# terms

id: FYECO:0000172
data:
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id: GO:0031377
data:
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id: PBO:0060264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYG1 exonuclease","termid":"PBO:0060264"}


id: PBO:0041000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boule homolog, RNA binding protein","termid":"PBO:0041000"}


id: PBO:0028425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_fluoride","termid":"PBO:0028425"}


id: GO:0006974
data:
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id: FYPO:0003304
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id: PBO:0050186
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 3","termid":"PBO:0050186"}


id: PBO:0084064
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084064"}


id: GO:2000833
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id: GO:0052138
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis on or near host (obsolete GO:0052138)","termid":"GO:0052138"}


id: FYPO:0004689
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is higher than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PMID:21253571","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased cenH-derived RNA level","synonyms":[{"name":"accumulation of cenH-derived RNA transcripts","type":"related"},{"name":"increased cenH RNA level","type":"exact"},{"name":"increased cenH-derived RNA accumulation","type":"related"},{"name":"increased cenH-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased cenH-derived RNA level during vegetative growth","type":"exact"},{"name":"increased cenH-derived RNA transcript level","type":"exact"}],"termid":"FYPO:0004689"}


id: FYPO:0005546
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id: PBO:0070669
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 40","termid":"PBO:0070669"}


id: GO:0009648
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id: FYPO:0003785
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"aseptate mononucleate vegetative cell","synonyms":[{"name":"aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"mononucleate aseptate vegetative cell","type":"exact"},{"name":"unseptated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003785"}


id: PBO:0052392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin associated protein 3","termid":"PBO:0052392"}


id: GO:0050339
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id: GO:0042405
data:
  {"annotated_genes":["SJAG_03300","SJAG_00302","SJAG_01186","SJAG_03543","SJAG_04140","SJAG_04645","SJAG_04855","SJAG_04055","SJAG_01374","SJAG_00082","SJAG_00471","SJAG_01805","SJAG_00335","SJAG_03048","SJAG_01837","SJAG_04187","SJAG_04601","SJAG_03745","SJAG_04768","SJAG_01408","SJAG_03161","SJAG_00178"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88420,101909,108774,108776,111056,107372,84958,98442,111644,112830,100467,87144,95205,86196,83725,108775,85213,100378,101546,98525,111645,84957,89977,108226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"An intranuclear focus at which aggregated proteins have been sequestered.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042405","terms_by_termid":{"GO:0140602":null}}


id: GO:0036146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycotoxin stimulus. A mycotoxin is a toxic chemical substance produced by fungi.","definition_xrefs":["PMID:20548963","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mycotoxin","termid":"GO:0010046"},{"relation_name":"is_a","term_name":"cellular response to toxic substance","termid":"GO:0097237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mycotoxin","termid":"GO:0036146"}


id: PBO:0038739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 11, pseudogene","termid":"PBO:0038739"}


id: GO:1901253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intracellular transport of viral material.","definition_xrefs":["GOC:jl","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport of viral material","termid":"GO:1901252"},{"relation_name":"is_a","term_name":"negative regulation of viral life cycle","termid":"GO:1903901"},{"relation_name":"negatively_regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular transport of viral material","synonyms":[{"name":"down regulation of egress of virus within host cell","type":"exact"},{"name":"down regulation of movement of virus within host cell","type":"exact"},{"name":"down regulation of viral egress","type":"exact"},{"name":"down-regulation of egress of virus within host cell","type":"exact"},{"name":"down-regulation of movement of virus within host cell","type":"exact"},{"name":"down-regulation of viral egress","type":"exact"},{"name":"downregulation of egress of virus within host cell","type":"exact"},{"name":"downregulation of movement of virus within host cell","type":"exact"},{"name":"downregulation of viral egress","type":"exact"},{"name":"inhibition of egress of virus within host cell","type":"narrow"},{"name":"inhibition of movement of virus within host cell","type":"exact"},{"name":"inhibition of viral egress","type":"exact"},{"name":"negative regulation of egress of virus within host cell","type":"related"},{"name":"negative regulation of movement of virus within host cell","type":"exact"},{"name":"negative regulation of viral egress","type":"exact"}],"termid":"GO:1901253"}


id: PBO:0017713
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GF14","termid":"PBO:0017713"}


id: PBO:0077937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTEP2-CSNK1E readthrough","termid":"PBO:0077937"}


id: PR:Q9UTB1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rcf1 gene.","definition_xrefs":["UniProtKB:Q9UTB1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 domain-containing protein C25B8.07c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.07c","synonyms":[{"name":"Spom972h-rcf1","type":"exact"}],"termid":"PR:Q9UTB1"}


id: GO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription factor TFIIH holo complex.","definition_xrefs":["PMID:11259578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex binding","termid":"GO:0062058"}


