# terms

id: PBO:0063822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain and leucine rich repeat protein phosphatase 1","termid":"PBO:0063822"}


id: GO:0051912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme B + coenzyme M + methanophenazine = N-{7-[(2-sulfoethyl)dithio]heptanoyl}-3-O-phospho-L-threonine + dihydromethanophenazine.","definition_xrefs":["RHEA:18085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"CoB--CoM heterodisulfide reductase activity","secondary_identifiers":["EC:1.8.98.1","MetaCyc:1.8.98.1-RXN"],"synonyms":[{"name":"CoB-CoM heterodisulfide reductase activity","type":"exact"},{"name":"coenzyme B--coenzyme M heterodisulfide reductase activity","type":"exact"},{"name":"coenzyme B:coenzyme M:methanophenazine oxidoreductase activity","type":"related"},{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity","type":"related"},{"name":"heterodisulfide reductase activity","type":"broad"},{"name":"soluble heterodisulfide reductase activity","type":"related"}],"termid":"GO:0051912"}


id: FYPO:0007490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a mannosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal mannosyltransferase activity","termid":"FYPO:0007490"}


id: GO:0050174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine = phenylethylamine + CO2.","definition_xrefs":["MetaCyc:PHENYLALANINE-DECARBOXYLASE-RXN","EC:4.1.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phenylalanine decarboxylase activity","secondary_identifiers":["RHEA:19717"],"synonyms":[{"name":"L-phenylalanine carboxy-lyase (phenylethylamine-forming)","type":"exact"},{"name":"L-phenylalanine carboxy-lyase activity","type":"related"},{"name":"L-phenylalanine decarboxylase activity","type":"related"},{"name":"aromatic L-amino acid decarboxylase activity","type":"broad"}],"termid":"GO:0050174"}


id: PBO:0082351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; active as a hexamer; enhances the activity of ferric reductase (Fre1p); UTR1 has a paralog, YEF1, that arose from the whole genome duplication","termid":"PBO:0082351"}


id: GO:1904655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung alveolus development.","definition_xrefs":["PMID:23962064","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"positively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung alveolus development","synonyms":[{"name":"activation of alveolarization","type":"narrow"},{"name":"activation of alveologenesis","type":"narrow"},{"name":"activation of lung alveolus development","type":"narrow"},{"name":"positive regulation of alveolarization","type":"exact"},{"name":"positive regulation of alveologenesis","type":"exact"},{"name":"up regulation of alveolarization","type":"exact"},{"name":"up regulation of alveologenesis","type":"exact"},{"name":"up regulation of lung alveolus development","type":"exact"},{"name":"up-regulation of alveolarization","type":"exact"},{"name":"up-regulation of alveologenesis","type":"exact"},{"name":"up-regulation of lung alveolus development","type":"exact"},{"name":"upregulation of alveolarization","type":"exact"},{"name":"upregulation of alveologenesis","type":"exact"},{"name":"upregulation of lung alveolus development","type":"exact"}],"termid":"GO:1904655"}


id: PBO:0028633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mRNA_splicing,_via_spliceosome","termid":"PBO:0028633"}


id: PBO:0042277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 pseudogene 1","termid":"PBO:0042277"}


id: PBO:0085827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; gene expression increases in cultures shifted to a lower temperature; protein abundance increases in response to DNA replication stress","termid":"PBO:0085827"}


id: PBO:0040632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 1","termid":"PBO:0040632"}


id: GO:0100011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that positively_regulates fever generation.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"},{"relation_name":"positively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fever generation by prostaglandin secretion","termid":"GO:0100011"}


id: PBO:0087287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal transducing MEK kinase; involved in pheromone response and pseudohyphal/invasive growth pathways where it phosphorylates Ste7p, and the high osmolarity response pathway, via phosphorylation of Pbs2p; regulated by Ste20p and Ste50p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087287"}


id: GO:0021533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation in hindbrain","termid":"GO:0021533"}


id: PR:O13621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anoctamin-10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C691.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.05c","secondary_identifiers":["UniProtKB:O13621"],"synonyms":[{"name":"Spom972h-ANO10","type":"exact"}],"termid":"PR:O13621"}


id: GO:0019800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptide chains mediated by a chondroitin 4-sulfate glycosaminoglycan that originates from a typical O-glycosidic link to serine of one chain; the other chain is esterified, via the alpha-carbon of its C-terminal Asp, to C-6 of an internal N-acetylgalactosamine of the glycosaminoglycan chain.","definition_xrefs":["PMID:1898736","RESID:AA0219"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan (obsolete GO:0019800)","synonyms":[{"name":"peptide cross-linking via chondroitin 4-sulphate glycosaminoglycan","type":"exact"}],"termid":"GO:0019800"}


id: RO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-chemical-role r iff c has-role r and r is a chemical role (CHEBI:51086)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_chemical_role","termid":"RO:0002262"}


id: PBO:0028481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activation_of_monopolar_cell_growth_at_new_end","termid":"PBO:0028481"}


id: PBO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 47","termid":"PBO:0045857"}


id: PBO:0080756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine dehydrogenase","termid":"PBO:0080756"}


id: GO:0060021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"roof of mouth development","synonyms":[{"name":"palatum development","type":"exact"}],"termid":"GO:0060021"}


id: PBO:0038811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 18","termid":"PBO:0038811"}


id: MOD:01757
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01757"}


id: PBO:0031410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_vegetative_cell","termid":"PBO:0031410"}


id: PBO:0055806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 2","termid":"PBO:0055806"}


id: PBO:0085158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide exchange factor for Gsp1p; localizes to the nucleus, required for nucleocytoplasmic trafficking of macromolecules; suppressor of the pheromone response pathway; potentially phosphorylated by Cdc28p; human homolog of the RAN GEF, RCC1, can complement a temperature sensitive point mutant","termid":"PBO:0085158"}


id: PBO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_extension","termid":"PBO:0006165"}


id: PBO:0031603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_S_phase","termid":"PBO:0031603"}


id: PBO:0042401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 7","termid":"PBO:0042401"}


id: PBO:0064446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC5 centriolar protein","termid":"PBO:0064446"}


id: PBO:0061466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2 pseudogene 1","termid":"PBO:0061466"}


id: PBO:0049595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 13","termid":"PBO:0049595"}


id: PBO:0073889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A5 and MMP9 antisense RNA 1","termid":"PBO:0073889"}


id: GO:0010080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a floral meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem growth","termid":"GO:0010075"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral meristem growth","termid":"GO:0010451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral meristem growth","synonyms":[{"name":"regulation of floral meristem size","type":"exact"}],"termid":"GO:0010080"}


id: GO:1990099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the protein-DNA complexes that contain a DNA helicase and associated protein(s) at the origin of replication, and build up to assembling the core primosome. The associated protein(s) chaperone the helicase to the DNA, and assembly of the pre-primosome is essential for the initiation or restart of replication. Pre-primosome complexes lack a primase component.","definition_xrefs":["GOC:bhm","PMID:20129058","PMID:18179598","PMID:8663105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"pre-primosome complex","synonyms":[{"name":"pre-priming complex","type":"exact"},{"name":"pre-primosome","type":"exact"},{"name":"pre-replication complex","type":"related"},{"name":"preprimosome","type":"exact"},{"name":"preprimosome complex","type":"exact"},{"name":"prereplication complex","type":"exact"}],"termid":"GO:1990099"}


id: GO:0160160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nicotine catabolic process.","definition_xrefs":["PMID:15838033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"positively_regulates","term_name":"nicotine catabolic process","termid":"GO:0019608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nicotine catabolic process","termid":"GO:0160160"}


id: GO:0097136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of members of the Bcl-2 family of anti- and proapoptotic regulators. Bcl-2 proteins respond to cues from various forms of intracellular stress, such as DNA damage or cytokine deprivation, and interact with opposing family members to determine whether or not the caspase proteolytic cascade should be unleashed.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Bcl-2 family protein complex","termid":"GO:0097136"}


id: GO:0052590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: sn-glycerol 3-phosphate + a ubiquinone = glycerone phosphate + a ubiquinol.","definition_xrefs":["MetaCyc:RXN0-5260"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity (obsolete GO:0052590)","termid":"GO:0052590"}


id: GO:0070348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell proliferation","termid":"GO:0070345"},{"relation_name":"is_a","term_name":"regulation of brown fat cell proliferation","termid":"GO:0070347"},{"relation_name":"negatively_regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of brown fat cell proliferation","synonyms":[{"name":"down regulation of brown fat cell proliferation","type":"exact"},{"name":"down-regulation of brown fat cell proliferation","type":"exact"},{"name":"downregulation of brown fat cell proliferation","type":"exact"},{"name":"inhibition of brown fat cell proliferation","type":"narrow"},{"name":"negative regulation of brown adipocyte proliferation","type":"exact"},{"name":"negative regulation of brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070348"}


id: GO:2000894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellotriose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellotriose catabolic process","synonyms":[{"name":"cellotriose catabolism","type":"exact"}],"termid":"GO:2000894"}


id: PBO:0090560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ZIP zinc transmembrane transporter Zrt1","termid":"PBO:0090560"}


id: PBO:0052459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 8","termid":"PBO:0052459"}


id: PBO:0041593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5B","termid":"PBO:0041593"}


id: PBO:0029977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_export_from_nucleus","termid":"PBO:0029977"}


id: MOD:00607
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:288","PubMed:7949339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxoindolealanine lactone","synonyms":[{"name":"Trp->Oxolactone","type":"related"},{"name":"Tryptophan oxidation to oxolactone","type":"related"}],"termid":"MOD:00607"}


id: PBO:0082559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide synthase component; involved in synthesis of ceramide from C26(acyl)-coenzyme A and dihydrosphingosine or phytosphingosine, functionally equivalent to Lac1p; forms ER foci upon DNA replication stress; homolog of human CERS2, a tumor metastasis suppressor gene whose silencing enhances invasion/metastasis of prostate cancer cells; LAG1 has a paralog, LAC1, that arose from the whole genome duplication","termid":"PBO:0082559"}


id: PBO:0028604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_xanthine_nitrogen_source","termid":"PBO:0028604"}


id: PBO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.16","termid":"PBO:0000732"}


id: GO:0016506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function held by products which directly activate any step in the process of apoptosis.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis activator activity (obsolete GO:0016506)","synonyms":[{"name":"apoptosis activator activity","type":"exact"}],"termid":"GO:0016506"}


id: PR:O74497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain-containing protein C285.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.10c","synonyms":[{"name":"Spom972h-SPCC285.10c","type":"exact"}],"termid":"PR:O74497"}


id: PBO:0043312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 1","termid":"PBO:0043312"}


id: PR:000046670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe sre2 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor sre2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"Spom-sre2","type":"exact"},{"name":"sterol regulatory element-binding protein 2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046670"}


id: PBO:0062264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 1","termid":"PBO:0062264"}


id: GO:0052780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chitobioses, a family of compounds derived from chitin and based on the structure of D-glucosaminyl-(1->4)-D-glucosamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino disaccharide metabolic process","termid":"GO:0052779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitobiose metabolic process","termid":"GO:0052780"}


id: GO:0070730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic AMP (cAMP), into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cAMP transport","synonyms":[{"name":"cyclic AMP transport","type":"exact"}],"termid":"GO:0070730"}


id: PBO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 2","termid":"PBO:0043543"}


id: PBO:0055735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 1","termid":"PBO:0055735"}


id: GO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of lysophospholipids from one side of a membrane to the other. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:phosphate symporter activity","termid":"GO:0005436"},{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"lysophospholipid:sodium symporter activity","synonyms":[{"name":"lysophospholipid transporter activity","type":"broad"}],"termid":"GO:0051978"}


