# terms

id: PBO:0086890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of sorbitol with moderate affinity and mannitol with lower affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; similarity to hexose transporters; expression is repressed by high levels of glucose","termid":"PBO:0086890"}


id: GO:0008190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"eukaryotic initiation factor 4E binding","synonyms":[{"name":"eIF4E binding","type":"exact"}],"termid":"GO:0008190"}


id: FYPO:0006737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of alpha-hibitakanine. Normally, wild-type cell populations survive longer in the presence of alpha-hibitakanine than in its absence.","definition_xrefs":["PMID:29900664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"stationary phase viability unaffected by alpha-hibitakanine","synonyms":[{"name":"chronological lifespan unaffected by alpha-hibitakanine","type":"related"},{"name":"loss of chronological lifespan extension by alpha-hibitakanine","type":"related"},{"name":"loss of stationary phase viability extension in presence of alpha-hibitakanine","type":"exact"}],"termid":"FYPO:0006737"}


id: PBO:0046095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A3","termid":"PBO:0046095"}


id: PBO:0039359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 1","termid":"PBO:0039359"}


id: GO:0098887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor from the postsynaptic endosome to the postsynaptic membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport, endosome to plasma membrane","termid":"GO:0099639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"neurotransmitter receptor transport, endosome to postsynaptic membrane","synonyms":[{"name":"postsynaptic neurotransmitter receptor endosomal trafficking","type":"broad"}],"termid":"GO:0098887"}


id: GO:0008681
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99414],"is_not":false,"summary":null,"term":"GO:0008681"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-octaprenyl-6-methoxyphenol + O2 + 4 H+ = 2-octaprenyl-6-methoxy-1,4-benzoquinol + H2O.","definition_xrefs":["PMID:4572721","RHEA:29407","PMID:27822549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681","terms_by_termid":{"GO:0008681":null}}


id: GO:1900532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of cell proliferation during cellular hyperosmotic response.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell proliferation involved in cellular hyperosmotic response (obsolete GO:1900532)","synonyms":[{"name":"down regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"down-regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"downregulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"inhibition of cell proliferation of cellular HOG response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hyperosmotic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hypertonic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular response to hypertonicity","type":"narrow"},{"name":"negative regulation of cell proliferation involved in cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular response to hypertonicity","type":"exact"}],"termid":"GO:1900532"}


id: PBO:0056763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 2","termid":"PBO:0056763"}


id: FYPO:0003425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to rapamycin. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to rapamycin","synonyms":[{"name":"abolished protein binding during cellular response to rapamycin","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0003425"}


id: PBO:0083902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin adenine dinucleotide (FAD) synthetase; performs the second step in synthesis of FAD from riboflavin; mutation is functionally complemented by human FLAD1","termid":"PBO:0083902"}


id: PBO:0071011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 13","termid":"PBO:0071011"}


id: GO:0021519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an association neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord association neuron specification","termid":"GO:0021519"}


id: GO:1990523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of bone following its loss or destruction.","definition_xrefs":["PMID:25257467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone regeneration","termid":"GO:1990523"}


id: GO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an olfactory bulb tufted cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"olfactory bulb development","termid":"GO:0021772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb tufted cell development","termid":"GO:0061449"}


id: GO:0030379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neurotensin, a neuropeptide active in the central and peripheral nervous system in mammals, and transmitting the signal from one side of the membrane to the other by a mechanism independent of coupling to G proteins.","definition_xrefs":["PMID:9756851","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotensin receptor activity, non-G protein-coupled","synonyms":[{"name":"neurotensin receptor activity, non G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, non-G-protein coupled","type":"exact"},{"name":"non G protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein-coupled neurotensin receptor activity","type":"exact"}],"termid":"GO:0030379"}


id: PBO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein (predicted)","termid":"PBO:0000478"}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: PBO:0078872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 6","termid":"PBO:0078872"}


id: PBO:0045663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dymeclin","termid":"PBO:0045663"}


id: PBO:0064026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 60","termid":"PBO:0064026"}


id: PBO:0090747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein Rud3","termid":"PBO:0090747"}


id: PBO:0108906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPCPD1 pseudogene 1","termid":"PBO:0108906"}


id: PATO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing three homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Triploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploid","termid":"PATO:0001381"}


id: GO:1905567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:22848640","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905567)","synonyms":[{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"}],"termid":"GO:1905567"}


id: PBO:0069776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1060, pseudogene","termid":"PBO:0069776"}


id: PBO:0076571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3L","termid":"PBO:0076571"}


id: PBO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulin","termid":"PBO:0060813"}


id: FYPO:0004283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oxanine DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal oxanine DNA N-glycosylase activity","termid":"FYPO:0004283"}


id: GO:1901219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart morphogenesis","termid":"GO:2000826"},{"relation_name":"regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac chamber morphogenesis","synonyms":[{"name":"regulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901219"}


id: PBO:0028089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_central_core","termid":"PBO:0028089"}


id: PBO:0031327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_copper","termid":"PBO:0031327"}


id: PBO:0064774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 6","termid":"PBO:0064774"}


id: GO:0010803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the tumor necrosis factor-mediated signaling pathway. The tumor necrosis factor-mediated signaling pathway is the series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"regulation of TNF signaling","type":"exact"},{"name":"regulation of TNF-mediated signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0010803"}


id: PR:Q09725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein mis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.05c","synonyms":[{"name":"SCC2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis4","type":"exact"}],"termid":"PR:Q09725"}


id: PR:Q10279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fur4 gene.","definition_xrefs":["UniProtKB:Q10279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.03","synonyms":[{"name":"Spom972h-fur4","type":"exact"}],"termid":"PR:Q10279"}


id: PBO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyldihydroxyacetone phosphate reductase (predicted)","termid":"PBO:0002486"}


id: PBO:0038761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 6","termid":"PBO:0038761"}


id: GO:0110146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a magnetosome.","definition_xrefs":["GOC:aa","PMID:27620945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"magnetosome","termid":"GO:0110143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome membrane","termid":"GO:0110146"}


id: PBO:0074325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1","termid":"PBO:0074325"}


id: PBO:0073211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 4C","termid":"PBO:0073211"}


id: GO:0052846
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101361,111224],"is_not":false,"summary":null,"term":"GO:0052846"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + phosphate + H+.","definition_xrefs":["PMID:10827188","PMID:11502751","PMID:26422458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052841"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0101012","MetaCyc:RXN-10965"],"synonyms":[{"name":"inositol 1,5-bisdiphosphate 2,3,4,6-tetrakisphosphate 1-diphosphatase activity","type":"exact"},{"name":"inositol 1,5-bispyrophosphate 2,3,4,6-tetrakisphosphate 1-pyrophosphatase activity","type":"exact"}],"termid":"GO:0052846","terms_by_termid":{"GO:0052846":null}}


id: PBO:0090777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein Apq12","termid":"PBO:0090777"}


id: GO:0061579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzing the reaction: acyl-[acyl-carrier-protein] + S-adenosyl-L-methionine -> [acyl-carrier- protein] + S-methyl-5'-thioadenosine + N-acyl-L-homoserine lactone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acyl homoserine lactone synthase activity","secondary_identifiers":["RHEA:10096","EC:2.3.1.184"],"synonyms":[{"name":"autoinducer-1 synthase","type":"related"}],"termid":"GO:0061579"}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: PBO:0066313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 7","termid":"PBO:0066313"}


id: GO:0035377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of water (H2O) from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"is_a","term_name":"epithelial fluid transport","termid":"GO:0042045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transepithelial water transport","termid":"GO:0035377"}


id: PBO:0030048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric_iron_import","termid":"PBO:0030048"}


id: PBO:0082082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribulose-1-phosphate dehydratase; acts in the methionine salvage pathway; potential Smt3p sumoylation substrate; expression downregulated by caspofungin and deletion mutant is caspofungin resistant","termid":"PBO:0082082"}


id: RO:HOM0000052
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Peramorphosis that is produced by a delay in the offset of development.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_peramorphosis_relationship_with","termid":"RO:HOM0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_hypermorphosis_relationship_with","termid":"RO:HOM0000052"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: PBO:0056828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase 2 (putative)","termid":"PBO:0056828"}


id: PBO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036156"}


id: SO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat at the ends of and within the sequence for which it has functional significance other than long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:terminal","type":"exact"},{"name":"terminal repeat","type":"exact"}],"termid":"SO:0002201"}


id: PBO:0086087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein packaged into COPII vesicles for ER to Golgi trafficking; forms a complex with Emp47p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0086087"}


id: GO:0050401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["RHEA:19157","EC:4.2.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02429","MetaCyc:XYLONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"D-xylo-aldonate dehydratase activity","type":"related"},{"name":"D-xylonate dehydratase activity","type":"related"},{"name":"D-xylonate hydro-lyase (2-dehydro-3-deoxy-D-xylonate-forming)","type":"related"},{"name":"D-xylonate hydro-lyase activity","type":"related"}],"termid":"GO:0050401"}


id: PBO:0088007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C serine/threonine protein phosphatase (PP2C); alternatively spliced to create two mRNA isoforms; protein from spliced form localizes to the mitochondria while the one from the unspliced form is localized to the nuclear envelope; activates coenzyme Q6 biosynthesis by dephosphorylation of demethoxy-Q6 hydroxylase Coq7p","termid":"PBO:0088007"}


id: PBO:0041539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 80","termid":"PBO:0041539"}


id: PBO:0041720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calumenin","termid":"PBO:0041720"}


id: GO:1904697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:9788538","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acinar cell proliferation","synonyms":[{"name":"regulation of acinic cell proliferation","type":"exact"},{"name":"regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904697"}


id: MOD:00273
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, two L-glutamic acid residues, an L-histidine residue and a four-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide.","definition_xrefs":["RESID:AA0268","PubMed:12764602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide","synonyms":[{"name":"4Fe-2S-3O cluster","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S)","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S); via persulfide group","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S); via tele nitrogen","type":"exact"},{"name":"hybrid four iron cluster 2","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O5-glutamato 2-iron-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"prismane iron-sulfur cofactor","type":"related"},{"name":"tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide","type":"exact"}],"termid":"MOD:00273"}


id: GO:0140200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-activating adrenergic receptor signaling pathway involved in regulation of heart rate (obsolete GO:0140200)","termid":"GO:0140200"}


id: FYPO:0000056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria have fused into fewer and larger structures than normal, or failed to undergo fission.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mitochondria fused","synonyms":[{"name":"fused mitochondria","type":"exact"},{"name":"mitochondria fused during mitotic cell cycle","type":"related"},{"name":"mitochondria fused during vegetative growth","type":"exact"}],"termid":"FYPO:0000056"}


id: PR:O94272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-aminobutyric acid receptor-associated protein-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03808","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.24c","secondary_identifiers":["UniProtKB:O94272"],"synonyms":[{"name":"Spom972h-GABARAPL2","type":"exact"},{"name":"autophagy-related ubiquitin-like modifier atg8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94272"}


id: GO:0018459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,5R)-carveol + NADP+ = (R)-carvone + H+ + NADPH.","definition_xrefs":["RHEA:13629","EC:1.1.1.243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carveol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03114","MetaCyc:CARVEOL-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0714"],"synonyms":[{"name":"(-)-trans-carveol dehydrogenase activity","type":"related"},{"name":"(-)-trans-carveol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018459"}


id: GO:0051307
data:
  {"annotated_genes":["SJAG_02104","SJAG_01330","SJAG_04126","SJAG_04457","SJAG_02542","SJAG_04259","SJAG_00145","SJAG_01082","SJAG_03327","SJAG_01837","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113710],"is_not":false,"summary":null,"term":"GO:0051307"},{"annotations":[102484,110668],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[90065,106370],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[102485,97964,110670,112834],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[94867],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[109971],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[91338],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[97499],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"The process in which chromosomes are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_02104":null,"SJAG_02542":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome separation during meiosis","type":"exact"},{"name":"meiotic chromosome resolution","type":"exact"}],"termid":"GO:0051307","terms_by_termid":{"GO:0033316":null,"GO:0051307":null,"GO:0051755":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271).","definition_xrefs":["PMID:11030750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-L-fucose biosynthetic process","termid":"GO:0042350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"'de novo' GDP-L-fucose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-66"],"synonyms":[{"name":"'de novo' GDP-L-fucose anabolism","type":"exact"},{"name":"'de novo' GDP-L-fucose biosynthesis","type":"exact"},{"name":"'de novo' GDP-L-fucose formation","type":"exact"},{"name":"'de novo' GDP-L-fucose synthesis","type":"exact"},{"name":"GDP-L-fucose biosynthesis, de novo pathway","type":"exact"},{"name":"GDP-L-fucose biosynthetic process, de novo pathway","type":"exact"}],"termid":"GO:0042351"}


id: PBO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp15 (predicted)","termid":"PBO:0000407"}


id: PATO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having an equal-sided rectangular form.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallelogram","termid":"PATO:0002317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"square","termid":"PATO:0000413"}


id: PBO:0059076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 2","termid":"PBO:0059076"}


id: GO:0043198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic shaft","secondary_identifiers":["NIF_Subcellular:sao2034472720"],"synonyms":[{"name":"trunk","type":"related"}],"termid":"GO:0043198"}


id: GO:2000310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N-methyl-D-aspartate selective glutamate receptor activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of NMDA receptor activity","synonyms":[{"name":"regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"}],"termid":"GO:2000310"}


id: PBO:0016568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs85a (predicted)","termid":"PBO:0016568"}


id: GO:0061980
data:
  {"annotated_genes":["SJAG_02621","SJAG_03042","SJAG_04061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108395,114223,84997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035197"}]},"cv_name":"molecular_function","definition":"Binding to a small regulatory RNA, a short RNA (usually 50-200 nt long) that is either independently transcribed or processed from a longer RNA by an RNAse enzyme.","definition_xrefs":["PMID:23475961","PMID:14622403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"regulatory RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061980","terms_by_termid":{"GO:0035197":null}}


id: GO:0015877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of biopterin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Biopterin is a growth factor for certain protozoans and some insects; it is widely distributed in tissues and functions in a reduced form, tetrahydrobiopterin, as a hydroxylation coenzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"biopterin transport","termid":"GO:0015877"}


id: PBO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member A","termid":"PBO:0047245"}


id: GO:0006500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein palmitoylation","termid":"GO:0018345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"N-terminal protein palmitoylation","termid":"GO:0006500"}


id: PBO:0048235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 4","termid":"PBO:0048235"}


id: GO:0047763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,4-dihydroxy-trans-cinnamate = S-adenosyl-L-homocysteine + 3-methoxy-4-hydroxy-trans-cinnamate.","definition_xrefs":["MetaCyc:CAFFEATE-O-METHYLTRANSFERASE-RXN","EC:2.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"caffeate O-methyltransferase activity","secondary_identifiers":["RHEA:20225","MetaCyc:RXN-1104"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,4-dihydroxy-trans-cinnamate 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:caffeic acid-O-methyltransferase activity","type":"related"},{"name":"caffeate 3-O-methyltransferase activity","type":"related"},{"name":"caffeate methyltransferase activity","type":"related"}],"termid":"GO:0047763"}


id: GO:0015549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of carbonyl cyanide m-chlorophenylhydrazone from one side of a membrane to the other. Carbonyl cyanide m-chlorophenylhydrazone is a proton ionophore, commonly used as an uncoupling agent and inhibitor of photosynthesis because of its effects on mitochondrial and chloroplast membranes.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbonyl cyanide m-chlorophenylhydrazone transmembrane transporter activity (obsolete GO:0015549)","synonyms":[{"name":"CCCP transporter activity","type":"exact"},{"name":"carbonyl cyanide m-chlorophenylhydrazone transporter activity","type":"related"},{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"related"}],"termid":"GO:0015549"}


id: PBO:0068889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 130, pseudogene","termid":"PBO:0068889"}


id: PBO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G","termid":"PBO:0043283"}


id: PBO:0030233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030233"}


id: PBO:0036133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0036133"}


id: PBO:0027665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_telomere","termid":"PBO:0027665"}


id: PBO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2E (inactive)","termid":"PBO:0052570"}


id: PBO:0004789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA C-acetyltransferase Erg10 (predicted)","termid":"PBO:0004789"}