id: GO:0006505
data:
  {"annotated_genes":["SJAG_04165","SJAG_06425","SJAG_03878","SJAG_04337","SJAG_02488","SJAG_04881","SJAG_02903","SJAG_01570","SJAG_01860","SJAG_02776","SJAG_00831","SJAG_02913","SJAG_00295","SJAG_03801","SJAG_00068","SJAG_00846","SJAG_03066","SJAG_04924","SJAG_02804","SJAG_06383","SJAG_05327","SJAG_03292","SJAG_03506","SJAG_04975","SJAG_03115","SJAG_05219","SJAG_01227","SJAG_04119","SJAG_05278","SJAG_03672","SJAG_02523","SJAG_01416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96455],"is_not":false,"summary":null,"term":"GO:0006505"},{"annotations":[110126,87579,99885,88409,83671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[106114,92603,85758,84879,90689,104768,89171,96387,94282,97772,99948,103728,107779,108539,111377,89261,113379,94834,87411,102893,112302,89714,110952,99216,95038,85142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate group, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"GPI anchor metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0046472"],"synonyms":[{"name":"GPI anchor metabolism","type":"exact"},{"name":"GPI/GSI anchor metabolic process","type":"broad"},{"name":"GPI/GSI anchor metabolism","type":"broad"},{"name":"glycosylphosphatidylinositol metabolic process","type":"exact"},{"name":"glycosylphosphatidylinositol metabolism","type":"exact"}],"termid":"GO:0006505","terms_by_termid":{"GO:0006505":null,"GO:0006506":null,"GO:0016255":null}}


id: GO:1902613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["GO_REF:0000058","PMID:23624077","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"},{"relation_name":"negatively_regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anti-Mullerian hormone signaling pathway","synonyms":[{"name":"down regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"down-regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"downregulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"inhibition of anti-Mullerian hormone signaling pathway","type":"narrow"}],"termid":"GO:1902613"}


id: PBO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase/chaperone Afg1","termid":"PBO:0090541"}


id: GO:0052218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052218)","synonyms":[{"name":"positive energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052218"}


id: PBO:0080517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASF3 antisense RNA 1","termid":"PBO:0080517"}


id: PBO:0089311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid8","termid":"PBO:0089311"}


id: GO:0060423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the spatial subdivision of an axis or axes along the foregut to define an area or volume in which specific patterns of cell differentiation will take place.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foregut regionalization","termid":"GO:0060423"}


id: GO:0004163
data:
  {"annotated_genes":["SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90624],"is_not":false,"summary":null,"term":"GO:0004163"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-diphosphomevalonate + ATP = ADP + CO2 + H+ + isopentenyl diphosphate + phosphate.","definition_xrefs":["RHEA:23732","EC:4.1.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"diphosphomevalonate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01121","MetaCyc:DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN","Reactome:R-HSA-191414"],"synonyms":[{"name":"5-pyrophosphomevalonate decarboxylase activity","type":"related"},{"name":"ATP:(R)-5-diphosphomevalonate carboxy-lyase (adding ATP; isopentenyl-diphosphate-forming)","type":"related"},{"name":"ATP:(R)-5-diphosphomevalonate carboxy-lyase (dehydrating)","type":"related"},{"name":"mevalonate 5-diphosphate decarboxylase activity","type":"related"},{"name":"mevalonate diphosphate decarboxylase activity","type":"related"},{"name":"mevalonate pyrophosphate decarboxylase activity","type":"related"},{"name":"mevalonate-5-pyrophosphate decarboxylase activity","type":"related"},{"name":"pyrophosphomevalonate decarboxylase activity","type":"related"},{"name":"pyrophosphomevalonic acid decarboxylase activity","type":"related"}],"termid":"GO:0004163","terms_by_termid":{"GO:0004163":null}}


id: PBO:0035908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule_depolymerization","termid":"PBO:0035908"}


id: GO:0007208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor signaling pathway","termid":"GO:0098664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by serotonin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007208"}


id: PBO:0085379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP binding cassette (ABC) transporter; multidrug transporter and general stress response factor implicated in cellular detoxification; regulated by Pdr1p, Pdr3p and Pdr8p; promoter contains a PDR responsive element; PDR15 has a paralog, PDR5, that arose from the whole genome duplication","termid":"PBO:0085379"}


id: PBO:0067637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 810, pseudogene","termid":"PBO:0067637"}


id: SO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal of an immunoglobulin/T-cell receptor gene, including the 3' D-heptamer (SO:0000493), 3' D-spacer, and 3' D-nonamer (SO:0000494) in 3' of the D-region of a D-gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"D_gene_recombination_feature","termid":"SO:0000492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_recombination_signal_sequence","synonyms":[{"name":"3'D-RS","type":"exact"},{"name":"three prime D recombination signal sequence","type":"exact"},{"name":"three_prime_D-recombination_signal_sequence","type":"exact"}],"termid":"SO:0000570"}


