# terms

id: GO:0030746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoflavone = S-adenosyl-L-homocysteine + 4'-O-methylisoflavone.","definition_xrefs":["EC:2.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isoflavone 4'-O-methyltransferase activity","secondary_identifiers":["RHEA:31739","MetaCyc:ISOFLAVONE-4-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"4'-hydroxyisoflavone methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:isoflavone 4'-O-methyltransferase activity","type":"related"},{"name":"isoflavone O-methyltransferase activity","type":"related"},{"name":"isoflavone methyltransferase activity","type":"related"}],"termid":"GO:0030746"}


id: RO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"RO:0002264"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_or_involved_in_regulation_of","termid":"RO:0002431"}


id: FYPO:0003528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the actomyosin contractile ring is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to actomyosin contractile ring","synonyms":[{"name":"ectopic protein localization to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring","type":"exact"},{"name":"protein mislocalised to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytokinetic contractile ring","type":"exact"},{"name":"protein mislocalized to mitotic contractile ring","type":"exact"}],"termid":"FYPO:0003528"}


id: PBO:0057875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-4","termid":"PBO:0057875"}


id: GO:0009600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a nematode is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nematode","synonyms":[{"name":"perception of nematode","type":"related"}],"termid":"GO:0009600"}


id: PBO:0069070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 317, pseudogene","termid":"PBO:0069070"}


id: PR:O94448
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAAX prenyl protease 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13046:SF0","PRO:DNx","OMA:SCHPO00351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.02","secondary_identifiers":["UniProtKB:O94448"],"synonyms":[{"name":"PPSEP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RCE1","type":"exact"},{"name":"prenyl protein-specific endoprotease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94448"}


id: GO:1902279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cholecystokinin signaling pathway that results in positive regulation of pancreatic amylase secretion.","definition_xrefs":["PMID:19028687","GOC:jc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystokinin signaling pathway","termid":"GO:0038188"},{"relation_name":"is_a","term_name":"positive regulation of pancreatic amylase secretion","termid":"GO:1902278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","synonyms":[{"name":"CCK-induced amylase release in pancreatic cell","type":"exact"},{"name":"CCK-mediated pancreatic amylase secretion","type":"exact"},{"name":"CCK-stimulated pancreatic amylase release","type":"exact"},{"name":"activation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"narrow"},{"name":"cholecystokinin-mediated pancreatic amylase secretion","type":"exact"},{"name":"up regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"up-regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"upregulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"}],"termid":"GO:1902279"}


id: PBO:0109089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 3","termid":"PBO:0109089"}


id: PR:O13839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fin1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"Spom972h-fin1","type":"exact"}],"termid":"PR:O13839"}


id: SO:0000077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region sequence that is complementary to a sequence of messenger RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense","secondary_identifiers":["http://en.wikipedia.org/wiki/Antisense"],"termid":"SO:0000077"}


id: FYPO:0000300
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- hyperactive (chk1-hyp)","reference":"PMID:23090706","type":"exact"},{"name":"chk1-hyperactive (chk1-hyp)","reference":"PMID:20368354","type":"exact"}],"uniquename":"SJAG_01680:allele-2"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_02763:allele-6":{"allele_type":"amino_acid_mutation","description":"S499A; S538A; T620A; T638A; S651A","gene_uniquename":"SJAG_02763","name":"ned1-5A","synonyms":[{"name":"refractory to potential proline-directed kinase phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-6"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K 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id: PBO:0003726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding protein, transcription factor Sre1","termid":"PBO:0003726"}


id: MOD:00271
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, the C-3' of a tyrosine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0266","PubMed:8325841","PubMed:9095195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-tyrosine residue","termid":"MOD:02075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-tyrosine","synonyms":[{"name":"(10S,11S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-10-(2-hydroxy-5-[(S)-2-amino-2-carboxy]ethylphenyl)-3,8,13,17-tetramethyl-21H,23H-10,11-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-(tyros-3'-yl)-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-tyrosine","type":"exact"}],"termid":"MOD:00271"}


id: PBO:0056165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAD2L1 binding protein","termid":"PBO:0056165"}


id: GO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coagulation, the process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coagulation","synonyms":[{"name":"regulation of clotting","type":"exact"}],"termid":"GO:0050818"}


id: PBO:0091014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc6","termid":"PBO:0091014"}


id: PBO:0002924
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF35","termid":"PBO:0002924"}


id: PBO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27/L28","termid":"PBO:0004399"}


id: PBO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 11","termid":"PBO:0070454"}


id: GO:1901184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERBB signaling pathway","synonyms":[{"name":"regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"regulation of EGFR family signaling pathway","type":"related"},{"name":"regulation of ERBB signalling pathway","type":"exact"},{"name":"regulation of ErbB signaling","type":"exact"}],"termid":"GO:1901184"}


id: PBO:0084450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannose-6-phosphate isomerase; catalyzes the interconversion of fructose-6-P and mannose-6-P; required for early steps in protein mannosylation","termid":"PBO:0084450"}


id: PATO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a molecular entity by virtue of the molecular entity possessing more protons overall than electrons, thus having an overall positive charge.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric charge","termid":"PATO:0002193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positive charge","termid":"PATO:0002195"}


id: GO:0031545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1234181","Reactome:R-HSA-1234177","RHEA:63484","Reactome:R-HSA-1234166","Reactome:R-HSA-1234179","Reactome:R-HSA-1234173","Reactome:R-HSA-1234165"],"synonyms":[{"name":"HIF-type prolyl 4-hydroxylase","type":"narrow"},{"name":"prolyl 4-hydroxylase","type":"broad"}],"termid":"GO:0031545"}


id: PBO:0087699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the prohibitin complex (Phb1p-Phb2p); prohibitin is a 1.2 MDa ring-shaped inner mitochondrial membrane chaperone that stabilizes newly synthesized proteins; determinant of replicative life span; involved in mitochondrial segregation; prohibitin deficiency induces a mitochondrial unfolded protein response (mtUPR)","termid":"PBO:0087699"}


id: PBO:0051732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 1","termid":"PBO:0051732"}


id: PBO:0004073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol binding protein Bzz1 (predicted)","termid":"PBO:0004073"}


id: PBO:0091551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane xenobiotic transmembrane transporter Mfs1","termid":"PBO:0091551"}


id: PBO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_response_phenotype_during_vegetative_growth","termid":"PBO:0030890"}


id: PBO:0084582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL060C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL061C","termid":"PBO:0084582"}


id: PBO:0026982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Brc1_foci","termid":"PBO:0026982"}


id: GO:0006863
data:
  {"annotated_genes":["SJAG_00760","SJAG_04717","SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[108727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[111314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[84665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transport","termid":"GO:0015851"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"purine nucleobase transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015852"],"synonyms":[{"name":"purine base transmembrane transport","type":"exact"},{"name":"purine base transport","type":"exact"},{"name":"purine transmembrane transport","type":"related"},{"name":"purine transport","type":"related"}],"termid":"GO:0006863","terms_by_termid":{"GO:0042906":null,"GO:0098702":null,"GO:0098710":null,"GO:0140140":null}}


id: PBO:0051791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing H","termid":"PBO:0051791"}


id: PBO:0085521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24A has a paralog, RPS24B, that arose from the whole genome duplication","termid":"PBO:0085521"}


id: FYPO:0003249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromeric dh repeat regions is lower than normal.","definition_xrefs":["PMID:22291963","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone H3 in cell","termid":"FYPO:0004578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone H3 at dh repeat","synonyms":[{"name":"decreased level of histone H3 at dh repeat during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 at dh repeat during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 at dh repeat","type":"exact"}],"termid":"FYPO:0003249"}


id: GO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-8 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-8 receptor binding","synonyms":[{"name":"IL-8","type":"narrow"},{"name":"interleukin-8 receptor ligand","type":"narrow"}],"termid":"GO:0005153"}


id: PBO:0047148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM181A antisense RNA 1","termid":"PBO:0047148"}


id: PBO:0053231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lengsin, lens protein with glutamine synthetase domain","termid":"PBO:0053231"}


id: PBO:0085668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair (NER); homologous to RAD4","termid":"PBO:0085668"}


id: PBO:0082205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the second alpha-1,2-linked mannose of the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082205"}


id: PBO:0027715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_5'-end_processing","termid":"PBO:0027715"}


id: PBO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 23","termid":"PBO:0070652"}


id: PBO:0061224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein with MIF4G domain 1","termid":"PBO:0061224"}


id: GO:2001287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"negatively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of caveolin-mediated endocytosis","synonyms":[{"name":"negative regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"negative regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"negative regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001287"}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: GO:0050437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (-)-endo-fenchol + diphosphate.","definition_xrefs":["EC:4.2.3.10","RHEA:20565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(-)-endo-fenchol synthase activity","secondary_identifiers":["MetaCyc:4.2.3.10-RXN","KEGG_REACTION:R02004"],"synonyms":[{"name":"(-)-endo-fenchol cyclase activity","type":"related"},{"name":"geranyl pyrophosphate:(-)-endo-fenchol cyclase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-endo-fenchol-forming]","type":"related"}],"termid":"GO:0050437"}


id: PBO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone PARylation factor 1","termid":"PBO:0050533"}


id: FYPO:0006380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"normal protein localization to vacuole during nitrogen starvation","synonyms":[{"name":"normal protein localisation to vacuole during nitrogen starvation","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen depletion","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006380"}


id: PBO:0068742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 5, pseudogene","termid":"PBO:0068742"}


id: GO:0032698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"negatively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-15 production","secondary_identifiers":["GO:0045373"],"synonyms":[{"name":"down regulation of interleukin-15 production","type":"exact"},{"name":"down-regulation of interleukin-15 production","type":"exact"},{"name":"downregulation of interleukin-15 production","type":"exact"},{"name":"inhibition of interleukin-15 production","type":"narrow"},{"name":"negative regulation of IL-15 production","type":"exact"},{"name":"negative regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032698"}


id: PBO:0078587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60","termid":"PBO:0078587"}


id: PATO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000850 relative auditory ability (obsolete PATO:0000850)","termid":"PATO:0000850"}


id: PBO:0055230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2656","termid":"PBO:0055230"}


id: GO:0002663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"positively_regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell tolerance induction","synonyms":[{"name":"activation of B cell tolerance induction","type":"narrow"},{"name":"positive regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"positive regulation of B-cell tolerance induction","type":"exact"},{"name":"positive regulation of B-lymphocyte tolerance induction","type":"exact"},{"name":"stimulation of B cell tolerance induction","type":"narrow"},{"name":"up regulation of B cell tolerance induction","type":"exact"},{"name":"up-regulation of B cell tolerance induction","type":"exact"},{"name":"upregulation of B cell tolerance induction","type":"exact"}],"termid":"GO:0002663"}


id: PBO:0076173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 4","termid":"PBO:0076173"}


id: GO:0010268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of brassinosteroids within an organism or cell.","definition_xrefs":["PMID:15908602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brassinosteroid homeostasis","termid":"GO:0010268"}


id: PBO:0057530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR646 host gene","termid":"PBO:0057530"}


id: PBO:0085788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function","termid":"PBO:0085788"}


id: PBO:0073136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC16 homolog B, endoplasmic reticulum export factor","termid":"PBO:0073136"}


id: GO:0032034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin II heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin head/neck binding","termid":"GO:0032028"},{"relation_name":"is_a","term_name":"myosin II heavy chain binding","termid":"GO:0032038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"myosin II head/neck binding","termid":"GO:0032034"}


id: GO:0075201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a threadlike, tubular structure, which may contain multiple nuclei and may or may not be divided internally by septa or cross-walls, for the purpose of penetration into its host organism. In the case of an appressorium existing, this term is defined in further details as the process in which the symbiont penetration peg expands to form a hypha which traverses the epidermal cell and emerges into the intercellular space of the mesophyll tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26441323","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration hypha formation","synonyms":[{"name":"formation of symbiont penetration hypha for entry into host","type":"related"},{"name":"symbiont penetration hypha formation for entry into host","type":"related"}],"termid":"GO:0075201"}


id: PBO:0072255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 30","termid":"PBO:0072255"}


id: FYPO:0005613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type) when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nuclear envelope","termid":"FYPO:0005612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope during G0 to G1 transition","synonyms":[{"name":"normal protein localisation to nuclear envelope during G0 to G1 transition","type":"exact"},{"name":"normal protein localization after G0 to G1 transition","type":"exact"},{"name":"normal protein localization during cell cycle re-entry","type":"exact"},{"name":"normal protein localization during cell quiescence to G1 transition","type":"exact"},{"name":"normal protein localization during exit from cell quiescence","type":"exact"},{"name":"normal protein localization during quiescence to G1 transition","type":"exact"},{"name":"normal protein localization during recovery from quiescence","type":"exact"},{"name":"normal protein relocalization to nuclear envelope during G0 to G1 transition","type":"narrow"}],"termid":"FYPO:0005613"}


id: GO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell","termid":"GO:0043657"}


id: PBO:0077558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 265","termid":"PBO:0077558"}


id: PBO:0038968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoethanethiol dioxygenase","termid":"PBO:0038968"}


id: PBO:0078503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 regulated inhibitor of apoptosis 1 pseudogene 1","termid":"PBO:0078503"}


id: PBO:0053428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 373","termid":"PBO:0053428"}


id: PBO:0078166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta constant 1","termid":"PBO:0078166"}


id: PBO:0089458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak2","termid":"PBO:0089458"}


id: PBO:0089393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic60","termid":"PBO:0089393"}


id: GO:0007598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of the self-limited process linking exposure and activation of tissue factor to the activation of clotting factor X.","definition_xrefs":["GOC:add","GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}


id: GO:1903316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitrogen cycle metabolic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"positively_regulates","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0071941","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitrogen cycle metabolic process","synonyms":[{"name":"activation of nitrogen cycle metabolic process","type":"narrow"},{"name":"up regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"up-regulation of nitrogen cycle metabolic process","type":"exact"},{"name":"upregulation of nitrogen cycle metabolic process","type":"exact"}],"termid":"GO:1903316"}