id: PBO:0012526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_development_of","termid":"PBO:0012526"}


id: GO:0030717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:11700288","PMID:18039935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyosome formation","termid":"GO:0061988"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"oocyte karyosome formation","termid":"GO:0030717"}


id: PBO:0052901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-12","termid":"PBO:0052901"}


id: GO:0034006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = amorpha-4,11-diene + diphosphate.","definition_xrefs":["EC:4.2.3.24","RHEA:18325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"amorpha-4,11-diene synthase activity","secondary_identifiers":["KEGG_REACTION:R07630","MetaCyc:RXN-8046"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (amorpha-4,11-diene-forming) activity","type":"related"},{"name":"amorphadiene synthase activity","type":"related"}],"termid":"GO:0034006"}


id: PBO:0052654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 22","termid":"PBO:0052654"}


id: FYPO:0000877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000877"}


id: GO:0106035
data:
  {"annotated_genes":["SJAG_02745","SJAG_01147","SJAG_00040","SJAG_04016","SJAG_02866","SJAG_03532","SJAG_02497","SJAG_03222","SJAG_02895","SJAG_03913"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83878,85184,91832,96194,100443,100934,106051,110929,112281,113166],"is_not":false,"summary":null,"term":"GO:0106035"}]},"cv_name":"biological_process","definition":"The transfer of an assembled 4Fe-4S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation by iron-sulfur cluster transfer","termid":"GO:0097428"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_01147":null,"SJAG_02497":null,"SJAG_02745":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_03222":null,"SJAG_03532":null,"SJAG_03913":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"protein maturation by [4Fe-4S] cluster transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106035","terms_by_termid":{"GO:0106035":null}}


id: PBO:0081176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 26","termid":"PBO:0081176"}


id: GO:0052620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + thymine + acceptor = 5-methyl-barbiturate + donor-H2.","definition_xrefs":["RHEA:13469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thymine dehydrogenase activity","secondary_identifiers":["EC:1.17.99.4","MetaCyc:RXN-8646"],"termid":"GO:0052620"}


id: GO:0009230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"thiamine-containing compound catabolic process","termid":"GO:0042725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0006790","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"thiamine catabolic process","synonyms":[{"name":"thiamin catabolic process","type":"exact"},{"name":"thiamine breakdown","type":"exact"},{"name":"thiamine catabolism","type":"exact"},{"name":"thiamine degradation","type":"exact"},{"name":"vitamin B1 catabolic process","type":"exact"},{"name":"vitamin B1 catabolism","type":"exact"}],"termid":"GO:0009230"}


id: GO:0048838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the dormant state is broken in a seed. Dormancy is characterized by a suspension of physiological activity that can be reactivated upon release.","definition_xrefs":["GOC:jid","GOC:dph","ISBN:9781405139830","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed dormancy process","termid":"GO:0010162"},{"relation_name":"is_a","term_name":"exit from dormancy","termid":"GO:0097438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"release of seed from dormancy","termid":"GO:0048838"}


id: GO:1904522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast cell apoptotic process.","definition_xrefs":["PMID:26119034","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of myofibroblast cell apoptotic process","termid":"GO:1904520"},{"relation_name":"positively_regulates","term_name":"myofibroblast cell apoptotic process","termid":"GO:1904516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast cell apoptotic process","synonyms":[{"name":"activation of MFB apoptosis","type":"narrow"},{"name":"activation of MFB apoptotic process","type":"narrow"},{"name":"activation of myofibroblast cell apoptosis","type":"narrow"},{"name":"activation of myofibroblast cell apoptotic process","type":"narrow"},{"name":"positive regulation of MFB apoptosis","type":"narrow"},{"name":"positive regulation of MFB apoptotic process","type":"exact"},{"name":"positive regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up regulation of MFB apoptosis","type":"narrow"},{"name":"up regulation of MFB apoptotic process","type":"exact"},{"name":"up regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"up-regulation of MFB apoptosis","type":"narrow"},{"name":"up-regulation of MFB apoptotic process","type":"exact"},{"name":"up-regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up-regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"upregulation of MFB apoptosis","type":"narrow"},{"name":"upregulation of MFB apoptotic process","type":"exact"},{"name":"upregulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"upregulation of myofibroblast cell apoptotic process","type":"exact"}],"termid":"GO:1904522"}


id: PBO:0062856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 1","termid":"PBO:0062856"}


id: GO:1902917
data:
  {"annotated_genes":["SJAG_00514","SJAG_01794","SJAG_04509","SJAG_02379","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84129,86075,87045,89662,107543],"is_not":false,"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating projection assembly.","definition_xrefs":["PMID:12455985","GO_REF:0000058","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"part_of","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mating projection assembly","type":"narrow"},{"name":"activation of mating projection biogenesis","type":"related"},{"name":"positive regulation of mating projection biogenesis","type":"related"},{"name":"up regulation of mating projection assembly","type":"exact"},{"name":"up regulation of mating projection biogenesis","type":"related"},{"name":"up-regulation of mating projection assembly","type":"exact"},{"name":"up-regulation of mating projection biogenesis","type":"related"},{"name":"upregulation of mating projection assembly","type":"exact"},{"name":"upregulation of mating projection biogenesis","type":"related"}],"termid":"GO:1902917","terms_by_termid":{"GO:1902917":null}}


id: PBO:0061838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor like 1","termid":"PBO:0061838"}


id: PBO:0088533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a/L8","termid":"PBO:0088533"}


id: GO:0071229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["Wikipedia:Acid","GOC:mah","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acid chemical","synonyms":[{"name":"cellular response to acid","type":"broad"},{"name":"cellular response to acid anion","type":"related"},{"name":"cellular response to oxoanion","type":"related"}],"termid":"GO:0071229"}


id: PBO:0065279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C","termid":"PBO:0065279"}


id: GO:0030019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa, Lys-Xaa, but with more restricted specificity than trypsin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptase activity (obsolete GO:0030019)","synonyms":[{"name":"lung tryptase activity","type":"narrow"},{"name":"mast cell neutral proteinase activity","type":"related"},{"name":"mast cell protease II activity","type":"narrow"},{"name":"mast cell proteinase II","type":"related"},{"name":"mast cell serine proteinase II","type":"related"},{"name":"mast cell serine proteinase tryptase activity","type":"related"},{"name":"mast cell tryptase activity","type":"narrow"},{"name":"pituitary tryptase activity","type":"narrow"},{"name":"rat mast cell protease II","type":"related"},{"name":"skin tryptase activity","type":"narrow"},{"name":"tryptase M","type":"related"},{"name":"tryptase activity","type":"exact"}],"termid":"GO:0030019"}


id: PBO:0089993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13/Dhh1","termid":"PBO:0089993"}


id: GO:0098613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + methaneselenol => S-adenosyl-L-homocysteine + dimethyl selenide.","definition_xrefs":["PMID:17988700","PMID:14705","PMID:4380351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"methaneselenol methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408541"],"termid":"GO:0098613"}


id: PBO:0078469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-7","termid":"PBO:0078469"}


id: GO:0015668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give double-stranded fragments with terminal 5'-phosphates. ATP hydrolysis is required. Cleavage is dependent on the presence of two copies of a specific recognition sequence in an inverse orientation in the DNA. Cleavage occurs at a specific distance from one of the recognition sites.","definition_xrefs":["EC:3.1.21.5","PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788","GO:0140097"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.5-RXN"],"synonyms":[{"name":"type III restriction enzyme activity","type":"exact"}],"termid":"GO:0015668"}


id: PBO:0079515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase","termid":"PBO:0079515"}


id: GO:0015740
data:
  {"annotated_genes":["SJAG_00671","SJAG_02140","SJAG_02011","SJAG_01406","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[97823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[114579,91202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"},{"annotations":[84642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"},{"annotations":[63919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902356"},{"annotations":[97826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"},{"annotations":[97827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071422"}]},"cv_name":"biological_process","definition":"The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"C4-dicarboxylate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015740","terms_by_termid":{"GO:0070778":null,"GO:0071422":null,"GO:0071423":null,"GO:0098714":null,"GO:0098720":null,"GO:1902356":null,"GO:1990555":null}}


id: GO:0018672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + 2 H+ + NADPH + O2 = 2,3-dihydroxybenzoate + NADP+ + NH4.","definition_xrefs":["RHEA:21236","EC:1.14.13.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthranilate 3-monooxygenase (deaminating) activity","secondary_identifiers":["KEGG_REACTION:R00980","MetaCyc:1.14.13.35-RXN","UM-BBD_reactionID:r0578"],"synonyms":[{"name":"anthranilate 2,3-dioxygenase (deaminating)","type":"related"},{"name":"anthranilate 2,3-hydroxylase (deaminating) activity","type":"related"},{"name":"anthranilate hydroxylase (deaminating) activity","type":"exact"},{"name":"anthranilate hydroxylase activity","type":"broad"},{"name":"anthranilate,NADPH:oxygen oxidoreductase (3-hydroxylating, deaminating)","type":"related"}],"termid":"GO:0018672"}


id: GO:1901915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"positively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule organization","synonyms":[{"name":"activation of capsule organisation","type":"narrow"},{"name":"activation of capsule organization","type":"narrow"},{"name":"activation of capsule organization and biogenesis","type":"related"},{"name":"positive regulation of capsule organisation","type":"exact"},{"name":"positive regulation of capsule organization and biogenesis","type":"related"},{"name":"up regulation of capsule organisation","type":"exact"},{"name":"up regulation of capsule organization","type":"exact"},{"name":"up regulation of capsule organization and biogenesis","type":"related"},{"name":"up-regulation of capsule organisation","type":"exact"},{"name":"up-regulation of capsule organization","type":"exact"},{"name":"up-regulation of capsule organization and biogenesis","type":"related"},{"name":"upregulation of capsule organisation","type":"exact"},{"name":"upregulation of capsule organization","type":"exact"},{"name":"upregulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901915"}


id: PBO:0072607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 2","termid":"PBO:0072607"}


id: PBO:0017737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated protein kinase gamma subunit cbs2","termid":"PBO:0017737"}


id: PBO:0109261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NELL2 interacting cell ontogeny regulator 1","termid":"PBO:0109261"}


id: GO:1904654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung alveolus development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23962064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"negatively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung alveolus development","synonyms":[{"name":"down regulation of alveolarization","type":"exact"},{"name":"down regulation of alveologenesis","type":"exact"},{"name":"down regulation of lung alveolus development","type":"exact"},{"name":"down-regulation of alveolarization","type":"exact"},{"name":"down-regulation of alveologenesis","type":"exact"},{"name":"down-regulation of lung alveolus development","type":"exact"},{"name":"downregulation of alveolarization","type":"exact"},{"name":"downregulation of alveologenesis","type":"exact"},{"name":"downregulation of lung alveolus development","type":"exact"},{"name":"inhibition of alveolarization","type":"narrow"},{"name":"inhibition of alveologenesis","type":"narrow"},{"name":"inhibition of lung alveolus development","type":"narrow"},{"name":"negative regulation of alveolarization","type":"exact"},{"name":"negative regulation of alveologenesis","type":"exact"}],"termid":"GO:1904654"}


id: PBO:0050006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP zinc finger 3","termid":"PBO:0050006"}


id: PBO:0062663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily E member 1 pseudogene","termid":"PBO:0062663"}


id: PBO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_morphogenesis_of","termid":"PBO:0034421"}


id: PR:Q09130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif213 gene.","definition_xrefs":["UniProtKB:Q09130","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.09","synonyms":[{"name":"Spom972h-tif213","type":"exact"},{"name":"eIF-2-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09130"}


id: GO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-pipecolic acid, a metabolite of lysine.","definition_xrefs":["PMID:27758894","PMID:28330936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-pipecolic acid biosynthetic process","synonyms":[{"name":"L-pipecolate biosynthetic process","type":"exact"}],"termid":"GO:0062034"}


id: FYPO:0007402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of protein complex organization is abnormal.","definition_xrefs":["GO:0043933","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein complex organization during vegetative growth","synonyms":[{"name":"abnormal protein complex organisation during vegetative growth","type":"exact"},{"name":"abnormal protein complex organization during mitotic cell cycle","type":"related"},{"name":"abnormal protein-containing complex subunit organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007402"}


id: SO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_oligo","synonyms":[{"name":"single strand oligo","type":"exact"},{"name":"single strand oligonucleotide","type":"exact"},{"name":"single stranded oligonucleotide","type":"exact"},{"name":"ss oligo","type":"exact"},{"name":"ss oligonucleotide","type":"exact"}],"termid":"SO:0000441"}


id: PBO:0076591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 12","termid":"PBO:0076591"}


id: MOD:01550
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01550"}


id: PBO:0044334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 17","termid":"PBO:0044334"}


id: FYPO:0007034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylglyoxal than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to phenylglyoxal","synonyms":[{"name":"resistance to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"resistance to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"resistance to phenylglyoxal during vegetative growth","type":"exact"},{"name":"resistant to phenylglyoxal","type":"exact"}],"termid":"FYPO:0007034"}


id: GO:0086001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell action potential","termid":"GO:0086001"}


id: PBO:0031262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0031262"}


id: PBO:0064079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 113","termid":"PBO:0064079"}


id: GO:0102232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acrolein + NADPH + H+ = propanal + NADP.","definition_xrefs":["PMID:21169366","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acrolein reductase activity","secondary_identifiers":["MetaCyc:RXN-12281"],"termid":"GO:0102232"}


id: GO:0005502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11-cis retinal, an isomer of retinal that plays an important role in the visual process in most vertebrates. 11-cis retinal combines with opsin in the rods (scotopsin) to form rhodopsin or visual purple. Retinal is one of the three compounds that makes up vitamin A.","definition_xrefs":["PMID:24403072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal binding","termid":"GO:0016918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"11-cis retinal binding","synonyms":[{"name":"11-cis retinaldehyde binding","type":"exact"},{"name":"11-cis-retinal binding","type":"narrow"},{"name":"vitamin A binding","type":"broad"}],"termid":"GO:0005502"}


id: SO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nuclear pseudogene of either coding or non-coding mitochondria derived sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_mt_pseudogene","secondary_identifiers":["http://en.wikipedia.org/wiki/Numt"],"synonyms":[{"name":"NUMT","type":"exact"},{"name":"nuclear mitochondrial pseudogene","type":"exact"},{"name":"nuclear mt pseudogene","type":"exact"}],"termid":"SO:0001044"}


id: GO:0014878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus involved in regulation of muscle adaptation","termid":"GO:0014874"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to electrical stimulus involved in regulation of muscle adaptation","synonyms":[{"name":"response to electrical stimulus involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014878"}


id: GO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to increased oxygen levels","termid":"GO:0036296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hyperoxia","synonyms":[{"name":"response to hyperoxic stress","type":"exact"},{"name":"response to increased oxygen tension","type":"exact"}],"termid":"GO:0055093"}


id: FYECO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 24-48h. This medium is then replaced with rich medium containing nitrogen and cells allowed to grow for 4-7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"24-48h nitrogen starvation followed by 4-7 day recovery in rich medium","termid":"FYECO:0000095"}


id: GO:0042895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete antibiotic transmembrane transporter activity (obsolete GO:0042895)","synonyms":[{"name":"antibiotic transporter activity","type":"related"}],"termid":"GO:0042895"}


id: PBO:0012250
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterodimeric","termid":"PBO:0012250"}


id: GO:1905523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25749876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"positively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration","synonyms":[{"name":"activation of macrophage migration","type":"narrow"},{"name":"up regulation of macrophage migration","type":"exact"},{"name":"up-regulation of macrophage migration","type":"exact"},{"name":"upregulation of macrophage migration","type":"exact"}],"termid":"GO:1905523"}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: PBO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 2 (pseudogene)","termid":"PBO:0050034"}


id: PBO:0038910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E5","termid":"PBO:0038910"}


id: SO:1000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tandem duplication where the individual regions are not in the same orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_duplication","termid":"SO:1000173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_tandem_duplication","synonyms":[{"name":"inverted tandem duplication","type":"exact"},{"name":"mirror duplication","type":"related"}],"termid":"SO:1000040"}


id: PBO:0043483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor 1","termid":"PBO:0043483"}