id: PBO:0048763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase","termid":"PBO:0048763"}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: GO:0034606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response by the male to a hermaphrodite after initial contact following mate finding. The male stops forward locomotion, presses the ventral side of his tail against his partner's body, and begins moving backward along the hermaphrodite. Male response behavior is initiated when sensory neurons located in the rays of his tail contact a potential mate.","definition_xrefs":["WB_REF:WBPaper00002109","PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hermaphrodite contact","termid":"GO:0034606"}


id: GO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of competence for transformation","synonyms":[{"name":"down regulation of establishment of competence for transformation","type":"exact"},{"name":"down-regulation of establishment of competence for transformation","type":"exact"},{"name":"downregulation of establishment of competence for transformation","type":"exact"},{"name":"inhibition of establishment of competence for transformation","type":"narrow"},{"name":"inhibitor of the establishment of competence for transformation activity","type":"related"}],"termid":"GO:0045808"}


id: PBO:0043064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRFAM7A pseudogene 2","termid":"PBO:0043064"}


id: PBO:0067210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 275, pseudogene","termid":"PBO:0067210"}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:jl","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: GO:0030905
data:
  {"annotated_genes":["SJAG_00971"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97877],"is_not":false,"summary":null,"term":"GO:0030905"}]},"cv_name":"cellular_component","definition":"The dimeric subcomplex of the retromer, believed to be peripherally associated with the membrane. This dimeric complex is responsible for remodeling endosomal membranes to form a tube-structure to which cargo molecules are selected for recycling. The budding yeast complex comprises Vps5p and Vps17p, and may contain multiple copies of a Vps5p/Vps17p dimer. The mammalian complex contains SNX1 or SNX2 dimerized with SNX5 or SNX6.","definition_xrefs":["PMID:26220253","GOC:bf","PMID:9700157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"retromer complex","termid":"GO:0030904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"retromer, tubulation complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SNX-BAR dimer","type":"exact"},{"name":"heterodimeric membrane-deforming retromer subcomplex","type":"exact"},{"name":"retromer complex, outer shell","type":"exact"}],"termid":"GO:0030905","terms_by_termid":{"GO:0030905":null}}


id: GO:0034143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"regulation of TLR4 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034143"}


id: GO:0008913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a lauroyl (dodecanoyl) group from one compound to another.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"lauroyltransferase activity","synonyms":[{"name":"lauroyl transferase activity","type":"exact"}],"termid":"GO:0008913"}


id: PBO:0051370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-20","termid":"PBO:0051370"}


id: GO:0018743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9R,10R-dihydrodiolphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-9,10-epoxide hydrolase activity","termid":"GO:0019119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenanthrene-9,10-epoxide hydrolase (9R,10R-forming) activity","termid":"GO:0018743"}


id: GO:0004631
data:
  {"annotated_genes":["SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92774],"is_not":false,"summary":null,"term":"GO:0004631"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H+.","definition_xrefs":["EC:2.7.4.2","RHEA:16341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01474":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"phosphomevalonate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03245","MetaCyc:PHOSPHOMEVALONATE-KINASE-RXN","Reactome:R-HSA-191422"],"synonyms":[{"name":"5-phosphomevalonate kinase activity","type":"related"},{"name":"ATP:(R)-5-phosphomevalonate phosphotransferase activity","type":"related"},{"name":"ATP:5-phosphomevalonate phosphotransferase activity","type":"related"},{"name":"mevalonate phosphate kinase activity","type":"related"},{"name":"mevalonate-5-phosphate kinase activity","type":"related"},{"name":"mevalonic acid phosphate kinase activity","type":"related"}],"termid":"GO:0004631","terms_by_termid":{"GO:0004631":null}}


id: PBO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DM1 locus antisense RNA","termid":"PBO:0045098"}


id: GO:0006489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a diphosphorylated dolichol derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"dolichyl diphosphate metabolic process","termid":"GO:0046465"},{"relation_name":"part_of","term_name":"dolichol-linked oligosaccharide biosynthetic process","termid":"GO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006486"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006486","GO:0006629"],"is_obsolete":false,"name":"dolichyl diphosphate biosynthetic process","synonyms":[{"name":"dolichyl diphosphate anabolism","type":"exact"},{"name":"dolichyl diphosphate biosynthesis","type":"exact"},{"name":"dolichyl diphosphate formation","type":"exact"},{"name":"dolichyl diphosphate synthesis","type":"exact"}],"termid":"GO:0006489"}


id: PBO:0089048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase Nnt1","termid":"PBO:0089048"}


id: GO:0019881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete streptomycin susceptibility/resistance (obsolete GO:0019881)","synonyms":[{"name":"streptomycin susceptibility/resistance","type":"exact"}],"termid":"GO:0019881"}