id: PBO:0087757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease;","termid":"PBO:0087757"}


id: PBO:0049813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 5","termid":"PBO:0049813"}


id: PBO:0065840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 5","termid":"PBO:0065840"}


id: PBO:0077247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and death domain 1","termid":"PBO:0077247"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: MOD:01537
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01537"}


id: GO:0006429
data:
  {"annotated_genes":["SJAG_04738","SJAG_02015"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91224,94264],"is_not":false,"summary":null,"term":"GO:0006429"}]},"cv_name":"biological_process","definition":"The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. The leucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a leucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"leucyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006429","terms_by_termid":{"GO:0006429":null}}


id: PBO:0086104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of cytochrome c oxidase; exists as an oligomer; described as both an integral mitochondrial inner membrane protein facing the intermembrane space (IMS) and as a soluble IMS protein; contains a twin Cx9C motif; imported into the IMS via the MIA import machinery","termid":"PBO:0086104"}


id: GO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1-alpha-D-galactosyl-myo-inositol = raffinose + myo-inositol.","definition_xrefs":["EC:2.4.1.82","MetaCyc:2.4.1.82-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"galactinol-sucrose galactosyltransferase activity","secondary_identifiers":["RHEA:20161"],"synonyms":[{"name":"1-alpha-D-galactosyl-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"alpha-D-galactosyl-(1->3)-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"galactinol:sucrose 6-galactosyl transferase activity","type":"exact"},{"name":"galactosyltransferase, galactinol-sucrose","type":"exact"},{"name":"raffinose synthase activity","type":"exact"}],"termid":"GO:0047274"}


id: FYPO:0001837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle pole body","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"increased duration of protein localization to mitotic SPB","type":"exact"},{"name":"increased duration of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001837"}


id: PBO:0061672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 58","termid":"PBO:0061672"}


id: PBO:0060042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 30","termid":"PBO:0060042"}


id: GO:0046977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TAP protein, transporter associated with antigen processing protein. TAP protein is a heterodimeric peptide transporter consisting of the subunits TAP1 and TAP2.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TAP binding","termid":"GO:0046977"}


id: PBO:0051972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodotyrosine deiodinase","termid":"PBO:0051972"}


id: PBO:0043840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 2 pseudogene 1","termid":"PBO:0043840"}


id: FYPO:0003741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which cytochrome-c oxidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"},{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000652","FYPO:0000002","FYPO:0001985","FYPO:0000707","FYPO:0002114","FYPO:0000654","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"abolished cytochrome-c oxidase activity","synonyms":[{"name":"cytochrome-c oxidase activity abolished","type":"exact"}],"termid":"FYPO:0003741"}


id: SO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group III introns are introns found in the mRNA of the plastids of euglenoid protists. They are spliced by a two step transesterification with bulged adenosine as initiating nucleophile.","definition_xrefs":["PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_III_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_III_intron"],"synonyms":[{"name":"group III intron","type":"exact"}],"termid":"SO:0001213"}


id: FYPO:0004837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing little or no glucose.","definition_xrefs":["PMID:25411338","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002060","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth during glucose starvation","synonyms":[{"name":"abolished cell population growth during glucose depletion","type":"exact"},{"name":"abolished cell population growth during glucose deprivation","type":"exact"},{"name":"abolished cell population growth during glucose limitation","type":"related"},{"name":"abolished growth during glucose starvation","type":"broad"},{"name":"abolished vegetative cell population growth during glucose starvation","type":"exact"},{"name":"cell population growth during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0004837"}


id: GO:0015348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete prostaglandin/thromboxane transporter activity (obsolete GO:0015348)","synonyms":[{"name":"prostaglandin/thromboxane transporter activity","type":"exact"}],"termid":"GO:0015348"}


id: GO:0014735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle atrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle atrophy","termid":"GO:0014735"}


id: PBO:0078534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 26B, pseudogene","termid":"PBO:0078534"}


id: PBO:0058504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5694","termid":"PBO:0058504"}


id: PBO:0072511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 40","termid":"PBO:0072511"}


id: GO:0061907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AMPA glutamate receptor activity.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:20739563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of glutamate receptor signaling pathway","termid":"GO:1900450"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"},{"relation_name":"is_a","term_name":"regulation of AMPA receptor activity","termid":"GO:2000311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of AMPA receptor activity","termid":"GO:0061907"}


id: PBO:0048087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 8","termid":"PBO:0048087"}


id: GO:0010366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of an ethylene biosynthetic process.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethylene biosynthetic process","termid":"GO:0010364"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sulfur amino acid metabolic process","termid":"GO:0031336"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"negatively_regulates","term_name":"ethylene biosynthetic process","termid":"GO:0009693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ethylene biosynthetic process","termid":"GO:0010366"}


id: SO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a polycistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"transcribed_to","term_name":"polycistronic_transcript","termid":"SO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_polycistronic_transcript","synonyms":[{"name":"gene with polycistronic transcript","type":"exact"}],"termid":"SO:0000690"}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: GO:0018886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon tetrachloride metabolic process","termid":"GO:0018885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic carbon tetrachloride metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ctc"],"synonyms":[{"name":"anaerobic carbon tetrachloride metabolism","type":"exact"}],"termid":"GO:0018886"}


id: PR:O42929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A density-regulated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12789:SF0","OMA:SCHPO04088","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery-associated protein 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.05","secondary_identifiers":["UniProtKB:O42929"],"synonyms":[{"name":"Spom972h-DENR","type":"exact"},{"name":"density-regulated protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42929"}


id: GO:0102504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: luteolinidin + UDP-alpha-D-glucose = luteolinidin 5-O-glucoside + UDP + 2 H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"luteolinidin 5-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14424"],"termid":"GO:0102504"}


id: PBO:0053990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1309","termid":"PBO:0053990"}


id: PBO:0028312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_protein_coding_gene","termid":"PBO:0028312"}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["RESID:AA0350","Unimod:442#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: PR:Q4PIR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q4PIR3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 SUMO-protein ligase nse2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.06c","synonyms":[{"name":"Spom972h-nse2","type":"exact"},{"name":"non-SMC element 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-structural maintenance of chromosomes element 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q4PIR3"}


id: PBO:0090820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine 32-2'-O)-methyltransferase regulator Trm732","termid":"PBO:0090820"}


id: GO:0016134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin metabolic process","synonyms":[{"name":"saponin metabolism","type":"exact"}],"termid":"GO:0016134"}


id: PBO:0066725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 22","termid":"PBO:0066725"}


id: PBO:0085541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7A has a paralog, RPS7B, that arose from the whole genome duplication","termid":"PBO:0085541"}


id: PBO:0051641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1","termid":"PBO:0051641"}


id: GO:0044574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the starch utilization system complex, a complex of cell envelope-associated proteins that degrades glycan.","definition_xrefs":["GOC:tt","PMID:19553672","PMID:21219452","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"starch utilization system complex assembly","synonyms":[{"name":"SUS complex assembly","type":"exact"},{"name":"assembly of starch utilization system complex","type":"exact"}],"termid":"GO:0044574"}


id: MOD:00290
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-histidine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["PubMed:7854413","RESID:AA0285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(N3'-histidinoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00290"}


id: FYPO:0004019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"normal succinate cytochrome c oxidoreductase","type":"related"},{"name":"normal succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"}],"termid":"FYPO:0004019"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: FYPO:0007681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a RNA-DNA hybrid ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal RNA-DNA hybrid ribonuclease activity","termid":"FYPO:0007681"}


id: GO:0034854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,4-dimethyl-3-oxopentanoate + H+ = 3,3-dimethyl-2-butanone + CO2.","definition_xrefs":["UM-BBD_reactionID:r1280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4,4-dimethyl-3-oxopentanoate decarboxylase activity","termid":"GO:0034854"}


id: GO:0072598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a chloroplast.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chloroplast","synonyms":[{"name":"protein localisation to chloroplast","type":"exact"}],"termid":"GO:0072598"}


id: GO:0035857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an eosinophil cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:BHF","GOC:vk","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate specification","synonyms":[{"name":"eosinophil cell fate specification","type":"exact"}],"termid":"GO:0035857"}


id: GO:0042267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:pr","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated cytotoxicity","synonyms":[{"name":"NK cell mediated cell death","type":"exact"},{"name":"NK cell mediated cell killing","type":"exact"},{"name":"NK cell mediated cytolysis","type":"related"},{"name":"NK cell mediated cytotoxicity","type":"exact"},{"name":"killer activity","type":"related"},{"name":"natural killer cell mediated cell death","type":"exact"},{"name":"natural killer cell mediated cell killing","type":"exact"},{"name":"natural killer cell mediated cytolysis","type":"related"},{"name":"natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042267"}


id: GO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["PMID:6794030","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"pyochelin metabolic process","termid":"GO:0042863"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyochelin biosynthetic process","secondary_identifiers":["GO:0031187","GO:0031188"],"synonyms":[{"name":"pyochelin anabolism","type":"exact"},{"name":"pyochelin biosynthesis","type":"exact"},{"name":"pyochelin biosynthetic process, peptide formation","type":"narrow"},{"name":"pyochelin biosynthetic process, peptide modification","type":"narrow"},{"name":"pyochelin formation","type":"exact"},{"name":"pyochelin synthesis","type":"exact"}],"termid":"GO:0042864"}


id: PBO:0064500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit C pseudogene 1","termid":"PBO:0064500"}


id: GO:0099099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ion channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:35704701","GOC:dos","Wikipedia:G_protein-gated_ion_channel"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"G-protein gated monoatomic ion channel activity","synonyms":[{"name":"G-protein gated ion channel activity","type":"broad"}],"termid":"GO:0099099"}


id: PBO:0059571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1 pseudogene 3","termid":"PBO:0059571"}


id: GO:0009548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a plasmodesma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasmodesmatal plasma membrane","termid":"GO:0009548"}


id: PBO:0069228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 483, pseudogene","termid":"PBO:0069228"}


id: PBO:0076758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymine-DNA glycosylase pseudogene 1","termid":"PBO:0076758"}


id: PBO:0048975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 4","termid":"PBO:0048975"}


id: PBO:0078433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-3","termid":"PBO:0078433"}


id: PBO:0060997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 2","termid":"PBO:0060997"}


id: GO:0140849
data:
  {"annotated_genes":["SJAG_02798","SJAG_02571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84216,94417],"is_not":false,"summary":null,"term":"GO:0140849"}]},"cv_name":"molecular_function","definition":"A histone chaperone that mediates the exchange of histone H2A-H2B dimer and histone H2AZ-H2B dimers in a nucleosome, driven by ATP hydrolysis. Some chaperones insert H2AZ-H2B dimers and remove H2A-H2B, while others do the opposite.","definition_xrefs":["PMID:21241891","PMID:30309918","PMID:23580526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent histone chaperone activity","termid":"GO:0140674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02571":null,"SJAG_02798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0140104","GO:0003824","GO:0140597","GO:0140097"],"is_obsolete":false,"name":"ATP-dependent H2AZ histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent H2A.Z histone chaperone activity","type":"exact"},{"name":"H2AZ histone exchange activity","type":"related"}],"termid":"GO:0140849","terms_by_termid":{"GO:0140849":null}}


id: PBO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit alpha","termid":"PBO:0048191"}


id: PBO:0056273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1B member 1","termid":"PBO:0056273"}


id: PBO:0064678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 14","termid":"PBO:0064678"}


id: PBO:0076331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYS1-DBNDD2 readthrough (NMD candidate)","termid":"PBO:0076331"}


id: GO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a recycling endosome.","definition_xrefs":["PMID:10930469","GOC:rph","PMID:16246101","GOC:jid","PMID:15601896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"recycling endosome membrane","termid":"GO:0055038"}


id: PBO:0043900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC repeat containing interactor of PDZ3 domain","termid":"PBO:0043900"}


id: PBO:0081880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 827","termid":"PBO:0081880"}


id: GO:0050044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose 6-phosphate = D-tagatose 6-phosphate.","definition_xrefs":["EC:5.3.1.26","RHEA:13033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactose-6-phosphate isomerase activity","secondary_identifiers":["KEGG_REACTION:R03240","MetaCyc:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN"],"synonyms":[{"name":"D-galactose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-galactose-6-phosphate ketol-isomerase activity","type":"related"}],"termid":"GO:0050044"}


id: PBO:0018008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein, UBR ubiquitin-protein ligase E3 Ubr1","termid":"PBO:0018008"}


id: SO:0000889
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is paternally imprinted.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paternally_imprinted","termid":"SO:0000136"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted_gene","synonyms":[{"name":"paternally imprinted gene","type":"exact"}],"termid":"SO:0000889"}


id: FYPO:0007336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abolished chromatin silencing at silent mating-type cassette","synonyms":[{"name":"abolished chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"abolished chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"chromatin silencing at silent mating-type cassette abolished","type":"exact"}],"termid":"FYPO:0007336"}


id: GO:0043855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide-activated monoatomic ion channel activity","synonyms":[{"name":"cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"cyclic nucleotide-gated ion channel activity","type":"broad"},{"name":"cyclic nucleotide-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0043855"}


id: PBO:0039080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylglycerone phosphate synthase","termid":"PBO:0039080"}


id: PBO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 1","termid":"PBO:0044218"}


id: PBO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAS1 related extracellular matrix 2","termid":"PBO:0047969"}


id: GO:0018614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylbenzene + O2 + NADH + H+ = NAD+ + cis-2,3-dihydroxy-2,3-dihydroethylbenzene.","definition_xrefs":["UM-BBD_reactionID:r0247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ethylbenzene dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018614"}


id: PBO:0092008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit (15S) rRNA, rns","termid":"PBO:0092008"}