id: PBO:0069894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1184, pseudogene","termid":"PBO:0069894"}


id: PBO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_pheromone","termid":"PBO:0030397"}


id: PBO:0001133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex (predicted)","termid":"PBO:0001133"}


id: GO:0009972
data:
  {"annotated_genes":["SJAG_01673","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85409,104558],"is_not":false,"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The removal of amino group in the presence of water.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine catabolic process","termid":"GO:0006216"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"cytidine deamination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009972","terms_by_termid":{"GO:0009972":null}}


id: FYPO:0005676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, does not occur after cells have been exposed to methyl methanesulfonate.","definition_xrefs":["PMID:27151298","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished proteolysis during vegetative growth","termid":"FYPO:0005377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein deubiquitination following cellular response to methyl methanesulfonate during vegetative growth","synonyms":[{"name":"abolished protein deubiquitination during cellular response to methyl methanesulfonate","type":"related"},{"name":"abolished protein deubiquitination following cellular response to MMS","type":"exact"},{"name":"abolished protein deubiquitination following cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"abolished protein deubiquitylation following cellular response to methyl methanesulfonate","type":"exact"},{"name":"protein deubiquitination following cellular response to methyl methanesulfonate abolished","type":"exact"}],"termid":"FYPO:0005676"}


id: PATO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the side of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally rotated","synonyms":[{"name":"externally rotated","type":"exact"}],"termid":"PATO:0002156"}


id: GO:1904782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NMDA glutamate receptor activity.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:12857","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"},{"relation_name":"is_a","term_name":"regulation of NMDA receptor activity","termid":"GO:2000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of NMDA glutamate receptor activity","synonyms":[{"name":"down regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"down regulation of NMDA glutamate receptor activity","type":"exact"},{"name":"down regulation of NMDA receptor","type":"exact"},{"name":"down-regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"down-regulation of NMDA glutamate receptor activity","type":"exact"},{"name":"down-regulation of NMDA receptor","type":"exact"},{"name":"downregulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"downregulation of NMDA glutamate receptor activity","type":"exact"},{"name":"downregulation of NMDA receptor","type":"exact"},{"name":"inhibition of N-methyl-D-aspartate selective glutamate receptor activity","type":"narrow"},{"name":"inhibition of NMDA glutamate receptor activity","type":"narrow"},{"name":"inhibition of NMDA receptor","type":"narrow"},{"name":"negative regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"negative regulation of NMDA receptor","type":"exact"}],"termid":"GO:1904782"}


id: GO:0019648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway in which formaldehyde is used as a carbon source in the xylulose monophosphate cycle. Methylotrophic yeasts, but not bacteria, utilize the xylulose monophosphate cycle to fix formaldehyde and convert it into metabolically useful organic compounds.","definition_xrefs":["MetaCyc:P185-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde assimilation","termid":"GO:0019649"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate metabolic process","termid":"GO:0051167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation via xylulose monophosphate cycle","synonyms":[{"name":"formaldehyde assimilation via xylulose-5-phosphate cycle","type":"exact"},{"name":"formaldehyde fixation cycle","type":"exact"}],"termid":"GO:0019648"}


id: FYPO:0005653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is higher than normal when the cell is subject to glutathione starvation.","definition_xrefs":["PomBase:mah","PMID:25806539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of iron ion starvation-induced proteins","termid":"FYPO:0002010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of iron ion starvation-induced proteins during glutathione starvation","synonyms":[{"name":"increased level of iron ion depletion-induced proteins during glutathione starvation","type":"exact"},{"name":"increased level of iron ion deprivation-induced proteins during glutathione starvation","type":"exact"},{"name":"increased level of iron ion starvation-induced proteins during cellular response to glutathione starvation","type":"exact"},{"name":"increased level of iron ion starvation-induced proteins during glutathione starvation during mitotic cell cycle","type":"related"},{"name":"increased level of iron ion starvation-induced proteins during glutathione starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0005653"}


id: PBO:0088704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF","termid":"PBO:0088704"}


id: PBO:0066565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid 5 homolog 1","termid":"PBO:0066565"}


id: PATO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased position","synonyms":[{"name":"low position","type":"related"}],"termid":"PATO:0001476"}


id: PBO:0087193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA splicing factor; required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing; interacts with Prp18p; contains zinc knuckle domain","termid":"PBO:0087193"}


id: PBO:0050054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, U (pseudogene)","termid":"PBO:0050054"}


id: PBO:0005046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, human BRP44L ortholog","termid":"PBO:0005046"}


id: SO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H+ mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat2P","termid":"SO:0002157"}


id: PBO:0052331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671 antisense RNA 1","termid":"PBO:0052331"}


id: GO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction (obsolete GO:0052522)","synonyms":[{"name":"activation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"stimulation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052522"}


id: GO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of sterigmatocystin biosynthesis. Sterigmatocystin biosynthetic processes are the chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"}


id: GO:2000709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"is_a","term_name":"regulation of centromeric sister chromatid cohesion","termid":"GO:0070602"},{"relation_name":"regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000709"}


id: RO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of negatively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulated_by","termid":"RO:0002335"}


id: PBO:0049598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 1","termid":"PBO:0049598"}


id: PBO:0034343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_with","termid":"PBO:0034343"}


id: FYPO:0006188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is decreased. Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:20110347","PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0004803"],"is_obsolete":false,"name":"decreased rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"decreased rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"reduced rate of protein exchange in actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0006188"}


id: PBO:0053489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 466","termid":"PBO:0053489"}


id: FYPO:0005710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome, followed by cell cycle arrest.","definition_xrefs":["PomBase:mah","PMID:7774573"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete re-replication, with mitotic cell cycle arrest","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with cell cycle arrest, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest with replicated DNA","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","type":"exact"}],"termid":"FYPO:0005710"}


id: MOD:02072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-serine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}


id: PBO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC intracellular cholesterol transporter 2","termid":"PBO:0061300"}


id: GO:1905468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of clathrin-coated pit assembly (obsolete GO:1905468)","synonyms":[{"name":"regulation of clathrin-coated pit formation","type":"exact"},{"name":"regulation of coated pit assembly","type":"exact"},{"name":"regulation of coated pit formation","type":"exact"}],"termid":"GO:1905468"}


id: PBO:0043066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 2","termid":"PBO:0043066"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: GO:1902716
data:
  {"annotated_genes":["SJAG_04703","SJAG_04509","SJAG_00514","SJAG_03581","SJAG_05285","SJAG_03486","SJAG_03705","SJAG_02169","SJAG_03637","SJAG_01925","SJAG_02320","SJAG_02166","SJAG_03126","SJAG_03011","SJAG_02222","SJAG_04666","SJAG_03625"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84111,86059,86912,86940,88593,90745,93378,102262,108125,109229,110323,111968,112336,112641,114028,114753,114945],"is_not":false,"summary":null,"term":"GO:1902716"}]},"cv_name":"cellular_component","definition":"Any cell cortex that is part of a growing cell tip.","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex of cell tip","termid":"GO:0051285"},{"relation_name":"part_of","term_name":"growing cell tip","termid":"GO:0035838"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02320":null,"SJAG_03011":null,"SJAG_03126":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cell cortex of growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cortex of growing cell end","type":"exact"}],"termid":"GO:1902716","terms_by_termid":{"GO:1902716":null}}


id: PBO:0041328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 81","termid":"PBO:0041328"}


id: GO:0106435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carboxylic ester + H2O = a carboxylate + an alcohol + H+.","definition_xrefs":["RHEA:21164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carboxylesterase activity","secondary_identifiers":["EC:3.1.1.1","Reactome:R-HSA-9619024","Reactome:R-HSA-9749647","Reactome:R-HSA-9727567","MetaCyc:CARBOXYLESTERASE-RXN"],"synonyms":[{"name":"B-esterase activity","type":"narrow"},{"name":"ali-esterase activity","type":"related"},{"name":"alpha-carboxylesterase activity","type":"narrow"},{"name":"cocaine esterase","type":"narrow"},{"name":"nonspecific carboxylesterase activity","type":"related"},{"name":"procaine esterase","type":"narrow"},{"name":"serine esterase activity","type":"narrow"},{"name":"triacetin esterase","type":"narrow"},{"name":"vitamin A esterase","type":"narrow"}],"termid":"GO:0106435"}


id: PBO:0059080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 3","termid":"PBO:0059080"}


id: GO:0042255
data:
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id: PBO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Cta4","termid":"PBO:0001792"}


id: GO:1903054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:22357537","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix organization","synonyms":[{"name":"down regulation of extracellular matrix organisation","type":"exact"},{"name":"down regulation of extracellular matrix organization","type":"exact"},{"name":"down regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"down-regulation of extracellular matrix organisation","type":"exact"},{"name":"down-regulation of extracellular matrix organization","type":"exact"},{"name":"down-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"downregulation of extracellular matrix organisation","type":"exact"},{"name":"downregulation of extracellular matrix organization","type":"exact"},{"name":"downregulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"inhibition of extracellular matrix organisation","type":"narrow"},{"name":"inhibition of extracellular matrix organization","type":"narrow"},{"name":"inhibition of extracellular matrix organization and biogenesis","type":"related"},{"name":"negative regulation of extracellular matrix organisation","type":"exact"},{"name":"negative regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903054"}


id: GO:0005548
data:
  {"annotated_genes":["SJAG_06440","SJAG_01470","SJAG_03338","SJAG_02897","SJAG_03710","SJAG_16459","SJAG_00576","SJAG_03721","SJAG_03416","SJAG_01225","SJAG_03741","SJAG_01229","SJAG_05209","SJAG_03172","SJAG_03746","SJAG_04984","SJAG_00669","SJAG_01731","SJAG_00230","SJAG_01945","SJAG_03100","SJAG_01305","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[95640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[98387,97450,105703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[94110,90607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[94111,90608,96356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[93730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[96357,90609,108682,95642,94112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[112411,93731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[95643,108684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[90610,94113,95644,108685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[99768,92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"},{"annotations":[102916,85444,103835,105717,93667,100223,102016,87106,103706,94807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of phospholipids into, out of or within a cell, or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00669":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_03100":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_04370":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phospholipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008497","Reactome:R-HSA-5678749","Reactome:R-HSA-5678706","Reactome:R-HSA-8867876","Reactome:R-HSA-382553","Reactome:R-HSA-8865637","Reactome:R-HSA-216757","Reactome:R-HSA-8857662"],"termid":"GO:0005548","terms_by_termid":{"GO:0008526":null,"GO:0017128":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0120014":null,"GO:0120019":null,"GO:0140345":null,"GO:0140346":null,"GO:0170045":null,"GO:0180013":null,"GO:1990050":null}}


id: PBO:0047327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"failed axon connections homolog, metaxin like GST domain containing","termid":"PBO:0047327"}


id: PBO:0049670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 2","termid":"PBO:0049670"}


id: PBO:0043152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 20","termid":"PBO:0043152"}


id: PBO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM like Rab escort protein","termid":"PBO:0043020"}


id: GO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the potential difference across the mitochondrial membrane is reduced from its steady state level.","definition_xrefs":["Wikipedia:Mitochondrion","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial depolarization","synonyms":[{"name":"mitochondria depolarization","type":"exact"},{"name":"mitochondrial depolarisation","type":"exact"},{"name":"mitochondrial membrane depolarization","type":"exact"},{"name":"mitochondrion depolarization","type":"exact"}],"termid":"GO:0051882"}


id: GO:0039560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host IRF9 (interferon regulatory factor-9), a transcription factor involved in the innate immune response. For example, viral infection triggers binding of IRF9 to phosphorylated STAT1 and STAT2, forming the ISGF3 complex. The ISGF3 complex migrates to the nucleus and activates transcription of IFN-responsive genes.","definition_xrefs":["PMID:10388655","PMID:19109390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host IRF9 activity","secondary_identifiers":["VZ:683"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"inhibition of host IRF9 by virus","type":"narrow"},{"name":"inhibition of host interferon regulatory factor-9 by virus","type":"narrow"},{"name":"suppression by virus of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host IRF9 activity","type":"narrow"},{"name":"suppression by virus of host interferon regulatory factor 9 activity","type":"narrow"}],"termid":"GO:0039560"}


id: GO:0035060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the Drosophila brm (brahma) or mammalian SMARCA2/BAF190B/BRM gene, or an ortholog thereof.","definition_xrefs":["PMID:10809665","GOC:bhm","PMID:12482982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"brahma complex","synonyms":[{"name":"BRM complex","type":"exact"}],"termid":"GO:0035060"}


id: PBO:0056151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACC1 antisense RNA 1","termid":"PBO:0056151"}


id: PBO:0084781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peroxiredoxin with thioredoxin peroxidase activity; has a role in reduction of hydroperoxides; reactivation requires Trr2p and glutathione; induced during respiratory growth and oxidative stress; phosphorylated; protein abundance increases in response to DNA replication stress","termid":"PBO:0084781"}


id: GO:0006637
data:
  {"annotated_genes":["SJAG_04865","SJAG_01989","SJAG_00902","SJAG_02380","SJAG_03715","SJAG_03471","SJAG_01402","SJAG_03290","SJAG_04499","SJAG_00866","SJAG_02158","SJAG_02741","SJAG_00947","SJAG_00982","SJAG_01474","SJAG_03349","SJAG_01524","SJAG_03163","SJAG_03064","SJAG_02006","SJAG_03909","SJAG_04007","SJAG_03313","SJAG_03813","SJAG_03731","SJAG_02769","SJAG_01187","SJAG_04895","SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92996,104895],"is_not":false,"summary":null,"term":"GO:0006637"},{"annotations":[89431,94555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[91181,104776,110411,114583,95198,83657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[111918,94218,87622,110517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[84924,111069,90622,92772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[108250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[103650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[101767,109603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[94534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[107550,111636],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[86121,111136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"},{"relation_name":"is_a","term_name":"thioester metabolic process","termid":"GO:0035383"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA metabolism","type":"exact"}],"termid":"GO:0006637","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0019287":null,"GO:0019427":null,"GO:0033512":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: GO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of a virion-bound pilus.","definition_xrefs":["GOC:bf","GOC:jl","VZ:981"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction (obsolete GO:0039667)","termid":"GO:0039667"}


id: GO:0042450
data:
  {"annotated_genes":["SJAG_01019","SJAG_01461","SJAG_01592","SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94345,98790,99621,114510],"is_not":false,"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine biosynthetic process","termid":"GO:0006526"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00635":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"arginine biosynthetic process via ornithine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism via ornithine","type":"exact"},{"name":"arginine formation via ornithine","type":"exact"},{"name":"arginine synthesis via ornithine","type":"exact"}],"termid":"GO:0042450","terms_by_termid":{"GO:0042450":null}}


id: PBO:0047353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 6","termid":"PBO:0047353"}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: GO:0000217
data:
  {"annotated_genes":["SJAG_04752","SJAG_01076","SJAG_02708","SJAG_02724","SJAG_02262","SJAG_04933","SJAG_01419","SJAG_02226","SJAG_02294","SJAG_04064","SJAG_03097","SJAG_02200","SJAG_02690","SJAG_01262","SJAG_04671","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89847,95531,112969,107659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000405"},{"annotations":[90911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"},{"annotations":[95532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062037"},{"annotations":[96748,112972,102242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000406"},{"annotations":[93105,91052,90914,88837,102243,96815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000400"},{"annotations":[102245,96749,102111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000404"},{"annotations":[102247,90915,77946,112977,104701,96750,95535,102810,84785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000403"}]},"cv_name":"molecular_function","definition":"Binding to a DNA secondary structure element such as a four-way junction, a bubble, a loop, Y-form DNA, or a double-strand/single-strand junction.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_02200":null,"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_04064":null,"SJAG_04671":null,"SJAG_04752":null,"SJAG_04933":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA secondary structure binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000217","terms_by_termid":{"GO:0000400":null,"GO:0000402":null,"GO:0000403":null,"GO:0000404":null,"GO:0000405":null,"GO:0000406":null,"GO:0062037":null}}


id: GO:0044495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which one organism modulates the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:jl","PMID:19837656","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of biological quality in another organism","termid":"GO:0044553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of blood pressure in another organism","synonyms":[{"name":"modulation of blood pressure in other organism","type":"exact"},{"name":"regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044495"}