id: PBO:0025493
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric)","termid":"PBO:0025493"}


id: GO:0070386
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A procollagen-proline 4-dioxygenase complex that contains alpha subunits of the type I isoform; its activity is readily inhibited by poly(L-proline).","definition_xrefs":["PMID:14500733","PMID:7753822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline 4-dioxygenase complex","termid":"GO:0016222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase complex, alpha(I) type","synonyms":[{"name":"procollagen-proline, 2-oxoglutarate-4-dioxygenase complex, alpha(I) type","type":"exact"},{"name":"prolyl 4-hydroxylase complex (alpha(I)-type)","type":"broad"}],"termid":"GO:0070386"}


id: PBO:0088210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cell wall mannoprotein involved in foam formation; contains a signal peptide and a putative GPI anchor; protein precursor homologous to Awa1p and Hpf1p","termid":"PBO:0088210"}


id: GO:0005634
data:
  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id: GO:0042458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nopaline into other compounds, including proline.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"nopaline catabolic process","termid":"GO:0019468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"nopaline catabolic process to proline","secondary_identifiers":["MetaCyc:NOPALINEDEG-PWY"],"synonyms":[{"name":"nopaline breakdown to proline","type":"exact"},{"name":"nopaline degradation to proline","type":"exact"}],"termid":"GO:0042458"}


id: PBO:0087202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase; methylates cytosine to m5C at several positions in tRNAs and intron-containing pre-tRNAs; increases proportion of tRNALeu(CAA) with m5C at wobble position in response to hydrogen peroxide, causing selective translation of mRNA from genes enriched in TTG codon; loss of NCL1 confers hypersensitivity to oxidative stress; similar to Nop2p and human proliferation associated nucleolar protein p120","termid":"PBO:0087202"}


id: FYPO:0007458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization to the portion of the nuclear envelope enclosing the mitotic nuclear bridge does not occur. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase. Normally, nuclear pores that lack baskets are found in the midzone of the nuclear bridge.","definition_xrefs":["PMID:32848252","PomBase:mah","GO:0140510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization during mitosis","termid":"FYPO:0003783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished nuclear pore localization to mitotic nuclear bridge","synonyms":[{"name":"abolished NPC localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore complex localization to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore distribution to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localisation to mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization in nuclear envelope at mitotic nuclear bridge","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge during vegetative growth","type":"exact"},{"name":"abolished nuclear pore localization to mitotic nuclear bridge membrane domain","type":"exact"}],"termid":"FYPO:0007458"}


id: PBO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 27","termid":"PBO:0046528"}


id: PBO:0090096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK cascade adaptor protein Ste4","termid":"PBO:0090096"}


id: GO:0050084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + H2O = D-mannitol + 2 H+ + phosphate.","definition_xrefs":["RHEA:19537","EC:3.1.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"mannitol-1-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02167","MetaCyc:MANNITOL-1-PHOSPHATASE-RXN"],"synonyms":[{"name":"D-mannitol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"mannitol-1-phosphate phosphatase activity","type":"related"}],"termid":"GO:0050084"}


id: PBO:0066944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 246","termid":"PBO:0066944"}


id: SO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a pyrrolysine anticodon, and a 3' pyrrolysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"pyrrolysine_tRNA_primary_transcript","termid":"SO:0001178"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysyl_tRNA","synonyms":[{"name":"pyrrolysyl tRNA","type":"exact"},{"name":"pyrrolysyl-transfer RNA","type":"exact"},{"name":"pyrrolysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000766"}


id: FYPO:0003259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal proline import","synonyms":[{"name":"normal L-proline import","type":"exact"},{"name":"normal L-proline import across plasma membrane","type":"exact"},{"name":"normal proline import during mitotic cell cycle","type":"related"},{"name":"normal proline import during vegetative growth","type":"exact"},{"name":"normal proline import into cell","type":"exact"},{"name":"normal proline uptake","type":"exact"}],"termid":"FYPO:0003259"}


id: PBO:0043901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 1","termid":"PBO:0043901"}


id: GO:0008381
data:
  {"annotated_genes":["SJAG_04668","SJAG_02877","SJAG_02019","SJAG_02532","SJAG_05342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91871],"is_not":false,"summary":null,"term":"GO:0008381"},{"annotations":[99944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[88533,88592,110110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"mechanosensitive monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:1.A.23.2.1","GO:0022833"],"synonyms":[{"name":"mechanically gated channel activity","type":"exact"},{"name":"mechanically-gated channel activity","type":"exact"},{"name":"mechanically-gated ion channel activity","type":"exact"},{"name":"mechanosensitive ion channel activity","type":"broad"}],"termid":"GO:0008381","terms_by_termid":{"GO:0008381":null,"GO:0015275":null,"GO:0140135":null}}