id: GO:0010619
data:
  {"annotated_genes":["SJAG_00266","SJAG_02311","SJAG_02444","SJAG_03081","SJAG_04312","SJAG_01754","SJAG_01254","SJAG_00472","SJAG_00574","SJAG_01699","SJAG_04026","SJAG_01245","SJAG_02426","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90405,98014,102069,102661,103017,105198,105710,111687,112728],"is_not":false,"summary":null,"term":"GO:0010619"},{"annotations":[96605,88271,112550,88934,104148],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by glucose binding to its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:tb","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"part_of","term_name":"glucose mediated signaling pathway","termid":"GO:0010255"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of adenylate cyclase activity by glucose involved in G-protein signaling","type":"exact"},{"name":"activation of adenylate cyclase activity by glucose-triggered G-protein signaling pathway","type":"exact"},{"name":"activation of adenylate cyclase activity by glucose-triggered G-protein signalling pathway","type":"exact"},{"name":"glucose-sensing PKA pathway","type":"exact"}],"termid":"GO:0010619","terms_by_termid":{"GO:0010619":null,"GO:0110034":null}}


id: GO:0061077
data:
  {"annotated_genes":["SJAG_02919","SJAG_02014","SJAG_02367","SJAG_04228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90039,91220,112950,113975],"is_not":false,"summary":null,"term":"GO:0061077"}]},"cv_name":"biological_process","definition":"The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02014":null,"SJAG_02367":null,"SJAG_02919":null,"SJAG_04228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006457","GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chaperone-mediated protein folding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061077","terms_by_termid":{"GO:0061077":null}}


id: GO:0048934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"}


id: GO:2000303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"},{"relation_name":"regulates","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of ceramide biosynthetic process","synonyms":[{"name":"regulation of ceramide anabolism","type":"exact"},{"name":"regulation of ceramide biosynthesis","type":"exact"},{"name":"regulation of ceramide formation","type":"exact"},{"name":"regulation of ceramide synthesis","type":"exact"}],"termid":"GO:2000303"}


id: SO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon that has been redefined at translation. The redefinition may be as a result of translational bypass, translational frameshifting or stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_codon","synonyms":[{"name":"recoded codon","type":"exact"}],"termid":"SO:0000145"}


id: GO:0097440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.","definition_xrefs":["NIF_Subcellular:sao273773228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical dendrite","termid":"GO:0097440"}


id: PBO:0039748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O","termid":"PBO:0039748"}


id: FYPO:0000207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to caffeine is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to caffeine","synonyms":[{"name":"abnormal cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0000207"}


id: PBO:0075585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 9","termid":"PBO:0075585"}


id: PR:Q09869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12075:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.05c","secondary_identifiers":["UniProtKB:Q09869"],"synonyms":[{"name":"SPAC12G12.05c","type":"related"},{"name":"Spom972h-TAF9","type":"exact"},{"name":"TBP-associated factor 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09869"}


id: PATO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distribution which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased position","termid":"PATO:0001475"},{"relation_name":"is_a","term_name":"distributed","termid":"PATO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased distribution","synonyms":[{"name":"high distribution","type":"exact"}],"termid":"PATO:0001671"}


id: GO:0030119
data:
  {"annotated_genes":["SJAG_04931","SJAG_04609","SJAG_00104","SJAG_02805","SJAG_02453","SJAG_00379","SJAG_01167","SJAG_00108","SJAG_01809","SJAG_03726","SJAG_04565","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114999,109179,97291,108962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[104512,107770,92439,107829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"},{"annotations":[90361,85119,92309,107669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030123"},{"annotations":[107672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030131"}]},"cv_name":"cellular_component","definition":"Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa).","definition_xrefs":["PMID:10611976","GOC:mah","PMID:15473838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AP-type membrane coat adaptor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin adaptor","type":"related"}],"termid":"GO:0030119","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030123":null,"GO:0030131":null}}


id: PBO:0028095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_replication_origin_binding","termid":"PBO:0028095"}


id: GO:0045969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone biosynthetic process","termid":"GO:0007557"},{"relation_name":"is_a","term_name":"positive regulation of juvenile hormone metabolic process","termid":"GO:0045929"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"activation of juvenile hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of juvenile hormone anabolism","type":"exact"},{"name":"positive regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"positive regulation of juvenile hormone formation","type":"exact"},{"name":"positive regulation of juvenile hormone synthesis","type":"exact"},{"name":"stimulation of juvenile hormone biosynthetic process","type":"narrow"},{"name":"up regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"up-regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"upregulation of juvenile hormone biosynthetic process","type":"exact"}],"termid":"GO:0045969"}


id: GO:0102386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylethanol + NADP = phenylacetaldehyde + NADPH + H+.","definition_xrefs":["PMID:17644147","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phenylacetaldehyde reductase activity","secondary_identifiers":["MetaCyc:RXN-13536"],"termid":"GO:0102386"}


id: PBO:0069121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 370, pseudogene","termid":"PBO:0069121"}


id: PBO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression repressed by glucose","termid":"PBO:0000390"}


id: GO:1904312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold(3+) stimulus.","definition_xrefs":["PMID:16206274","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to gold(3+)","termid":"GO:1904311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gold(3+)","termid":"GO:1904312"}


id: PBO:0039980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 3","termid":"PBO:0039980"}


id: PBO:0057618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1184-1","termid":"PBO:0057618"}


id: GO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0071554","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"callose deposition in cell wall","synonyms":[{"name":"callose localization in cell wall","type":"exact"},{"name":"cell wall callose deposition","type":"exact"},{"name":"cell wall callose localization","type":"exact"}],"termid":"GO:0052543"}


id: GO:0030041
data:
  {"annotated_genes":["SJAG_00521","SJAG_01894","SJAG_01993","SJAG_04479","SJAG_03086","SJAG_04703","SJAG_02700","SJAG_04100","SJAG_02245","SJAG_00677","SJAG_02566","SJAG_01943","SJAG_04982","SJAG_01268","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64217,88507,90009,93900,95005],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[88508,84488,88693,110492,114764,95066],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[98912,86880,86035,101331,97919],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93903,110495],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0030036","GO:0065003"],"is_obsolete":false,"name":"actin filament polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin polymerization","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0030041","terms_by_termid":{"GO:0030041":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15","termid":"PBO:0072122"}


id: FYPO:0000299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony (obsolete FYPO:0000299)","synonyms":[{"name":"inviable microcolony formation","type":"exact"},{"name":"microcolony formation","type":"broad"}],"termid":"FYPO:0000299"}


id: PBO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 1","termid":"PBO:0071378"}


id: GO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the relaxation of smooth muscle in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of relaxation of muscle in another organism","termid":"GO:0044616"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of relaxation of smooth muscle in another organism","synonyms":[{"name":"modulation of relaxation of smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of smooth muscle in other organism","type":"exact"}],"termid":"GO:0044617"}


id: GO:0075107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of the host adenylate cyclase activity, which involves catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host adenylate cyclase activity (obsolete GO:0075107)","synonyms":[{"name":"positive regulation by symbiont of host 3',5'-cyclic AMP synthetase activity","type":"exact"},{"name":"positive regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity","type":"exact"},{"name":"positive regulation by symbiont of host adenyl cyclase activity","type":"exact"},{"name":"positive regulation by symbiont of host adenylyl cyclase activity","type":"exact"},{"name":"positive regulation by symbiont of host adenylylcyclase activity","type":"exact"}],"termid":"GO:0075107"}


id: GO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature B cell becomes committed to become a B-1 B cell.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell lineage commitment","termid":"GO:0002326"},{"relation_name":"part_of","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell lineage commitment","synonyms":[{"name":"B-1 B lymphocyte lineage commitment","type":"exact"},{"name":"B-1 B-cell lineage commitment","type":"exact"},{"name":"B-1 B-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002336"}


id: PBO:0067566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 719, pseudogene","termid":"PBO:0067566"}


id: PBO:0057846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3158-2","termid":"PBO:0057846"}


id: GO:0033116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.","definition_xrefs":["GOC:pr","PMID:16723730","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment membrane","synonyms":[{"name":"ER-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:0033116"}


id: PBO:0058875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10226","termid":"PBO:0058875"}


id: PBO:0058980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLIP antisense RNA 1","termid":"PBO:0058980"}


id: PBO:0043874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB3L2 antisense RNA 1","termid":"PBO:0043874"}


id: PR:O13851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.12","synonyms":[{"name":"Spom972h-dlp1","type":"exact"},{"name":"all-trans-decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"decaprenyl pyrophosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13851"}


id: GO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of receptor activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of receptor activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044511"}


id: GO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any complex that mediates dynamic changes in eukaryotic chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling complex (obsolete GO:0016585)","synonyms":[{"name":"chromatin remodeling complex","type":"exact"},{"name":"chromatin remodelling complex","type":"exact"},{"name":"nucleosome remodeling complex","type":"exact"}],"termid":"GO:0016585"}


id: PBO:0004077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GDP/GTP exchange factor","termid":"PBO:0004077"}


id: GO:2000317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 17 type immune response","synonyms":[{"name":"negative regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000317"}


id: PBO:0055030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2445","termid":"PBO:0055030"}


id: PBO:0085772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII-coated vesicles; forms a complex with Erv46p; involved in the membrane fusion stage of transport; has homology to human ERGIC2 (PTX1) protein","termid":"PBO:0085772"}


id: GO:1990871
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the assembly of the V-ATPase complex. In the budding yeast Saccharomyces cerevisiae, this complex consists of Vma12p and Vma22p.","definition_xrefs":["GOC:rb","PMID:9660861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Vma12-Vma22 assembly complex","termid":"GO:1990871"}


id: GO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal hypha.","definition_xrefs":["PMID:15976451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"hyphal tip","termid":"GO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"hyphal tip polarisome","termid":"GO:0031562"}


id: PBO:0074433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 33","termid":"PBO:0074433"}


id: PR:Q9UT75
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA dimethylallyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00683","PANTHER:PTHR11088:SF21","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dimethylallyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.15","secondary_identifiers":["UniProtKB:Q9UT75"],"synonyms":[{"name":"IPP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TRIT1","type":"exact"},{"name":"isopentenyl-diphosphate: tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT75"}


id: PBO:0085831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0085831"}


id: GO:0008220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes that cause necrosis, the death of tissues, in another organism.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete necrosis (obsolete GO:0008220)","synonyms":[{"name":"necrosis","type":"exact"}],"termid":"GO:0008220"}


id: PBO:0067983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 285","termid":"PBO:0067983"}


id: PATO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001073 relative impulse (obsolete PATO:0001073)","termid":"PATO:0001073"}


id: PR:O74395
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- str1 gene.","definition_xrefs":["UniProtKB:O74395","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore iron transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.09","synonyms":[{"name":"Spom972h-str1","type":"exact"}],"termid":"PR:O74395"}


id: PBO:0027535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027535"}


id: PBO:0088296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21","termid":"PBO:0088296"}


id: PBO:0077540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM252 divergent transcript","termid":"PBO:0077540"}


id: GO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons following their loss or damage.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"},{"relation_name":"is_a","term_name":"response to axon injury","termid":"GO:0048678"},{"relation_name":"is_a","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon regeneration","termid":"GO:0031103"}


id: PBO:0046058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit I","termid":"PBO:0046058"}


id: FYPO:0004873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 2-oxoglutarate-dependent dioxygenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal 2-oxoglutarate dioxygenase activity","termid":"FYPO:0004871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased 2-oxoglutarate dioxygenase activity","synonyms":[{"name":"decreased 2-oxoglutarate-dependent dioxygenase activity","type":"exact"},{"name":"decreased oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"},{"name":"reduced 2-oxoglutarate dioxygenase activity","type":"exact"}],"termid":"FYPO:0004873"}


id: PATO:0000521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000521 drug sensitivity value (obsolete PATO:0000521)","termid":"PATO:0000521"}


id: PBO:0045437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 5","termid":"PBO:0045437"}


id: GO:0030342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-24 of 1-alpha,25-hydroxycholecalciferol (25-hydroxyvitamin D3; calcitriol).","definition_xrefs":["PMID:8506296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 24-hydroxylase activity","termid":"GO:0070576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-alpha,25-dihydroxyvitamin D3 24-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-5602004","Reactome:R-HSA-211950","Reactome:R-HSA-209765"],"synonyms":[{"name":"1,25-(OH)2D3 24-hydroxylase activity","type":"exact"},{"name":"calcitriol 24-hydroxylase activity","type":"exact"}],"termid":"GO:0030342"}


