the synthesis of all major yeast phospholipids; human homolog CDS1 can complement yeast cds1 null mutant","termid":"PBO:0085310"}


id: PBO:0044159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase like 2","termid":"PBO:0044159"}


id: PBO:0086621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086621"}


id: GO:1905024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane repolarization during ventricular cardiac muscle cell action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rph","PMID:19893015","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ventricular cardiac muscle cell membrane repolarization","termid":"GO:0060307"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"regulates","term_name":"membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:0098915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"regulation of electrocardiogram T wave","type":"related"},{"name":"regulation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"regulation of ventricular repolarization","type":"related"}],"termid":"GO:1905024"}


id: PBO:0062773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 55 subfamily B member 1 pseudogene","termid":"PBO:0062773"}


id: PBO:0089717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1","termid":"PBO:0089717"}


id: GO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during action potential","termid":"GO:0086010"}


id: PBO:0005375
data:
  {"annotated_genes":["SJAG_MIT20","SJAG_MIT13","SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56003,56014,56023],"is_not":false,"summary":null,"term":"PBO:0005375"}]},"cv_name":"EC numbers","gene_count":3,"genes_by_uniquename":{"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"is_obsolete":false,"name":"1.9.3.1","termid":"PBO:0005375","terms_by_termid":{"PBO:0005375":null}}


id: GO:0006005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-fucose (6-deoxy-L-galactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose biosynthetic process","termid":"GO:0042353"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-fucose biosynthetic process","synonyms":[{"name":"L-fucose anabolism","type":"exact"},{"name":"L-fucose biosynthesis","type":"exact"},{"name":"L-fucose formation","type":"exact"},{"name":"L-fucose synthesis","type":"exact"}],"termid":"GO:0006005"}


id: PBO:0065546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 synthase","termid":"PBO:0065546"}


id: PBO:0074196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 6","termid":"PBO:0074196"}


id: PBO:0071885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 23","termid":"PBO:0071885"}


id: PBO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 6","termid":"PBO:0045648"}


id: PBO:0027410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_thioredoxin_peroxidase_activity","termid":"PBO:0027410"}


id: PBO:0040076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRDC3 antisense RNA 1","termid":"PBO:0040076"}


id: PBO:0059984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 4","termid":"PBO:0059984"}


id: GO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 3''-phosphate.","definition_xrefs":["EC:2.7.1.87","RHEA:18377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"streptomycin 3''-kinase activity","secondary_identifiers":["MetaCyc:STREPTOMYCIN-3-KINASE-RXN","KEGG_REACTION:R02227"],"synonyms":[{"name":"ATP:streptomycin 3''-phosphotransferase activity","type":"related"},{"name":"streptomycin 3''-kinase (phosphorylating)","type":"related"},{"name":"streptomycin 3''-phosphotransferase activity","type":"related"}],"termid":"GO:0050299"}


id: MOD:00882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-aminoethyl)cysteine.","definition_xrefs":["Unimod:472#S","DeltaMass:171","PubMed:12923550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminoethyl)cysteine (Ser)","synonyms":[{"name":"AEC-MAEC","type":"related"},{"name":"Aminoethyl Cysteinyl (AECys)","type":"exact"},{"name":"aminoethylcysteine","type":"related"}],"termid":"MOD:00882"}