id: PBO:0074261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 2","termid":"PBO:0074261"}


id: PBO:0071495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 36","termid":"PBO:0071495"}


id: GO:0098510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect high environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of high humidity","termid":"GO:0098510"}


id: PBO:0011617
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0011617"}


id: PBO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 10","termid":"PBO:0072658"}


id: PBO:0031577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization","termid":"PBO:0031577"}


id: FYPO:0000372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA modification is decreased. All RNA modification may be decreased, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA modification","synonyms":[{"name":"RNA modification: decreased","type":"related"},{"name":"decreased RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased RNA modification during vegetative growth","type":"exact"},{"name":"reduced RNA modification","type":"exact"}],"termid":"FYPO:0000372"}


id: PBO:0053739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 964","termid":"PBO:0053739"}


id: PBO:0084518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; required for respiratory growth; null mutant displays induction of the unfolded protein response; homologous to worm Y62E10A.10/EMC-3, fly CG6750, human TMEM111","termid":"PBO:0084518"}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: GO:0048732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gland development","termid":"GO:0048732"}


id: GO:1990654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of sebocytes by cell division, resulting in the expansion of their population. A sebocyte is an epithelial cell that makes up the sebaceous glands, and secrete sebum.","definition_xrefs":["PMID:18474083","PMID:16901790","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebum secreting cell proliferation","synonyms":[{"name":"sebocyte proliferation","type":"related"}],"termid":"GO:1990654"}


id: GO:1901932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bicyclogermacrene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"bicyclogermacrene metabolic process","synonyms":[{"name":"bicyclogermacrene metabolism","type":"exact"}],"termid":"GO:1901932"}


id: MOD:00248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00248"}


id: GO:1900309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of maltoheptaose metabolic process","synonyms":[{"name":"regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900309"}


id: GO:0002924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"},{"relation_name":"negatively_regulates","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of humoral immune response mediated by circulating immunoglobulin","synonyms":[{"name":"down regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"down-regulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"downregulation of humoral immune response mediated by circulating immunoglobulin","type":"exact"},{"name":"inhibition of humoral immune response mediated by circulating immunoglobulin","type":"narrow"}],"termid":"GO:0002924"}


id: PBO:0065768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl-tRNA synthetase 1","termid":"PBO:0065768"}


id: GO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a heart valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve formation","termid":"GO:0003188"}


id: PBO:0082666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p","termid":"PBO:0082666"}


id: PBO:0052458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 7 pseudogene 1","termid":"PBO:0052458"}


id: PBO:0040895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMPR1B divergent transcript","termid":"PBO:0040895"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: FYPO:0003256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal proline import","synonyms":[{"name":"abnormal L-proline import","type":"exact"},{"name":"abnormal L-proline import across plasma membrane","type":"exact"},{"name":"abnormal proline import during mitotic cell cycle","type":"related"},{"name":"abnormal proline import during vegetative growth","type":"exact"},{"name":"abnormal proline import into cell","type":"exact"},{"name":"abnormal proline uptake","type":"exact"}],"termid":"FYPO:0003256"}


id: GO:0097643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with amylin to initiate a change in cell activity.","definition_xrefs":["PMID:18687416","PMID:12037140","GOC:bhm","PMID:10871296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor activity","termid":"GO:0097642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"amylin receptor activity","termid":"GO:0097643"}


id: PBO:0088539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, inorganic phosphate/copper","termid":"PBO:0088539"}


id: GO:0004694
data:
  {"annotated_genes":["SJAG_00169","SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88701,89000,105869],"is_not":false,"summary":null,"term":"GO:0004694"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [eukaryotic translation initiation factor 2 alpha subunit] = ADP + [eukaryotic translation initiation factor 2 alpha subunit] phosphate.","definition_xrefs":["GOC:mah","InterPro:IPR015516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674","GO:0140096","GO:0004672"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2alpha kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004694","terms_by_termid":{"GO:0004694":null}}


id: GO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first division of meiosis in which homologous chromosomes are paired and segregated from each other, occurring in the constitutive absence of chiasmata.","definition_xrefs":["PMID:10690419","GOC:sart","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"achiasmate meiosis I","synonyms":[{"name":"achiasmate meiosis I nuclear division","type":"exact"}],"termid":"GO:0000705"}


id: PBO:0075631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2A","termid":"PBO:0075631"}


id: FYPO:0002064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 3'-5'-exoribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"},{"relation_name":"is_a","term_name":"abolished ribonuclease activity","termid":"FYPO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished 3'-5'-exoribonuclease activity","synonyms":[{"name":"3'-5'-exoribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0002064"}


id: PBO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 antisense RNA 2","termid":"PBO:0051002"}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: FYPO:0003531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which peroxisome size is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal peroxisome size","synonyms":[{"name":"normal peroxisome size during mitotic cell cycle","type":"related"},{"name":"normal peroxisome size during vegetative growth","type":"exact"}],"termid":"FYPO:0003531"}