id: PBO:0055868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat protein 1","termid":"PBO:0055868"}


id: PATO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality which is held by the bearer when the latter is able to perform additional or different function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"having extra function","synonyms":[{"name":"having supernumerary functions","type":"exact"}],"termid":"PATO:0001559"}


id: PBO:0076345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 12","termid":"PBO:0076345"}


id: GO:0140461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The organization of chromatin into heterochromatin at the subtelomeric region of a chromosome.","definition_xrefs":["PMID:26744419"],"gene_count":0,"genotype_count":0,"name":"obsolete subtelomeric heterochromatin organization (obsolete GO:0140461)","termid":"GO:0140461"}


id: PBO:0068846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 84, pseudogene","termid":"PBO:0068846"}


id: PBO:0079901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase binding protein","termid":"PBO:0079901"}


id: PBO:0069390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 650, pseudogene","termid":"PBO:0069390"}


id: FYPO:0008057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed  ability of an enzyme to catalyze consecutive reactions without releasing the substrate (i.e. template) is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal enzyme processivity","termid":"FYPO:0008057"}


id: PBO:0068607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 58, pseudogene","termid":"PBO:0068607"}


id: GO:0033511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of luteolin, 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luteolin metabolic process","termid":"GO:0033510"},{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteolin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5060"],"synonyms":[{"name":"luteolin anabolism","type":"exact"},{"name":"luteolin biosynthesis","type":"exact"},{"name":"luteolin formation","type":"exact"},{"name":"luteolin synthesis","type":"exact"}],"termid":"GO:0033511"}


id: PBO:0056889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midline 1","termid":"PBO:0056889"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: GO:0097176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving epoxides, compounds in which an oxygen atom is directly attached to two adjacent or non-adjacent carbon atoms of a carbon chain or ring system; thus cyclic ethers.","definition_xrefs":["PMID:15822179","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"epoxide metabolic process","synonyms":[{"name":"epoxide metabolism","type":"exact"}],"termid":"GO:0097176"}


id: PBO:0089667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CP2 mannose-ethanolamine phosphotransferase GPI anchor biosynthesis protein Gpi7","termid":"PBO:0089667"}


id: GO:0061220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric macula densa over time, from its formation to the mature structure. The mesonephric macula densa is an area of specialized cells in the distal tubule of the mesonephros that makes contact with the vascular pole of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"macula densa development","termid":"GO:0072024"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric macula densa development","termid":"GO:0061220"}


id: GO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-aminocyclopropane-1-carboxylic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0009961"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0071213"}


id: GO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The targeting and directed movement of proteins into a cell or organelle. Not all import involves an initial targeting event.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein import","synonyms":[{"name":"protein uptake","type":"exact"}],"termid":"GO:0017038"}


id: PR:Q9P7C8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein SLD5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03471","PRO:DNx","PANTHER:PTHR21206:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein sld5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.21c","secondary_identifiers":["UniProtKB:Q9P7C8"],"synonyms":[{"name":"Spom972h-GINS4","type":"exact"}],"termid":"PR:Q9P7C8"}


id: GO:0085030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by symbiont gene products that enables a symbiotic interaction with a host organism, that is beneficial to the host organism.","definition_xrefs":["GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiotic process benefiting host","synonyms":[{"name":"mutualism","type":"related"}],"termid":"GO:0085030"}


id: GO:0016575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of acetyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deacetylation (obsolete GO:0016575)","termid":"GO:0016575"}


id: PBO:0005403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase (predicted)","termid":"PBO:0005403"}


id: GO:0103068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C4 + a standard alpha amino acid = leukotriene D4 + an (gamma-L-glutamyl)-L-amino acid.","definition_xrefs":["PMID:9139674","PMID:1676842","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"leukotriene C4 gamma-glutamyl transferase activity","secondary_identifiers":["EC:2.3.2.2","MetaCyc:RXN66-336"],"termid":"GO:0103068"}


id: GO:0071745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and sometimes complexed with J chain or J chain and secretory component. An IgA immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgA immunoglobulin complex","synonyms":[{"name":"IgA1 antibody","type":"narrow"},{"name":"IgA2 antibody","type":"narrow"}],"termid":"GO:0071745"}


id: GO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in B cells.","definition_xrefs":["GOC:jal","ISBN:0781735149","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction","synonyms":[{"name":"B lymphocyte tolerance induction","type":"exact"},{"name":"B-cell tolerance induction","type":"exact"},{"name":"B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002514"}


id: MOD:00431
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue with a secondary loss of a neutral molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified residue with a secondary neutral loss","synonyms":[{"name":"NLModRes","type":"exact"}],"termid":"MOD:00431"}


id: PBO:0054613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2018","termid":"PBO:0054613"}


id: PBO:0050559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine rich carboxyl terminus 1","termid":"PBO:0050559"}


id: PBO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomerase_holoenzyme_complex_assembly","termid":"PBO:0034454"}


id: GO:0003774
data:
  {"annotated_genes":["SJAG_00773","SJAG_00930","SJAG_02384","SJAG_03011","SJAG_03703","SJAG_04745","SJAG_02848","SJAG_02286","SJAG_04001","SJAG_02431","SJAG_02336","SJAG_00332","SJAG_01297","SJAG_00031","SJAG_01546","SJAG_00042","SJAG_01613","SJAG_00851","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061791"},{"annotations":[98943,96123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"},{"annotations":[99439,114016,112356,93832,104321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000146"},{"annotations":[92957,90953,85177,61057,99725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003777"},{"annotations":[95404,92958,84000,90954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[87341,90955,74721,99726,100082,104450,99927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"Generation of force resulting in movement, for example along a microfilament or microtubule, or in torque resulting in membrane scission or rotation of a flagellum. The energy required is obtained either from the hydrolysis of a nucleoside triphosphate or by an electrochemical proton gradient (proton-motive force).","definition_xrefs":["PMID:29716949","GOC:vw","GOC:mah","PMID:11242086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02431":null,"SJAG_02848":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04745":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"cytoskeletal motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1861595"],"synonyms":[{"name":"motor activity","type":"broad"}],"termid":"GO:0003774","terms_by_termid":{"GO:0000146":null,"GO:0003777":null,"GO:0008569":null,"GO:0008574":null,"GO:0061791":null,"GO:1990606":null}}


id: _global:directly_negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulated_by","secondary_identifiers":["RO:0002023"],"termid":"_global:directly_negatively_regulated_by"}


id: PBO:0049113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 176","termid":"PBO:0049113"}


id: PBO:0064959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 11","termid":"PBO:0064959"}


id: GO:0003339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"regulates","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003339"}


id: PBO:0082835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis","termid":"PBO:0082835"}


id: GO:0008886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H2O + NADP+ = 3-phospho-D-glycerate + 2 H+ + NADPH.","definition_xrefs":["RHEA:14669","EC:1.2.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity","secondary_identifiers":["KEGG_REACTION:R01058","MetaCyc:1.2.1.9-RXN"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:NADP+ oxidoreductase activity","type":"exact"},{"name":"NADP-glyceraldehyde phosphate dehydrogenase","type":"broad"},{"name":"NADP-glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"dehydrogenase, glyceraldehyde phosphate (nicotinamide adenine dinucleotide phosphate)","type":"broad"},{"name":"glyceraldehyde 3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde phosphate dehydrogenase (NADP)","type":"broad"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde-3-phosphate:NADP reductase activity","type":"exact"},{"name":"nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"triosephosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0008886"}


id: GO:0098045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus baseplate.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus baseplate assembly","termid":"GO:0098045"}


id: GO:1901429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of syringal lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of syringal lignin biosynthetic process","termid":"GO:1901428"},{"relation_name":"negatively_regulates","term_name":"syringal lignin biosynthetic process","termid":"GO:1901066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syringal lignin biosynthetic process","synonyms":[{"name":"down regulation of S-lignin biosynthetic process","type":"exact"},{"name":"down regulation of syringal lignin anabolism","type":"exact"},{"name":"down regulation of syringal lignin biosynthesis","type":"exact"},{"name":"down regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"down regulation of syringal lignin formation","type":"exact"},{"name":"down regulation of syringal lignin synthesis","type":"exact"},{"name":"down-regulation of S-lignin biosynthetic process","type":"exact"},{"name":"down-regulation of syringal lignin anabolism","type":"exact"},{"name":"down-regulation of syringal lignin biosynthesis","type":"exact"},{"name":"down-regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"down-regulation of syringal lignin formation","type":"exact"},{"name":"down-regulation of syringal lignin synthesis","type":"exact"},{"name":"downregulation of S-lignin biosynthetic process","type":"exact"},{"name":"downregulation of syringal lignin anabolism","type":"exact"},{"name":"downregulation of syringal lignin biosynthesis","type":"exact"},{"name":"downregulation of syringal lignin biosynthetic process","type":"exact"},{"name":"downregulation of syringal lignin formation","type":"exact"},{"name":"downregulation of syringal lignin synthesis","type":"exact"},{"name":"inhibition of S-lignin biosynthetic process","type":"exact"},{"name":"inhibition of syringal lignin anabolism","type":"exact"},{"name":"inhibition of syringal lignin biosynthesis","type":"exact"},{"name":"inhibition of syringal lignin biosynthetic process","type":"narrow"},{"name":"inhibition of syringal lignin formation","type":"exact"},{"name":"inhibition of syringal lignin synthesis","type":"exact"},{"name":"negative regulation of S-lignin biosynthetic process","type":"exact"},{"name":"negative regulation of syringal lignin anabolism","type":"exact"},{"name":"negative regulation of syringal lignin biosynthesis","type":"exact"},{"name":"negative regulation of syringal lignin formation","type":"exact"},{"name":"negative regulation of syringal lignin synthesis","type":"exact"}],"termid":"GO:1901429"}


id: PBO:0071596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 13","termid":"PBO:0071596"}


id: GO:1901888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell junction assembly","termid":"GO:1901888"}


id: GO:0035185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first nine mitotic division cycles of the insect embryo, during which the dividing nuclei lie deep in the interior of the egg and divide nearly synchronously. This is the first phase of the syncytial period where nuclei divide in a common cytoplasm without cytokinesis.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"},{"relation_name":"is_a","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}


id: PBO:0082860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of TRAPP complexes I, II and IV; transport protein particle (TRAPP) complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII, and IV); proposed subunit of a novel complex, TRAPPIV, that may function redundantly with TRAPPIII as a GEF that activates Ypt1 during autophagy","termid":"PBO:0082860"}


id: PBO:0026828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026828"}


id: GO:0052661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-propane-1,2-diol + NAD+ = (S)-lactaldehyde + NADH + H+.","definition_xrefs":["RHEA:15933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactaldehyde reductase activity","termid":"GO:0008912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"S-lactaldehyde reductase activity","secondary_identifiers":["KEGG_REACTION:R02258","MetaCyc:LACTALDREDUCT-RXN"],"synonyms":[{"name":"(S)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"L-lactaldehyde:propanediol oxidoreductase activity","type":"related"}],"termid":"GO:0052661"}


id: PBO:0085307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase that is highly specific for ADP-ribose 1''-phosphate; a tRNA splicing metabolite; may have a role in regulation of tRNA splicing","termid":"PBO:0085307"}


id: RO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A biotic interaction relationship in which one partner is an organism and the other partner is inorganic. For example, the relationship between a sponge and the substrate to which is it anchored.","direct_ancestors":[{"relation_name":"is_a","term_name":"biotically_interacts_with","termid":"RO:0002437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in_a_abiotic-biotic_interaction_with","synonyms":[{"name":"semibiotically interacts with","type":"related"}],"termid":"RO:0002446"}


id: PBO:0054329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1722","termid":"PBO:0054329"}


id: PBO:0055313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2741","termid":"PBO:0055313"}


id: PBO:0082240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of chaperonin-containing T-complex; complex mediates protein folding in the cytosol; involved in actin cytoskeleton maintenance; overexpression in neurons suppresses formation of pathogenic conformations of huntingtin protein","termid":"PBO:0082240"}