id: GO:0097556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left posteriolateral basal body and extends cytoplasmically toward the cell posterior, marking the left anterior boundary of the lateral shield and the left lateral region of the funis before exiting at the left lateral region of the cell body.","definition_xrefs":["PMID:16607022","ISBN:9780124260207","PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left posteriolateral flagellum","synonyms":[{"name":"left posteriolateral cilium","type":"exact"},{"name":"left posterolateral cilium","type":"exact"},{"name":"left posterolateral flagellum","type":"exact"}],"termid":"GO:0097556"}


id: PBO:0024860
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex binds a 3' single-stranded DNA overhang and translocates along an DNA/RNA duplex in the 3' to 5' direction","termid":"PBO:0024860"}


id: PBO:0057718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-3","termid":"PBO:0057718"}


id: PBO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Region Maintenance","termid":"PBO:0001742"}


id: FYPO:0004924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal telomere tethering at nuclear periphery","synonyms":[{"name":"normal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere anchoring at nuclear periphery","type":"exact"},{"name":"normal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0004924"}


id: PBO:0058986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 histone lysine methyltransferase DOT1L cofactor","termid":"PBO:0058986"}


id: PBO:0047912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q22.1)","termid":"PBO:0047912"}


id: PBO:0087332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin for late-Golgi enzymes; required to maintain late-Golgi resident enzymes in their proper location by recycling molecules from the prevacuolar compartment; contains a PX domain and sequence similarity to human Snx3p","termid":"PBO:0087332"}


id: PBO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP38 divergent transcript","termid":"PBO:0080076"}


id: GO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX-serine (position 139) + ATP = histone H2AX-phosphoserine (position 139) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 139 of histone variant H2AX.","definition_xrefs":["PMID:16061642","GOC:yaf","PMID:11893489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2AX kinase activity","termid":"GO:0141003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H2AXS139 kinase activity","synonyms":[{"name":"histone H2AS139 kinase activity","type":"related"},{"name":"histone kinase activity (H2A-S139 specific)","type":"related"},{"name":"histone kinase activity (H2A.x-S139 specific)","type":"narrow"}],"termid":"GO:0035979"}


id: PBO:0066366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 10","termid":"PBO:0066366"}


id: GO:0030217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex.","definition_xrefs":["GO_REF:0000022","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation","secondary_identifiers":["GO:0042112","GO:0046652"],"synonyms":[{"name":"T cell development","type":"related"},{"name":"T lymphocyte differentiation","type":"exact"},{"name":"T-cell differentiation","type":"exact"},{"name":"T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0030217"}


id: PBO:0047793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box F2","termid":"PBO:0047793"}


id: FYPO:0006266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size of the fungal-type vacuole is normal (i.e. indistinguishable from wild type)..","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuolar morphology during vegetative growth","termid":"FYPO:0004247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuole size during vegetative growth","synonyms":[{"name":"normal vacuolar size during vegetative growth","type":"exact"},{"name":"normal vacuole size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006266"}


id: GO:0102731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol 1,3,4,6-tetrakisphosphate(8-) + ATP = H+ + 1L-myo-inositol 1,2,3,4,6-pentakisphosphate(10-) + ADP.","definition_xrefs":["EC:2.7.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"D-myo-inositol (1,3,4,6)-tetrakisphosphate 2-kinase activity","secondary_identifiers":["MetaCyc:RXN-7185"],"termid":"GO:0102731"}


id: PR:Q10166
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An omega-amidase NIT2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase C26A3.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.11","secondary_identifiers":["UniProtKB:Q10166"],"synonyms":[{"name":"Spom972h-NIT2","type":"exact"}],"termid":"PR:Q10166"}


id: GO:0008694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-octaprenyl-4-hydroxy benzoate = 2-octaprenylphenol + CO2.","definition_xrefs":["MetaCyc:3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity","secondary_identifiers":["GO:0019167","EC:4.1.1.98","RHEA:27778"],"synonyms":[{"name":"3-octaprenyl-4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl 4-hydroxybenzoate decarboxylase activity","type":"exact"},{"name":"3-polyprenyl-4-hydroxybenzoate carboxy-lyase activity","type":"exact"},{"name":"PPHB decarboxylase activity","type":"exact"},{"name":"UbiD","type":"related"},{"name":"UbiX","type":"related"},{"name":"polyprenyl p-hydroxybenzoate decarboxylase activity","type":"exact"}],"termid":"GO:0008694"}


id: FYPO:0007091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by zinc occurs to a greater extent than normal. Specific genes that are normally not transcribed in the presence of zinc ions are not derepressed in the mutant under conditions that derepress transcription in wild type cells.","definition_xrefs":["PMID:31515876","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription by nutrient","termid":"FYPO:0007090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased negative regulation of transcription by zinc","synonyms":[{"name":"increased gene repression in response to zinc","type":"exact"},{"name":"increased negative regulation of transcription by zinc during mitotic cell cycle","type":"related"},{"name":"increased negative regulation of transcription by zinc during vegetative growth","type":"exact"},{"name":"increased negative regulation of transcription in response to zinc","type":"exact"}],"termid":"FYPO:0007091"}


id: PBO:0052603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 pseudogene 1","termid":"PBO:0052603"}


id: PBO:0041084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 like transcriptional repressor","termid":"PBO:0041084"}


id: FYPO:0006068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to endoplasmic reticulum","synonyms":[{"name":"increased protein localisation to endoplasmic reticulum","type":"exact"},{"name":"increased protein localization to ER","type":"exact"},{"name":"increased protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"increased protein localization to endoplasmic reticulum during vegetative growth","type":"exact"}],"termid":"FYPO:0006068"}


id: PBO:0087585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the catalytic core of the APC/C; has similarity to cullin Cdc53p","termid":"PBO:0087585"}


id: PBO:0038605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 2","termid":"PBO:0038605"}


id: GO:1903113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of copper ion transmembrane transporter activity.","definition_xrefs":["PMID:23122209","GO_REF:0000088","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"copper ion transmembrane transporter complex","termid":"GO:1903113"}


id: PBO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin binding protein 1","termid":"PBO:0045523"}


id: GO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lectin-like natural killer cell receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"natural killer cell lectin-like receptor binding","synonyms":[{"name":"NKG2D receptor binding","type":"narrow"},{"name":"KLRC4 receptor binding","type":"narrow"},{"name":"NK cell lectin-like receptor binding","type":"exact"}],"termid":"GO:0046703"}


id: MOD:01003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butyloxymethyl (Bum)","termid":"MOD:01003"}


id: PBO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2","termid":"PBO:0036344"}


id: FYPO:0003780
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115399],"is_not":false,"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":1,"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta"],"synonyms":[{"name":"normal nuclear envelope morphology during mitosis during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during mitotic M phase","type":"related"},{"name":"normal nuclear envelope morphology during mitotic nuclear division","type":"exact"},{"name":"normal nuclear membrane morphology during mitosis","type":"narrow"}],"termid":"FYPO:0003780","terms_by_termid":{"FYPO:0003780":null}}


id: PBO:0062672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 3 pseudogene","termid":"PBO:0062672"}


id: GO:0032387
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of intracellular transport","type":"exact"},{"name":"down-regulation of intracellular transport","type":"exact"},{"name":"downregulation of intracellular transport","type":"exact"},{"name":"inhibition of intracellular transport","type":"narrow"}],"termid":"GO:0032387","terms_by_termid":{"GO:0042308":null}}


id: GO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"positively_regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell-matrix adhesion","synonyms":[{"name":"activation of cell-matrix adhesion","type":"narrow"},{"name":"stimulation of cell-matrix adhesion","type":"narrow"},{"name":"up regulation of cell-matrix adhesion","type":"exact"},{"name":"up-regulation of cell-matrix adhesion","type":"exact"},{"name":"upregulation of cell-matrix adhesion","type":"exact"}],"termid":"GO:0001954"}


id: PBO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1306, pseudogene","termid":"PBO:0070009"}


id: FYPO:0004038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which an increase in RNA level that occurs as part of a cellular response to hydrogen peroxide begins later than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:9450957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to hydrogen peroxide","termid":"FYPO:0000194"},{"relation_name":"is_a","term_name":"delayed onset of increase in RNA level during cellular response to oxidative stress","termid":"FYPO:0007793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed increase in RNA level during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to H2O2","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of increase in transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004038"}


id: PBO:0084531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); NTC contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; relocalizes to the cytosol in response to hypoxia; isy1 syf2 cells have defective spindles activiating cell cycle arrest","termid":"PBO:0084531"}


id: PBO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein 1 (predicted)","termid":"PBO:0000293"}


id: PBO:0063271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 17 pseudogene","termid":"PBO:0063271"}


id: GO:1905509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an interphase microtubule organizing center.","definition_xrefs":["GOC:TermGenie","PMID:19001497","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to interphase microtubule organizing center","synonyms":[{"name":"protein localisation in interphase microtubule organizing center","type":"exact"},{"name":"protein localisation to interphase microtubule organizing center","type":"exact"},{"name":"protein localization in interphase microtubule organizing center","type":"exact"}],"termid":"GO:1905509"}


id: PBO:0041644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 S","termid":"PBO:0041644"}


id: FYPO:0004655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to cell division site","synonyms":[{"name":"increased protein localisation to cell division site","type":"exact"},{"name":"increased protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0004655"}


id: PBO:0088844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease activator Ctp1","termid":"PBO:0088844"}


id: PBO:0058618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6750","termid":"PBO:0058618"}


id: PBO:0029898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nuclear_periphery","termid":"PBO:0029898"}


id: FYECO:0000107
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which aminopyrimidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ aminopyrimidine","termid":"FYECO:0000107"}


id: PBO:0071929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 6","termid":"PBO:0071929"}


id: GO:0004778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + succinyl-CoA = CoA + H+ + succinate.","definition_xrefs":["RHEA:11516","EC:3.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"succinyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:SUCCINYL-COA-HYDROLASE-RXN","KEGG_REACTION:R00407"],"synonyms":[{"name":"succinyl coenzyme A deacylase activity","type":"related"},{"name":"succinyl coenzyme A hydrolase activity","type":"related"},{"name":"succinyl-CoA acylase activity","type":"related"}],"termid":"GO:0004778"}


id: PBO:0088862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA N-glycosylase activity","termid":"PBO:0088862"}


id: GO:0019676
data:
  {"annotated_genes":["SJAG_04054","SJAG_03266","SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90450,97696,113867],"is_not":false,"summary":null,"term":"GO:0019676"}]},"cv_name":"biological_process","definition":"The pathway by which ammonia is processed and incorporated into a cell. In an energy-rich (glucose-containing), nitrogen-poor environment, glutamine synthetase and glutamate synthase form an ammonia assimilatory cycle, in which ammonia is incorporated into L-glutamate to form L-glutamine, which then combines with alpha-ketoglutarate to regenerate L-glutamate. This ATP-dependent cycle is essential for nitrogen-limited growth and for steady-state growth with some sources of nitrogen.","definition_xrefs":["MetaCyc:AMMASSIM-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_03266":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ammonia assimilation cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-3282"],"synonyms":[{"name":"glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:0019676","terms_by_termid":{"GO:0019676":null}}


id: PBO:0056275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1C member 1","termid":"PBO:0056275"}


id: PBO:0073309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 5","termid":"PBO:0073309"}


id: PBO:0042596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 11","termid":"PBO:0042596"}


id: GO:0019489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylgallate metabolic process","synonyms":[{"name":"methylgallate metabolism","type":"exact"}],"termid":"GO:0019489"}


id: GO:0010093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ identity","termid":"GO:0090701"},{"relation_name":"part_of","term_name":"floral organ formation","termid":"GO:0048449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ identity","termid":"GO:0010093"}


id: PBO:0108524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPRP N-terminal and LCE C-terminal like protein","termid":"PBO:0108524"}


id: PBO:0073085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHA pseudogene 1","termid":"PBO:0073085"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: GO:0007064
data:
  {"annotated_genes":["SJAG_05019","SJAG_02373","SJAG_01067","SJAG_02726","SJAG_04508","SJAG_00806","SJAG_04791","SJAG_04755","SJAG_00682","SJAG_01831","SJAG_01601","SJAG_02262","SJAG_02606","SJAG_00796","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84051,84052,84106,84389,85881,87121,87889,91051,92414,92486,100161,103922,103923,106738,113026,114118],"is_not":false,"summary":null,"term":"GO:0007064"},{"annotations":[92413],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034087"},{"annotations":[95296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission.","definition_xrefs":["GOC:rn","PMID:10827941","PMID:11389843","GOC:ai","PMID:14623866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null,"SJAG_00806":null,"SJAG_01067":null,"SJAG_01601":null,"SJAG_01831":null,"SJAG_02262":null,"SJAG_02373":null,"SJAG_02606":null,"SJAG_02726":null,"SJAG_03418":null,"SJAG_04508":null,"SJAG_04755":null,"SJAG_04791":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007064","terms_by_termid":{"GO:0007064":null,"GO:0034087":null,"GO:0071962":null}}


id: GO:0018295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein-FAD linkage via 3'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"protein-FAD linkage","termid":"GO:0018293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-FAD linkage via 3'-(8alpha-FAD)-L-histidine","termid":"GO:0018295"}


id: GO:0035739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a CD4-positive, alpha-beta T cell population by cell division.","definition_xrefs":["CL:0000624","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell proliferation","termid":"GO:0035739"}


id: PBO:0028641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis","termid":"PBO:0028641"}


id: GO:2001033
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98537],"is_not":false,"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of NHEJ","type":"exact"}],"termid":"GO:2001033","terms_by_termid":{"GO:2001033":null}}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"C1r esterase activity","type":"related"},{"name":"activated complement C1r","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


id: PBO:0051843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRS4 antisense RNA 1","termid":"PBO:0051843"}


id: PBO:0054544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1944","termid":"PBO:0054544"}


id: PBO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic mitochondrial protein (predicted)","termid":"PBO:0002043"}


id: PBO:0053672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 853","termid":"PBO:0053672"}


id: PBO:0088117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase S; expression is induced under low-nitrogen conditions","termid":"PBO:0088117"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: PBO:0034648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_SUMO_chain_length","termid":"PBO:0034648"}


id: PBO:0059532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asp (GAU/C)","termid":"PBO:0059532"}


id: PBO:0046292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 2","termid":"PBO:0046292"}


id: GO:1901282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructoselysine.","definition_xrefs":["GOC:yaf","UniPathway:UPA00784","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine biosynthetic process","termid":"GO:0030391"},{"relation_name":"is_a","term_name":"fructoselysine metabolic process","termid":"GO:0030393"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fructoselysine biosynthetic process","synonyms":[{"name":"fructosyllysine anabolism","type":"exact"},{"name":"fructosyllysine biosynthesis","type":"exact"},{"name":"fructosyllysine biosynthetic process","type":"exact"},{"name":"fructosyllysine formation","type":"exact"},{"name":"fructosyllysine synthesis","type":"exact"}],"termid":"GO:1901282"}


id: GO:1902693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of superoxide dismutase activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:10026301","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"superoxide dismutase complex","termid":"GO:1902693"}


id: PBO:0046213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 6","termid":"PBO:0046213"}


id: PBO:0057895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3198-2","termid":"PBO:0057895"}


id: GO:1905645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of FACT complex assembly.","definition_xrefs":["GO_REF:0000058","PMID:20889714","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of FACT complex assembly","termid":"GO:1905644"},{"relation_name":"negatively_regulates","term_name":"FACT complex assembly","termid":"GO:1905635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of FACT complex assembly","synonyms":[{"name":"down regulation of FACT complex assembly","type":"exact"},{"name":"down regulation of FACT complex formation","type":"exact"},{"name":"down regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"down regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"down-regulation of FACT complex assembly","type":"exact"},{"name":"down-regulation of FACT complex formation","type":"exact"},{"name":"down-regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"down-regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"downregulation of FACT complex assembly","type":"exact"},{"name":"downregulation of FACT complex formation","type":"exact"},{"name":"downregulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"downregulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"inhibition of FACT complex assembly","type":"narrow"},{"name":"inhibition of FACT complex formation","type":"narrow"},{"name":"inhibition of Facilitates chromatin transcription complex assembly","type":"narrow"},{"name":"inhibition of Facilitates chromatin transcription complex formation","type":"narrow"},{"name":"negative regulation of FACT complex formation","type":"exact"},{"name":"negative regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"negative regulation of Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905645"}