id: GO:0140368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that recognizes, binds and sequesters a specific receptor ligand to prevent it from binding to its regular receptor. May be soluble or membrane bound.","definition_xrefs":["PMID:30621730","GOC:bhm","PMID:9168977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"decoy receptor complex","synonyms":[{"name":"osteoclastogenesis inhibitory factor","type":"narrow"},{"name":"osteoprotegerin complex","type":"narrow"}],"termid":"GO:0140368"}


id: GO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-10 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-10 receptor binding","synonyms":[{"name":"IL-10","type":"narrow"},{"name":"interleukin-10 receptor ligand","type":"narrow"}],"termid":"GO:0005141"}


id: GO:0016356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus susceptibility/resistance (obsolete GO:0016356)","synonyms":[{"name":"organophosphorus susceptibility/resistance","type":"exact"}],"termid":"GO:0016356"}


id: FYPO:0000792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glycerol dehydrogenase activity","termid":"FYPO:0000792"}


id: PBO:0086192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to nucleases that forms a complex with Pbp1p; complex may mediate posttranscriptional regulation of HO; involved in propagation of M2 dsRNA satellite of L-A virus; allelic variation affects mitochondrial genome stability, drug resistance, and more; forms cytoplasmic foci upon DNA replication stress; localization to P-bodies under ethanol stress differs between strains","termid":"PBO:0086192"}


id: GO:0043385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mycotoxin metabolic process","synonyms":[{"name":"mycotoxin metabolism","type":"exact"}],"termid":"GO:0043385"}


id: GO:1900543
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685","SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75078,72033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[107550,111636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_02380":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of purine metabolic process","type":"narrow"},{"name":"down regulation of purine metabolism","type":"narrow"},{"name":"down regulation of purine nucleotide metabolic process","type":"exact"},{"name":"down regulation of purine nucleotide metabolism","type":"exact"},{"name":"down-regulation of purine metabolic process","type":"narrow"},{"name":"down-regulation of purine metabolism","type":"narrow"},{"name":"down-regulation of purine nucleotide metabolic process","type":"exact"},{"name":"down-regulation of purine nucleotide metabolism","type":"exact"},{"name":"downregulation of purine metabolic process","type":"narrow"},{"name":"downregulation of purine metabolism","type":"narrow"},{"name":"downregulation of purine nucleotide metabolic process","type":"exact"},{"name":"downregulation of purine nucleotide metabolism","type":"exact"},{"name":"inhibition of purine metabolic process","type":"narrow"},{"name":"inhibition of purine metabolism","type":"narrow"},{"name":"inhibition of purine nucleotide metabolic process","type":"narrow"},{"name":"inhibition of purine nucleotide metabolism","type":"narrow"},{"name":"negative regulation of purine metabolic process","type":"narrow"},{"name":"negative regulation of purine metabolism","type":"narrow"},{"name":"negative regulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900543","terms_by_termid":{"GO:0045820":null,"GO:2001211":null}}


id: PBO:0089647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein","termid":"PBO:0089647"}


id: GO:0070892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoteichoic acid and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:14665680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipoteichoic acid immune receptor activity","synonyms":[{"name":"lipoteichoic acid receptor activity","type":"broad"}],"termid":"GO:0070892"}


id: PBO:0055300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2727","termid":"PBO:0055300"}


id: PBO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPADILINO syndrome","termid":"PBO:0002375"}


id: GO:0051954
data:
  {"annotated_genes":["SJAG_05346","SJAG_02605","SJAG_03591","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89506,106725,87920,95047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[95048,89507,87921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"positively_regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amine transport","type":"narrow"},{"name":"stimulation of amine transport","type":"narrow"},{"name":"up regulation of amine transport","type":"exact"},{"name":"up-regulation of amine transport","type":"exact"},{"name":"upregulation of amine transport","type":"exact"}],"termid":"GO:0051954","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:1902410
data:
  {"annotated_genes":["SJAG_04982","SJAG_03025","SJAG_04776","SJAG_00700","SJAG_04077","SJAG_01114","SJAG_03048","SJAG_02392","SJAG_02838","SJAG_01805","SJAG_03915","SJAG_04703","SJAG_01665","SJAG_03123","SJAG_00279","SJAG_00514","SJAG_02916","SJAG_03309","SJAG_03342","SJAG_04597","SJAG_02592","SJAG_01943","SJAG_03631","SJAG_03379","SJAG_03596","SJAG_00845","SJAG_02431","SJAG_01894","SJAG_04690","SJAG_01453","SJAG_05290","SJAG_03045","SJAG_00228","SJAG_01215","SJAG_00442","SJAG_00268","SJAG_03581","SJAG_02700","SJAG_00807","SJAG_03703","SJAG_00938","SJAG_05179","SJAG_01188","SJAG_04468","SJAG_03704","SJAG_04498","SJAG_04358","SJAG_04666","SJAG_00082","SJAG_01732","SJAG_03936","SJAG_02380","SJAG_00256","SJAG_05285","SJAG_02222","SJAG_04930","SJAG_04887","SJAG_02215","SJAG_01889","SJAG_01143","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95924,87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"},{"annotations":[114587,97429,88509,115346,98734,114010,108053,94210,108487,93902,113188,104316,73881,93826,84490,95068,98594,114766,88723,94099,91466,88769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94211],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98595,97097,94212,114011,91467,95069,96865,84491,93827,108488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[92496,106949,105036,115671,84505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[102290,104798,102274,109264,95454,98812,103219,97098,100833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[98539],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[99875],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[98544],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[86207,90589],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[90757,109547,83767,90590,106708],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[106951,99878,86970,115672,92035],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[114023,88602,109548,102550,101344,89989,103221,85453,86076,111627],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[83768,88603,90593],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[102275,110555],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031671"},{"annotations":[89995,90555,115502],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[84090,107554,97552],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[114024],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111983],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"Any cytokinetic process that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic 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cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:1902410","terms_by_termid":{"GO:0031671":null,"GO:0061796":null,"GO:0120306":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PBO:0068751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 6, pseudogene","termid":"PBO:0068751"}


id: GO:0009129
data:
  {"annotated_genes":["SJAG_03708","SJAG_00444","SJAG_00964","SJAG_00197","SJAG_00694","SJAG_04627","SJAG_04354","SJAG_04713","SJAG_03164","SJAG_04487","SJAG_04709","SJAG_00533","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112884,94674,89598,85660,108096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[66980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[104559,85588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[95156,104560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[111081,88151,84681,83698,89145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine nucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009129","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: GO:1990401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the lung over time, from its formation to the mature structure.","definition_xrefs":["PMID:24785085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic lung development","termid":"GO:1990401"}


id: PBO:0062896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 2","termid":"PBO:0062896"}


id: PBO:0044918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 2","termid":"PBO:0044918"}


id: PBO:0079265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC36 and KMT2A antisense RNA 1","termid":"PBO:0079265"}


id: GO:1902145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cell cycle checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cell cycle checkpoint signaling","synonyms":[{"name":"regulation of G1/S transition checkpoint effector process","type":"related"},{"name":"regulation of G2/M transition checkpoint effector process","type":"related"},{"name":"regulation of cell cycle checkpoint effector process","type":"exact"},{"name":"regulation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"regulation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"regulation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"regulation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"regulation of response to signal involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:1902145"}


id: PBO:0085473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology and sporulation; homolog of the human protein Dullard","termid":"PBO:0085473"}


id: GO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["GOC:jh","GOC:tb","PMID:12810699","PMID:15923184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"}


id: GO:0014724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"regulates","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"}


id: PBO:0058830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8060","termid":"PBO:0058830"}


id: GO:0021922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of a cell in the dorsal spinal cord that affects the rate of its division.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","PMID:12593981","GOC:dph","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in regulation of cell proliferation in dorsal spinal cord (obsolete GO:0021922)","synonyms":[{"name":"Wnt receptor signaling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"Wnt receptor signalling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"Wnt-activated signaling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"}],"termid":"GO:0021922"}


id: PBO:0071491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 32","termid":"PBO:0071491"}


id: PBO:0054981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2395","termid":"PBO:0054981"}


id: PBO:0046048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 1","termid":"PBO:0046048"}


id: PBO:0004840
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinase deficiency","termid":"PBO:0004840"}


id: PBO:0079100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSSK6 activating cochaperone","termid":"PBO:0079100"}


id: GO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of recombination within rDNA repeats (obsolete GO:0000020)","synonyms":[{"name":"negative regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0000020"}


id: PBO:0082757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate with other rods to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082757"}


id: PR:Q9Y827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.05c","synonyms":[{"name":"Spom972h-ptl3","type":"exact"}],"termid":"PR:Q9Y827"}


id: PBO:0075815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 4 domains","termid":"PBO:0075815"}


id: GO:0016289
data:
  {"annotated_genes":["SJAG_02769","SJAG_04007","SJAG_02985","SJAG_04895","SJAG_01396","SJAG_00902"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87625,75652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003986"},{"annotations":[92997,97811,103651,104897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-CoA + H2O = a carboxylate + CoA + H+.","definition_xrefs":["RHEA:70423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00902":null,"SJAG_01396":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_04007":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.2.10","RHEA:19741","KEGG_REACTION:R00521","MetaCyc:FORMYL-COA-HYDROLASE-RXN","Reactome:R-HSA-193385"],"synonyms":[{"name":"CoA hydrolase activity","type":"broad"}],"termid":"GO:0016289","terms_by_termid":{"GO:0003986":null,"GO:0047617":null}}


id: PBO:0069386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 646, pseudogene","termid":"PBO:0069386"}


id: GO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071181"}


id: MOD:01240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of leucyl-arginyl-glycyl-glycine, the C-terminal tetrapeptide of ubiquitin.","definition_xrefs":["PubMed:10504701","Unimod:535"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"ubiquitination signature tetrapeptidyl lysine","synonyms":[{"name":"LeuArgGlyGly","type":"related"},{"name":"Ubiquitination","type":"related"}],"termid":"MOD:01240"}


id: FYPO:0003051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PMID:24173580","PMID:22582262","PMID:23117617","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing","termid":"FYPO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003051"}


id: PBO:0067815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 117","termid":"PBO:0067815"}


id: GO:1990612
data:
  {"annotated_genes":["SJAG_05196","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92894,98989],"is_not":false,"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair.","definition_xrefs":["GOC:vw","PMID:24943839","PMID:24947240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane microtubule tethering complex","termid":"GO:0034993"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Sad1-Kms1 LINC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990612","terms_by_termid":{"GO:1990612":null}}


id: PBO:0042840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP44 antisense RNA 1","termid":"PBO:0042840"}


id: GO:1903599
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67999],"is_not":false,"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GOC:TermGenie","GOC:autophagy","GOC:pad","GOC:PARL","GO_REF:0000058","PMID:21753002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914","GO:0007005"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of mitochondrion degradation","type":"related"},{"name":"activation of mitophagy","type":"narrow"},{"name":"positive regulation of mitochondrial degradation","type":"broad"},{"name":"up regulation of mitochondrion degradation","type":"broad"},{"name":"up regulation of mitophagy","type":"exact"},{"name":"up-regulation of mitochondrion degradation","type":"broad"},{"name":"up-regulation of mitophagy","type":"exact"},{"name":"upregulation of mitochondrion degradation","type":"broad"},{"name":"upregulation of mitophagy","type":"exact"}],"termid":"GO:1903599","terms_by_termid":{"GO:1903599":null}}


id: PBO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 2","termid":"PBO:0048290"}


id: GO:0009172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate catabolic process","termid":"GO:0009128"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009159"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009172"}


id: PBO:0059464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 3","termid":"PBO:0059464"}


id: PBO:0005729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf19","termid":"PBO:0005729"}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: PBO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 3","termid":"PBO:0047712"}


id: PBO:0045859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 49","termid":"PBO:0045859"}


id: PBO:0083118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor; required for pre-replication complex assembly","termid":"PBO:0083118"}


id: FYPO:0006738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of beta-hibitakanine. Normally, wild-type cell populations survive longer in the presence of beta-hibitakanine than in its absence.","definition_xrefs":["PMID:29900664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by beta-hibitakanine","synonyms":[{"name":"chronological lifespan unaffected by beta-hibitakanine","type":"related"},{"name":"loss of chronological lifespan extension by beta-hibitakanine","type":"related"},{"name":"loss of stationary phase viability extension in presence of beta-hibitakanine","type":"exact"}],"termid":"FYPO:0006738"}


id: GO:1990671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi medial cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:16038056","GOC:bhm","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with Golgi medial cisterna membrane","termid":"GO:1990671"}


id: PBO:0031847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Golgi_morphology","termid":"PBO:0031847"}


id: PBO:0083986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine tRNA synthetase; monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Gln); N-terminal domain proposed to be involved in enzyme-tRNA interactions","termid":"PBO:0083986"}


id: FYPO:0007064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any 22S rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PMID:29641590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rRNA precursor level","termid":"FYPO:0003600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased 22S rRNA precursor level","synonyms":[{"name":"increased 22S rRNA precursor accumulation","type":"related"},{"name":"increased 22S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased 22S rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased 22S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0007064"}


id: _global:variant_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A' is a variant (mutation) of A = definition every instance of A' is either an immediate mutation of some instance of A, or there is a chain of immediate mutation processes linking A' to some instance of A.","definition_xrefs":["SO:immuno_workshop"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_of","termid":"_global:variant_of"}


id: PBO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton regulator RNA","termid":"PBO:0044511"}


id: PBO:0068635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 15, pseudogene","termid":"PBO:0068635"}


id: PBO:0085244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the ER; catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; transcriptionally induced in response to unfolded proteins in the ER; CPR5 has a paralog, CPR2, that arose from the whole genome duplication","termid":"PBO:0085244"}


id: PR:O14267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.12c gene.","definition_xrefs":["UniProtKB:O14267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C7D4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.12c","synonyms":[{"name":"Spom972h-SPAC7D4.12c","type":"exact"}],"termid":"PR:O14267"}