id: PATO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased quality","termid":"PATO:0002300"}


id: PR:000050533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me2(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf2/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050533"}


id: GO:0061393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:dph","PMID:12086627","PMID:9858577"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to osmotic stress (obsolete GO:0061393)","termid":"GO:0061393"}


id: GO:0019938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; occurs in mammals in proteins as yet unidentified by a mechanism probably analogous to that of transglutaminase reactions.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic (obsolete GO:0019938)","termid":"GO:0019938"}


id: FYPO:0004700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is bent along the long axis. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"bent cell","termid":"FYPO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"bent vegetative cell","synonyms":[{"name":"bent cell during vegetative growth","type":"exact"},{"name":"bent vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bent during vegetative growth","type":"exact"}],"termid":"FYPO:0004700"}


id: GO:1903783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["PMID:19376779","GOC:nc","GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"negatively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium ion import across plasma membrane","synonyms":[{"name":"down regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"down-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"downregulation of sodium ion import across plasma membrane","type":"exact"},{"name":"inhibition of sodium ion import across plasma membrane","type":"narrow"}],"termid":"GO:1903783"}


id: FYPO:0000697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}


id: PBO:0080341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 105 pseudogene","termid":"PBO:0080341"}


id: PR:O94235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RAF proto-oncogene serine/threonine-protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02427","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase mph1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.01","secondary_identifiers":["UniProtKB:O94235"],"synonyms":[{"name":"Spom972h-RAF1","type":"exact"}],"termid":"PR:O94235"}


id: GO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule organization","synonyms":[{"name":"dense core granule organisation","type":"exact"}],"termid":"GO:0061109"}


id: GO:1905496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of triplex DNA binding.","definition_xrefs":["GO_REF:0000059","PMID:26503245","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of triplex DNA binding","termid":"GO:1905496"}


id: PR:O74841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An FAD synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23293:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.04c","secondary_identifiers":["UniProtKB:O74841"],"synonyms":[{"name":"FAD pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FLAD1","type":"exact"},{"name":"flavin adenine dinucleotide synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74841"}


id: GO:0017041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine + H2O = lactosyl-N-acylsphingosine + D-galactose.","definition_xrefs":["EC:3.2.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosylgalactosylglucosylceramidase activity (obsolete GO:0017041)","synonyms":[{"name":"D-galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"ceramide trihexosidase activity","type":"related"},{"name":"ceramidetrihexosidase activity","type":"related"},{"name":"ceramidetrihexoside alpha-galactosidase activity","type":"related"},{"name":"trihexosyl ceramide galactosidase activity","type":"related"},{"name":"trihexosylceramide alpha-galactosidase activity","type":"related"}],"termid":"GO:0017041"}


id: GO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a plastid.","definition_xrefs":["GOC:jid","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid membrane","termid":"GO:0055035"}


id: PBO:0054630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2035","termid":"PBO:0054630"}


id: PBO:0080872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YME1 like 1 ATPase","termid":"PBO:0080872"}


id: PBO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 3","termid":"PBO:0060338"}


id: GO:0070512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 20 of histone H4.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H4-K20 methylation (obsolete GO:0070512)","synonyms":[{"name":"activation of histone H4-K20 methylation","type":"narrow"},{"name":"stimulation of histone H4-K20 methylation","type":"narrow"},{"name":"up regulation of histone H4-K20 methylation","type":"exact"},{"name":"up-regulation of histone H4-K20 methylation","type":"exact"},{"name":"upregulation of histone H4-K20 methylation","type":"exact"}],"termid":"GO:0070512"}


id: PATO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001120 relative momentum value (obsolete PATO:0001120)","termid":"PATO:0001120"}


id: PBO:0017708
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae BET2","termid":"PBO:0017708"}


id: FYPO:0007470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone modification during G0","synonyms":[{"name":"abnormal histone modification during cell quiescence","type":"exact"},{"name":"abnormal histone modification during quiescence","type":"exact"}],"termid":"FYPO:0007470"}


id: GO:0032472
data:
  {"annotated_genes":["SJAG_04096","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86902],"is_not":false,"summary":null,"term":"GO:0032472"},{"annotations":[87386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[104850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions (Ca2+) into, out of or within the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"Golgi calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi calcium transport","type":"exact"}],"termid":"GO:0032472","terms_by_termid":{"GO:0032472":null,"GO:0061454":null,"GO:0061856":null}}


id: FYPO:0002533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"abnormal protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002533"}


id: PBO:0067765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 65","termid":"PBO:0067765"}


id: PBO:0039156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 3","termid":"PBO:0039156"}


id: GO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type IV protein (DNA-protein) secretor activity (obsolete GO:0015449)","synonyms":[{"name":"type IV protein (DNA-protein) secretor activity","type":"exact"}],"termid":"GO:0015449"}


id: GO:0016628
data:
  {"annotated_genes":["SJAG_03024","SJAG_02007","SJAG_02151","SJAG_00174","SJAG_01362","SJAG_01786","SJAG_04810","SJAG_04652","SJAG_03236","SJAG_02717","SJAG_04107","SJAG_01041","SJAG_03240","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97752,97753],"is_not":false,"summary":null,"term":"GO:0016628"},{"annotations":[100625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050613"},{"annotations":[88728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000246"},{"annotations":[96909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[91187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"},{"annotations":[60879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102389"},{"annotations":[93977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043115"},{"annotations":[110974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008977"},{"annotations":[110975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004665"},{"annotations":[107502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019166"},{"annotations":[105827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[105828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[100863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[114546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[114547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[85668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_01362":null,"SJAG_01786":null,"SJAG_02007":null,"SJAG_02151":null,"SJAG_02717":null,"SJAG_03024":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_04107":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9661726","Reactome:R-HSA-9661745","EC:1.3.1.-","Reactome:R-HSA-4419979","Reactome:R-HSA-4755572"],"termid":"GO:0016628","terms_by_termid":{"GO:0000246":null,"GO:0004318":null,"GO:0004665":null,"GO:0008977":null,"GO:0016628":null,"GO:0019166":null,"GO:0043115":null,"GO:0050613":null,"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0102389":null,"GO:0141148":null}}


id: GO:0050521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + alpha-glucan + H2O = AMP + phospho-alpha-glucan + phosphate.","definition_xrefs":["EC:2.7.9.4","MetaCyc:2.7.9.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"alpha-glucan, water dikinase activity","secondary_identifiers":["RHEA:11668"],"synonyms":[{"name":"ATP:alpha-glucan, water phosphotransferase activity","type":"related"},{"name":"GWD","type":"related"},{"name":"a-glucan, water dikinase activity","type":"exact"},{"name":"alpha-glucan,water dikinase activity","type":"related"},{"name":"starch-related R1 protein activity","type":"related"}],"termid":"GO:0050521"}


id: GO:0160168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=9 symmetry. The T=9 capsid is composed of 12 pentameric and 80 hexameric capsomeres.","definition_xrefs":["PMID:37138077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=9 icosahedral viral capsid","secondary_identifiers":["VZ:5316"],"termid":"GO:0160168"}


id: PBO:0108540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 1B","termid":"PBO:0108540"}


id: GO:1902565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil activation.","definition_xrefs":["GOC:TermGenie","PMID:17588661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of neutrophil activation","termid":"GO:1902563"},{"relation_name":"positively_regulates","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil activation","synonyms":[{"name":"activation of neutrophil activation","type":"narrow"},{"name":"up regulation of neutrophil activation","type":"exact"},{"name":"up-regulation of neutrophil activation","type":"exact"},{"name":"upregulation of neutrophil activation","type":"exact"}],"termid":"GO:1902565"}


id: PBO:0058880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10396b","termid":"PBO:0058880"}


id: FYPO:0005257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular proline level","synonyms":[{"name":"decreased cellular L-proline level","type":"exact"},{"name":"decreased cellular proline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular proline level during vegetative growth","type":"exact"},{"name":"decreased level of proline in cell","type":"exact"},{"name":"reduced cellular proline level","type":"exact"},{"name":"reduced level of proline in cell","type":"exact"}],"termid":"FYPO:0005257"}


id: SO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000106 non_capped_primary_transcript (obsolete SO:0000106)","termid":"SO:0000106"}


id: GO:0046410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + isochorismate = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate + pyruvate + CO2.","definition_xrefs":["EC:2.5.1.64","PMID:1459959"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity (obsolete GO:0046410)","synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","type":"exact"}],"termid":"GO:0046410"}


id: PBO:0089776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein Cfh2","termid":"PBO:0089776"}


id: PBO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-8 (pseudogene)","termid":"PBO:0051356"}


id: PR:Q9UTP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.05","synonyms":[{"name":"Spom972h-rpl3002","type":"exact"}],"termid":"PR:Q9UTP0"}


id: FYPO:0005395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"normal protein phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005395"}


id: PBO:0071220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 61","termid":"PBO:0071220"}


id: PBO:0059904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 27","termid":"PBO:0059904"}


id: GO:2000821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of grooming behavior.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"grooming behavior","termid":"GO:0007625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of grooming behavior","synonyms":[{"name":"regulation of grooming behaviour","type":"exact"}],"termid":"GO:2000821"}


id: GO:0047536
data:
  {"annotated_genes":["SJAG_04678","SJAG_03312","SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71578,94526,95550],"is_not":false,"summary":null,"term":"GO:0047536"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-2-aminoadipate = 2-oxoadipate + L-glutamate.","definition_xrefs":["EC:2.6.1.39","RHEA:12601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03312":null,"SJAG_04678":null,"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"2-aminoadipate transaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-508561","MetaCyc:2-AMINOADIPATE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R01939","Reactome:R-HSA-70952"],"synonyms":[{"name":"2-aminoadipate aminotransferase activity","type":"exact"},{"name":"2-aminoadipic aminotransferase activity","type":"related"},{"name":"L-2-aminoadipate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"alpha-aminoadipate aminotransferase activity","type":"related"},{"name":"glutamate-alpha-ketoadipate transaminase activity","type":"related"},{"name":"glutamic-ketoadipic transaminase activity","type":"related"}],"termid":"GO:0047536","terms_by_termid":{"GO:0047536":null}}


id: PBO:0034355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increases_expression_of","termid":"PBO:0034355"}


id: FYPO:0006875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is abnormal.","definition_xrefs":["PomBase:mah","PMID:17895368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"abnormal protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell end during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006875"}


id: GO:0034412
data:
  {"annotated_genes":["SJAG_04771","SJAG_04483","SJAG_04666","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105489],"is_not":false,"summary":null,"term":"GO:0034412"},{"annotations":[90640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[88604,83750],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0030437","GO:0005975","GO:0008150","GO:0007049","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-glucan formation","type":"exact"},{"name":"ascospore wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0034412","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: GO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature B cell during an immune response, resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell activation involved in immune response","synonyms":[{"name":"B cell activation during immune response","type":"related"},{"name":"B lymphocyte activation during immune response","type":"related"},{"name":"B-cell activation during immune response","type":"related"},{"name":"B-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002312"}


id: GO:0019229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction","termid":"GO:0019229"}


id: GO:0033048
data:
  {"annotated_genes":["SJAG_01082","SJAG_00883","SJAG_04999","SJAG_01679","SJAG_03353","SJAG_02336","SJAG_04126","SJAG_02451","SJAG_00460","SJAG_03681","SJAG_04259","SJAG_04699","SJAG_04884","SJAG_01330","SJAG_02169","SJAG_01837","SJAG_03126","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86924,108140,95750,100069,110441,112064,109966,104435,103408],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[97965,109970,86926,112837,102486,110672,95599,111712,106096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[102487,111713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90377],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112841],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90378],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sister chromatid segregation","termid":"GO:0033046"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"negatively_regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033048","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: GO:0099107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of an ion channel via direct interaction with it as part of G protein-coupled receptor signaling.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ion channel regulator activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"ion channel regulator activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099107"}


id: PBO:0063216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 1","termid":"PBO:0063216"}