id: PBO:0111381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Llp1","termid":"PBO:0111381"}


id: PBO:0091743
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-Dependent Kinase","termid":"PBO:0091743"}


id: PBO:0049390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 3, mitochondrial","termid":"PBO:0049390"}


id: FYPO:0005878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize tryptophan, and therefore requires tryptophan in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for tryptophan","synonyms":[{"name":"growth auxotrophic for tryptophan during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for tryptophan during vegetative growth","type":"exact"},{"name":"tryptophan auxotrophy","type":"exact"}],"termid":"FYPO:0005878"}


id: PBO:0040050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1B pseudogene 1","termid":"PBO:0040050"}


id: PBO:0004377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase","termid":"PBO:0004377"}


id: GO:1904433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ferrous iron binding.","definition_xrefs":["GOC:BHF","GOC:kom","GOC:TermGenie","PMID:18353247","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of ferrous iron binding","termid":"GO:1904432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ferrous iron binding","synonyms":[{"name":"down regulation of ferrous iron binding","type":"exact"},{"name":"down-regulation of ferrous iron binding","type":"exact"},{"name":"downregulation of ferrous iron binding","type":"exact"},{"name":"inhibition of ferrous iron binding","type":"narrow"}],"termid":"GO:1904433"}


id: GO:0002802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antifungal peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide secretion","termid":"GO:0002796"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide secretion","termid":"GO:0002800"},{"relation_name":"is_a","term_name":"positive regulation of antifungal peptide production","termid":"GO:0002804"},{"relation_name":"positively_regulates","term_name":"antifungal peptide secretion","termid":"GO:0002782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antifungal peptide secretion","synonyms":[{"name":"activation of antifungal peptide secretion","type":"narrow"},{"name":"stimulation of antifungal peptide secretion","type":"narrow"},{"name":"up regulation of antifungal peptide secretion","type":"exact"},{"name":"up-regulation of antifungal peptide secretion","type":"exact"},{"name":"upregulation of antifungal peptide secretion","type":"exact"}],"termid":"GO:0002802"}


id: PBO:0062949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasomal ATPase associated factor 1","termid":"PBO:0062949"}


id: GO:0000774
data:
  {"annotated_genes":["SJAG_01556","SJAG_01737","SJAG_01510","SJAG_04511","SJAG_04014","SJAG_02875","SJAG_04817"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69674,84146,88520,100584,105935,106066,107041],"is_not":false,"summary":null,"term":"GO:0000774"}]},"cv_name":"molecular_function","definition":"Binds to and stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01510":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02875":null,"SJAG_04014":null,"SJAG_04511":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"adenyl-nucleotide exchange factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5252079"],"termid":"GO:0000774","terms_by_termid":{"GO:0000774":null}}


id: PBO:0029485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_curved_vegetative_cell","termid":"PBO:0029485"}


id: GO:0002606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"positively_regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002606"}


id: PBO:0068028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 333","termid":"PBO:0068028"}


id: PBO:0066914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 216","termid":"PBO:0066914"}


id: GO:0120280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cilary pro-basal body is an immature, partially assembled form of a ciliary basal body found next to the basal body of a cilium. Pro-basal bodies are not capable of nucleating a cilium. As the cell progresses through the cell cycle, continuing assembly will convert the pro-basal body into a mature basal body that is capable of nucleating a cilium.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary pro-basal body","synonyms":[{"name":"flagellar pro-basal body","type":"exact"},{"name":"flagellar probasal body","type":"exact"},{"name":"pro-basal body","type":"broad"},{"name":"pro-centriole","type":"broad"},{"name":"probasal body","type":"broad"}],"termid":"GO:0120280"}


id: GO:0007114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of asexual reproduction, occurring in certain bacteria and fungi (e.g. yeasts) and some primitive animals in which an individual arises from a daughter cell formed by pinching off a part of the parent cell. The budlike outgrowths so formed may sometimes remain attached to the parent cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual reproduction","termid":"GO:0019954"},{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell budding","synonyms":[{"name":"budding","type":"broad"}],"termid":"GO:0007114"}


id: PBO:0043858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP2 and RIPK1 domain containing adaptor with death domain","termid":"PBO:0043858"}


id: PATO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting disturbance of its smoothness or regularity.","definition_xrefs":[".thefreedictionary.com:.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ruffled","termid":"PATO:0001799"}