id: PR:Q10264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pso2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair protein pso2/snm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.01c","synonyms":[{"name":"Spom972h-pso2","type":"exact"}],"termid":"PR:Q10264"}


id: GO:0036183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"asperthecin catabolic process","synonyms":[{"name":"asperthecin breakdown","type":"exact"},{"name":"asperthecin catabolism","type":"exact"},{"name":"asperthecin degradation","type":"exact"}],"termid":"GO:0036183"}


id: GO:1904973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral translation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19666601","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of viral translation","termid":"GO:1904971"},{"relation_name":"positively_regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral translation","synonyms":[{"name":"activation of viral protein anabolism","type":"narrow"},{"name":"activation of viral protein biosynthesis","type":"narrow"},{"name":"activation of viral protein biosynthetic process","type":"narrow"},{"name":"activation of viral protein formation","type":"narrow"},{"name":"activation of viral protein synthesis","type":"narrow"},{"name":"activation of viral translation","type":"narrow"},{"name":"positive regulation of viral protein anabolism","type":"exact"},{"name":"positive regulation of viral protein biosynthesis","type":"exact"},{"name":"positive regulation of viral protein biosynthetic process","type":"exact"},{"name":"positive regulation of viral protein formation","type":"exact"},{"name":"positive regulation of viral protein synthesis","type":"exact"},{"name":"up regulation of viral protein anabolism","type":"exact"},{"name":"up regulation of viral protein biosynthesis","type":"exact"},{"name":"up regulation of viral protein biosynthetic process","type":"exact"},{"name":"up regulation of viral protein formation","type":"exact"},{"name":"up regulation of viral protein synthesis","type":"exact"},{"name":"up regulation of viral translation","type":"exact"},{"name":"up-regulation of viral protein anabolism","type":"exact"},{"name":"up-regulation of viral protein biosynthesis","type":"exact"},{"name":"up-regulation of viral protein biosynthetic process","type":"exact"},{"name":"up-regulation of viral protein formation","type":"exact"},{"name":"up-regulation of viral protein synthesis","type":"exact"},{"name":"up-regulation of viral translation","type":"exact"},{"name":"upregulation of viral protein anabolism","type":"exact"},{"name":"upregulation of viral protein biosynthesis","type":"exact"},{"name":"upregulation of viral protein biosynthetic process","type":"exact"},{"name":"upregulation of viral protein formation","type":"exact"},{"name":"upregulation of viral protein synthesis","type":"exact"},{"name":"upregulation of viral translation","type":"exact"}],"termid":"GO:1904973"}


id: PR:O13987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and IPT/TIG repeat-containing protein C26H5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.05","synonyms":[{"name":"Spom972h-mga2","type":"exact"}],"termid":"PR:O13987"}


id: PBO:0060665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDC1 transmembrane nucleoporin","termid":"PBO:0060665"}


id: GO:0075202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont penetration hypha formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"regulates","term_name":"penetration hypha formation","termid":"GO:0075201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of penetration hypha formation","synonyms":[{"name":"modulation of symbiont penetration hypha formation for entry into host","type":"exact"}],"termid":"GO:0075202"}


id: PBO:0000677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Puf3 (predicted)","termid":"PBO:0000677"}


id: PBO:0064429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 6","termid":"PBO:0064429"}


id: PATO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased temperature","secondary_identifiers":["PATO:0000678"],"synonyms":[{"name":"high temperature","type":"exact"},{"name":"hot","type":"exact"}],"termid":"PATO:0001305"}


id: PBO:0066057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 2","termid":"PBO:0066057"}


id: GO:0061919
data:
  {"annotated_genes":["SJAG_03345","SJAG_05346","SJAG_04496","SJAG_01876","SJAG_02414","SJAG_04232","SJAG_00114","SJAG_00457","SJAG_01184","SJAG_01135","SJAG_02315","SJAG_01467","SJAG_00059","SJAG_01415","SJAG_01080","SJAG_01382","SJAG_00763","SJAG_04249","SJAG_00380","SJAG_01722","SJAG_02539","SJAG_00004","SJAG_01251","SJAG_04294","SJAG_00820","SJAG_04759","SJAG_02100","SJAG_01783","SJAG_04991","SJAG_04963","SJAG_04837","SJAG_02655","SJAG_04860","SJAG_04023","SJAG_02433","SJAG_00824","SJAG_00704","SJAG_02663","SJAG_03371","SJAG_02441","SJAG_05261","SJAG_00284","SJAG_02525","SJAG_03435","SJAG_02723","SJAG_00355","SJAG_01509","SJAG_05245","SJAG_00053","SJAG_03467","SJAG_00724","SJAG_03718","SJAG_01283","SJAG_03442","SJAG_06309","SJAG_01274","SJAG_00645","SJAG_01561","SJAG_03851","SJAG_00029","SJAG_04021","SJAG_04219","SJAG_05000","SJAG_04435","SJAG_05017","SJAG_05289","SJAG_00850","SJAG_03464","SJAG_04502","SJAG_04655","SJAG_03170","SJAG_03136","SJAG_00115","SJAG_02640","SJAG_02699","SJAG_02765","SJAG_01716","SJAG_05210","SJAG_00169","SJAG_03100","SJAG_05184","SJAG_04552","SJAG_02432","SJAG_00732"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[71691,88805,113946,94051,89087,90989,99763,92817,110022,84067,93766,96137,100773,90803,87796,107869,109830,105958],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[85472,86289,109831],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[90804],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[113055,103807,104742,85821,85315,90494,88299,93810,91697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006914"},{"annotations":[104831,109832,107870,93781,105959,98675,99764,94779,91624,86290,96444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[93767,96445,84068,93782,96138,94780,104832,98299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030242"},{"annotations":[105960,104833,86291,93783,94781,96446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[84069,90990,94052,99765,105614,107871,86292,93769,105961,97287,104835,109833,87797,90103,96447,101130,94782,104745,96139,107696,106849,98703,93494,113947,90806,106461,101062,88807,89088,89712,105996,106016,93784,111326,84893,95279,99915,98301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016236"},{"annotations":[110686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016237"},{"annotations":[100998,106850,111388,91145,90807,96140,113948,85261,84070,87798,89089,94053,95861,88808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[105448,114486],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010507"},{"annotations":[102823],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[96448,93785,104746,94783,95565,105962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[84071,86293,87799,100999,71690,90424,95862,96141,113949,107872,90107,94054,99766,112389,104388,104836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[104747,104837],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[93799],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[103577,107140,95609,108026,105867,95046,110749,90351],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010508"},{"annotations":[67999],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[94185,102428],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[85724],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[86294],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061739"},{"annotations":[67788,94735,71686,113950],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010506"},{"annotations":[112762,113951,95566,111389,104838,100546,96142,104748,71683,99767,95864,101001,86616,106851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[109730,96143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:21997368","PMID:28596378","PMID:22966490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":84,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00169":null,"SJAG_00284":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00645":null,"SJAG_00704":null,"SJAG_00724":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00824":null,"SJAG_00850":null,"SJAG_01080":null,"SJAG_01135":null,"SJAG_01184":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01509":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02315":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02663":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03371":null,"SJAG_03435":null,"SJAG_03442":null,"SJAG_03464":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_05346":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"process utilizing autophagic mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0061919","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0006914":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016236":null,"GO:0016237":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0030242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0061739":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: GO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a iC3b product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"complement component iC3b binding","termid":"GO:0001852"}


id: PR:O14320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa1 gene.","definition_xrefs":["UniProtKB:O14320","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.03c","synonyms":[{"name":"Spom972h-coa1","type":"exact"}],"termid":"PR:O14320"}


id: PBO:0027329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins","termid":"PBO:0027329"}


id: GO:1900357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nigerotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"nigerotriose transport","termid":"GO:2001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nigerotriose transport","termid":"GO:1900357"}


id: PBO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_of_cell_population_growth","termid":"PBO:0030382"}


id: PBO:0054585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1988","termid":"PBO:0054585"}


id: GO:2000236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"negatively_regulates","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tRNA processing","synonyms":[{"name":"negative regulation of tRNA maturation","type":"exact"}],"termid":"GO:2000236"}


id: GO:0106411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'XMP + H20 = phosphate + xanthosine.","definition_xrefs":["PMID:34824243","RHEA:28530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"XMP 5'-nucleosidase activity","secondary_identifiers":["EC:3.1.3.5","MetaCyc:XMPXAN-RXN"],"termid":"GO:0106411"}


id: GO:1904787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["GO_REF:0000058","PMID:17476329","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of asymmetric protein localization involved in cell fate determination","termid":"GO:1904785"},{"relation_name":"positively_regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"activation of asymmetric protein localisation involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate commitment","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization resulting in cell fate commitment","type":"narrow"},{"name":"activation of cell fate commitment, asymmetric protein localization","type":"narrow"},{"name":"positive regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"positive regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"positive regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"positive regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up-regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up-regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"upregulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"upregulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904787"}


id: PBO:0087374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssDNA-binding protein essential for mitochondrial genome maintenance; involved in mitochondrial DNA replication; stimulates utilization by Mip1p DNA polymerase of RNA primers synthesized by Rpo41p","termid":"PBO:0087374"}


id: PBO:0052859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-2","termid":"PBO:0052859"}


id: GO:1900492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:pr","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"down regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"down-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"downregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"inhibition of 4Fe-4S cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"negative regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"negative regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900492"}


id: GO:0015773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of raffinose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Raffinose occurs in plants almost as commonly as sucrose and is present in cereal grains, cotton seeds, and many legumes. It is synthesized from sucrose by transfer of a galactopyranoside from myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"raffinose transport","termid":"GO:0015773"}


id: GO:1901259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any rRNA processing that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chloroplast rRNA processing","termid":"GO:1901259"}


id: GO:1903108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription occuring in the mitochondrion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21357609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"regulation of mitochondrial gene expression","termid":"GO:0062125"},{"relation_name":"regulates","term_name":"mitochondrial transcription","termid":"GO:0006390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0140053","GO:0006355"],"is_obsolete":false,"name":"regulation of mitochondrial transcription","synonyms":[{"name":"regulation of transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:1903108"}


id: PBO:0040352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 1","termid":"PBO:0040352"}


id: GO:0051369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The decanoylation of peptidyl-threonine to form peptidyl-O3-decanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["PMID:11546772","RESID:AA0387","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"},{"relation_name":"is_a","term_name":"protein decanoylation","termid":"GO:0051366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"peptidyl-threonine decanoylation","termid":"GO:0051369"}


id: GO:0035861
data:
  {"annotated_genes":["SJAG_02575","SJAG_02294","SJAG_03906","SJAG_01708","SJAG_00640","SJAG_01419","SJAG_04142","SJAG_03680","SJAG_03780","SJAG_01677","SJAG_02460","SJAG_05295","SJAG_02098","SJAG_02079","SJAG_01644","SJAG_05196","SJAG_04239","SJAG_03941","SJAG_04183","SJAG_02990","SJAG_05012","SJAG_04816","SJAG_03722","SJAG_01573","SJAG_05373","SJAG_02521","SJAG_01410","SJAG_05232","SJAG_02616","SJAG_04190","SJAG_01429","SJAG_02072","SJAG_00727","SJAG_00399","SJAG_01698","SJAG_04791","SJAG_01832","SJAG_01849","SJAG_05239","SJAG_01486","SJAG_01680","SJAG_00757","SJAG_02828","SJAG_03898","SJAG_01533","SJAG_02708","SJAG_00250","SJAG_02200","SJAG_03454","SJAG_03026","SJAG_01205","SJAG_05372","SJAG_01648","SJAG_03855","SJAG_02771","SJAG_03923","SJAG_01076","SJAG_03615","SJAG_02545","SJAG_01605"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70767,84767,84858,85373,85500,85798,86411,86492,87064,87610,87713,88708,88854,89840,90124,92190,92347,92695,92862,93094,93302,93336,93604,95129,95223,95353,96740,96769,96803,97215,98990,99069,99130,99501,100157,100229,100324,100394,100587,103839,103930,103973,105502,107003,107395,107683,107726,107903,108697,110430,110454,111679,112416,112679,112958,113344,113438,113721,113850,114834],"is_not":false,"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["PMID:20096808","GOC:mah","GOC:vw","PMID:21035408","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of DNA damage","termid":"GO:0090734"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"site of double-strand break","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage foci","type":"related"},{"name":"DNA damage focus","type":"related"},{"name":"IRIF","type":"related"},{"name":"ionizing radiation-induced foci","type":"related"},{"name":"site of DSB","type":"exact"}],"termid":"GO:0035861","terms_by_termid":{"GO:0035861":null}}


id: PBO:0047087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member F, pseudogene","termid":"PBO:0047087"}


id: PBO:0005559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit (predicted)","termid":"PBO:0005559"}


id: PBO:0024805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables","termid":"PBO:0024805"}


id: PATO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located in a position equidistant from edges.","definition_xrefs":["PATOC:OREGON"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centered","termid":"PATO:0002268"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: FYPO:0005059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break resection is decreased. Meiotic DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["PomBase:mah","GO:1990899","PMID:26130711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000293","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic DNA double-strand break resection","synonyms":[{"name":"decreased meiotic DNA double-strand break resectioning","type":"exact"},{"name":"reduced meiotic DNA double-strand break resection","type":"exact"}],"termid":"FYPO:0005059"}


id: PBO:0068150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 457","termid":"PBO:0068150"}


id: GO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 22 (CCL22) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:18832724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 22 production","synonyms":[{"name":"C-C motif chemokine 22 production","type":"exact"},{"name":"CCL-22 production","type":"exact"},{"name":"CCL22 production","type":"exact"}],"termid":"GO:0071924"}


id: PBO:0090051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12","termid":"PBO:0090051"}


id: PBO:0027415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027415"}


id: GO:0036049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a succinyl group (CO-CH2-CH2-CO) from a succinylated lysine residue in a peptide or protein.","definition_xrefs":["PMID:22076378","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein desuccinylation","termid":"GO:0036048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine desuccinylation","termid":"GO:0036049"}