id: FYPO:0002234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular sterol ester level","synonyms":[{"name":"decreased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"decreased level of sterol ester in cell","type":"exact"},{"name":"decreased sterol ester accumulation","type":"related"},{"name":"reduced cellular sterol ester level","type":"exact"},{"name":"reduced level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002234"}


id: GO:0031267
data:
  {"annotated_genes":["SJAG_01358","SJAG_00968","SJAG_04733","SJAG_01789","SJAG_01943","SJAG_00525","SJAG_01909","SJAG_03959","SJAG_03470","SJAG_00279","SJAG_02661","SJAG_03662","SJAG_04400","SJAG_04366","SJAG_02833","SJAG_02998","SJAG_03229","SJAG_03002","SJAG_03693","SJAG_04703","SJAG_00864","SJAG_02012","SJAG_03085"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57099,58365,58844,60005,60606,60640,61015,62454,63222,63803,63844,64032,65681,66636,67743,67792,70346,70960,72554,72964,74001,76691,77057],"is_not":false,"summary":null,"term":"GO:0031267"}]},"cv_name":"molecular_function","definition":"Binding to a small monomeric GTPase.","definition_xrefs":["PMID:27218782","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase binding","termid":"GO:0051020"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00525":null,"SJAG_00864":null,"SJAG_00968":null,"SJAG_01358":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01943":null,"SJAG_02012":null,"SJAG_02661":null,"SJAG_02833":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03085":null,"SJAG_03229":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04703":null,"SJAG_04733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"small GTPase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0008536","GO:0017048","GO:0034989","GO:0017160","GO:0005084","GO:0017137","GO:0030306","GO:0017016","GO:0048365","GO:0017049","GO:0017031"],"synonyms":[{"name":"ADP-ribosylation factor binding","type":"narrow"},{"name":"ARF binding","type":"narrow"},{"name":"GTP-Ral binding","type":"narrow"},{"name":"GTP-Rho binding","type":"narrow"},{"name":"REP","type":"narrow"},{"name":"Rab GTPase binding","type":"narrow"},{"name":"Rab escort protein activity","type":"narrow"},{"name":"Rab interactor activity","type":"narrow"},{"name":"Rac GTPase binding","type":"narrow"},{"name":"Ral GTPase binding","type":"narrow"},{"name":"Ran GTPase binding","type":"narrow"},{"name":"Ran protein binding","type":"narrow"},{"name":"Ran-binding protein","type":"narrow"},{"name":"Ras GTPase binding","type":"narrow"},{"name":"Ras interactor activity","type":"narrow"},{"name":"Rho GTPase binding","type":"narrow"}],"termid":"GO:0031267","terms_by_termid":{"GO:0031267":null}}


id: PBO:0042574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like pseudogene 3","termid":"PBO:0042574"}


id: GO:1905803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GOC:TermGenie","PMID:23721876","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"negatively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to manganese ion","synonyms":[{"name":"down regulation of cellular response to manganese","type":"exact"},{"name":"down regulation of cellular response to manganese ion","type":"exact"},{"name":"down-regulation of cellular response to manganese","type":"exact"},{"name":"down-regulation of cellular response to manganese ion","type":"exact"},{"name":"downregulation of cellular response to manganese","type":"exact"},{"name":"downregulation of cellular response to manganese ion","type":"exact"},{"name":"inhibition of cellular response to manganese","type":"narrow"},{"name":"inhibition of cellular response to manganese ion","type":"narrow"},{"name":"negative regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905803"}


id: GO:1901182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of camalexin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of phytoalexin biosynthetic process","termid":"GO:0052319"},{"relation_name":"regulates","term_name":"camalexin biosynthetic process","termid":"GO:0010120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"regulation of camalexin biosynthetic process","synonyms":[{"name":"regulation of camalexin anabolism","type":"exact"},{"name":"regulation of camalexin biosynthesis","type":"exact"},{"name":"regulation of camalexin formation","type":"exact"},{"name":"regulation of camalexin synthesis","type":"exact"}],"termid":"GO:1901182"}


id: PBO:0066173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 6","termid":"PBO:0066173"}


id: PATO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000812 odor acuity value (obsolete PATO:0000812)","termid":"PATO:0000812"}


id: PBO:0068341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113A","termid":"PBO:0068341"}


id: PBO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains MCB","termid":"PBO:0001192"}


id: PR:Q9HGP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bdf2 gene.","definition_xrefs":["UniProtKB:Q9HGP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain-containing protein C631.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC631.02","synonyms":[{"name":"Spom972h-bdf2","type":"exact"}],"termid":"PR:Q9HGP4"}


id: GO:0071005
data:
  {"annotated_genes":["SJAG_03430"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101799],"is_not":false,"summary":null,"term":"GO:0071005"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.","definition_xrefs":["PMID:18322460","GOC:krc","PMID:19239890","GOC:mah","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"precatalytic spliceosome","termid":"GO:0071011"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03430":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"U2-type precatalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG precatalytic spliceosome","type":"narrow"},{"name":"major precatalytic spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex B","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex B1","type":"narrow"},{"name":"yeast U12-type spliceosomal complex A2-1","type":"related"}],"termid":"GO:0071005","terms_by_termid":{"GO:0071005":null}}


id: PBO:0075657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, non-erythrocytic 1","termid":"PBO:0075657"}


id: GO:0140625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the opioid growth factor (OGF, met-enkephalin) and transmitting the signal across the nuclear membrane. Met-enkephalin is an endogenous opioid peptide that binds to opioid and opioid growth factor receptors, regulating tissue growth in a variety of cellular processes.","definition_xrefs":["PMID:11890982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"opioid growth factor receptor activity","synonyms":[{"name":"met-enkephalin receptor activity","type":"related"},{"name":"metenkefalin receptor activity","type":"related"},{"name":"methionine enkephalin receptor activity","type":"exact"}],"termid":"GO:0140625"}


id: PBO:0050063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLF transcription factor, PAR bZIP family member","termid":"PBO:0050063"}


id: PBO:0047685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 2","termid":"PBO:0047685"}


id: PBO:0050768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family H (Hsp110) member 1","termid":"PBO:0050768"}


id: PBO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EvC ciliary complex subunit 1","termid":"PBO:0046721"}


id: GO:0007614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-term memory","secondary_identifiers":["Wikipedia:Short-term_memory"],"termid":"GO:0007614"}


id: PBO:0027239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_streptothricin","termid":"PBO:0027239"}


id: PBO:0055126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2545","termid":"PBO:0055126"}


id: FYPO:0002695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}


id: GO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine/pyrimidine nucleoside diphosphate reduction (obsolete GO:0006162)","synonyms":[{"name":"purine/pyrimidine nucleoside diphosphate reduction","type":"exact"}],"termid":"GO:0006162"}


id: RO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"mutualistically_interacts_with","termid":"RO:0002442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pollinated_by","termid":"RO:0002456"}


id: PR:O74905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl902 gene.","definition_xrefs":["UniProtKB:O74905","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.06","synonyms":[{"name":"Spom972h-rpl902","type":"exact"}],"termid":"PR:O74905"}


id: PBO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 13","termid":"PBO:0070989"}


id: PBO:0067824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 126","termid":"PBO:0067824"}


id: PATO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized","synonyms":[{"name":"focal","type":"exact"},{"name":"localised","type":"exact"}],"termid":"PATO:0000627"}


id: GO:0051493
data:
  {"annotated_genes":["SJAG_03655","SJAG_04703","SJAG_00424","SJAG_02592","SJAG_01805","SJAG_00279","SJAG_02366","SJAG_01943","SJAG_03086","SJAG_01894","SJAG_02700","SJAG_00610","SJAG_00521","SJAG_00845","SJAG_05000","SJAG_03936","SJAG_04464","SJAG_00514","SJAG_03048","SJAG_04666","SJAG_04982","SJAG_02684","SJAG_01320","SJAG_01821","SJAG_03486","SJAG_03631","SJAG_00082","SJAG_01774","SJAG_03455","SJAG_02045","SJAG_03581","SJAG_04597","SJAG_02392","SJAG_04776","SJAG_01993","SJAG_02332","SJAG_04522","SJAG_04479","SJAG_00244","SJAG_04100","SJAG_04312","SJAG_02566"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88508,84488,88693,114764,95066,110492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[87073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[98539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[98017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[90589,86207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[83767,90590,109547,106708,90757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[107613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[112652,99018,85942,92037,95611,106293,88889,85648,90594,111478,90031,88605,102856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032956"},{"annotations":[103794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[86035,97919,98912,86880,101331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[111214,111479,99880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070507"},{"annotations":[87572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[115502,89995,90555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[107197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[111215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[86080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"},{"annotations":[110495,93903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00279":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_00845":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03655":null,"SJAG_03936":null,"SJAG_04100":null,"SJAG_04312":null,"SJAG_04464":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04776":null,"SJAG_04982":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of cytoskeleton organisation","type":"exact"},{"name":"regulation of cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0051493","terms_by_termid":{"GO:0030833":null,"GO:0031110":null,"GO:0031117":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0042989":null,"GO:0051016":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:0120306":null,"GO:1901673":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: PBO:0059559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1C, pseudogene","termid":"PBO:0059559"}


id: PBO:0074878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58C","termid":"PBO:0074878"}


id: FYPO:0001278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal MCM complex assembly","synonyms":[{"name":"normal MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"normal MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001278"}


id: PBO:0090003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: GO:1904418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["GOC:TermGenie","PMID:22579284","GOC:nc","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"regulation of telomeric loop formation","synonyms":[{"name":"regulation of t-loop biosynthesis","type":"exact"},{"name":"regulation of t-loop formation","type":"exact"}],"termid":"GO:1904418"}


id: GO:1990021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of axon of a CA3 pyramidal neuron that projects to hippocampal area CA1.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon collateral","termid":"GO:0044303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer axon collateral","synonyms":[{"name":"Schaffer collateral","type":"broad"}],"termid":"GO:1990021"}


id: GO:0042246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed tissues.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue regeneration","termid":"GO:0042246"}


id: GO:0035691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by macrophage migration inhibitory factor binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling","PMID:12782713","PMID:19413900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"MIF signaling pathway","type":"exact"},{"name":"macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0035691"}


id: FYPO:0001197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular calcium level","synonyms":[{"name":"decreased calcium accumulation","type":"related"},{"name":"decreased cellular calcium ion level","type":"exact"},{"name":"decreased cellular calcium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level","type":"exact"}],"termid":"FYPO:0001197"}


id: PBO:0069362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 622, pseudogene","termid":"PBO:0069362"}


id: PBO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 6","termid":"PBO:0060484"}


id: FYPO:0005723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}


id: PBO:0074156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E4","termid":"PBO:0074156"}


id: PBO:0110975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase, implicated in energy generation","termid":"PBO:0110975"}


id: MOD:01321
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:11510821","Unimod:176#C","PubMed:9448752","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01321"}


id: PBO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-28","termid":"PBO:0051345"}


id: PBO:0003019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0003019"}


id: GO:0062095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an endoplasmic reticulum membrane to a peroxisome via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:28463579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome localization","termid":"GO:0060151"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0140056","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum-peroxisome tethering","termid":"GO:0062095"}


id: GO:1905067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in heart development.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:bc","PMID:25034767","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in heart development (obsolete GO:1905067)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in heart development","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in heart development","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in heart development","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:1905067"}


id: GO:0072301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"}


id: PBO:0062547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily L member 1 pseudogene","termid":"PBO:0062547"}


id: GO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin production","termid":"GO:0002638"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"negative regulation of isotype switching","synonyms":[{"name":"down regulation of isotype switching","type":"exact"},{"name":"down-regulation of isotype switching","type":"exact"},{"name":"downregulation of isotype switching","type":"exact"},{"name":"inhibition of isotype switching","type":"narrow"},{"name":"negative regulation of class switch recombination","type":"exact"},{"name":"negative regulation of class switching","type":"exact"},{"name":"negative regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045829"}


id: PBO:0044335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 18","termid":"PBO:0044335"}


id: GO:0080106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-methylthiopropyl-glucosinolate = 7-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"7-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080106"}