id: GO:0009059
data:
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type"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"fum1delta":{"display_name":"fum1delta","display_uniquename":"fum1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04843:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and 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cell population","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04843","SJAG_04464","SJAG_01753","SJAG_00426","SJAG_01794","SJAG_03720","SJAG_03449","SJAG_01242","SJAG_03453","SJAG_03198","SJAG_00409","SJAG_03920","SJAG_05207","SJAG_01946","SJAG_00514","SJAG_04703","SJAG_01355","SJAG_00364","SJAG_00601","SJAG_03892","SJAG_02763","SJAG_02527","SJAG_04697","SJAG_00429","SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["mdh1delta","cox6delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","vps32delta","rad3delta","oar2delta","sty1delta","fum1delta","ras1delta","ned1delta","atf1delta","gpd1delta","cmp7delta","sdh3delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","tel1delta","gms1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","scd1delta","rad26delta","for3delta","scd2delta","vps4delta","cem1delta","rip1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"termid":"FYPO:0002058","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000674":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001408":null,"FYPO:0001690":null,"FYPO:0002058":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0042134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholecystokinin","termid":"PBO:0042134"}


id: GO:1900844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of monodictyphenone biosynthetic process","termid":"GO:1900843"},{"relation_name":"negatively_regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"down regulation of monodictyphenone biosynthetic process","type":"exact"},{"name":"down-regulation of monodictyphenone biosynthetic process","type":"exact"},{"name":"downregulation of monodictyphenone biosynthetic process","type":"exact"}],"termid":"GO:1900844"}


id: FYPO:0003617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cytochalasin D. Cells stop growing (and may die) at a concentration of cytochalasin D that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cytochalasin D","synonyms":[{"name":"hypersensitive to cytochalasin D","type":"exact"},{"name":"sensitive to cytochalasin D during mitotic cell cycle","type":"related"},{"name":"sensitive to cytochalasin D during vegetative growth","type":"exact"}],"termid":"FYPO:0003617"}


id: PBO:0061010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 3","termid":"PBO:0061010"}


id: PBO:0067806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 108","termid":"PBO:0067806"}


id: PBO:0068479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 58, pseudogene","termid":"PBO:0068479"}


id: PBO:0055548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2984","termid":"PBO:0055548"}


id: PBO:0064240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 3","termid":"PBO:0064240"}


id: PBO:0067038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 52, pseudogene","termid":"PBO:0067038"}


id: PBO:0051365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-31 (pseudogene)","termid":"PBO:0051365"}


id: GO:0141144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont damages or impairs host neutrophil extracellular traps. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21231972","PMID:25605868","PMID:16488875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host neutrophil extracellular traps","synonyms":[{"name":"symbiont-mediated perturbation of host neutrophil extracellular traps","type":"exact"}],"termid":"GO:0141144"}


id: FYPO:0006678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to chromium ions.","definition_xrefs":["PMID:30148840","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to chromium","synonyms":[{"name":"increased number of Rad22 foci during cellular response to chromium","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to chromium during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to chromium during vegetative growth","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to chromium ions","type":"exact"}],"termid":"FYPO:0006678"}


id: PBO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterised trans-sulfuration enzyme (predicted)","termid":"PBO:0002368"}


id: PBO:0091349
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rec12 is released from double-strand breaks covalently bound to oligonucleotides 17-27 nt long","termid":"PBO:0091349"}


id: PR:000025004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm2","pombase_gene_id":"SPAC513.03","synonyms":[{"name":"mfm2","type":"exact"}],"termid":"PR:000025004"}


id: GO:1902874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:16872597","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of horizontal cell localization","termid":"GO:1902872"},{"relation_name":"positively_regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of horizontal cell localization","synonyms":[{"name":"activation of horizontal cell localisation","type":"narrow"},{"name":"activation of horizontal cell localization","type":"narrow"},{"name":"activation of horizontal cell positioning","type":"narrow"},{"name":"activation of laminar positioning of retinal horizontal cell","type":"narrow"},{"name":"activation of retinal horizontal cell positioning","type":"narrow"},{"name":"positive regulation of horizontal cell localisation","type":"exact"},{"name":"positive regulation of horizontal cell positioning","type":"exact"},{"name":"positive regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"positive regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up regulation of horizontal cell localisation","type":"exact"},{"name":"up regulation of horizontal cell localization","type":"exact"},{"name":"up regulation of horizontal cell positioning","type":"exact"},{"name":"up regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up-regulation of horizontal cell localisation","type":"exact"},{"name":"up-regulation of horizontal cell localization","type":"exact"},{"name":"up-regulation of horizontal cell positioning","type":"exact"},{"name":"up-regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up-regulation of retinal horizontal cell positioning","type":"exact"},{"name":"upregulation of horizontal cell localisation","type":"exact"},{"name":"upregulation of horizontal cell localization","type":"exact"},{"name":"upregulation of horizontal cell positioning","type":"exact"},{"name":"upregulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"upregulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902874"}