id: PBO:0080567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 2","termid":"PBO:0080567"}


id: GO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a tumor cell by a T cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["ISBN:0781735149","PMID:16730260","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"},{"relation_name":"is_a","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"T lymphocyte mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"T-cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"T-lymphocyte mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002419"}


id: PBO:0087688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the NuA4 histone acetyltransferase complex; NuA4 acetylates the N-terminal tails of histones H4 and H2A","termid":"PBO:0087688"}


id: GO:0045488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectin, a group of galacturonic acid-containing, water-soluble colloidal carbohydrates of high molecular weight and of net negative charge.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pectin metabolic process","synonyms":[{"name":"pectin metabolism","type":"exact"}],"termid":"GO:0045488"}


id: PBO:0058701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6829","termid":"PBO:0058701"}


id: GO:0018863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9(S),10(S)-dihydrodiolphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-9,10-epoxide hydrolase activity","termid":"GO:0019119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phenanthrene-9,10-epoxide hydrolase (9S,10S-forming) activity","termid":"GO:0018863"}


id: GO:2000815
data:
  {"annotated_genes":["SJAG_05014","SJAG_02573","SJAG_03886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86008,86405,87703],"is_not":false,"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"A process of regulation of mRNA stability that is involved in a response to oxidative stress.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability involved in response to stress","termid":"GO:0010610"},{"relation_name":"part_of","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03886":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA stability involved in response to oxidative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000815","terms_by_termid":{"GO:2000815":null}}


id: PBO:0067858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 160","termid":"PBO:0067858"}


id: PBO:0068646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 27, pseudogene","termid":"PBO:0068646"}


id: GO:0015947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane metabolic process","synonyms":[{"name":"methane metabolism","type":"exact"}],"termid":"GO:0015947"}


id: GO:0038091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of cell proliferation.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell proliferation","type":"narrow"},{"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell proliferation by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038091"}


id: SO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a mature protein region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_protein_region_of_CDS","synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"mature protein region of CDS","type":"exact"}],"termid":"SO:0002249"}


id: PBO:0060313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase 2","termid":"PBO:0060313"}


id: PBO:0053441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 387","termid":"PBO:0053441"}


id: GO:1990528
data:
  {"annotated_genes":["SJAG_00700","SJAG_00185"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103062,108049],"is_not":false,"summary":null,"term":"GO:1990528"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in endocytosis in the yeast S. cerevisiae.","definition_xrefs":["PMID:20610658","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Rvs161p-Rvs167p complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990528","terms_by_termid":{"GO:1990528":null}}


id: GO:0102216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + a maltodextrin = AMP + hydrogenphosphate + a 6-phosphogluco-maltodextrin.","definition_xrefs":["EC:2.7.9.4","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"maltodextrin water dikinase","secondary_identifiers":["MetaCyc:RXN-12201"],"termid":"GO:0102216"}


id: PBO:0079610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2H divergent transcript","termid":"PBO:0079610"}


id: PR:Q9P6L9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dentin sialophosphoprotein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C688.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.07c","secondary_identifiers":["UniProtKB:Q9P6L9"],"synonyms":[{"name":"Spom972h-DSPP","type":"exact"}],"termid":"PR:Q9P6L9"}


id: PBO:0072882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 1 pseudogene 1","termid":"PBO:0072882"}


id: GO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a symbiont organism mediated by a substance secreted by a host organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via secreted substance (obsolete GO:0052213)","synonyms":[{"name":"interaction with symbiont via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with symbiont via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052213"}


id: GO:0102094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a demethylmenaquinol = S-adenosyl-L-homocysteine + H+ + a menaquinol.","definition_xrefs":["GOC:pz","RHEA:26466","PMID:1444716","PMID:9045837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity","secondary_identifiers":["EC:2.1.1.163","MetaCyc:RXN-11046"],"termid":"GO:0102094"}


id: GO:0019926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-tryptophan to form tryptophan-6,7-dione, otherwise known as tryptophyl quinone, which is further modified by cross-linking to either tryptophan or cysteine.","definition_xrefs":["PMID:2028257","RESID:AA0148"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan oxidation to tryptophyl quinone (obsolete GO:0019926)","termid":"GO:0019926"}


id: GO:0035394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-X-C motif) ligand 9.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"regulation of CXCL9 production","type":"exact"},{"name":"regulation of MIG production","type":"exact"}],"termid":"GO:0035394"}


id: PBO:0039365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 1","termid":"PBO:0039365"}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: PBO:0057736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1324","termid":"PBO:0057736"}


id: GO:0004416
data:
  {"annotated_genes":["SJAG_01596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96490],"is_not":false,"summary":null,"term":"GO:0004416"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate.","definition_xrefs":["EC:3.1.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783221","MetaCyc:GLYOXII-RXN","RHEA:25245"],"synonyms":[{"name":"S-(2-hydroxyacyl)glutathione hydrolase activity","type":"related"},{"name":"S-2-hydroxylacylglutathione hydrolase activity","type":"related"},{"name":"acetoacetylglutathione hydrolase activity","type":"related"},{"name":"glyoxalase II activity","type":"related"}],"termid":"GO:0004416","terms_by_termid":{"GO:0004416":null}}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: PBO:0029886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_stress_granule_disassembly","termid":"PBO:0029886"}


id: PBO:0079113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 15 pseudogene 1","termid":"PBO:0079113"}


id: GO:0004007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heavy metal ion(in) + ATP + H2O = heavy metal ion(out) + ADP + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal-exporting ATPase activity (obsolete GO:0004007)","synonyms":[{"name":"heavy metal-exporting ATPase activity","type":"exact"}],"termid":"GO:0004007"}


id: PBO:0014606
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Fen2","termid":"PBO:0014606"}


id: GO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate determination","termid":"GO:0048664"}


id: PBO:0041225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf21 divergent transcript","termid":"PBO:0041225"}


id: PBO:0085054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; involved in signal transduction and the genotoxic response; induced rapidly in response to treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from ER to cytoplasm upon DNA replication stress; ECM3 has a paralog, YNL095C, that arose from the whole genome duplication","termid":"PBO:0085054"}


id: FYPO:0003639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cell wall biogenesis","synonyms":[{"name":"abolished fungal-type cell wall biogenesis","type":"exact"},{"name":"fungal-type cell wall biogenesis abolished","type":"exact"}],"termid":"FYPO:0003639"}


id: GO:0047496
data:
  {"annotated_genes":["SJAG_00594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100713],"is_not":false,"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:ecd","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based vesicle localization","type":"exact"}],"termid":"GO:0047496","terms_by_termid":{"GO:0047496":null}}


id: PBO:0059910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 33","termid":"PBO:0059910"}


id: FYPO:0006545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of one or more lipids in a cellular membrane is abnormal.","definition_xrefs":["PomBase:mah","GO:0097035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal membrane lipid distribution","synonyms":[{"name":"abnormal membrane lipid distribution during mitotic cell cycle","type":"related"},{"name":"abnormal membrane lipid distribution during vegetative growth","type":"exact"},{"name":"abnormal regulation of membrane lipid distribution","type":"exact"}],"termid":"FYPO:0006545"}


id: PBO:0108988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 4","termid":"PBO:0108988"}


id: PBO:0040336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 2","termid":"PBO:0040336"}


id: PBO:0088463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sororin, WAPL antagonist Sor1","termid":"PBO:0088463"}


id: GO:0075503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with a host macropinosome membrane, that occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host endosome membrane","termid":"GO:0039654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion of virus membrane with host macropinosome membrane","synonyms":[{"name":"viral entry into host cell via macropinocytosis followed by membrane fusion with the endosome membrane","type":"exact"},{"name":"viral entry into host cell via macropinocytosis followed by membrane fusion with the host macropinosome membrane","type":"related"}],"termid":"GO:0075503"}


id: PBO:0063744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 9","termid":"PBO:0063744"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: MOD:00005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O3-glycosylthreonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-glycosyl-L-threonine","synonyms":[{"name":"OGlycoThr","type":"exact"}],"termid":"MOD:00005"}


id: PBO:0060246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 1","termid":"PBO:0060246"}


id: GO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of central tolerance induction","termid":"GO:0002647"},{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"negatively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell tolerance induction","synonyms":[{"name":"down regulation of central B cell tolerance induction","type":"exact"},{"name":"down-regulation of central B cell tolerance induction","type":"exact"},{"name":"downregulation of central B cell tolerance induction","type":"exact"},{"name":"inhibition of central B cell tolerance induction","type":"narrow"}],"termid":"GO:0002896"}


id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: GO:1900216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["GOC:TermGenie","GOC:mtg_kidney_jan10","PMID:17314325","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric collecting duct development","termid":"GO:1900214"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"activation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic process involved in metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"activation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"activation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"positive regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up-regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"upregulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900216"}


id: PBO:0072977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 1, pseudogene","termid":"PBO:0072977"}


id: GO:0060153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus interferes with the normal progression through the host cell cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host cell cycle progression (obsolete GO:0060153)","synonyms":[{"name":"modulation by virus of host cell cycle","type":"related"},{"name":"modulation of host cell cycle by virus","type":"exact"},{"name":"regulation by virus of host cell cycle","type":"exact"},{"name":"regulation of host cell cycle by virus","type":"exact"},{"name":"viral process regulating host cell cycle","type":"exact"}],"termid":"GO:0060153"}


id: FYPO:0002238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cerulenin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cerulenin","synonyms":[{"name":"normal cell population growth in presence of cerulenin","type":"exact"},{"name":"normal cell population growth on cerulenin","type":"exact"},{"name":"normal cellular response to cerulenin","type":"related"},{"name":"normal vegetative cell population growth on cerulenin","type":"exact"}],"termid":"FYPO:0002238"}


id: PBO:0041983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 27","termid":"PBO:0041983"}


id: GO:1902079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-valine.","definition_xrefs":["GOC:TermGenie","PMID:23085840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine catabolic process","termid":"GO:0006574"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-valine metabolic process","termid":"GO:1902114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-valine catabolic process","synonyms":[{"name":"D-valine breakdown","type":"exact"},{"name":"D-valine catabolism","type":"exact"},{"name":"D-valine degradation","type":"exact"}],"termid":"GO:1902079"}


id: PBO:0029981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029981"}


id: PBO:0054328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1721","termid":"PBO:0054328"}


id: PBO:0047708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 2","termid":"PBO:0047708"}


id: PBO:0090275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit, dynamitin Jnm1","termid":"PBO:0090275"}


id: PBO:0064396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNISR antisense RNA 1","termid":"PBO:0064396"}


id: PBO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha and beta receptor subunit 1","termid":"PBO:0050949"}


id: PBO:0060087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 34","termid":"PBO:0060087"}


id: PBO:0076285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor pseudogene 2","termid":"PBO:0076285"}


id: GO:0000755
data:
  {"annotated_genes":["SJAG_02878","SJAG_02924","SJAG_02351","SJAG_04887","SJAG_01943","SJAG_04982","SJAG_00870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88694,93901],"is_not":false,"summary":null,"term":"GO:0000755"},{"annotations":[106381,97363,88537,91470,92547],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"During conjugation with cellular fusion, the process resulting in creating a single cell from complementary mating types. The localized remodeling and dissolution of external protective structures allow the fusion of the plasma membranes and cytoplasmic mixing. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_01943":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"cytogamy","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030462","GO:0000218"],"synonyms":[{"name":"zygote formation","type":"related"}],"termid":"GO:0000755","terms_by_termid":{"GO:0000755":null,"GO:0032220":null}}


id: PBO:0055414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2844","termid":"PBO:0055414"}


id: GO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"JUN kinase binding","synonyms":[{"name":"JNK binding","type":"exact"}],"termid":"GO:0008432"}


id: GO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class II protein complex.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"MHC class II protein complex assembly","termid":"GO:0002399"}


id: SO:1000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When no simple or well defined DNA mutation event describes the observed DNA change, the keyword \\\"complex\\\" should be used. Usually there are multiple equally plausible explanations for the change.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_substitution","synonyms":[{"name":"complex substitution","type":"exact"}],"termid":"SO:1000005"}


id: GO:0007131
data:
  {"annotated_genes":["SJAG_04205","SJAG_02556","SJAG_03221","SJAG_04950","SJAG_05295","SJAG_00980","SJAG_01138","SJAG_01076","SJAG_01677","SJAG_02822","SJAG_01708","SJAG_00100","SJAG_03720","SJAG_02294","SJAG_03567","SJAG_00172","SJAG_02311","SJAG_05373","SJAG_02490","SJAG_03525","SJAG_04748","SJAG_01044","SJAG_02652","SJAG_03751","SJAG_02708","SJAG_00727","SJAG_00266","SJAG_03219","SJAG_00908","SJAG_02339","SJAG_05333","SJAG_02460","SJAG_01419","SJAG_00757","SJAG_01156","SJAG_04303","SJAG_03438","SJAG_02267","SJAG_01410","SJAG_00935","SJAG_03048","SJAG_00623","SJAG_02616","SJAG_07002","SJAG_02592","SJAG_02465","SJAG_02181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84777,85276,85504,85803,86496,86545,87004,87655,88859,88936,89421,90924,93100,96711,96744,96808,97689,100044,100498,101013,101041,102900,103850,104153,107306,111694,113255,114887],"is_not":false,"summary":null,"term":"GO:0007131"},{"annotations":[104147],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[112960,103844,95227,84770,85375],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[86544,105840,104930,101040,107305],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[103846,106487],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[106488,103847,84710,97687,89058,96708,93099,113251],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[96709,84711,89059],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[104150],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[98549,104538],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[85275],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[85382,90556,112451],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[114888,113588,104329,102363,113257,113440,105272,97691,106511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[112403],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a single or double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.","definition_xrefs":["PMID:2087779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reciprocal homologous recombination","termid":"GO:0140527"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00266":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02181":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03438":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_04205":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0008150","GO:0006259","GO:0140013"],"is_obsolete":false,"name":"reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000021","GO:0007145"],"synonyms":[{"name":"female meiotic recombination","type":"narrow"},{"name":"gene conversion with reciprocal crossover","type":"exact"}],"termid":"GO:0007131","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0007131":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: PBO:0039136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune regulator","termid":"PBO:0039136"}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_02068","SJAG_04790","SJAG_00158"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99532,100170,111240],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a steryl ester + H2O = a sterol + a fatty acid.","definition_xrefs":["EC:3.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"sterol esterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6813720","Reactome:R-HSA-192417","Reactome:R-HSA-8865667","MetaCyc:STEROL-ESTERASE-RXN","RHEA:10100"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: GO:1904057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of pain.","definition_xrefs":["PMID:17167094","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of sensory perception of pain","termid":"GO:0051930"},{"relation_name":"negatively_regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of pain","synonyms":[{"name":"down regulation of nociception","type":"exact"},{"name":"down regulation of perception of physiological pain","type":"narrow"},{"name":"down regulation of sensory perception of pain","type":"exact"},{"name":"down-regulation of nociception","type":"exact"},{"name":"down-regulation of perception of physiological pain","type":"narrow"},{"name":"down-regulation of sensory perception of pain","type":"exact"},{"name":"downregulation of nociception","type":"exact"},{"name":"downregulation of perception of physiological pain","type":"narrow"},{"name":"downregulation of sensory perception of pain","type":"exact"},{"name":"inhibition of nociception","type":"narrow"},{"name":"inhibition of perception of physiological pain","type":"narrow"},{"name":"inhibition of sensory perception of pain","type":"narrow"},{"name":"negative regulation of nociception","type":"exact"},{"name":"negative regulation of perception of physiological pain","type":"narrow"}],"termid":"GO:1904057"}


id: GO:2000266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, intrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, intrinsic pathway","termid":"GO:0007597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"regulation of blood coagulation, intrinsic pathway","termid":"GO:2000266"}