id: FYECO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed carbonyl cyanide m-chlorophenyl hydrazone","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CCCP","secondary_identifiers":["PMID:37540145"],"synonyms":[{"name":"An experimental condition in which carbonyl cyanide m-chlorophenyl hydrazone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","type":"exact"}],"termid":"FYECO:0000435"}


id: PBO:0049851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hdc homolog, cell cycle regulator","termid":"PBO:0049851"}


id: FYPO:0005750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Zeocin (phleomycin D1). Cells stop growing (and may die) at a concentration of Zeocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to Zeocin","synonyms":[{"name":"hypersensitive to Zeocin","type":"exact"},{"name":"sensitive to Zeocin during mitotic cell cycle","type":"related"},{"name":"sensitive to Zeocin during vegetative growth","type":"exact"},{"name":"sensitive to phleomycin D1","type":"exact"}],"termid":"FYPO:0005750"}


id: PBO:0030882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_vegetative_growth","termid":"PBO:0030882"}


id: GO:1900821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orlandin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"orlandin metabolic process","termid":"GO:1900819"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orlandin biosynthetic process","synonyms":[{"name":"orlandin anabolism","type":"exact"},{"name":"orlandin biosynthesis","type":"exact"},{"name":"orlandin formation","type":"exact"},{"name":"orlandin synthesis","type":"exact"}],"termid":"GO:1900821"}


id: PBO:0050617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 8","termid":"PBO:0050617"}


id: GO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood vessel endothelial cell migration","termid":"GO:0043536"},{"relation_name":"is_a","term_name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"},{"relation_name":"positively_regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090050"}


id: PBO:0082512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the ER membrane GPI transamidase complex; involved in adding glycosylphosphatidylinositol (GPI) anchors to newly synthesized proteins; luminally-oriented type I integral membrane glycoprotein of the ER; human PIGK protein is a functional homolog","termid":"PBO:0082512"}


id: PBO:0067997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 299","termid":"PBO:0067997"}


id: GO:0005684
data:
  {"annotated_genes":["SJAG_03547","SJAG_03430","SJAG_01214","SJAG_00859","SJAG_02227","SJAG_00058","SJAG_00094","SJAG_02078","SJAG_00809","SJAG_00363","SJAG_00504","SJAG_00911","SJAG_05349","SJAG_03112","SJAG_03983","SJAG_03995","SJAG_05240","SJAG_04117","SJAG_04214","SJAG_00597","SJAG_03993","SJAG_02560","SJAG_04163","SJAG_01504","SJAG_01810","SJAG_00147","SJAG_00225","SJAG_04783","SJAG_03210","SJAG_02279","SJAG_01654","SJAG_00498","SJAG_01008","SJAG_02558","SJAG_00076","SJAG_03966","SJAG_04898","SJAG_00414","SJAG_03301","SJAG_01452","SJAG_02185","SJAG_01315","SJAG_00577","SJAG_00322","SJAG_01301","SJAG_05025","SJAG_00249","SJAG_02455","SJAG_01152","SJAG_01870","SJAG_05009","SJAG_02844","SJAG_03427","SJAG_00206","SJAG_04318","SJAG_00474","SJAG_02722","SJAG_00602","SJAG_03469","SJAG_04911","SJAG_02304","SJAG_16453"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84012,84746,86161,91979,92342,93852,96852,98814,99192,99198,99370,100652,100682,101020,101811,103342,107459,110046,111149,114104,115011],"is_not":false,"summary":null,"term":"GO:0005684"},{"annotations":[97408,109455,102029,91348,114837,87740,99381,106839,94009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[91573,96851,113361,93017,101939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[93018,102569,102718,113362,104947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[86396,105049,85206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[110530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[101799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[99384,108548,84745,108836,104948,102570,110035,91786,89224,97908,112569,103114,101685,106831,98715,89553,91100,94012,97411,91515,102039,105693,106813,109459,114840,102934,106239,111410,87744,92507,106841,91357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron that has canonical consensus sequences near the 5' and 3' ends.","definition_xrefs":["PMID:11343900","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01152":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01315":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"U2-type spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG spliceosome","type":"narrow"},{"name":"major (U2-type) spliceosomal complex","type":"exact"},{"name":"major spliceosomal complex","type":"exact"}],"termid":"GO:0005684","terms_by_termid":{"GO:0000243":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071021":null}}


id: GO:0046860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a glycosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane","termid":"GO:0005778"},{"relation_name":"part_of","term_name":"glycosome","termid":"GO:0020015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glycosome membrane","termid":"GO:0046860"}


id: PBO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha 4","termid":"PBO:0048559"}


id: PBO:0067465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 592, pseudogene","termid":"PBO:0067465"}


id: PBO:0005410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex RNA helicase Ski2 (predicted)","termid":"PBO:0005410"}


id: PR:Q9UTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- etd1 gene.","definition_xrefs":["UniProtKB:Q9UTR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein etd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.08","synonyms":[{"name":"Spom972h-etd1","type":"exact"}],"termid":"PR:Q9UTR4"}


id: PBO:0081795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 725, pseudogene","termid":"PBO:0081795"}


id: GO:0055074
data:
  {"annotated_genes":["SJAG_04028","SJAG_01435","SJAG_04892","SJAG_03850","SJAG_01400","SJAG_03879","SJAG_04167","SJAG_03793","SJAG_04096","SJAG_02019","SJAG_04698","SJAG_03866","SJAG_04757","SJAG_02532","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86901,87385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[111250,91637,97179,109545,110108,114699,91868,94290,104848,92984,111719,94504,97798,108525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within an organism or cell.","definition_xrefs":["GOC:ceb","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01400":null,"SJAG_01435":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04167":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_04892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"calcium ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion concentration","type":"exact"}],"termid":"GO:0055074","terms_by_termid":{"GO:0006874":null,"GO:0032468":null}}


id: SO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of characterized repeat sequences.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000187 repeat_family (obsolete SO:0000187)","termid":"SO:0000187"}


id: PBO:0088204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn2-Cys6 zinc-finger transcription factor; activates genes involved in multidrug resistance; paralog of Yrm1p, acting on an overlapping set of target genes; YRR1 has a paralog, PDR8, that arose from the whole genome duplication","termid":"PBO:0088204"}


id: GO:0018578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxybenzoate + O2 = 3-carboxy-cis,cis-muconate.","definition_xrefs":["EC:1.13.11.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"protocatechuate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:PROTOCATECHUATE-34-DIOXYGENASE-RXN","RHEA:10084","UM-BBD_reactionID:r0143"],"synonyms":[{"name":"protocatechuate oxygenase activity","type":"broad"},{"name":"protocatechuate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"protocatechuic 3,4-dioxygenase activity","type":"related"},{"name":"protocatechuic 3,4-oxygenase activity","type":"related"},{"name":"protocatechuic acid oxidase activity","type":"related"}],"termid":"GO:0018578"}


id: PATO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000219 healing (obsolete PATO:0000219)","termid":"PATO:0000219"}


id: PBO:0082537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth","termid":"PBO:0082537"}


id: PBO:0108552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 associated factor 1 Laf1","termid":"PBO:0108552"}


id: PBO:0068184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 491","termid":"PBO:0068184"}


id: PBO:0029500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell","termid":"PBO:0029500"}


id: PBO:0080147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 3","termid":"PBO:0080147"}


id: GO:0019360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotide from other compounds, including niacinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide metabolic process","termid":"GO:0006769"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process from niacinamide","synonyms":[{"name":"nicotinamide nucleotide anabolism from niacinamide","type":"exact"},{"name":"nicotinamide nucleotide formation from niacinamide","type":"exact"},{"name":"nicotinamide nucleotide synthesis from niacinamide","type":"exact"}],"termid":"GO:0019360"}


id: FYPO:0006306
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115328],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115643,115500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115253],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115688],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115345,115656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115329],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an actin filament-based process, i.e. any process that depends upon or alters the actin cytoskeleton, is abnormal.","definition_xrefs":["PomBase:mah","GO:0030029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild 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pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_02392","SJAG_04522","SJAG_03596","SJAG_01143"],"name":"abnormal actin filament-based process","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_04703","SJAG_01143","SJAG_04280","SJAG_04522","SJAG_03596","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta","rga4delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","for3delta"],"synonyms":[{"name":"abnormal actin filament-based process during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament-based process during vegetative growth","type":"exact"},{"name":"abnormal microfilament-based process","type":"related"}],"termid":"FYPO:0006306","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0052362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 11","termid":"PBO:0052362"}


id: PBO:0084699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glutamyl-tRNA synthetase; predicted to be palmitoylated","termid":"PBO:0084699"}


id: GO:0102177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylenelophenol + O2 + NADH + H+ = 4alpha-hydroxymethyl-ergosta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["RHEA:58872","GOC:pz","PMID:11707264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"24-methylenelophenol methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11930","EC:1.14.18.11"],"termid":"GO:0102177"}


id: PBO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (predicted)","termid":"PBO:0003194"}


id: SO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short hairpin RNA (shRNA) is an RNA transcript that makes a tight hairpin turn that can be used to silence target gene expression via RNA interference.","definition_xrefs":["PMID:6699500","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA","secondary_identifiers":["http:http\\:en.wikipedia.org/wiki/Small_hairpin_RNA"],"synonyms":[{"name":"short hairpin RNA","type":"exact"},{"name":"small hairpin RNA","type":"exact"}],"termid":"SO:0002031"}


id: GO:0043552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043552)","synonyms":[{"name":"activation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"positive regulation of phosphoinositide 3-kinase activity","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase activity","type":"exact"}],"termid":"GO:0043552"}


id: FYPO:0006598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of threonine at position 3 of histone H3 is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-T3 phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone H3 phosphorylation at T3 during vegetative growth","type":"exact"},{"name":"decreased histone H3-T3 phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-pT3 during vegetative growth","type":"related"},{"name":"decreased histone H3T3 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-T3 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006598"}


id: PBO:0078345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 11-1","termid":"PBO:0078345"}


id: PR:Q86ZU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox1102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q86ZU7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rsm22-cox11 tandem protein 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.13","synonyms":[{"name":"Spom972h-cox1102","type":"exact"}],"termid":"PR:Q86ZU7"}


id: PBO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma","termid":"PBO:0001228"}


id: PBO:0028081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_specific_nuclear_polyadenylated_mRNA_level_during_vegetative_growth","termid":"PBO:0028081"}


id: PBO:0062847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocrin","termid":"PBO:0062847"}


id: PBO:0046875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3D antisense RNA 1","termid":"PBO:0046875"}


id: GO:0070057
data:
  {"annotated_genes":["SJAG_04080","SJAG_03536","SJAG_00405"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99092,101453,114657],"is_not":false,"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane to which the spindle pole body (SPB) is anchored; the prospore membrane extends from the SPB attachment site to surround the spore nucleus.","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005628"}],"interesting_parent_ids":["GO:0005575","GO:0005628"],"is_obsolete":false,"name":"prospore membrane spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane SPB attachment site","type":"exact"},{"name":"forespore membrane spindle pole body attachment site","type":"exact"},{"name":"prospore membrane SPB attachment site","type":"exact"}],"termid":"GO:0070057","terms_by_termid":{"GO:0070057":null}}


id: PBO:0089646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GEF Ste6","termid":"PBO:0089646"}


id: PBO:0067680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 865, pseudogene","termid":"PBO:0067680"}


id: PR:Q10146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp6 gene.","definition_xrefs":["UniProtKB:Q10146","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease rrp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.01","synonyms":[{"name":"Spom972h-rrp6","type":"exact"},{"name":"ribosomal RNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10146"}


id: GO:0160028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of pyroptosis.","definition_xrefs":["PMID:34637033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"negatively_regulates","term_name":"pyroptosis","termid":"GO:0070269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyroptosis","termid":"GO:0160028"}


id: FYPO:0003401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to osmotic stress (obsolete FYPO:0003401)","synonyms":[{"name":"elongated cell during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"elongated in response to osmotic stress","type":"exact"}],"termid":"FYPO:0003401"}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["PMID:12213832","PMID:14754902","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0023052","GO:0044085"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: PR:P78794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein CWC15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12718:SF2","PRO:DNx","OMA:SCHPO02687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.06c","secondary_identifiers":["UniProtKB:P78794"],"synonyms":[{"name":"Spom972h-CWC15","type":"exact"},{"name":"complexed with cdc5 protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78794"}