id: PBO:0059087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 1","termid":"PBO:0059087"}


id: PBO:0030012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_salt_stress","termid":"PBO:0030012"}


id: GO:0018309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a linkage between a protein amino acid and flavin mononucleotide (FMN).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage (obsolete GO:0018309)","termid":"GO:0018309"}


id: GO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular metabolic process in which a cell duplicates one or more molecules of RNA.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA replication","termid":"GO:0039703"}


id: PBO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 pseudogene 1","termid":"PBO:0061262"}


id: PBO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 2","termid":"PBO:0070408"}


id: PBO:0029243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_caffeine","termid":"PBO:0029243"}


id: PBO:0062686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 7","termid":"PBO:0062686"}


id: PBO:0080153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"versican","termid":"PBO:0080153"}


id: PBO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc4","termid":"PBO:0003303"}


id: PBO:0000878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family protein Yip12","termid":"PBO:0000878"}


id: PBO:0047040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member A","termid":"PBO:0047040"}


id: PBO:0055082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2500","termid":"PBO:0055082"}


id: PBO:0017586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0017586"}


id: PBO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme","termid":"PBO:0000379"}


id: PBO:0059673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 39","termid":"PBO:0059673"}


id: PBO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.7","termid":"PBO:0002359"}


id: PBO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 7","termid":"PBO:0071384"}


id: PBO:0081822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 740","termid":"PBO:0081822"}


id: PBO:0078475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRHDE antisense RNA 1","termid":"PBO:0078475"}


id: PBO:0063660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 1","termid":"PBO:0063660"}


id: PBO:0082527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall adhesin, expressed specifically during mating; may be involved in maintenance of cell wall integrity during mating; FIG2 has a paralog, AGA1, that arose from the whole genome duplication","termid":"PBO:0082527"}


id: GO:0072526
data:
  {"annotated_genes":["SJAG_02135","SJAG_04048","SJAG_00605","SJAG_03091","SJAG_01543","SJAG_03660","SJAG_04192","SJAG_00461","SJAG_04495","SJAG_06621","SJAG_03373","SJAG_03903","SJAG_00839","SJAG_02107","SJAG_03852","SJAG_02369","SJAG_00685","SJAG_05314","SJAG_00633","SJAG_00027","SJAG_02796","SJAG_03828","SJAG_01310","SJAG_04334","SJAG_06622","SJAG_02945","SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105111,90701,101622,105115,105110,105579,105581,101988,99819,94173,94445,101623,105116,105583,112518,105578,105582,105584,100631,99560,105112,105114,105580,91191,101989,105113,101624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107756,94362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[101278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[101280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[72033,75078],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[97037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01543":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine and derivative catabolic process","type":"exact"},{"name":"pyridine-containing compound breakdown","type":"exact"},{"name":"pyridine-containing compound catabolism","type":"exact"},{"name":"pyridine-containing compound degradation","type":"exact"}],"termid":"GO:0072526","terms_by_termid":{"GO:0006096":null,"GO:0006742":null,"GO:0019677":null,"GO:0042820":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:0052442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052442)","synonyms":[{"name":"modulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"},{"name":"modulation of defense-related symbiont JA-mediated signal transduction pathway by organism","type":"exact"}],"termid":"GO:0052442"}


id: GO:0102351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-aminobutyric acid + 2-oxo monocarboxylic acid anion = 4-oxobutanoate + glycine.","definition_xrefs":["GOC:pz","EC:2.6.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gamma-aminobutyrate transaminase (glyoxylate dependent) activity","secondary_identifiers":["MetaCyc:RXN-13328","RHEA:32267"],"termid":"GO:0102351"}


id: PBO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X3-C motif chemokine ligand 1","termid":"PBO:0044256"}


id: PBO:0049195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRID1 antisense RNA 1","termid":"PBO:0049195"}


id: PBO:0076608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D26 antisense RNA 1","termid":"PBO:0076608"}


id: PR:O13914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alanine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00887","PANTHER:PTHR11777:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.09","secondary_identifiers":["UniProtKB:O13914"],"synonyms":[{"name":"AlaRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AARS","type":"exact"},{"name":"alanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13914"}


id: MOD:02051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-lysine residue","synonyms":[{"name":"XlnkLys","type":"exact"}],"termid":"MOD:02051"}


id: PBO:0052135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 2","termid":"PBO:0052135"}


id: PR:P87167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.02","synonyms":[{"name":"Spom972h-but2","type":"exact"}],"termid":"PR:P87167"}


id: PR:O42921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase assembly factor 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein pet191 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.16","secondary_identifiers":["UniProtKB:O42921"],"synonyms":[{"name":"Spom972h-COA5","type":"exact"}],"termid":"PR:O42921"}


id: FYPO:0006662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during G0 phase in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during G0","termid":"FYPO:0006667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"fragmented nucleus during G0","synonyms":[{"name":"degraded nucleus during cell quiescence","type":"related"},{"name":"fragmented nuclear DNA during G0","type":"related"},{"name":"fragmented nucleus during cell quiescence","type":"exact"},{"name":"fragmented nucleus during quiescence","type":"exact"},{"name":"loss of nuclear integrity during G0","type":"related"}],"termid":"FYPO:0006662"}


id: GO:0033003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell activation","termid":"GO:0033003"}


id: GO:0008532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R.","definition_xrefs":["EC:2.4.1.149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2025724","MetaCyc:2.4.1.149-RXN","RHEA:14389"],"synonyms":[{"name":"GnTE activity","type":"related"},{"name":"N-acetyllactosamine beta(1,3)N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-GlcNAc:GalR, beta-D-3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-GlcNAc:Galbeta-(1,4)-GlcNAcbeta-r-beta-(1,3)-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-GlcNAc:Galbeta-1,4-GlcNAcbeta-beta-1,3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:beta-D-galactosyl-1,4-N-acetyl-D-glucosamine beta-1,3-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"galbeta1->4GlcNAc-R beta1->3 N-acetylglucosaminyltransferase activity","type":"related"},{"name":"poly-N-acetyllactosamine extension enzyme activity","type":"broad"},{"name":"uridine diphosphoacetylglucosamine-acetyllactosaminide beta-1,3-acetylglucosaminyltransferase","type":"broad"},{"name":"uridine diphosphoacetylglucosamine-acetyllactosaminide beta1->3-acetylglucosaminyltransferase","type":"broad"}],"termid":"GO:0008532"}


id: GO:0090301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"},{"relation_name":"is_a","term_name":"regulation of neural crest formation","termid":"GO:0090299"},{"relation_name":"negatively_regulates","term_name":"neural crest formation","termid":"GO:0014029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest formation","termid":"GO:0090301"}


id: GO:0005635
data:
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id: GO:0009762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NADP-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"NADP-malic enzyme C4 photosynthesis","secondary_identifiers":["MetaCyc:PWY-241"],"termid":"GO:0009762"}


id: PATO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being situated at right angles to the horizon.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertical","termid":"PATO:0001854"}


id: PBO:0088933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12/MIND complex Mis14/Nsl1","termid":"PBO:0088933"}


id: PBO:0002890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc5","termid":"PBO:0002890"}


id: GO:0102841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:11607123","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity","secondary_identifiers":["EC:1.14.19.23","MetaCyc:RXN-8302"],"termid":"GO:0102841"}


id: SO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of three nucleotide bases in tRNA which recognizes a codon in mRNA.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"},{"relation_name":"part_of","term_name":"anticodon_loop","termid":"SO:0001173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","secondary_identifiers":["http://en.wikipedia.org/wiki/Anticodon"],"synonyms":[{"name":"anti-codon","type":"exact"}],"termid":"SO:0001174"}


id: PBO:0054035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1366","termid":"PBO:0054035"}


id: MOD:00299
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-asparagine residue and an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoaspartyl)-L-lysine and the release of ammonia.","definition_xrefs":["PubMed:11000116","PubMed:6503713","RESID:AA0294","ChEBI:21862","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"N6-(L-isoaspartyl)-L-lysine","termid":"MOD:01929"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoaspartyl)-L-lysine (Asn)","synonyms":[{"name":"(2S)-2-amino-6-([(3S)-3-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl lysine isopeptide (Lys-Asn)","type":"exact"},{"name":"N(epsilon)-(beta-aspartyl)lysine","type":"exact"},{"name":"N-(beta-Aspartyl)-Lysine (Crosslink)","type":"exact"},{"name":"N6-(L-isoaspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asn)","type":"exact"},{"name":"beta-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"isoaspartyl N6-lysine","type":"exact"}],"termid":"MOD:00299"}


id: GO:0018823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexa-1,5-diene-1-carbonyl-CoA + H2O = 6-hydroxycyclohex-1-enecarbonyl-CoA.","definition_xrefs":["EC:4.2.1.100","RHEA:21856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclohexa-1,5-dienecarbonyl-CoA hydratase activity","secondary_identifiers":["KEGG_REACTION:R05597","MetaCyc:4.2.1.100-RXN","UM-BBD_reactionID:r0203"],"synonyms":[{"name":"6-hydroxycyclohex-1-enecarbonyl-CoA (cyclohexa-1,5-dienecarbonyl-CoA-forming)","type":"related"},{"name":"cyclohex-1,5-diene-1-carbonyl-CoA hydratase activity","type":"exact"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carboxyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-dienecarbonyl-CoA hydro-lyase activity","type":"related"},{"name":"dienoyl-CoA hydratase activity","type":"related"}],"termid":"GO:0018823"}


id: PBO:0082090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; member of the S. pombe RAD2/FEN1 family; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082090"}


id: GO:0042268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytolysis","termid":"GO:0042268"}


id: PBO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 3","termid":"PBO:0039575"}


id: PBO:0091741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, paralog of SPNCRNA.118","termid":"PBO:0091741"}


id: PBO:0063357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 2","termid":"PBO:0063357"}


id: PBO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"battenin CLN3 family protein","termid":"PBO:0001310"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: PBO:0030149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-glutamyltransferase_activity","termid":"PBO:0030149"}


id: GO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a NAD(P)+ to NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","secondary_identifiers":["EC:1.20.1.-"],"termid":"GO:0050499"}


id: PBO:0089793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr2","termid":"PBO:0089793"}


id: GO:0006258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucose metabolic process","termid":"GO:0006011"},{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-glucose catabolic process","secondary_identifiers":["GO:0019691"],"synonyms":[{"name":"UDP-glucose breakdown","type":"exact"},{"name":"UDP-glucose catabolism","type":"exact"},{"name":"UDP-glucose conversion","type":"related"},{"name":"UDP-glucose degradation","type":"exact"}],"termid":"GO:0006258"}


id: PBO:0087110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal RNA processing element (RRPE)-binding protein; involved in the glucose-induced transition from quiescence to growth; restricted to nucleus in quiescent cells, released into cytoplasm after glucose repletion; binds Sin3p; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087110"}


id: GO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N-acetylserotonin = S-adenosyl-L-homocysteine + melatonin. Melatonin is also known as N-acetyl-5-methoxytryptamine.","definition_xrefs":["EC:2.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"acetylserotonin O-methyltransferase activity","secondary_identifiers":["MetaCyc:ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN","RHEA:15573","GO:0017097"],"synonyms":[{"name":"N-acetylserotonin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-acetylserotonin O-methyltransferase activity","type":"related"},{"name":"acetylserotonin methyltransferase activity","type":"related"},{"name":"hydroxyindole O-methyltransferase activity","type":"related"},{"name":"hydroxyindole methyltransferase activity","type":"related"}],"termid":"GO:0017096"}


id: PBO:0078109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1","termid":"PBO:0078109"}


id: PBO:0085249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perilipin, involved in formation and stability of lipid droplets; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange","termid":"PBO:0085249"}


id: PBO:0013802
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MET17","termid":"PBO:0013802"}


id: PBO:0003418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription related zf-ZZ type zinc finger protein","termid":"PBO:0003418"}


id: GO:0008377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the detection of light triggers the release of internally sequestered calcium ions.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete light-induced release of internally sequestered calcium ion (obsolete GO:0008377)","synonyms":[{"name":"light-induced release of calcium from internal store","type":"exact"},{"name":"light-induced release of internally sequestered calcium ion (Ca2+)","type":"exact"},{"name":"light-induced release of internally stored calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0008377"}


id: PBO:0049590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 8","termid":"PBO:0049590"}


id: GO:0060716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the labyrinthine layer of the placenta over time, from its formation to the mature structure. The embryonic vessels grow through the layer to come in close contact with the maternal blood supply.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"},{"relation_name":"is_a","term_name":"placenta blood vessel development","termid":"GO:0060674"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer blood vessel development","termid":"GO:0060716"}


id: GO:0045905
data:
  {"annotated_genes":["SJAG_02812","SJAG_05265","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65711,67572,90981],"is_not":false,"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational termination","termid":"GO:0006449"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"positively_regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational termination","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of translational termination","type":"narrow"},{"name":"stimulation of translational termination","type":"narrow"},{"name":"up regulation of translational termination","type":"exact"},{"name":"up-regulation of translational termination","type":"exact"},{"name":"upregulation of translational termination","type":"exact"}],"termid":"GO:0045905","terms_by_termid":{"GO:0045905":null}}


id: PATO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001184 maturity value (obsolete PATO:0001184)","termid":"PATO:0001184"}


id: GO:0043150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA that contributes to the process of double-strand break repair via homologous recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281","GO:0006310"],"is_obsolete":false,"name":"DNA synthesis involved in double-strand break repair via homologous recombination","synonyms":[{"name":"DNA synthesis during double-strand break repair via homologous recombination","type":"related"}],"termid":"GO:0043150"}


id: PBO:0080779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related X-linked","termid":"PBO:0080779"}


id: PBO:0077826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member E","termid":"PBO:0077826"}