id: FYPO:0005351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a guanyl-nucleotide exchange factor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased guanyl-nucleotide exchange factor activity","synonyms":[{"name":"increased GEF activity","type":"exact"}],"termid":"FYPO:0005351"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: PBO:0085593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; Bud14p-Glc7p complex is a cortical regulator of dynein; forms a complex with Kel1p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085593"}


id: FYECO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was carried out in vitro.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in vitro","termid":"FYECO:0000140"}


id: PBO:0068080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 386","termid":"PBO:0068080"}


id: GO:0006851
data:
  {"annotated_genes":["SJAG_03399","SJAG_03873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93535,91817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"}]},"cv_name":"biological_process","definition":"The process in which a calcium ion (Ca2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03399":null,"SJAG_03873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"mitochondrial calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial calcium transport","type":"exact"}],"termid":"GO:0006851","terms_by_termid":{"GO:0036444":null}}


id: PBO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant alpha 1","termid":"PBO:0051040"}


id: GO:0007081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic sister-chromatid adhesion release (obsolete GO:0007081)","synonyms":[{"name":"mitotic sister-chromatid adhesion release","type":"exact"}],"termid":"GO:0007081"}


id: FYPO:0005576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is decreased during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin during meiotic cell cycle","synonyms":[{"name":"decreased protein localisation to chromatin during meiotic cell cycle","type":"exact"},{"name":"reduced protein localization to chromatin during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005576"}


id: GO:0008538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["PMID:10428771","GOC:rn"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome activator activity (obsolete GO:0008538)","synonyms":[{"name":"PA28","type":"narrow"},{"name":"proteasome activator activity","type":"exact"}],"termid":"GO:0008538"}


id: GO:0036470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of tyrosine 3-monooxygenase (tyrosine hydroxylase).","definition_xrefs":["GOC:PARL","PMID:19703902","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"tyrosine 3-monooxygenase activator activity","synonyms":[{"name":"TH activator activity","type":"exact"},{"name":"tyrosine hydroxylase activator activity","type":"exact"}],"termid":"GO:0036470"}


id: GO:0050397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Watasenia luciferin + O2 = oxidized Watasenia luciferin + CO2 + light.","definition_xrefs":["EC:1.13.12.8","MetaCyc:WATASEMIA-LUCIFERIN-2-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"Watasenia-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:18057"],"synonyms":[{"name":"Watasenia-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Watasenia-type luciferase activity","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0050397"}


id: internal:obsolete_name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsolete_name","termid":"internal:obsolete_name"}


id: PBO:0061788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulatory transmembrane protein","termid":"PBO:0061788"}


id: FYPO:0002221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through the anaphase of meiosis II is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of meiotic anaphase II","synonyms":[{"name":"delayed meiotic anaphase II progression","type":"related"},{"name":"increased duration of meiotic anaphase II progression","type":"exact"},{"name":"prolonged meiotic anaphase II","type":"exact"}],"termid":"FYPO:0002221"}


id: PR:Q10203
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D1.05 gene.","definition_xrefs":["UniProtKB:Q10203","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.05","synonyms":[{"name":"Spom972h-SPBC17D1.05","type":"exact"}],"termid":"PR:Q10203"}


id: FYPO:0000994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphatidylinositol-4-phosphate level","termid":"FYPO:0001015"},{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"increased cellular PI-4-P level","type":"exact"},{"name":"increased PI-4-P accumulation","type":"related"},{"name":"increased cellular PI(4)P level","type":"exact"},{"name":"increased cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000994"}


id: GO:0102442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: syringetin(1-) + S-adenosyl-L-methionine = 3,3',5'-trimethylmyricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"syringetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13920"],"termid":"GO:0102442"}


id: SO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of peptide with secondary structure has hydrogen bonding along the peptide chain that causes a defined conformation of the chain.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_secondary_structure","secondary_identifiers":["http://en.wikipedia.org/wiki/Secondary_structure","BS:00003"],"synonyms":[{"name":"2nary structure","type":"related"},{"name":"polypeptide secondary structure","type":"exact"},{"name":"secondary structure","type":"related"},{"name":"secondary structure region","type":"related"},{"name":"secondary_structure","type":"related"}],"termid":"SO:0001078"}


id: PBO:0047841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast proliferation associated lncRNA","termid":"PBO:0047841"}


id: GO:1902170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive nitrogen species stimulus.","definition_xrefs":["GOC:sl","PMID:22504638","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reactive nitrogen species","secondary_identifiers":["GO:1990106"],"termid":"GO:1902170"}


id: PBO:0026858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex_assembly","termid":"PBO:0026858"}


id: PBO:0086200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; null mutation results in a decrease in plasma membrane electron transport","termid":"PBO:0086200"}


id: GO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate = NADH + CO2 + catechol.","definition_xrefs":["MetaCyc:1.3.1.25-RXN","EC:1.3.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase activity","secondary_identifiers":["RHEA:11560"],"synonyms":[{"name":"(1R,6R)-1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"2-hydro-1,2-dihydroxybenzoate dehydrogenase activity","type":"related"},{"name":"3,5-cyclohexadiene-1,2-diol-1-carboxylate dehydrogenase activity","type":"related"},{"name":"3,5-cyclohexadiene-1,2-diol-1-carboxylic acid dehydrogenase activity","type":"related"},{"name":"DHB dehydrogenase activity","type":"related"},{"name":"DHBDH activity","type":"related"},{"name":"cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate:NAD(+) oxidoreductase activity","type":"related"},{"name":"cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"dihydrodihydroxybenzoate dehydrogenase activity","type":"related"}],"termid":"GO:0047116"}


id: PBO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside phosphorylase (predicted)","termid":"PBO:0001739"}


id: GO:0023070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the air.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via air (obsolete GO:0023070)","synonyms":[{"name":"signal transmission via air","type":"exact"}],"termid":"GO:0023070"}


id: GO:0048600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an oocyte.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"oocyte differentiation","termid":"GO:0009994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte fate commitment","termid":"GO:0048600"}


id: GO:0009214
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"cyclic nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cyclic nucleotide breakdown","type":"exact"},{"name":"cyclic nucleotide catabolism","type":"exact"},{"name":"cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0009214","terms_by_termid":{"GO:0006198":null}}


id: FYPO:0002277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001283"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"},{"relation_name":"is_a","term_name":"abnormal protein degradation during nitrogen starvation","termid":"FYPO:0002796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased protein degradation during nitrogen starvation","synonyms":[{"name":"increased protein breakdown during nitrogen starvation","type":"exact"},{"name":"increased protein catabolic process during nitrogen starvation","type":"exact"},{"name":"increased protein catabolism during nitrogen starvation","type":"exact"},{"name":"increased protein degradation during nitrogen depletion","type":"exact"},{"name":"increased protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002277"}


id: GO:0032221
data:
  {"annotated_genes":["SJAG_00349","SJAG_03884","SJAG_01110","SJAG_00581","SJAG_01804","SJAG_04758"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86002,89963,90482,91629,92065,105654],"is_not":false,"summary":null,"term":"GO:0032221"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved histone deacetylase complex which deacetylates histones across gene coding regions. Composed of a catalytic histone deacetylase subunit, a chromodomain protein, a SIN3 family co-repressor, and a WD repeat protein (Clr6p, Alp13p, Pst2p, and Prw1p respectively in Schizosaccharomyces; Rpd3p, Sin3p, Ume1p, Rco1p and Eaf3 in Saccharomyces; homologs thereof in other species).","definition_xrefs":["PMID:12773392","GOC:vw","PMID:17450151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00581":null,"SJAG_01110":null,"SJAG_01804":null,"SJAG_03884":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694","GO:0005654"],"is_obsolete":false,"name":"Rpd3S complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000509"],"synonyms":[{"name":"Clr6 histone deacetylase complex II","type":"exact"},{"name":"Clr6 histone deacetylase complex II'","type":"exact"},{"name":"Clr6-CII complex","type":"exact"},{"name":"Clr6S complex","type":"exact"},{"name":"Rpd3C(S)","type":"exact"},{"name":"Rpd3S","type":"exact"},{"name":"Sin3S","type":"exact"}],"termid":"GO:0032221","terms_by_termid":{"GO:0032221":null}}


id: PBO:0077702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C1, slow skeletal and cardiac type","termid":"PBO:0077702"}


id: PBO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA(Gln) amidotransferase complex subunit Gtf1 (predicted)","termid":"PBO:0017087"}


id: GO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + NH3 = AMP + diphosphate + L-asparagine.","definition_xrefs":["EC:6.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia ligase activity","termid":"GO:0016211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aspartate-ammonia ligase activity","secondary_identifiers":["MetaCyc:ASNSYNA-RXN","RHEA:11372"],"synonyms":[{"name":"L-asparagine synthetase activity","type":"related"},{"name":"L-aspartate:ammonia ligase (AMP-forming)","type":"related"},{"name":"asparagine synthetase activity","type":"related"}],"termid":"GO:0004071"}


id: GO:0072493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endosome lumen","synonyms":[{"name":"host endosome lumen","type":"exact"}],"termid":"GO:0072493"}


id: GO:1905673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysosome organization.","definition_xrefs":["PMID:25561470","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"is_a","term_name":"regulation of lysosome organization","termid":"GO:1905671"},{"relation_name":"positively_regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lysosome organization","synonyms":[{"name":"activation of lysosome organisation","type":"narrow"},{"name":"activation of lysosome organization","type":"narrow"},{"name":"activation of lysosome organization and biogenesis","type":"related"},{"name":"positive regulation of lysosome organisation","type":"exact"},{"name":"positive regulation of lysosome organization and biogenesis","type":"related"},{"name":"up regulation of lysosome organisation","type":"exact"},{"name":"up regulation of lysosome organization","type":"exact"},{"name":"up regulation of lysosome organization and biogenesis","type":"related"},{"name":"up-regulation of lysosome organisation","type":"exact"},{"name":"up-regulation of lysosome organization","type":"exact"},{"name":"up-regulation of lysosome organization and biogenesis","type":"related"},{"name":"upregulation of lysosome organisation","type":"exact"},{"name":"upregulation of lysosome organization","type":"exact"},{"name":"upregulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905673"}


id: GO:0008785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octane hydroperoxide + NADH + H+ = H2O + NAD+ + 1-octanol.","definition_xrefs":["UM-BBD_reactionID:r0684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alkyl hydroperoxide reductase activity","secondary_identifiers":["Reactome:R-HSA-1222526"],"termid":"GO:0008785"}


id: GO:0034275
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034276"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving kynurenic acid, 4-hydroxyquinoline-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kynurenic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4-hydroxyquinoline-2-carboxylic acid metabolic process","type":"exact"},{"name":"kynurenic acid metabolism","type":"exact"}],"termid":"GO:0034275","terms_by_termid":{"GO:0034276":null}}


id: PBO:0078555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43C, pseudogene","termid":"PBO:0078555"}


id: GO:1902763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["PMID:16575901","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"negatively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic skeletal joint development","synonyms":[{"name":"down regulation of embryonic skeletal joint development","type":"exact"},{"name":"down-regulation of embryonic skeletal joint development","type":"exact"},{"name":"downregulation of embryonic skeletal joint development","type":"exact"},{"name":"inhibition of embryonic skeletal joint development","type":"narrow"}],"termid":"GO:1902763"}


id: GO:0047030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxycyclohexanecarboxylate + NAD+ = 4-oxocyclohexanecarboxylate + H+ + NADH.","definition_xrefs":["RHEA:17429","EC:1.1.1.226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04307","MetaCyc:1.1.1.226-RXN"],"synonyms":[{"name":"trans-4-hydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"},{"name":"trans-4-hydroxycyclohexanecarboxylate:NAD+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0047030"}


id: PBO:0074513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A5","termid":"PBO:0074513"}


id: PBO:0068518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 112, pseudogene","termid":"PBO:0068518"}


id: PBO:0047007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A10","termid":"PBO:0047007"}


id: PBO:0027274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_elongation_from_RNA_polymerase_II_promoter","termid":"PBO:0027274"}


id: FYPO:0004387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:14766746","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"decreased activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"decreased positive regulation of DNA polymerase activity","type":"broad"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of DNA-directed DNA polymerase activity","type":"exact"}],"termid":"FYPO:0004387"}


id: PBO:0060130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 31","termid":"PBO:0060130"}


id: PR:000030002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"Spom-CHEK2","type":"exact"}],"termid":"PR:000030002"}


id: PBO:0058473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5581","termid":"PBO:0058473"}


id: GO:0061321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a garland nephrocyte. A garland nephrocyte is an insect renal cell that filters hemolymph and forms a ring with other garland nephrocytes around the esophagus. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","GOC:sart","PMID:19783135","CL:0000486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"garland nephrocyte differentiation","secondary_identifiers":["GO:0007514"],"synonyms":[{"name":"garland cell differentiation","type":"exact"}],"termid":"GO:0061321"}


id: GO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytochelatin-metal-sulfur complex formation","synonyms":[{"name":"HWM phytochelatin complex formation","type":"related"},{"name":"high molecular weight phytochelatin complex formation","type":"related"}],"termid":"GO:0090424"}


id: PR:Q9USV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase component (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.08c","synonyms":[{"name":"Spom972h-hrd3","type":"exact"}],"termid":"PR:Q9USV0"}


id: PBO:0018130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain endoplasmic reticulum membrane organization protein (predicted)","termid":"PBO:0018130"}


id: PBO:0057727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-11","termid":"PBO:0057727"}


id: PBO:0040476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1","termid":"PBO:0040476"}


id: MOD:00531
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid with one (18)O as the result of having been deglycosylated in (18)O water.","definition_xrefs":["PubMed:14435542","Unimod:170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated L-asparagine","termid":"MOD:01293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deglycosylated asparagine","synonyms":[{"name":"Delta:H(1)O(-1)18O(1)","type":"related"},{"name":"glycosylated asparagine 18O labeling","type":"related"}],"termid":"MOD:00531"}


id: PR:Q9HGQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC212.01c/SPBCPT2R1.04c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C212.01c/CPT2R1.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.04c","synonyms":[{"name":"Spom972h-SPBCPT2R1.04c","type":"exact"}],"termid":"PR:Q9HGQ1"}


id: PBO:0016566
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Unidentified Cyclin","termid":"PBO:0016566"}


id: PBO:0035974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acetaldehyde","termid":"PBO:0035974"}


id: FYPO:0006441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"increased protein kinase activity during cellular response to HU","type":"exact"}],"termid":"FYPO:0006441"}


id: GO:0052226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in a second organism resulting in the formation of substances, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis of substance in other organism involved in symbiotic interaction (obsolete GO:0052226)","synonyms":[{"name":"biosynthesis of substance in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052226"}


id: PBO:0085272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal importomer complex component; integral peroxisomal membrane protein required for docking and translocation of peroxisomal matrix proteins; interacts with the PTS1 signal recognition factor Pex5p and the PTS2 signal recognition factor Pex7p; forms a complex with Pex14p and Pex17p; human homolog PEX13 complements yeast null mutant","termid":"PBO:0085272"}


id: PBO:0027572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitotic_interphase","termid":"PBO:0027572"}


id: PBO:0058127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4429","termid":"PBO:0058127"}


id: PBO:0054468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1867","termid":"PBO:0054468"}


id: PBO:0028054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_horsetail_movement","termid":"PBO:0028054"}


id: PBO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed from ncRNA to protein 20151128","termid":"PBO:0025457"}


id: GO:0061085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 methylation (obsolete GO:0061085)","termid":"GO:0061085"}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: PBO:0068424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1","termid":"PBO:0068424"}


id: FYPO:0002531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm","synonyms":[{"name":"abolished protein localisation to nucleoplasm","type":"exact"},{"name":"abolished protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished","type":"exact"}],"termid":"FYPO:0002531"}


id: FYPO:0000891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H3-K9 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H3-K9 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000891"}


id: PBO:0068071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 376","termid":"PBO:0068071"}


id: PBO:0083310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF ARG5,6/YER069W","termid":"PBO:0083310"}


id: PBO:0091633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent aldo/keto reductase, unknown biological role, implicated in cellular detoxification","termid":"PBO:0091633"}


id: PBO:0073038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCUBE1 antisense RNA 2","termid":"PBO:0073038"}


id: PBO:0064048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 82","termid":"PBO:0064048"}