id: PBO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 2 Y-linked","termid":"PBO:0044033"}


id: PBO:0003071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related protein Mfr1","termid":"PBO:0003071"}


id: GO:1901167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chlorocatechol.","definition_xrefs":["UniPathway:UPA00083","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol metabolic process","synonyms":[{"name":"3-chlorocatechol metabolism","type":"exact"}],"termid":"GO:1901167"}


id: PBO:0078283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 16-1","termid":"PBO:0078283"}


id: PBO:0005790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex Epl1","termid":"PBO:0005790"}


id: PBO:0062350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily M member 1","termid":"PBO:0062350"}


id: PBO:0084065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Rho3p and Rho4p; involved in repolarization of actin cytoskeleton during adaptation to heat shock stress; phosphorylated by Pkc1p","termid":"PBO:0084065"}


id: PBO:0041871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium sensing receptor","termid":"PBO:0041871"}


id: GO:2000651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"positive regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000651"}


id: PBO:0064363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMF1-BGLAP readthrough","termid":"PBO:0064363"}


id: PBO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 3","termid":"PBO:0072706"}


id: PBO:0046733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ewing sarcoma associated transcript 1","termid":"PBO:0046733"}


id: PBO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-4","termid":"PBO:0052848"}


id: GO:0016636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.3.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016636"}


id: PBO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl aminopeptidase Aap1","termid":"PBO:0002711"}


id: PBO:0030370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0030370"}


id: GO:0001651
data:
  {"annotated_genes":["SJAG_00259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85040],"is_not":false,"summary":null,"term":"GO:0001651"}]},"cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005730","GO:0005634"],"is_obsolete":false,"name":"dense fibrillar component","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1841764412"],"synonyms":[{"name":"pars fibrosa","type":"broad"}],"termid":"GO:0001651","terms_by_termid":{"GO:0001651":null}}


id: GO:0022886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables transport of a solute across a membrane. This kind of transporter interacts much more weakly with the solute than the carrier does. It is an aqueous pore that extends across the membrane. It may change from closed to open and back. It transports faster than a carrier. It is always passive.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"channel-forming ionophore activity","synonyms":[{"name":"ionophore activity","type":"broad"}],"termid":"GO:0022886"}


id: GO:1900965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanophenazine metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanophenazine metabolic process","termid":"GO:1900629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanophenazine metabolic process","synonyms":[{"name":"regulation of methanophenazine metabolism","type":"exact"}],"termid":"GO:1900965"}


id: PBO:0072642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of telomere elongation helicase 1","termid":"PBO:0072642"}


id: PBO:0067565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 718, pseudogene","termid":"PBO:0067565"}


id: PBO:0028296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0028296"}


id: GO:2000432
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"negatively_regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"negative regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000432","terms_by_termid":{"GO:1903500":null}}


id: PBO:0049749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit zeta","termid":"PBO:0049749"}


id: PBO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 Tsr402","termid":"PBO:0090376"}


id: PBO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44 (predicted)","termid":"PBO:0000658"}


id: PBO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 2","termid":"PBO:0001877"}


id: PBO:0013742
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_note","termid":"PBO:0013742"}


id: PBO:0059110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOS proto-oncogene, serine/threonine kinase","termid":"PBO:0059110"}


id: PBO:0052528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein 1","termid":"PBO:0052528"}


id: PBO:0041313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 68","termid":"PBO:0041313"}


id: PBO:0058911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12129","termid":"PBO:0058911"}


id: PBO:0004174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductin Ero1a","termid":"PBO:0004174"}


id: PBO:0050642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 7, pseudogene","termid":"PBO:0050642"}


id: PBO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0030846"}


id: PBO:0069867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1154, pseudogene","termid":"PBO:0069867"}


id: PBO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 30","termid":"PBO:0046588"}


id: PBO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal family","termid":"PBO:0000088"}


id: PBO:0081523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 432","termid":"PBO:0081523"}


id: GO:0003050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the signaling molecule atrial natriuretic peptide.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial natriuretic peptide","synonyms":[{"name":"blood pressure regulation by ANP","type":"related"},{"name":"blood pressure regulation by atrial natriuretic peptide","type":"exact"}],"termid":"GO:0003050"}


id: GO:0090716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.","definition_xrefs":["PMID:26831526","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune memory response","termid":"GO:0090716"}


id: CHEBI:17015
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin","termid":"CHEBI:17015"}


id: GO:1902719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining copper ions in an extracellular area such that they are separated from other components of a biological system.","definition_xrefs":["PMID:3099306","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular sequestering of copper ion (obsolete GO:1902719)","synonyms":[{"name":"extracellular sequestering of copper ion","type":"exact"}],"termid":"GO:1902719"}


id: PR:Q9USI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15184401","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.05c","secondary_identifiers":["PR:000027729","UniProtKB:Q9USI6"],"synonyms":[{"name":"SPCC645.05C","type":"related"},{"name":"Spom972h-myo2","type":"exact"}],"termid":"PR:Q9USI6"}


id: GO:0048098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the antennal joint over time, from its formation to the mature structure. The antennal joint is the joint between antennal segments.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"antennal development","termid":"GO:0007469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint development","termid":"GO:0048098"}


id: PBO:0079008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 2-1","termid":"PBO:0079008"}


id: PBO:0004811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase Alg5 (predicted)","termid":"PBO:0004811"}


id: GO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism positively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of acid-sensing ion channel in another organism","termid":"GO:0044737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acid-sensing ion channel in another organism","synonyms":[{"name":"positive regulation of ASIC channel in other organism","type":"exact"},{"name":"positive regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044739"}


id: PBO:0061303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase puromycin sensitive","termid":"PBO:0061303"}


id: PR:O60164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pescadillo that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03820","PRO:DNx","PANTHER:PTHR12221:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.05c","secondary_identifiers":["UniProtKB:O60164"],"synonyms":[{"name":"Spom972h-PES1","type":"exact"},{"name":"nucleolar protein 7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60164"}


id: PBO:0005301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and CVT pathway serine/threonine protein kinase Atg1","termid":"PBO:0005301"}


id: PBO:0064562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 and ZP3 fusion","termid":"PBO:0064562"}


id: GO:1903268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GO_REF:0000058","PMID:12679340","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"positively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of ornithine catabolic process","synonyms":[{"name":"activation of ornithine breakdown","type":"narrow"},{"name":"activation of ornithine catabolic process","type":"narrow"},{"name":"activation of ornithine catabolism","type":"narrow"},{"name":"activation of ornithine degradation","type":"narrow"},{"name":"positive regulation of ornithine breakdown","type":"exact"},{"name":"positive regulation of ornithine catabolism","type":"exact"},{"name":"positive regulation of ornithine degradation","type":"exact"},{"name":"up regulation of ornithine breakdown","type":"exact"},{"name":"up regulation of ornithine catabolic process","type":"exact"},{"name":"up regulation of ornithine catabolism","type":"exact"},{"name":"up regulation of ornithine degradation","type":"exact"},{"name":"up-regulation of ornithine breakdown","type":"exact"},{"name":"up-regulation of ornithine catabolic process","type":"exact"},{"name":"up-regulation of ornithine catabolism","type":"exact"},{"name":"up-regulation of ornithine degradation","type":"exact"},{"name":"upregulation of ornithine breakdown","type":"exact"},{"name":"upregulation of ornithine catabolic process","type":"exact"},{"name":"upregulation of ornithine catabolism","type":"exact"},{"name":"upregulation of ornithine degradation","type":"exact"}],"termid":"GO:1903268"}


id: PBO:0059007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocyte to macrophage differentiation associated","termid":"PBO:0059007"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: GO:0110115
data:
  {"annotated_genes":["SJAG_03602","SJAG_04280","SJAG_01456","SJAG_04486"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94604,95161,99658,112165],"is_not":false,"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A megadalton-sized complex at the medial cortex organized as an oligomeric core of SAD family protein kinases involved in cell size-dependent localization and phosphorylation of Wee1 during interphase.","definition_xrefs":["PMID:29514920","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"},{"relation_name":"part_of","term_name":"medial cortical node","termid":"GO:0071341"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01456":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"Cdr2 medial cortical node complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"interphase cortical node","type":"exact"},{"name":"interphase node","type":"exact"}],"termid":"GO:0110115","terms_by_termid":{"GO:0110115":null}}


id: PBO:0077781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TONSL antisense RNA 1","termid":"PBO:0077781"}


id: GO:0002025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change.","definition_xrefs":["PMID:10358008","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"},{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine-mediated vasodilation involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"noradrenaline-adrenaline vasodilation involved in regulation of blood pressure","type":"exact"},{"name":"norepinephrine-epinephrine vasodilation during blood pressure regulation","type":"exact"},{"name":"vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0002025"}


id: GO:0032649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:mah","GOC:add","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type II interferon production","termid":"GO:0032609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of type II interferon production","secondary_identifiers":["GO:0045072","GO:1902713"],"synonyms":[{"name":"regulation of interferon-gamma biosynthetic process","type":"narrow"},{"name":"regulation of interferon-gamma production","type":"exact"},{"name":"regulation of interferon-gamma secretion","type":"narrow"}],"termid":"GO:0032649"}


id: GO:0006030
data:
  {"annotated_genes":["SJAG_03723","SJAG_04868","SJAG_00442","SJAG_04728","SJAG_00978","SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[87949,97678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[100832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006038"},{"annotations":[98958,84761,84423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034221"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_03013":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"beta-1,4-linked N-acetylglucosamine metabolic process","type":"exact"},{"name":"beta-1,4-linked N-acetylglucosamine metabolism","type":"exact"},{"name":"chitin metabolism","type":"exact"}],"termid":"GO:0006030","terms_by_termid":{"GO:0006038":null,"GO:0034217":null,"GO:0034221":null,"GO:0034232":null}}


id: PBO:0075743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 2","termid":"PBO:0075743"}


id: FYPO:0004248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to vacuole","termid":"FYPO:0007058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to vacuolar membrane","synonyms":[{"name":"normal protein localisation to vacuolar membrane","type":"exact"},{"name":"normal protein localization in vacuolar membrane","type":"exact"},{"name":"normal protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"normal protein localization to vacuole membrane","type":"exact"}],"termid":"FYPO:0004248"}


id: GO:0120215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"positively_regulates","term_name":"histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of histidine biosynthetic process","synonyms":[{"name":"activation of histidine anabolism","type":"narrow"},{"name":"activation of histidine biosynthesis","type":"narrow"},{"name":"activation of histidine biosynthetic process","type":"narrow"},{"name":"activation of histidine formation","type":"narrow"},{"name":"activation of histidine synthesis","type":"narrow"},{"name":"positive regulation of histidine anabolism","type":"exact"},{"name":"positive regulation of histidine biosynthesis","type":"exact"},{"name":"positive regulation of histidine formation","type":"exact"},{"name":"positive regulation of histidine synthesis","type":"exact"},{"name":"up regulation of histidine anabolism","type":"exact"},{"name":"up regulation of histidine biosynthesis","type":"exact"},{"name":"up regulation of histidine biosynthetic process","type":"exact"},{"name":"up regulation of histidine formation","type":"exact"},{"name":"up regulation of histidine synthesis","type":"exact"},{"name":"up-regulation of histidine anabolism","type":"exact"},{"name":"up-regulation of histidine biosynthesis","type":"exact"},{"name":"up-regulation of histidine biosynthetic process","type":"exact"},{"name":"up-regulation of histidine formation","type":"exact"},{"name":"up-regulation of histidine synthesis","type":"exact"},{"name":"upregulation of histidine anabolism","type":"exact"},{"name":"upregulation of histidine biosynthesis","type":"exact"},{"name":"upregulation of histidine biosynthetic process","type":"exact"},{"name":"upregulation of histidine formation","type":"exact"},{"name":"upregulation of histidine synthesis","type":"exact"}],"termid":"GO:0120215"}