id: GO:0102676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: avenasterol + O2 + NADPH + H+ = 5-dehydroavenasterol + 2 H2O + NADP.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"avenasterol-desaturase activity","secondary_identifiers":["MetaCyc:RXN-4209"],"termid":"GO:0102676"}


id: PBO:0068837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 75, pseudogene","termid":"PBO:0068837"}


id: PR:O60078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tyr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.04c","synonyms":[{"name":"PRDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tyr1","type":"exact"}],"termid":"PR:O60078"}


id: PBO:0014292
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Casein KInase","termid":"PBO:0014292"}


id: FYPO:0003381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular glycerol level","synonyms":[{"name":"increased cellular glycerol level during mitotic cell cycle","type":"related"},{"name":"increased cellular glycerol level during vegetative growth","type":"exact"},{"name":"increased glycerol accumulation","type":"related"}],"termid":"FYPO:0003381"}


id: GO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type III hypersensitivity","termid":"GO:0001803"}


id: GO:1904160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a chloroplast starch grain.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:25710501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chloroplast","termid":"GO:0072598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to chloroplast starch grain","synonyms":[{"name":"protein localisation in chloroplast starch grain","type":"exact"},{"name":"protein localisation to chloroplast starch grain","type":"exact"},{"name":"protein localization in chloroplast starch grain","type":"exact"}],"termid":"GO:1904160"}


id: PBO:0064923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 5 catalytic subunit","termid":"PBO:0064923"}


id: PBO:0055448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2880","termid":"PBO:0055448"}


id: PBO:0071317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene","termid":"PBO:0071317"}


id: PBO:0060549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAXD antisense RNA 1","termid":"PBO:0060549"}


id: PR:Q09717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ran-specific GTPase-activating protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ran-specific GTPase-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.07c","secondary_identifiers":["UniProtKB:Q09717"],"synonyms":[{"name":"RANBP1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1773.07c","type":"related"},{"name":"Spom972h-RANBP1","type":"exact"},{"name":"ran-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spi1-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"yrb1","type":"related"}],"termid":"PR:Q09717"}


id: PBO:0050517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D1","termid":"PBO:0050517"}


id: PBO:0040233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 5","termid":"PBO:0040233"}


id: FYPO:0002438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are shorter than normal and abnormally oriented within the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"has_part","term_name":"misoriented actin cables","termid":"FYPO:0002436"},{"relation_name":"is_a","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"is_a","term_name":"misoriented actin cables","termid":"FYPO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"short, misoriented actin cables","synonyms":[{"name":"short, abnormally oriented actin cables","type":"exact"},{"name":"short, misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"short, misoriented actin cables during vegetative growth","type":"exact"},{"name":"short, misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002438"}


id: MOD:01474
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-[S-(carboxymethyl)phosphopantetheine]-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-[S-(carboxymethyl)phosphopantetheine]-L-serine","termid":"MOD:01474"}


id: RO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between entities participating in some developmental process (GO:0032502)","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_related_to","termid":"RO:0002324"}


id: PBO:0028208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_cytoplasmic_protein_localization","termid":"PBO:0028208"}


id: PBO:0072504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 33","termid":"PBO:0072504"}


id: GO:0005681
data:
  {"annotated_genes":["SJAG_04914","SJAG_03112","SJAG_02560","SJAG_05025","SJAG_03547","SJAG_03070","SJAG_02879","SJAG_02688","SJAG_04385","SJAG_00313","SJAG_05224","SJAG_01331","SJAG_00577","SJAG_03279","SJAG_05009","SJAG_03430","SJAG_00225","SJAG_00446","SJAG_04222","SJAG_03711","SJAG_03245","SJAG_02295","SJAG_00602","SJAG_01810","SJAG_04318","SJAG_03469","SJAG_02558","SJAG_00322","SJAG_01408","SJAG_01186","SJAG_02078","SJAG_04230","SJAG_05208","SJAG_04163","SJAG_01452","SJAG_01870","SJAG_00147","SJAG_05235","SJAG_00643","SJAG_04055","SJAG_03993","SJAG_04117","SJAG_01008","SJAG_00809","SJAG_01433","SJAG_02396","SJAG_00076","SJAG_05240","SJAG_00639","SJAG_02844","SJAG_03983","SJAG_02005","SJAG_00058","SJAG_02308","SJAG_03301","SJAG_01557","SJAG_02304","SJAG_03410","SJAG_01214","SJAG_04911","SJAG_00363","SJAG_00498","SJAG_00563","SJAG_00989","SJAG_02455","SJAG_03427","SJAG_01654","SJAG_00094","SJAG_01547","SJAG_00474","SJAG_16453","SJAG_03995","SJAG_04427","SJAG_00597","SJAG_00571","SJAG_00504","SJAG_00206","SJAG_04214","SJAG_03966","SJAG_00859","SJAG_02469","SJAG_04694","SJAG_03210","SJAG_03687","SJAG_01144","SJAG_00249","SJAG_01629","SJAG_00564","SJAG_01308","SJAG_03460","SJAG_02905","SJAG_01200","SJAG_02317","SJAG_01919","SJAG_02722","SJAG_05212","SJAG_01152","SJAG_00911","SJAG_02772","SJAG_02687","SJAG_02018","SJAG_02843","SJAG_05211","SJAG_01315","SJAG_04497","SJAG_01819","SJAG_00414","SJAG_02227","SJAG_02686","SJAG_02862","SJAG_00998","SJAG_04898","SJAG_04783","SJAG_02279","SJAG_03601","SJAG_05349","SJAG_01301","SJAG_04529","SJAG_01504","SJAG_02185","SJAG_04433"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58684,73002,74385,85679,85736,86437,87603,87978,88284,88332,88847,88872,89491,91097,91176,91572,91783,92341,92621,93016,93582,94190,94620,95209,96790,96850,98873,99197,101683,102036,102472,102568,102717,103341,103826,104946,105048,105413,105737,105938,106238,106247,107458,107922,107964,108834,109283,110045,111371,112127,113180,113360,114675,115010],"is_not":false,"summary":null,"term":"GO:0005681"},{"annotations":[98870,103822,106242,106805,107961,109350,107455,91347,109640,88542,91511,88950,105042,94616,113035,113960,112562,107883,100651,109054,109279,89221,91093,111092,91776,89548,105409,102930,104419,102028,94187,107918,99191,106235,88866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071013"},{"annotations":[87740,106839,114837,97408,99381,91348,109455,102029,94009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[100206,96789,94188,93014,104944,88482,98711,101682,91352,91570,113037,91780,103339,92620,101810,105411,103824,113358,91513,115009,109281,91096,89550,95207,105045,102033,106236,84554,85205,106246,84011,111651,111650,102715,107456,106808,100681,107920,98872,112125,102566,84561,94686,94619,92339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071014"},{"annotations":[105046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071020"},{"annotations":[91781,98353,102034,102603,112028,90342,111097,89551,109061,94958,108630,98712,91353,101996,106809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071011"},{"annotations":[91573,93017,101939,113361,96851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[102569,102718,93018,113362,104947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[85206,86396,105049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[110530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[101799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[94012,87744,89553,106813,112569,108548,106831,106841,84745,97411,110035,91357,105693,102570,103114,91100,106239,98715,92507,89224,104948,111410,101685,109459,114840,102039,91515,91786,99384,102934,108836,97908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"},{"annotations":[99370,101020,96852,115011,110046,86161,99198,107459,99192,100682,111149,93852,114104,98814,92342,100652,103342,84746,84012,91979,101811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005684"}]},"cv_name":"cellular_component","definition":"Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.","definition_xrefs":["GOC:editors","GOC:mah","ISBN:0198547684","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":121,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00563":null,"SJAG_00564":null,"SJAG_00571":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00639":null,"SJAG_00643":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_00989":null,"SJAG_00998":null,"SJAG_01008":null,"SJAG_01144":null,"SJAG_01152":null,"SJAG_01186":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01315":null,"SJAG_01331":null,"SJAG_01408":null,"SJAG_01433":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01547":null,"SJAG_01557":null,"SJAG_01629":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_01919":null,"SJAG_02005":null,"SJAG_02018":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02308":null,"SJAG_02317":null,"SJAG_02396":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02686":null,"SJAG_02687":null,"SJAG_02688":null,"SJAG_02722":null,"SJAG_02772":null,"SJAG_02843":null,"SJAG_02844":null,"SJAG_02862":null,"SJAG_02879":null,"SJAG_02905":null,"SJAG_03070":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03245":null,"SJAG_03279":null,"SJAG_03301":null,"SJAG_03410":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04055":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04385":null,"SJAG_04427":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_04914":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05208":null,"SJAG_05211":null,"SJAG_05212":null,"SJAG_05224":null,"SJAG_05235":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"spliceosomal complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Spliceosome"],"synonyms":[{"name":"spliceosome","type":"broad"},{"name":"spliceosome complex","type":"exact"}],"termid":"GO:0005681","terms_by_termid":{"GO:0000243":null,"GO:0005681":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071011":null,"GO:0071013":null,"GO:0071014":null,"GO:0071020":null,"GO:0071021":null}}


id: PBO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall 1,3-beta-glucanosyltransferase Gas4","termid":"PBO:0090723"}


id: GO:0036355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + S-adenosyl-L-methionine + reduced acceptor = 2-iminoacetate + 4-methylphenol + 5'-deoxyadenosine + L-methionine + acceptor + 2 H+.","definition_xrefs":["GOC:crds","MetaCyc:RXN-11319","PMID:17403671","EC:4.1.99.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-iminoacetate synthase activity","secondary_identifiers":["RHEA:26361"],"termid":"GO:0036355"}


id: PBO:0017621
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia","termid":"PBO:0017621"}


id: FYPO:0002003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["PomBase:mah","GO:0000978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished","type":"exact"},{"name":"abolished transcription factor binding to promoter region","type":"related"}],"termid":"FYPO:0002003"}


id: GO:0033573
data:
  {"annotated_genes":["SJAG_04677","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88631,88635],"is_not":false,"summary":null,"term":"GO:0033573"}]},"cv_name":"cellular_component","definition":"A protein complex composed of a multicopper ferroxidase that oxidizes Fe(II) to Fe(III), and a ferric iron permease that transports the produced Fe(III) into the cell. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:16522632","PMID:8599111","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"is_a","term_name":"ferroxidase complex","termid":"GO:1905862"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04675":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"high-affinity iron permease complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity iron permease complex","type":"exact"}],"termid":"GO:0033573","terms_by_termid":{"GO:0033573":null}}


id: GO:0051552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavones, a class of pigmented plant compounds based on 2-phenyl-4H-1-benzopyran-4-one (2-phenylchromone).","definition_xrefs":["PMID:18567791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavone metabolic process","synonyms":[{"name":"2-phenyl-4H-1-benzopyran-4-one metabolic process","type":"narrow"},{"name":"2-phenyl-4H-1-benzopyran-4-one metabolism","type":"narrow"},{"name":"2-phenylchromone metabolic process","type":"narrow"},{"name":"2-phenylchromone metabolism","type":"narrow"},{"name":"flavone metabolism","type":"exact"}],"termid":"GO:0051552"}


id: PBO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPM1","termid":"PBO:0012262"}


id: PBO:0036272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in regulation of cytoplasmic translational termination (predicted)","termid":"PBO:0036272"}


id: PBO:0060190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 8","termid":"PBO:0060190"}


id: FYPO:0001788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cytoplasm","synonyms":[{"name":"normal protein localisation to cytoplasm","type":"exact"},{"name":"normal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0001788"}


id: PBO:0084877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; null mutant does not grow on glycerol, is sensitive to 2,4-dichlorophenol, and accumulates large lipid droplets","termid":"PBO:0084877"}


id: GO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cessation of menstruation, occurring in (e.g.) the human female usually around the age of 50.","definition_xrefs":["GOC:curators","PMID:18495681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"},{"relation_name":"is_a","term_name":"reproductive senescence","termid":"GO:1990636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menopause","secondary_identifiers":["Wikipedia:Menopause"],"termid":"GO:0042697"}


id: PBO:0029408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h-_cells","termid":"PBO:0029408"}


id: PBO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2149","termid":"PBO:0054740"}


id: GO:0102114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: decanoate + NADPH + O2 + H+ = 10-hydroxycaprate + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caprate dehydroxylase activity (obsolete GO:0102114)","termid":"GO:0102114"}


id: PBO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 6 (pseudogene)","termid":"PBO:0044719"}


id: PBO:0059343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 2","termid":"PBO:0059343"}


id: PBO:0111811
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0111811"}


id: GO:0009498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type ferredoxin (obsolete GO:0009498)","synonyms":[{"name":"bacterial-type ferredoxin","type":"exact"}],"termid":"GO:0009498"}


id: PR:G2TRR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.10","synonyms":[{"name":"Spom972h-SPBPB21E7.10","type":"exact"}],"termid":"PR:G2TRR8"}


id: GO:0034333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:aruk","GOC:mah","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"adherens junction assembly","synonyms":[{"name":"adherens junction formation","type":"exact"}],"termid":"GO:0034333"}


id: GO:0030233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes transport of all four deoxy (d) NDPs, and, less efficiently, the corresponding dNTPs, in exchange for dNDPs, ADP, or ATP.","definition_xrefs":["PMID:11226231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"deoxynucleotide transmembrane transporter activity","termid":"GO:0030233"}


id: PBO:0028189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell,_normal_cell_length","termid":"PBO:0028189"}


id: PBO:0088193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor; contains a Zn(2)-Cys(6) binuclear cluster domain, positively regulates transcription of URA1, URA3, URA4, and URA10, which are involved in de novo pyrimidine biosynthesis, in response to pyrimidine starvation; activity may be modulated by interaction with Tup1p","termid":"PBO:0088193"}


id: GO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replication of rDNA following its excision from the chromosome of dividing cells as they age. Extrachromosomal rDNA forms a circle that contains at least one autonomously replicating sequence (ARS), which supports replication independent of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete replication of extrachromosomal rDNA circles involved in replicative cell aging (obsolete GO:0001312)","synonyms":[{"name":"replication of extrachromosomal rDNA circles during replicative cell ageing","type":"related"},{"name":"replication of extrachromosomal rDNA circles during replicative cell aging","type":"related"},{"name":"replication of extrachromosomal ribosomal DNA circles during replicative cell aging","type":"related"}],"termid":"GO:0001312"}