id: GO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell becomes committed to becoming a CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"is_a","term_name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","termid":"GO:0043369"},{"relation_name":"part_of","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0043373"}


id: PBO:0063241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 6","termid":"PBO:0063241"}


id: PBO:0044411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 2, pseudogene","termid":"PBO:0044411"}


id: GO:0097595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure horizontally linking adjacent microribbons of the ventral disc in Giardia species (trophozoite stage). The composition of crossbridges is not fully known yet.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc crossbridge","synonyms":[{"name":"crossbridge","type":"broad"},{"name":"ventral disk crossbridge","type":"related"}],"termid":"GO:0097595"}


id: FYPO:0003117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal during a cellular response to plumbagin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to plumbagin","synonyms":[{"name":"increased ROS accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular ROS level during cellular response to plumbagin","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to plumbagin during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to plumbagin during vegetative growth","type":"exact"}],"termid":"FYPO:0003117"}


id: FYECO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amino acids were transiently removed from medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ limited nitrogen","termid":"FYECO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient amino acid starvation < 1 hour","termid":"FYECO:0000401"}


id: FYPO:0003501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, is normal length, and contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0005447"],"is_obsolete":false,"name":"inviable aseptate mononucleate vegetative cell, normal cell length","synonyms":[{"name":"inviable aseptate mononucleate cell, normal cell length, during vegetative growth","type":"exact"},{"name":"inviable aseptate mononucleate vegetative cell, normal cell length during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell, normal cell length","type":"exact"},{"name":"inviable unseptated mononucleate vegetative cell with normal cell length","type":"exact"},{"name":"lethal; aseptate mononucleate vegetative cell, normal cell length","type":"exact"}],"termid":"FYPO:0003501"}


id: PBO:0075110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 159","termid":"PBO:0075110"}


id: PBO:0078036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 26","termid":"PBO:0078036"}


id: PBO:0038738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 10","termid":"PBO:0038738"}


id: PBO:0016938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces specific protein","termid":"PBO:0016938"}


id: PBO:0076694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A N-terminal and central domain containing","termid":"PBO:0076694"}


id: PBO:0052430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIZ antisense RNA 1","termid":"PBO:0052430"}


id: PBO:0017489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-never_in_taxon","termid":"PBO:0017489"}


id: PBO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (predicted)","termid":"PBO:0001881"}


id: GO:0060552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of fructose 1,6-bisphosphate metabolism. Fructose 1,6-bisphosphate metabolism is the chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"regulation of fructose 1,6-bisphosphate metabolic process","termid":"GO:0060551"},{"relation_name":"positively_regulates","term_name":"fructose 1,6-bisphosphate metabolic process","termid":"GO:0030388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fructose 1,6-bisphosphate metabolic process","termid":"GO:0060552"}


id: GO:0034406
data:
  {"annotated_genes":["SJAG_01171","SJAG_03705","SJAG_03587","SJAG_01835","SJAG_02192","SJAG_04666","SJAG_00218","SJAG_04483","SJAG_01453","SJAG_04771","SJAG_01288","SJAG_05001","SJAG_01290","SJAG_00876","SJAG_03646","SJAG_00610","SJAG_04462","SJAG_04668","SJAG_01787","SJAG_03123","SJAG_05285","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[84302,87774,111982,103958,109348,105491,87764,102271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98811,104797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[98114,104249,91282,98113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[88604,83750],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[99019,101510,88590,86971,88606,114037],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034406","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PR:Q10206
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthamide biosynthesis protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10762:SF2","OMA:SCHPO03661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.02","secondary_identifiers":["UniProtKB:Q10206"],"synonyms":[{"name":"Spom972h-DPH2","type":"exact"}],"termid":"PR:Q10206"}


id: GO:1903079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of protein localization to cell tip that is involved in positive regulation of establishment of cell polarity regulating cell shape.","definition_xrefs":["PMID:24554432","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape (obsolete GO:1903079)","synonyms":[{"name":"down regulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"down regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"down-regulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"down-regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"downregulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"downregulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"inhibition of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"narrow"},{"name":"inhibition of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"narrow"},{"name":"negative regulation of protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"negative regulation of protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"}],"termid":"GO:1903079"}


id: PR:Q9UTA3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A minor histocompatibility antigen H13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12174:SF23","OMA:SCHPO01737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramembrane protease C25B8.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.17","secondary_identifiers":["UniProtKB:Q9UTA3"],"synonyms":[{"name":"Spom972h-HM13","type":"exact"}],"termid":"PR:Q9UTA3"}


id: GO:0006000
data:
  {"annotated_genes":["SJAG_02713","SJAG_00039","SJAG_04334","SJAG_02596","SJAG_03336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85187,89042,90702,96102,97539],"is_not":false,"summary":null,"term":"GO:0006000"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null,"SJAG_04334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fructose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fructose"],"synonyms":[{"name":"fructose metabolism","type":"exact"}],"termid":"GO:0006000","terms_by_termid":{"GO:0006000":null}}


id: PBO:0071261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 6","termid":"PBO:0071261"}


id: GO:0006190
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104683],"is_not":false,"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"Any process that generates inosine, hypoxanthine riboside, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside salvage","termid":"GO:0006166"},{"relation_name":"is_a","term_name":"inosine biosynthetic process","termid":"GO:0046103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"inosine salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"related"},{"name":"guanine, xanthine and their nucleoside salvage","type":"related"}],"termid":"GO:0006190","terms_by_termid":{"GO:0006190":null}}


id: PBO:0029881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methylated_histone_residue_binding","termid":"PBO:0029881"}


id: PBO:0051122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-9 (non-functional)","termid":"PBO:0051122"}


id: PBO:0036242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex (poly(A)-specific ribonuclease) ubiquitin C-terminal hydrolase subunit Pan2 (predicted)","termid":"PBO:0036242"}


id: GO:0032395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class II protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"MHC class II receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032395"}


id: GO:0048257
data:
  {"annotated_genes":["SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113258],"is_not":false,"summary":null,"term":"GO:0048257"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a 3' flap structure in DNA, but not other DNA structures; processes the 3' ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid","PMID:10635319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"},{"relation_name":"is_a","term_name":"flap endonuclease activity","termid":"GO:0048256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"3'-flap endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3' flap endonuclease activity","type":"exact"}],"termid":"GO:0048257","terms_by_termid":{"GO:0048257":null}}


id: PR:O94341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1271.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.08c","synonyms":[{"name":"Spom972h-SPBC1271.08c","type":"exact"}],"termid":"PR:O94341"}


id: PBO:0084111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein that is highly induced upon stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the HSP70 family; cytoplasmic protein that concentrates in nuclei upon starvation; SSA4 has a paralog, SSA3, that arose from the whole genome duplication","termid":"PBO:0084111"}


id: PBO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vegetative_cell_population_growth","termid":"PBO:0030878"}


id: PBO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 20","termid":"PBO:0070841"}


id: PBO:0051707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase J","termid":"PBO:0051707"}


id: PBO:0065761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridine nucleotide-disulphide oxidoreductase domain 1","termid":"PBO:0065761"}


id: PBO:0086287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in chromosomal DNA replication; interacts with Sld3p and reduces its affinity for Cdc45p; deletion mutant has aberrant mitochondria; ortholog of human MTBP, which is a DNA replication origin firing factor","termid":"PBO:0086287"}


id: FYPO:0004674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to dimethyl sulfoxide. Cells stop growing (and may die) at a concentration of dimethyl sulfoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to dimethyl sulfoxide","synonyms":[{"name":"hypersensitive to dimethyl sulfoxide","type":"exact"},{"name":"sensitive to DMSO","type":"exact"},{"name":"sensitive to dimethyl sulfoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to dimethyl sulfoxide during vegetative growth","type":"exact"},{"name":"sensitive to dimethyl sulphoxide","type":"exact"}],"termid":"FYPO:0004674"}


id: GO:1904367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of chemokinesis","termid":"GO:1904365"},{"relation_name":"positively_regulates","term_name":"chemokinesis","termid":"GO:0042466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokinesis","synonyms":[{"name":"activation of chemokinesis","type":"narrow"},{"name":"up regulation of chemokinesis","type":"exact"},{"name":"up-regulation of chemokinesis","type":"exact"},{"name":"upregulation of chemokinesis","type":"exact"}],"termid":"GO:1904367"}


id: GO:1900092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"negatively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of raffinose biosynthetic process","synonyms":[{"name":"down regulation of raffinose anabolism","type":"exact"},{"name":"down regulation of raffinose biosynthesis","type":"exact"},{"name":"down regulation of raffinose biosynthetic process","type":"exact"},{"name":"down regulation of raffinose formation","type":"exact"},{"name":"down regulation of raffinose synthesis","type":"exact"},{"name":"down-regulation of raffinose anabolism","type":"exact"},{"name":"down-regulation of raffinose biosynthesis","type":"exact"},{"name":"down-regulation of raffinose biosynthetic process","type":"exact"},{"name":"down-regulation of raffinose formation","type":"exact"},{"name":"down-regulation of raffinose synthesis","type":"exact"},{"name":"downregulation of raffinose anabolism","type":"exact"},{"name":"downregulation of raffinose biosynthesis","type":"exact"},{"name":"downregulation of raffinose biosynthetic process","type":"exact"},{"name":"downregulation of raffinose formation","type":"exact"},{"name":"downregulation of raffinose synthesis","type":"exact"},{"name":"inhibition of raffinose anabolism","type":"exact"},{"name":"inhibition of raffinose biosynthesis","type":"exact"},{"name":"inhibition of raffinose biosynthetic process","type":"narrow"},{"name":"inhibition of raffinose formation","type":"exact"},{"name":"inhibition of raffinose synthesis","type":"exact"},{"name":"negative regulation of raffinose anabolism","type":"exact"},{"name":"negative regulation of raffinose biosynthesis","type":"exact"},{"name":"negative regulation of raffinose formation","type":"exact"},{"name":"negative regulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900092"}


id: PBO:0049528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ2 divergent transcript","termid":"PBO:0049528"}


id: PBO:0053762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1004","termid":"PBO:0053762"}


id: GO:0008947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Xaa-Yaa in which both Xaa and Yaa are Arg or Lys.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete omptin activity (obsolete GO:0008947)","synonyms":[{"name":"omptin activity","type":"exact"}],"termid":"GO:0008947"}


id: PBO:0086780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the vacuole","termid":"PBO:0086780"}


id: PBO:0075636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2F","termid":"PBO:0075636"}


id: PBO:0065379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 7","termid":"PBO:0065379"}


id: GO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Downregulation of MAP kinase activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (mating sensu Saccharomyces) (obsolete GO:0000174)","synonyms":[{"name":"inactivation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000174"}


id: GO:0010752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cGMP-mediated signaling","synonyms":[{"name":"regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010752"}


id: FYPO:0006886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0000120","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"increased protein level at mitotic spindle","synonyms":[{"name":"increased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"increased protein level in mitotic spindle","type":"exact"},{"name":"protein accumulation at mitotic spindle","type":"exact"}],"termid":"FYPO:0006886"}


id: PR:O74799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.05","synonyms":[{"name":"Exo-1,3-beta-glucanase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-exg3","type":"exact"}],"termid":"PR:O74799"}


id: GO:0071184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-a1, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-a1 complex","synonyms":[{"name":"Pcdhga1-Pcdha4 complex","type":"narrow"}],"termid":"GO:0071184"}


id: GO:0018420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via N6-(L-isoaspartyl)-L-lysine (obsolete GO:0018420)","termid":"GO:0018420"}


id: GO:0015443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out).","definition_xrefs":["EC:3.6.3.15"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-transporting two-sector ATPase activity (obsolete GO:0015443)","synonyms":[{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0015443"}


id: GO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"positive regulation of TLR4 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034145"}


id: PBO:0078541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 33","termid":"PBO:0078541"}


id: PBO:0057141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219b","termid":"PBO:0057141"}


id: GO:0102723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + curcumin = curcumin monoglucoside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose:curcumin glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7062"],"termid":"GO:0102723"}


id: PBO:0087682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, polyadenylation and poly(A) site recognition, 43% similarity with the mammalian CPSF-100 protein.","termid":"PBO:0087682"}


id: FYPO:0005603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint","termid":"FYPO:0002341"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"delayed mitotic DNA damage checkpoint deactivation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"prolonged mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005603"}


id: GO:1900980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenazine biosynthetic process","synonyms":[{"name":"regulation of acridizine biosynthesis","type":"related"},{"name":"regulation of acridizine biosynthetic process","type":"related"},{"name":"regulation of azophenylene biosynthesis","type":"related"},{"name":"regulation of azophenylene biosynthetic process","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900980"}


id: GO:1904563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol 5-phosphate.","definition_xrefs":["GOC:TermGenie","GOC:pad","GO_REF:0000068","GOC:PARL","PMID:23916588","GOC:autophagy","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"},{"relation_name":"is_a","term_name":"phosphatidylinositol 5-phosphate metabolic process","termid":"GO:1904562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol 5-phosphate biosynthetic process","synonyms":[{"name":"phosphatidylinositol 5-phosphate anabolism","type":"exact"},{"name":"phosphatidylinositol 5-phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol 5-phosphate formation","type":"exact"},{"name":"phosphatidylinositol 5-phosphate synthesis","type":"exact"}],"termid":"GO:1904563"}


id: PBO:0084218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends","termid":"PBO:0084218"}


id: PBO:0087270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; regulates the organization and function of the actin cytoskeleton; inhibits clathrin-mediated endocytosis; phosphorylates the Pan1p and Sla1p subunits of the Pan1p-Sla1p-End3p complex, resulting in inhibition of complex formation; inhibits Scd5p through phosphorylation; phosphorylates Pan1p-interacting proteins, Ent1/2 and Yap1801/2; negatively regulated through autophosphorylation; functional overlap with ARK1","termid":"PBO:0087270"}


id: PBO:0039843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP11A-SCG5 readthrough","termid":"PBO:0039843"}


id: PBO:0064384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 6","termid":"PBO:0064384"}


id: PBO:0058870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9902-2","termid":"PBO:0058870"}


id: GO:1905721
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93153],"is_not":false,"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:11007487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"mitotic spindle astral microtubule","termid":"GO:0061673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0072686","GO:0015630","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle astral microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905721","terms_by_termid":{"GO:1905721":null}}


id: PR:O74978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1827.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C1827.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.05c","synonyms":[{"name":"Spom972h-SPCC1827.05c","type":"exact"}],"termid":"PR:O74978"}


id: PBO:0109371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 6","termid":"PBO:0109371"}


id: FYPO:0007818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein ubiquitination during nitrogen starvation","synonyms":[{"name":"decreased protein ubiquitination during nitrogen depletion","type":"exact"},{"name":"decreased protein ubiquitination during nitrogen deprivation","type":"exact"},{"name":"decreased protein ubiquitinylation during nitrogen starvation","type":"exact"},{"name":"decreased protein ubiquitylation during nitrogen starvation","type":"exact"},{"name":"reduced protein ubiquitination during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007818"}


id: PBO:0080658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 2","termid":"PBO:0080658"}


id: PBO:0005828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron/ascorbate oxidoreductase family","termid":"PBO:0005828"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: PBO:0005057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf5","termid":"PBO:0005057"}


id: PR:O14078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.13c gene.","definition_xrefs":["UniProtKB:O14078","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.13c","synonyms":[{"name":"OLA1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPACUNK4.13c","type":"exact"}],"termid":"PR:O14078"}


id: GO:0071834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that contributes to a process of sexual reproduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mating pheromone secretion","synonyms":[{"name":"mating-type pheromone secretion","type":"exact"}],"termid":"GO:0071834"}


id: PBO:0084170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved zinc metalloprotease; component of the ER quality control mechanism that removes faulty proteins clogging translocation channels; inhibits SRP-independent translocation into the ER; has two roles in a-factor maturation, C-terminal CAAX proteolysis and the first step of N-terminal proteolytic processing; cleaves isoprenylated and non-prenylated oligopeptides; human homolog ZMPSTE24 implicated in mandibuloacral dysplasia (MAD), and complements the null mutant","termid":"PBO:0084170"}