id: GO:0070143
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89904],"is_not":false,"summary":null,"term":"GO:0070143"}]},"cv_name":"biological_process","definition":"The process of coupling alanine to alanyl-tRNA in a mitochondrion, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanyl-tRNA aminoacylation","termid":"GO:0006419"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0140053","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial alanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070143","terms_by_termid":{"GO:0070143":null}}


id: GO:0071585
data:
  {"annotated_genes":["SJAG_00988","SJAG_03497","SJAG_02599","SJAG_01344","SJAG_01351","SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89481,93232,104611,93193,93548,114322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cadmium ion. These may include transport of cadmium away from sensitive areas and to compartments or complexes whose purpose is sequestration of cadmium ion.","definition_xrefs":["PMID:16741752","GOC:BHF","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to cadmium ion","termid":"GO:1990170"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of cadmium ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071585","terms_by_termid":{"GO:0098849":null}}


id: GO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a DDT stimulus. DDT, dichlorodiphenyltrichloroethane, is a chlorinated hydrocarbon pesticide moderately toxic to humans and other animals.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DDT","synonyms":[{"name":"DDT resistance","type":"related"},{"name":"DDT susceptibility/resistance","type":"related"}],"termid":"GO:0046680"}


id: PATO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased occurrence","synonyms":[{"name":"increased incidence","type":"exact"}],"termid":"PATO:0002051"}


id: PBO:0079419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 2","termid":"PBO:0079419"}


id: GO:0097214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["PMID:20544854","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal membrane permeability","termid":"GO:0097213"},{"relation_name":"is_a","term_name":"positive regulation of membrane permeability","termid":"GO:1905710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of lysosomal membrane permeability","synonyms":[{"name":"positive regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097214"}


id: PBO:0070816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 46","termid":"PBO:0070816"}


id: PBO:0087385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; regulates transcription of sterol biosynthetic genes upon sterol depletion, after relocating from intracellular membranes to perinuclear foci; redundant activator of filamentation with UPC2, up-regulating the expression of genes involved in filamentous growth; contains Zn[2]-Cys[6] binuclear cluster; ECM22 has a paralog, UPC2, that arose from the whole genome duplication","termid":"PBO:0087385"}


id: GO:0008527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"taste receptor activity","synonyms":[{"name":"gustatory receptor","type":"exact"}],"termid":"GO:0008527"}


id: PBO:0073926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 14","termid":"PBO:0073926"}


id: PBO:0044066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9-like pseudogene 2","termid":"PBO:0044066"}


id: PBO:0056592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing glycosylphosphatidylinositol anchor 1","termid":"PBO:0056592"}


id: FYPO:0004173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to heat","synonyms":[{"name":"decreased protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to heat stress","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0004173"}


id: PBO:0026800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasome_core_complex_binding","termid":"PBO:0026800"}


id: PBO:0059533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Glu (GAA/G)","termid":"PBO:0059533"}


id: GO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + dTTP = diphosphate + dTDP-D-galactose.","definition_xrefs":["EC:2.7.7.32","RHEA:17165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"galactose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02329","MetaCyc:2.7.7.32-RXN"],"synonyms":[{"name":"dTDP galactose pyrophosphorylase activity","type":"related"},{"name":"dTDP-galactose diphosphorylase activity","type":"related"},{"name":"dTDP-galactose pyrophosphorylase activity","type":"related"},{"name":"dTTP:alpha-D-galactose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate thymidylyl transferase activity","type":"related"},{"name":"thymidine diphosphogalactose pyrophosphorylase activity","type":"related"},{"name":"thymidine triphosphate:alpha-D-galactose 1-phosphate thymidylyltransferase activity","type":"related"}],"termid":"GO:0047342"}


id: PR:Q9P6L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rim2 gene.","definition_xrefs":["UniProtKB:Q9P6L7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C688.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.09","synonyms":[{"name":"Spom972h-rim2","type":"exact"}],"termid":"PR:Q9P6L7"}


id: PBO:0073531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 2, endophilin A1","termid":"PBO:0073531"}


id: PBO:0058391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4763","termid":"PBO:0058391"}


id: PBO:0084395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084395"}


id: GO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5D-5-O-methyl-chiro-inositol + NADP+ = 2D-5-O-methyl-2,3,5/4,6-pentahydroxycyclohexanone + H+ + NADPH.","definition_xrefs":["RHEA:20437","EC:1.1.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-pinitol dehydrogenase activity","secondary_identifiers":["MetaCyc:D-PINITOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03498"],"synonyms":[{"name":"1D-3-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"},{"name":"5D-5-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047832"}


id: SO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_J_cluster","synonyms":[{"name":"D J cluster","type":"exact"},{"name":"D-J-CLUSTER","type":"exact"}],"termid":"SO:0000560"}


id: PBO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS ion channel protein 2 (predicted)","termid":"PBO:0002454"}


id: PBO:0073674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 3, pseudogene","termid":"PBO:0073674"}