id: GO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the chromoplast envelope; also faces the chromoplast stroma.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"chromoplast membrane","termid":"GO:0046862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromoplast inner membrane","termid":"GO:0031899"}


id: GO:0140567
data:
  {"annotated_genes":["SJAG_01435","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97184,112474],"is_not":false,"summary":null,"term":"GO:0140567"}]},"cv_name":"molecular_function","definition":"The activity of removing a protein from a membrane, by binding to a transmembrane helical fragment of a tail-anchored protein and releasing it from the the hydrophobic region of one or both lipid bilayers. The reaction is driven by ATP hydrolysis.","definition_xrefs":["PMID:24821790","PMID:28712723","PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01435":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140318","GO:0005215"],"is_obsolete":false,"name":"membrane protein dislocase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"transmembrane helix dislocasentransmembrane protein dislocase activity","type":"related"}],"termid":"GO:0140567","terms_by_termid":{"GO:0140567":null}}


id: PBO:0088552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex WD repeat subunit Wdr83","termid":"PBO:0088552"}


id: PBO:0089801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S11","termid":"PBO:0089801"}


id: PBO:0060084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 31","termid":"PBO:0060084"}


id: PR:Q10414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CWF19-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00248","PRO:DNx","PANTHER:PTHR12072:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19-like protein mug161 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.09","secondary_identifiers":["UniProtKB:Q10414"],"synonyms":[{"name":"Spom972h-CWF19L1","type":"exact"},{"name":"meiotically up-regulated gene 161 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10414"}


id: PBO:0027413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027413"}


id: PBO:0087359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing protein; required for splicing of two mitochondrial group I introns (BI3 in COB and AI5beta in COX1); forms a splicing complex, containing four subunits of Mrs1p and two subunits of the BI3-encoded maturase, that binds to the BI3 RNA; MRS1 has a paralog, CCE1, that arose from the whole genome duplication","termid":"PBO:0087359"}


id: GO:0102703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (-)-camphene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.117","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"camphene synthase activity","secondary_identifiers":["MetaCyc:RXN-5142","RHEA:25484"],"termid":"GO:0102703"}


id: PBO:0054885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2299","termid":"PBO:0054885"}


id: PR:A0ZWU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eaf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A0ZWU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ell1-associated factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.10c","synonyms":[{"name":"Spom972h-eaf1","type":"exact"}],"termid":"PR:A0ZWU1"}


id: PBO:0082019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZXD family zinc finger C","termid":"PBO:0082019"}


id: PBO:0077975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 3-1","termid":"PBO:0077975"}


id: PR:000050452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rnc1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"RNA-binding protein that suppresses calcineurin deletion 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPCC757.09c","type":"related"},{"name":"Spom-rnc1","type":"exact"},{"name":"rnc1","type":"related"}],"termid":"PR:000050452"}


id: PBO:0054891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2305","termid":"PBO:0054891"}


id: PBO:0081724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 652 pseudogene 1","termid":"PBO:0081724"}


id: PBO:0004043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a (predicted)","termid":"PBO:0004043"}


id: PBO:0086056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes","termid":"PBO:0086056"}


id: PBO:0049222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 5","termid":"PBO:0049222"}


id: PBO:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24 (predicted)","termid":"PBO:0002674"}


id: FYPO:0003952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during oxidative stress response","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during cellular response to oxidative stress","type":"exact"},{"name":"delayed protein phosphorylation during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0003952"}


id: PBO:0027339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-cysteine_ligase_activity","termid":"PBO:0027339"}


id: PATO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer exhibiting molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesive","synonyms":[{"name":"resinous","type":"related"}],"termid":"PATO:0002331"}


id: PBO:0079704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding protein 1","termid":"PBO:0079704"}


id: PBO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane signaling receptor Wsc1 (predicted)","termid":"PBO:0031899"}


id: GO:0050321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tau-protein = ADP + O-phospho-tau-protein.","definition_xrefs":["MetaCyc:TAU-PROTEIN-KINASE-RXN","EC:2.7.11.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0004672","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"tau-protein kinase activity","synonyms":[{"name":"ATP:tau-protein O-phosphotransferase activity","type":"broad"},{"name":"CDK5/p23","type":"related"},{"name":"GSK","type":"related"},{"name":"STK31","type":"related"},{"name":"TPK","type":"related"},{"name":"TPK I","type":"related"},{"name":"TPK II","type":"related"},{"name":"TTK","type":"related"},{"name":"[Tau protein] kinase activity","type":"exact"},{"name":"brain protein kinase PK40erk activity","type":"narrow"},{"name":"cdk5/p20","type":"related"},{"name":"glycogen synthase kinase-3beta activity","type":"related"},{"name":"protein tau kinase activity","type":"related"},{"name":"tau kinase activity","type":"related"},{"name":"tau protein kinase activity","type":"related"},{"name":"tau-protein kinase I activity","type":"narrow"},{"name":"tau-protein kinase II activity","type":"narrow"},{"name":"tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:0050321"}


id: PBO:0110491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 6","termid":"PBO:0110491"}


id: PBO:0031107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damaging_agents","termid":"PBO:0031107"}


id: GO:0106230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a propionyl group from a residue in a peptide or protein.","definition_xrefs":["PMID:30026585","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein depropionylation","termid":"GO:0106230"}


id: GO:0023023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MHC protein complex binding","termid":"GO:0023023"}


id: PBO:0027043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glucose_consumption","termid":"PBO:0027043"}


id: GO:0015722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Enables the transfer of bile acid from one side of a hepatocyte plasma membrane into a bile canaliculus. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid and bile salt transport","termid":"GO:0015721"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"canalicular bile acid transport","termid":"GO:0015722"}


id: GO:0052638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-butyrate + UDP-D-glucose = indole-3-butyryl-beta-1-D-glucose + UDP.","definition_xrefs":["MetaCyc:RXN-11655","RHEA:62708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-butyrate beta-glucosyltransferase activity","synonyms":[{"name":"IBA-Glc synthetase activity","type":"exact"},{"name":"IBA-glucose synthase activity","type":"exact"},{"name":"IBAGlu synthase activity","type":"exact"},{"name":"UDP-glucose:(indol-3-yl)butyrate beta-D-glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose:indol-3-ylbutyrate glucosyl-transferase activity","type":"exact"},{"name":"UDP-glucose:indol-3-ylbutyrate glucosyltransferase activity","type":"exact"},{"name":"UDPG-indol-3-ylbutyryl glucosyl transferase activity","type":"exact"},{"name":"UDPglucose:indole-3-butyrate beta-D-glucosyltransferase activity","type":"exact"},{"name":"indol-3-ylbutyrylglucose synthase activity","type":"exact"},{"name":"indole-3-butyric acid glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-indolebutyrate glucosyltransferase activity","type":"exact"}],"termid":"GO:0052638"}


id: GO:0102421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: curcumin 4'-O-beta-D-gentiobioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotrioside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"curcumin-4'-O-beta-D-gentiobioside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13813"],"termid":"GO:0102421"}


id: GO:0010793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of mRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"mRNA export from nucleus","termid":"GO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of mRNA export from nucleus","termid":"GO:0010793"}


id: GO:0098908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:isa_complete","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal action potential","synonyms":[{"name":"generation of action potential","type":"related"}],"termid":"GO:0098908"}


id: PBO:0064390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 12","termid":"PBO:0064390"}


id: PBO:0053538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 540","termid":"PBO:0053538"}


id: GO:0051827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring on or near the exterior of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development on or near surface of other organism during symbiotic interaction (obsolete GO:0051827)","synonyms":[{"name":"growth or development on or near surface of other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0051827"}


id: GO:0047120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+ = 3,4-dihydroxybenzoate + CO2 + NADH.","definition_xrefs":["RHEA:10744","EC:1.3.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate dehydrogenase activity","secondary_identifiers":["GO:0018514","UM-BBD_reactionID:r0151","MetaCyc:1.3.1.53-RXN","KEGG_REACTION:R01633"],"synonyms":[{"name":"(1R,2S)-dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-4,5-dihydroxycyclohexa-1(6),2-diene-1,4-dicarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"terephthalate 1,2-cis-dihydrodiol dehydrogenase activity","type":"exact"}],"termid":"GO:0047120"}


id: GO:0033947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the alpha-D-mannosyl-(1->6)-beta-D-mannosyl-(1->4)-beta-D-N-acetylglucosaminyl-(1->4)-beta-D-N-acetylglucosaminyl sequence of glycoprotein to alpha-D-mannosyl-(1->6)-D-mannose and beta-D-N-acetylglucosaminyl-(1->4)-beta-D-N-acetylglucosaminyl sequences.","definition_xrefs":["EC:3.2.1.152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"mannosylglycoprotein endo-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.152-RXN"],"synonyms":[{"name":"endo-beta-mannosidase activity","type":"related"}],"termid":"GO:0033947"}


id: GO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the biosynthesis of retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"retinoic acid biosynthetic process","synonyms":[{"name":"retinoic acid anabolic process","type":"exact"},{"name":"retinoic acid biosynthesis","type":"exact"}],"termid":"GO:0002138"}


id: PBO:0069392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 652, pseudogene","termid":"PBO:0069392"}


id: GO:1903216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["GOC:PARL","PMID:21370995","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial processing","type":"broad"},{"name":"regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903216"}


id: GO:1990384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the hyaloid vascular plexus is destroyed as a part of its normal progression.","definition_xrefs":["GOC:hjd","PMID:18841878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaloid vascular plexus regression","termid":"GO:1990384"}


id: PR:O94659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.01c","synonyms":[{"name":"Spom972h-nog1","type":"exact"}],"termid":"PR:O94659"}


id: GO:0008612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["GOC:ma","ISBN:0198547684","RESID:AA0116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"peptidyl-lysine modification to peptidyl-hypusine","secondary_identifiers":["GO:0046515"],"synonyms":[{"name":"hypusine anabolism","type":"exact"},{"name":"hypusine anabolism from peptidyl-lysine","type":"exact"},{"name":"hypusine biosynthesis","type":"exact"},{"name":"hypusine biosynthetic process","type":"exact"},{"name":"hypusine biosynthetic process from peptidyl-lysine","type":"exact"},{"name":"hypusine formation","type":"exact"},{"name":"hypusine formation from peptidyl-lysine","type":"exact"},{"name":"hypusine synthesis","type":"exact"},{"name":"hypusine synthesis from peptidyl-lysine","type":"exact"},{"name":"hypusinylation","type":"exact"},{"name":"protein hypusination","type":"exact"}],"termid":"GO:0008612"}


id: GO:0071004
data:
  {"annotated_genes":["SJAG_03983","SJAG_03547","SJAG_01870","SJAG_01301","SJAG_00809","SJAG_01008","SJAG_00474","SJAG_00577","SJAG_02558","SJAG_04214","SJAG_05240","SJAG_00249","SJAG_00225","SJAG_00911","SJAG_00859","SJAG_02304","SJAG_03210","SJAG_03995","SJAG_00058","SJAG_01654","SJAG_03469","SJAG_04911","SJAG_02844","SJAG_05009","SJAG_04163","SJAG_00147","SJAG_02279","SJAG_00322","SJAG_00498","SJAG_02185","SJAG_00504","SJAG_04318"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84745,87744,89224,89553,91100,91357,91515,91786,92507,94012,97411,97908,98715,99384,101685,102039,102570,102934,103114,104948,105693,106239,106813,106831,106841,108548,108836,109459,110035,111410,112569,114840],"is_not":false,"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP. The prespliceosome includes many proteins in addition to those found in the U1 and U2 snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation.","definition_xrefs":["PMID:19239890","GOC:ab","GOC:krc","GOC:mah","PMID:17332742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"prespliceosome","termid":"GO:0071010"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02844":null,"SJAG_03210":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U2-type prespliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG prespliceosome","type":"narrow"},{"name":"major prespliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex A","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B","type":"narrow"}],"termid":"GO:0071004","terms_by_termid":{"GO:0071004":null}}


id: GO:0045747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Notch signaling pathway","synonyms":[{"name":"activation of Notch signaling pathway","type":"narrow"},{"name":"positive regulation of N signaling pathway","type":"exact"},{"name":"positive regulation of N signalling pathway","type":"exact"},{"name":"positive regulation of Notch signalling pathway","type":"exact"},{"name":"stimulation of Notch signaling pathway","type":"narrow"},{"name":"up regulation of Notch signaling pathway","type":"exact"},{"name":"up-regulation of Notch signaling pathway","type":"exact"},{"name":"upregulation of Notch signaling pathway","type":"exact"}],"termid":"GO:0045747"}


id: PBO:0071577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 6","termid":"PBO:0071577"}


id: PBO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at heterochromatic regions, Swi6_dependent","termid":"PBO:0002149"}


id: SO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript which is partially duplicated due to duplication of DNA, leading to a new transcript that is only partial and likely nonfunctional.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_duplicated_transcript","synonyms":[{"name":"partially duplicated transcript","type":"exact"}],"termid":"SO:0002244"}


id: PBO:0071882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 20","termid":"PBO:0071882"}


id: PBO:0052224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 2","termid":"PBO:0052224"}


id: GO:1905748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a hard palate is generated and organized.","definition_xrefs":["GOC:TermGenie","GO_REF:0000083","PMID:23419067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate morphogenesis","synonyms":[{"name":"palatum durum morphogenesis","type":"exact"}],"termid":"GO:1905748"}


id: PBO:0050009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HK2 divergent transcript","termid":"PBO:0050009"}


id: GO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"negatively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aeciospore formation","termid":"GO:0075250"}


id: PBO:0066275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member J","termid":"PBO:0066275"}