id: PBO:0029496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromosome_disjunction_at_meiosis_I","termid":"PBO:0029496"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: PBO:0060159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 7 (pseudogene)","termid":"PBO:0060159"}


id: PBO:0018021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-U ortholog Mis17","termid":"PBO:0018021"}


id: SO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene trap construct is a type of engineered plasmid which is designed to integrate into a genome and produce a fusion transcript between exons of the gene into which it inserts and a reporter element in the construct. Gene traps contain a splice acceptor, do not contain promoter elements for the reporter, and are mutagenic. Gene traps may be bicistronic with the second cassette containing a promoter driving an a selectable marker.","definition_xrefs":["ZFIN:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_trap_construct","synonyms":[{"name":"gene trap construct","type":"exact"}],"termid":"SO:0001477"}


id: PBO:0070755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 11","termid":"PBO:0070755"}


id: GO:0015919
data:
  {"annotated_genes":["SJAG_03324","SJAG_02693","SJAG_02997","SJAG_01165","SJAG_02619","SJAG_00891","SJAG_01854","SJAG_02034","SJAG_03440","SJAG_00702","SJAG_03781","SJAG_04763","SJAG_00326","SJAG_05315","SJAG_02797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101406,106232,92651,86433,62848,94409,107569,86636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[108034,99268,93137],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[113450,97471],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[86628,107570,91609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"The directed movement of substances to, from or across the peroxisomal membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal transport","termid":"GO:0043574"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04763":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"peroxisomal membrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015919","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0065156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 6","termid":"PBO:0065156"}


id: PBO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 65","termid":"PBO:0071063"}


id: PBO:0069728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1009, pseudogene","termid":"PBO:0069728"}


id: FYPO:0003170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal arginine import","termid":"FYPO:0001654"},{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased arginine import","synonyms":[{"name":"increased L-arginine import","type":"exact"},{"name":"increased L-arginine import across plasma membrane","type":"exact"},{"name":"increased L-arginine uptake","type":"exact"},{"name":"increased arginine import during mitotic cell cycle","type":"related"},{"name":"increased arginine import during vegetative growth","type":"exact"},{"name":"increased arginine import into cell","type":"exact"}],"termid":"FYPO:0003170"}


id: GO:0061975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20097540","PMID:20679519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"articular cartilage development","synonyms":[{"name":"articular cartilage of joint development","type":"exact"}],"termid":"GO:0061975"}


id: PBO:0087329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin; involved in retrieval of late-Golgi SNAREs from post-Golgi endosomes to the trans-Golgi network and in cytoplasm to vacuole transport; contains a PX phosphoinositide-binding domain; forms complexes with Snx41p and with Atg20p","termid":"PBO:0087329"}


id: GO:0008802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: betaine aldehyde + NAD+ + H2O = betaine + NADH + H+.","definition_xrefs":["EC:1.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"betaine-aldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:BADH-RXN","Reactome:R-HSA-6797955","RHEA:15305"],"synonyms":[{"name":"BADH activity","type":"related"},{"name":"BetB","type":"related"},{"name":"betaine aldehyde dehydrogenase activity","type":"related"},{"name":"betaine aldehyde oxidase activity","type":"related"},{"name":"betaine-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008802"}


id: GO:0047879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 malonyl-CoA + propionyl-CoA = 7 CoA + 6-deoxyerythronolide B.","definition_xrefs":["EC:2.3.1.94","MetaCyc:ERYTHRONOLIDE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"erythronolide synthase activity","secondary_identifiers":["RHEA:23068"],"synonyms":[{"name":"erythronolide condensing enzyme activity","type":"related"},{"name":"malonyl-CoA:propionyl-CoA malonyltransferase (cyclizing)","type":"related"}],"termid":"GO:0047879"}


id: GO:0150061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 3 (AMY3), a G protein-coupled receptor complex, on the surface of the target cell. The AMY3 signaling pathway can also be initiated by the amyloid-beta complex. AMY3 signaling results in increased import of calcium ions into the cytosol across plasma membrane, increased phosphorylation of ERK1/2, Act, and a PKA regulatory subunit II, as well as increased expression of cFos.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor 3 signaling pathway","synonyms":[{"name":"AMY3 signaling pathway","type":"exact"}],"termid":"GO:0150061"}


id: PBO:0051319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR10-1 (pseudogene)","termid":"PBO:0051319"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: GO:0018394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-lysine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine acetylation","termid":"GO:0018394"}


id: PBO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin","termid":"PBO:0045707"}


id: GO:0009690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytokinin metabolic process","synonyms":[{"name":"cytokinin metabolism","type":"exact"}],"termid":"GO:0009690"}


id: GO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in changes in chromatin structure contributing to replicative cell aging.","definition_xrefs":["GOC:jh","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in replicative cell aging (obsolete GO:0001304)","synonyms":[{"name":"progressive alteration of chromatin during replicative cell ageing","type":"exact"},{"name":"progressive alteration of chromatin during replicative cell aging","type":"related"}],"termid":"GO:0001304"}


id: PBO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, involved in translation initiation Psi1","termid":"PBO:0005792"}


id: PBO:0055166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2587","termid":"PBO:0055166"}


id: PBO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1 (predicted)","termid":"PBO:0000654"}


id: GO:0099104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a potassium channel, resulting in its opening.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel regulator activity","termid":"GO:0015459"},{"relation_name":"is_a","term_name":"channel activator activity","termid":"GO:0099103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"potassium channel activator activity","termid":"GO:0099104"}


id: SO:0001415
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where a deletion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion_breakpoint","synonyms":[{"name":"deletion breakpoint","type":"exact"}],"termid":"SO:0001415"}


id: PBO:0088403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp16","termid":"PBO:0088403"}


id: GO:0008765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate.","definition_xrefs":["EC:6.3.2.13","RHEA:23676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity","secondary_identifiers":["KEGG_REACTION:R02788","MetaCyc:UDP-NACMURALGLDAPLIG-RXN"],"synonyms":[{"name":"MurE synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:(L)-meso-2,6-diaminoheptanedioate gamma-ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-2,6-diamino-heptanedioate ligase (ADP-forming) activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl-tripeptide synthetase activity","type":"related"}],"termid":"GO:0008765"}


id: PATO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cladodromous","termid":"PATO:0001971"}


id: GO:0034614
data:
  {"annotated_genes":["SJAG_04403","SJAG_03303","SJAG_01734","SJAG_03653","SJAG_00141","SJAG_04788","SJAG_04823","SJAG_05181","SJAG_04953","SJAG_02515","SJAG_04399","SJAG_00668","SJAG_04632","SJAG_01216","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96159],"is_not":false,"summary":null,"term":"GO:0034614"},{"annotations":[105015,114407,101206,113510,96158,91374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[106279,95439,64561,85198,85614,67592,96319,106324,58059,89310],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"},{"relation_name":"is_a","term_name":"cellular response to oxidative stress","termid":"GO:0034599"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reactive oxygen species","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular response to AOS","type":"exact"},{"name":"cellular response to ROI","type":"exact"},{"name":"cellular response to ROS","type":"exact"},{"name":"cellular response to active oxygen species","type":"exact"},{"name":"cellular response to reactive oxidative species","type":"exact"},{"name":"cellular response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0034614","terms_by_termid":{"GO:0019430":null,"GO:0034614":null,"GO:0061692":null}}


id: FYPO:0002517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"},{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from defective checkpoint activation","type":"related"}],"termid":"FYPO:0002517"}


id: FYPO:0002309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal IMP binding","termid":"FYPO:0002308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased IMP binding","synonyms":[{"name":"reduced IMP binding","type":"exact"}],"termid":"FYPO:0002309"}


id: PBO:0080564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Williams-Beuren syndrome chromosome region 2","termid":"PBO:0080564"}


id: PBO:0066391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 1","termid":"PBO:0066391"}


id: GO:0044402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism within a multispecies community gains an advantage in growth or survival over another organism of a different species in that community.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete competition with other organism (obsolete GO:0044402)","synonyms":[{"name":"competition with another organism","type":"exact"},{"name":"interspecies competition","type":"broad"}],"termid":"GO:0044402"}


id: GO:0070767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains BRCA1 and Rad 51, and is involved in the control of recombination and of genome integrity.","definition_xrefs":["GOC:mah","PMID:9008167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"BRCA1-Rad51 complex","termid":"GO:0070767"}


id: PBO:0080600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 35","termid":"PBO:0080600"}


id: PBO:0083379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ALT2/YDR111C; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0083379"}


id: PBO:0074396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 6","termid":"PBO:0074396"}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: PATO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000535 salt sensitivity value (obsolete PATO:0000535)","termid":"PATO:0000535"}


id: GO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = lupeol. This reaction is the cyclization of (S)-2,3-epoxysqualene (2,3-oxidosqualene) to lupeol.","definition_xrefs":["MetaCyc:RXN-111","PMID:9883589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lupeol synthase activity","secondary_identifiers":["RHEA:31383","EC:5.4.99.41"],"synonyms":[{"name":"oxidosqualene:lupeol cyclase activity","type":"exact"}],"termid":"GO:0042299"}


id: PBO:0110392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial nucleoid associated protein 1","termid":"PBO:0110392"}


id: PBO:0067401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 508, pseudogene","termid":"PBO:0067401"}


id: GO:1901051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of atropine. Atropine is the racemic mixture of hyoscyamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:2879005","PMID:33572199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"atropine biosynthetic process","secondary_identifiers":["GO:1901049"],"synonyms":[{"name":"atropine anabolism","type":"exact"},{"name":"atropine biosynthesis","type":"exact"},{"name":"atropine formation","type":"exact"},{"name":"atropine metabolic process","type":"broad"},{"name":"atropine metabolism","type":"broad"},{"name":"atropine synthesis","type":"exact"},{"name":"hyoscyamine biosynthetic process","type":"exact"}],"termid":"GO:1901051"}


id: PBO:0057071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 151b","termid":"PBO:0057071"}


id: PBO:0047957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(20)(p12.2)","termid":"PBO:0047957"}


id: PBO:0042344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD81 molecule","termid":"PBO:0042344"}


id: SO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together regulatory regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_fusion","synonyms":[{"name":"regulatory region fusion","type":"exact"}],"termid":"SO:0001887"}


id: GO:0030744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + luteolin = 4',5,7-trihydroxy-3'-methoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.42","RHEA:14589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"luteolin O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12616","KEGG_REACTION:R03587"],"synonyms":[{"name":"S-adenosyl-L-methionine:5,7,3',4'-tetrahydroxyflavone 3'-O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:flavone/flavonol 3'-O-methyltransferase activity","type":"related"},{"name":"luteolin 3'-O-methyltransferase activity","type":"related"},{"name":"luteolin methyltransferase activity","type":"related"},{"name":"o-dihydric phenol meta-O-methyltransferase activity","type":"related"},{"name":"o-dihydric phenol methyltransferase activity","type":"related"},{"name":"o-diphenol m-O-methyltransferase activity","type":"related"}],"termid":"GO:0030744"}


id: PBO:0081565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 490","termid":"PBO:0081565"}


id: GO:1990371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to phenol.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to phenol (obsolete GO:1990371)","termid":"GO:1990371"}


id: FYPO:0007793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which an increase in RNA level that occurs as part of a cellular response to oxidative stress begins later than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:10428959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress during vegetative growth","termid":"FYPO:0001340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of increase in RNA level during cellular response to oxidative stress","synonyms":[{"name":"delayed increase in RNA level during cellular response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"delayed onset of increase in RNA level in response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in transcript level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007793"}


id: GO:0015296
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(out) + cation(out) = anion(in) + cation(in).","definition_xrefs":["TC:2.A.1.14.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"monoatomic anion:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"anion:cation symporter activity","type":"broad"}],"termid":"GO:0015296","terms_by_termid":{"GO:0015379":null}}


id: GO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"lipase activator activity","termid":"GO:0060229"}


id: GO:0106046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of glyoxal from a glycated guanine, to form glycolate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"guanine deglycation, glyoxal removal","termid":"GO:0106046"}


id: GO:0030689
data:
  {"annotated_genes":["SJAG_01275","SJAG_01494","SJAG_00311","SJAG_00838","SJAG_04346","SJAG_03654"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88188,94056,84166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030690"},{"annotations":[88189,84167,108618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030691"},{"annotations":[106281,99824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"Any of several heterodimers containing one or two Noc proteins, associated with preribosomal complexes; involved in ribosome biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00838":null,"SJAG_01275":null,"SJAG_01494":null,"SJAG_03654":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Noc complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030689","terms_by_termid":{"GO:0030690":null,"GO:0030691":null,"GO:0030692":null}}


id: GO:0055044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The interconnected cell membranes and intracellular regions of a plant. The interconnections occur via the plasmodesmata.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symplast","secondary_identifiers":["Wikipedia:Symplast"],"termid":"GO:0055044"}


id: PBO:0033775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_termination_of_RNA_polymerase_II_transcription_at_RTS1_barrier","termid":"PBO:0033775"}


id: PBO:0041176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A1","termid":"PBO:0041176"}


id: PBO:0078699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 1-2","termid":"PBO:0078699"}


id: PBO:0074053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 33","termid":"PBO:0074053"}


id: PBO:0071816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 11","termid":"PBO:0071816"}


id: PBO:0034116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_decreases_activity_of","termid":"PBO:0034116"}


id: GO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"}


id: FYECO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which carbendazim was added to the experimental medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ carbendazim","synonyms":[{"name":"CBZ added","type":"exact"},{"name":"MBC added","type":"exact"},{"name":"mecarzole added","type":"exact"}],"termid":"FYECO:0000290"}


id: FYPO:0000793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}


id: GO:0045167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, a specific asymmetric distribution, resulting in the formation of daughter cells of different types.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:0045167"}


id: GO:1903469
data:
  {"annotated_genes":["SJAG_01884","SJAG_03780","SJAG_00400","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84536,99123,100327,108703],"is_not":false,"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"Any DNA replication, removal of RNA primer that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:1234","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication, removal of RNA primer","termid":"GO:0043137"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_03780":null,"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"removal of RNA primer involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication, removal of RNA primer involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication, removal of RNA primer involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA replication, removal of RNA primer involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"Okazaki initiator RNA removal involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"Okazaki initiator RNA removal involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"Okazaki initiator RNA removal involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"Okazaki initiator RNA removal involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"Okazaki initiator RNA removal involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"Okazaki initiator RNA removal involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903469","terms_by_termid":{"GO:1903469":null}}


id: GO:0043794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + coenzyme F420 = CO2 + reduced coenzyme F420.","definition_xrefs":["PMID:3801411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formate dehydrogenase (coenzyme F420) activity","secondary_identifiers":["EC:1.2.99.-"],"synonyms":[{"name":"formate dehydrogenase (F420) activity","type":"exact"}],"termid":"GO:0043794"}


id: PBO:0042400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 6","termid":"PBO:0042400"}


id: FYPO:0007250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal lipid binding","termid":"FYPO:0007250"}


id: GO:0009971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the anastral spindle in male meiotic cells.","definition_xrefs":["PMID:11973272","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in male meiosis","termid":"GO:0007053"},{"relation_name":"is_a","term_name":"anastral spindle assembly","termid":"GO:0055048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0007049","GO:0044085","GO:0140013"],"is_obsolete":false,"name":"anastral spindle assembly involved in male meiosis","termid":"GO:0009971"}


id: PATO:0000479
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000479 regulation value (obsolete PATO:0000479)","termid":"PATO:0000479"}


id: PBO:0057470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 588","termid":"PBO:0057470"}


id: GO:0047891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + 5,7,3',4'-tetrahydroxyflavone = UDP + 7-O-beta-D-glucosyl-5,7,3',4'-tetrahydroxyflavone.","definition_xrefs":["EC:2.4.1.81","MetaCyc:FLAVONE-7-O-BETA-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"flavone 7-O-beta-glucosyltransferase activity","secondary_identifiers":["RHEA:19577"],"synonyms":[{"name":"UDP-glucose-apigenin beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-luteolin beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:5,7,3',4'-tetrahydroxyflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-apigenin beta-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-luteolin beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:5,7,3',4'-tetrahydroxyflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"flavone 7-O-b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-apigenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-luteolin glucosyltransferase activity","type":"related"}],"termid":"GO:0047891"}