id: GO:1905193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chloroplast fission.","definition_xrefs":["PMID:26862170","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of chloroplast fission","termid":"GO:1905192"},{"relation_name":"negatively_regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chloroplast fission","synonyms":[{"name":"down regulation of chloroplast division","type":"exact"},{"name":"down regulation of chloroplast fission","type":"exact"},{"name":"down-regulation of chloroplast division","type":"exact"},{"name":"down-regulation of chloroplast fission","type":"exact"},{"name":"downregulation of chloroplast division","type":"exact"},{"name":"downregulation of chloroplast fission","type":"exact"},{"name":"inhibition of chloroplast division","type":"narrow"},{"name":"inhibition of chloroplast fission","type":"narrow"},{"name":"negative regulation of chloroplast division","type":"exact"}],"termid":"GO:1905193"}


id: GO:2001153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal water transport","termid":"GO:2001151"},{"relation_name":"positively_regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal water transport","termid":"GO:2001153"}


id: PATO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000681 incidence value (obsolete PATO:0000681)","termid":"PATO:0000681"}


id: GO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, core RNA polymerase II binding (obsolete GO:0000991)","synonyms":[{"name":"core RNA polymerase II binding transcription factor activity","type":"exact"}],"termid":"GO:0000991"}


id: PBO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4 pseudogene 1","termid":"PBO:0045720"}


id: PBO:0003523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase (predicted)","termid":"PBO:0003523"}


id: GO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs), in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH","PMID:16858867"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity, TBP-class protein binding (obsolete GO:0001132)","synonyms":[{"name":"TATA-binding protein binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"TBP-class protein binding RNA polymerase II transcription factor activity","type":"exact"},{"name":"TRF protein binding RNA polymerase II transcription factor activity","type":"narrow"}],"termid":"GO:0001132"}


id: GO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.5","RHEA:21836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"arabinonate dehydratase activity","secondary_identifiers":["MetaCyc:ARABINONATE-DEHYDRATASE-RXN","KEGG_REACTION:R03032"],"synonyms":[{"name":"D-arabinonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming)","type":"related"},{"name":"D-arabinonate hydro-lyase activity","type":"related"}],"termid":"GO:0047675"}


id: PBO:0065302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 12","termid":"PBO:0065302"}


id: PBO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in nitrogen metabolism","termid":"PBO:0005589"}


id: PBO:0069482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 749, pseudogene","termid":"PBO:0069482"}


id: PR:Q9P7W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.07 gene.","definition_xrefs":["UniProtKB:Q9P7W3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.07","synonyms":[{"name":"ATP-citrate (pro-S-)-lyase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1703.07","type":"exact"},{"name":"citrate cleavage enzyme subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7W3"}


id: PBO:0054911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2325","termid":"PBO:0054911"}


id: GO:0008440
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94970],"is_not":false,"summary":null,"term":"GO:0008440"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:11020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 3-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855233","Reactome:R-HSA-1855153","KEGG_REACTION:R03433","MetaCyc:2.7.1.127-RXN","EC:2.7.1.127"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 3-kinase activity","type":"broad"},{"name":"IP3 3-kinase activity","type":"narrow"},{"name":"IP3K activity","type":"narrow"},{"name":"Ins(1,4,5)P3 3-kinase activity","type":"related"},{"name":"inositol trisphosphate 3-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 3-kinase activity","type":"broad"}],"termid":"GO:0008440","terms_by_termid":{"GO:0008440":null}}


id: PBO:0111889
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead domain","termid":"PBO:0111889"}


id: GO:0031139
data:
  {"annotated_genes":["SJAG_00472","SJAG_04312","SJAG_04682","SJAG_05000","SJAG_00975","SJAG_03453","SJAG_00526","SJAG_01084","SJAG_04206","SJAG_04026","SJAG_00210","SJAG_02923","SJAG_03735","SJAG_01794","SJAG_01509","SJAG_05153","SJAG_00993","SJAG_02380","SJAG_03501","SJAG_03081","SJAG_01254","SJAG_06638","SJAG_03340","SJAG_02266","SJAG_00117","SJAG_02472","SJAG_04813","SJAG_00600","SJAG_04509","SJAG_00990","SJAG_03486","SJAG_02730","SJAG_01345","SJAG_00514","SJAG_03346","SJAG_02233","SJAG_01311","SJAG_02066","SJAG_02444","SJAG_00256","SJAG_03067","SJAG_02785","SJAG_02592","SJAG_01699","SJAG_02723","SJAG_04009","SJAG_01718","SJAG_02379","SJAG_03623","SJAG_03802","SJAG_00781","SJAG_01113","SJAG_03309","SJAG_00664","SJAG_02773","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84375,87044,94734,95610,96284,97926,101078,103312,107551,112441],"is_not":false,"summary":null,"term":"GO:0031139"},{"annotations":[94600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[111741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[103224,102443,112310,115196,84260,112648,115197,114346,85426,104987,95663,111742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[100667,87592,101976,105199,89103,96700,84435,102070,102822,90406,111688,102662,103018,112238,110640,98015,90547],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[89499],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[92557,85446,93226,102444,88368,89500],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[84374,103311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[103226,97551,99540,84089,96657,112442,115201,95664,100609,115200,104758,104988],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[86075,89662,107543,87045,84129],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[111744,102546,87050,107544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that increases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04509":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of conjugation with cellular fusion","type":"narrow"},{"name":"stimulation of conjugation with cellular fusion","type":"narrow"},{"name":"up regulation of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0031139","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null,"GO:1900237":null,"GO:1902917":null}}


id: FYPO:0009085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to lithium chloride and SDS","type":"exact"},{"name":"resistance to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and SDS in combination","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to lithium chloride and SDS","type":"exact"},{"name":"resistant to lithium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009085"}


id: PBO:0038397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_during","termid":"PBO:0038397"}


id: PR:O14011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02137","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing factor 19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.08c","secondary_identifiers":["UniProtKB:O14011"],"synonyms":[{"name":"Spom972h-PRPF19","type":"exact"},{"name":"complexed with cdc5 protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14011"}


id: PBO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 1","termid":"PBO:0043460"}


id: PBO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Sbp1","termid":"PBO:0003128"}


id: GO:0099549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by carbon monoxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"}


id: FYPO:0005960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a mitotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PomBase:mah","PMID:15797925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000120"],"is_obsolete":false,"name":"multipolar mitotic spindle","synonyms":[{"name":"multipolar spindle during mitosis","type":"exact"},{"name":"multipolar spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0005960"}


id: PBO:0046443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPN2 intronic transcript 1","termid":"PBO:0046443"}


id: PBO:0079005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 5-1","termid":"PBO:0079005"}


id: GO:0097164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the ammonium ion.","definition_xrefs":["GOC:dhl","PMID:14671018","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ammonium ion metabolic process","synonyms":[{"name":"ammonium ion metabolism","type":"exact"},{"name":"ammonium metabolic process","type":"related"}],"termid":"GO:0097164"}


id: PBO:0005028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase (predicted)","termid":"PBO:0005028"}


id: RO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. ","direct_ancestors":[{"relation_name":"is_a","term_name":"has_synaptic_terminal_in","termid":"RO:0002130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}


id: PR:O42861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.01c","synonyms":[{"name":"Fun thirty-related protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft3","type":"exact"}],"termid":"PR:O42861"}


id: MOD:00582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 6x(13)C,2x(15)N labeled L-lysine.","definition_xrefs":["PubMed:12716131","OMSSA:181","Unimod:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,2x(15)N labeled L-lysine","synonyms":[{"name":"13C(6) 15N(2) Silac label","type":"related"},{"name":"Label:13C(6)15N(2)","type":"related"},{"name":"lys-13C615N2","type":"exact"}],"termid":"MOD:00582"}


id: PBO:0002561
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.96","termid":"PBO:0002561"}


id: GO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + 2-oxoglutarate + O2 = (3S)-3-hydroxy-L-histidyl-[protein] + succinate + CO2.","definition_xrefs":["PMID:21251231","RHEA:54256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016491"],"is_obsolete":false,"name":"peptidyl-histidine dioxygenase activity","secondary_identifiers":["EC:1.14.11.79","Reactome:R-HSA-9630993","MetaCyc:RXN-22839","Reactome:R-HSA-9630967"],"synonyms":[{"name":"protein histidyl hydroxylase","type":"broad"},{"name":"protein-L-histidine (3S)-3-hydroxylase","type":"exact"}],"termid":"GO:0036139"}


id: GO:0021910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that results in the spatial identity of regions along the dorsal-ventral axis of the spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GOC:tb","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in ventral spinal cord patterning","synonyms":[{"name":"hedgehog signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"hh signaling pathway involved in ventral spinal cord patterning","type":"exact"},{"name":"smoothened signalling pathway in ventral spinal cord patterning","type":"exact"}],"termid":"GO:0021910"}


id: PBO:0075913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 5","termid":"PBO:0075913"}


id: GO:0032805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor catabolic process","termid":"GO:0032803"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"positive regulation of receptor catabolic process","termid":"GO:2000646"},{"relation_name":"positively_regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0030163","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"activation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"positive regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor degradation","type":"exact"},{"name":"stimulation of low-density lipoprotein receptor catabolic process","type":"narrow"},{"name":"up regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor catabolic process","type":"exact"}],"termid":"GO:0032805"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: GO:0052599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylputrescine + H2O + O2 = N-methylaminobutanal + NH3 + hydrogen peroxide + H+.","definition_xrefs":["MetaCyc:RXN-8244","PMID:17283012","PMID:24287136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methylputrescine oxidase activity","secondary_identifiers":["KEGG_REACTION:R05334","EC:1.4.3.22"],"synonyms":[{"name":"N-methylputrescine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052599"}


id: GO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + glycano-(1->3)-(N-acetyl-alpha-D-galactosaminyl)-glycoprotein = CMP + glycano-[(2->6)-alpha-N-acetylneuraminyl]-(N-acetyl-D-galactosaminyl)-glycoprotein.","definition_xrefs":["EC:2.4.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.3-RXN","Reactome:R-HSA-9846305","Reactome:R-HSA-9603991","RHEA:11136","Reactome:R-HSA-4084980"],"synonyms":[{"name":"GalNAc alpha-2,6-sialyltransferase I activity","type":"related"}],"termid":"GO:0001665"}


id: GO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which phytosterols are taken up from the contents of the intestine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal phytosterol absorption","termid":"GO:0060752"}


id: GO:0051214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by RNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL4 is the primary Dicer to detect RNA viruses.","definition_xrefs":["PMID:15165191","PMID:17693253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against RNA virus","synonyms":[{"name":"RNA VIGS","type":"exact"},{"name":"RNA virus induced gene silencing","type":"exact"},{"name":"RNA virus-induced PTGS","type":"exact"},{"name":"RNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051214"}


id: GO:0009518
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex associated with photosystem I.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid light-harvesting complex","termid":"GO:0009503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"PSI associated light-harvesting complex I","synonyms":[{"name":"LHCI","type":"exact"}],"termid":"GO:0009518"}


id: GO:0099523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the cytosol consisting of all cytosol that is part of the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic region","termid":"GO:0099522"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"presynaptic cytosol","termid":"GO:0099523"}


id: PBO:0080591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 18","termid":"PBO:0080591"}


id: PBO:0031445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_double-strand_break_repair","termid":"PBO:0031445"}


id: PBO:0052390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 27","termid":"PBO:0052390"}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["RHEA:16145","MetaCyc:1.14.18.2-RXN"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: PBO:0086787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0086787"}


id: GO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Female behaviors associated with the care and rearing of offspring.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal behavior","synonyms":[{"name":"maternal behaviour","type":"exact"}],"termid":"GO:0042711"}


id: PBO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 11 Y-linked","termid":"PBO:0061821"}


id: PBO:0036048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_mitotic_spindle_during_anaphase_B","termid":"PBO:0036048"}


id: PBO:0066585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member B","termid":"PBO:0066585"}


id: GO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of boron obtained from boron-containing substances.","definition_xrefs":["PMID:20059736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to boron-containing substance levels","termid":"GO:0080029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to boron-containing substance deprivation","synonyms":[{"name":"cellular response to boron deprivation","type":"exact"},{"name":"cellular response to boron starvation","type":"exact"}],"termid":"GO:0080169"}


id: GO:0032069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nuclease activity","synonyms":[{"name":"nuclease regulator activity","type":"related"}],"termid":"GO:0032069"}


id: MOD:01002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyryl","termid":"MOD:01002"}


id: PBO:0076233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURF1 cytochrome c oxidase assembly factor","termid":"PBO:0076233"}


id: GO:0009181
data:
  {"annotated_genes":["SJAG_02369","SJAG_00605","SJAG_04192","SJAG_04334","SJAG_03660","SJAG_00633","SJAG_00685","SJAG_06622","SJAG_04048","SJAG_02107","SJAG_02945","SJAG_00027","SJAG_00839","SJAG_02135","SJAG_02796","SJAG_03828","SJAG_03903","SJAG_03852","SJAG_02009","SJAG_00461","SJAG_03373","SJAG_05314","SJAG_01310","SJAG_06621","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101622,99819,101989,91191,105110,105116,105582,105578,105583,101988,94445,105111,101623,105115,105112,90701,105584,105114,101624,105113,105580,112518,99560,105581,100631,94173,105579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107756,94362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72033,75078],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009181","terms_by_termid":{"GO:0006096":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: PBO:0036307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb2","termid":"PBO:0036307"}


id: PBO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_metabolism_phenotype","termid":"PBO:0031290"}


id: PBO:0062576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 5 pseudogene","termid":"PBO:0062576"}


id: GO:0043995
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84660],"is_not":false,"summary":null,"term":"GO:0043995"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 5) = CoA + histone H4 N6-acetyl-L-lysine (position 5).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0034212","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H4K5 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K5 specific)","type":"exact"}],"termid":"GO:0043995","terms_by_termid":{"GO:0043995":null}}