id: PBO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q15)","termid":"PBO:0047883"}


id: PR:Q9HDZ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immature colon carcinoma transcript 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01301","PRO:DNx","PANTHER:PTHR11075:SF12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 82 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.11","secondary_identifiers":["UniProtKB:Q9HDZ3"],"synonyms":[{"name":"Spom972h-ICT1","type":"exact"}],"termid":"PR:Q9HDZ3"}


id: PR:000050473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:10651902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q09914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1/GTP+","pombase_gene_id":"SPAC1F7.04","synonyms":[{"name":"Spom-rho1/GTP+","type":"exact"},{"name":"rho1/GTP+","type":"exact"}],"termid":"PR:000050473"}


id: PBO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 3","termid":"PBO:0043067"}


id: PBO:0048275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 11","termid":"PBO:0048275"}


id: PBO:0077769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 5","termid":"PBO:0077769"}


id: PBO:0078485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-5","termid":"PBO:0078485"}


id: PBO:0043266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 25","termid":"PBO:0043266"}


id: PBO:0055269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2696","termid":"PBO:0055269"}


id: GO:0004952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neurotransmitter dopamine to initiate a change in cell activity.","definition_xrefs":["PMID:21711983","GOC:PARL","IUPHAR_GPCR:1282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"dopamine neurotransmitter receptor activity","termid":"GO:0004952"}


id: MOD:00063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to N-acetyl-L-valine.","definition_xrefs":["RESID:AA0054","PubMed:1735421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-valine","synonyms":[{"name":"(2S)-2-acetamido-3-methylbutanoic acid","type":"exact"},{"name":"2-acetylamino-3-methylbutanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-methylbutanoic acid","type":"exact"},{"name":"AcVal","type":"exact"},{"name":"MOD_RES N-acetylvaline","type":"exact"},{"name":"N-acetyl-L-valine","type":"exact"},{"name":"N-acetylated L-valine","type":"exact"},{"name":"N-acetylvaline","type":"exact"}],"termid":"MOD:00063"}


id: PR:P78929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A destrin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02001","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.06c","secondary_identifiers":["UniProtKB:P78929"],"synonyms":[{"name":"Spom972h-DSTN","type":"exact"},{"name":"actin-depolymerizing factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78929"}


id: PBO:0078243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 22/OR9-2 (pseudogene)","termid":"PBO:0078243"}


id: PR:P87179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity and stress response component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.01c","synonyms":[{"name":"Spom972h-wsc1","type":"exact"}],"termid":"PR:P87179"}


id: PBO:0054943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2357","termid":"PBO:0054943"}


id: PBO:0040853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 6","termid":"PBO:0040853"}


id: GO:0032778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Co2+(out) = ADP + phosphate + Co2+(in).","definition_xrefs":["GOC:mlg","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalt ion transmembrane transporter activity","termid":"GO:0015087"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"P-type cobalt transporter activity","secondary_identifiers":["RHEA:32779","MetaCyc:TRANS-RXN-459","GO:0015632"],"synonyms":[{"name":"ATP-dependent cobalt transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cobalt transmembrane transporter activity","type":"related"},{"name":"cobalt porter activity","type":"related"},{"name":"cobalt transporting ATPase activity","type":"related"},{"name":"cobalt-transporting ATPase activity","type":"related"}],"termid":"GO:0032778"}


id: GO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class II","secondary_identifiers":["GO:0042591","GO:0048005"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class II","type":"broad"},{"name":"antigen presentation, exogenous peptide antigen","type":"broad"},{"name":"antigen processing, exogenous antigen via major histocompatibility complex class II","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0019886"}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18226187","PMID:18206972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0140096","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: PBO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase Trm13 (predicted)","termid":"PBO:0001722"}


id: PBO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates eng1","termid":"PBO:0001955"}


id: PBO:0066159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 pseudogene 2","termid":"PBO:0066159"}


id: PBO:0045413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA4 pseudogene 2","termid":"PBO:0045413"}


id: PR:G2TRK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC110.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C110.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.05","synonyms":[{"name":"Spom972h-SPAC110.05","type":"exact"}],"termid":"PR:G2TRK5"}


id: GO:0007560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from an imaginal disc are generated and organized. The imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc morphogenesis","secondary_identifiers":["GO:0007452"],"synonyms":[{"name":"imaginal disc metamorphosis","type":"exact"}],"termid":"GO:0007560"}


id: PBO:0085003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of cytosolic calcium homeostasis; localizes to the plasma membrane, concentrating at the bud neck during cell division; regulated by Crz1p through a CDRE promoter element; non-essential gene; putative transporter with sequence similarity to human SLC10A7; functional homolog of C. albicans RCH1","termid":"PBO:0085003"}


id: GO:0033176
data:
  {"annotated_genes":["SJAG_05294","SJAG_02782","SJAG_01397","SJAG_02470","SJAG_01817","SJAG_04015","SJAG_01913","SJAG_00212","SJAG_01447","SJAG_04955","SJAG_01471","SJAG_02023","SJAG_00136","SJAG_00516","SJAG_03406"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96670],"is_not":false,"summary":null,"term":"GO:0033176"},{"annotations":[86368,100084,88234,86051,96096,91837],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[92791,97804,96172,98838,106058,114848,84267,95082],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across a concentration gradient. The resulting transmembrane electrochemical potential of H+ is used to drive a variety of (i) secondary active transport systems via H+-dependent symporters and antiporters and (ii) channel-mediated transport systems. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis. V-type ATPases are found in the membranes of organelles such as vacuoles, endosomes, and lysosomes, and in the plasma membrane.","definition_xrefs":["ISBN:0716743663","PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting V-type ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0033176","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0033176":null}}


id: GO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of butyrate, the anion of butyric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"},{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"butyrate catabolic process","secondary_identifiers":["GO:0043440"],"synonyms":[{"name":"butanoic acid breakdown","type":"exact"},{"name":"butanoic acid catabolic process","type":"exact"},{"name":"butanoic acid catabolism","type":"exact"},{"name":"butanoic acid degradation","type":"exact"},{"name":"butyrate breakdown","type":"exact"},{"name":"butyrate catabolism","type":"exact"},{"name":"butyrate degradation","type":"exact"}],"termid":"GO:0046359"}


id: GO:0018700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-N-isopropylacetanilide + H+ + 2 e- = Cl- + N-isopropylacetanilide.","definition_xrefs":["UM-BBD_reactionID:r0719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-chloro-N-isopropylacetanilide reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0018700"}


id: FYPO:0007606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the breakdown of DNA occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased DNA degradation during nitrogen starvation","synonyms":[{"name":"decreased DNA catabolic process during nitrogen starvation","type":"exact"},{"name":"decreased DNA catabolism during nitrogen starvation","type":"exact"},{"name":"decreased DNA degradation during nitrogen depletion","type":"exact"},{"name":"decreased DNA degradation during nitrogen deprivation","type":"exact"},{"name":"reduced DNA degradation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007606"}


id: PBO:0010081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ISCA1 orholog","termid":"PBO:0010081"}


id: GO:0052197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont defense response (obsolete GO:0052197)","synonyms":[{"name":"activation by host of symbiont defense response","type":"narrow"},{"name":"stimulation by host of symbiont defense response","type":"narrow"},{"name":"up regulation by host of symbiont defense response","type":"exact"},{"name":"up-regulation by host of symbiont defense response","type":"exact"},{"name":"upregulation by host of symbiont defense response","type":"exact"}],"termid":"GO:0052197"}


id: SO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic variable region which closely resembles a known functional T receptor variable gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the variable region of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_pseudogene","termid":"SO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_V_pseudogene","synonyms":[{"name":"T cell receptor V pseudogene","type":"exact"},{"name":"T cell receptor Variable pseudogene","type":"exact"},{"name":"TR V pseudogene","type":"exact"},{"name":"T_cell_receptor_V_pseudogene","type":"exact"},{"name":"T_cell_receptor_Variable_pseudogene","type":"exact"}],"termid":"SO:0002103"}


id: PBO:0081173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 16","termid":"PBO:0081173"}


id: GO:0033673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorylation","termid":"GO:0042326"},{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kinase activity","synonyms":[{"name":"down regulation of kinase activity","type":"exact"},{"name":"down-regulation of kinase activity","type":"exact"},{"name":"downregulation of kinase activity","type":"exact"},{"name":"inhibition of kinase activity","type":"narrow"},{"name":"kinase inhibitor","type":"narrow"}],"termid":"GO:0033673"}


id: GO:0031010
data:
  {"annotated_genes":["SJAG_04879"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008623"}]},"cv_name":"cellular_component","definition":"Any nuclear protein complex that contains an ATPase subunit of the imitation switch (ISWI) family. ISWI ATPases are involved in assembling chromatin and in sliding and spacing nucleosomes to regulate transcription of nuclear RNA polymerases I, II, and III and also DNA replication, recombination and repair.","definition_xrefs":["PMID:15020051","PMID:21810179","PMID:15284901","GOC:krc","PMID:16568949","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04879":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"ISWI-type complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031010","terms_by_termid":{"GO:0008623":null}}


id: GO:0072708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sorbitol","synonyms":[{"name":"response to glucitol","type":"exact"}],"termid":"GO:0072708"}


id: GO:0098904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrioventricular node myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of AV node cell action potential","synonyms":[{"name":"regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0098904"}


id: PATO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female fertile","termid":"PATO:0000888"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased female fertility","synonyms":[{"name":"high female fertility","type":"exact"}],"termid":"PATO:0001831"}


id: PBO:0038621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER2 pseudogene 1","termid":"PBO:0038621"}


id: PBO:0065483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 2","termid":"PBO:0065483"}


id: GO:0051193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cofactor metabolic process (obsolete GO:0051193)","synonyms":[{"name":"regulation of cofactor metabolism","type":"exact"}],"termid":"GO:0051193"}


id: PBO:0046373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 8","termid":"PBO:0046373"}


id: GO:0032159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in germ tubes and hyphae in fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cap","termid":"GO:0032159"}


id: GO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete HA1 clathrin adaptor (obsolete GO:0005907)","synonyms":[{"name":"AP1","type":"related"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0005907"}


id: PR:O13930
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rab guanine nucleotide exchange factor sec2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.10","synonyms":[{"name":"GDP-GTP exchange factor sec2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sec2","type":"exact"}],"termid":"PR:O13930"}


id: PBO:0085814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels","termid":"PBO:0085814"}


id: GO:0071221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipopeptide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"},{"relation_name":"is_a","term_name":"cellular response to bacterial lipoprotein","termid":"GO:0071220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"}


id: PBO:0004895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn3","termid":"PBO:0004895"}


id: PBO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein Svf1","termid":"PBO:0005528"}


id: PBO:0031038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Golgi_organization","termid":"PBO:0031038"}


id: PBO:0042688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CECR2 histone acetyl-lysine reader","termid":"PBO:0042688"}


id: PBO:0109222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 3","termid":"PBO:0109222"}


id: PBO:0056063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 4","termid":"PBO:0056063"}


id: PR:G2TRP6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B-like protein new16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.13","synonyms":[{"name":"Spom972h-new16","type":"exact"}],"termid":"PR:G2TRP6"}


id: GO:0099096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The giant, cup-shaped axon terminal of a vestibular afferent neuron, serving as a post-synaptic contact to a type I hair cell.","definition_xrefs":["PMID:10706428","PMID:25355208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vestibular calyx terminal","termid":"GO:0099096"}


id: FYPO:0005396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to subtelomeric heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"},{"relation_name":"is_a","term_name":"abolished protein localization to telomere during vegetative growth","termid":"FYPO:0003109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to subtelomeric heterochromatin","synonyms":[{"name":"abolished protein localisation to subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to telomeric heterochromatin","type":"related"},{"name":"protein localization to subtelomeric heterochromatin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005396"}


id: GO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl ethyl ketone + O2 = H2O + ethyl acetate.","definition_xrefs":["UM-BBD_reactionID:r0169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-butanone oxidase activity","termid":"GO:0018486"}


id: GO:0019406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"},{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"hexitol biosynthetic process","synonyms":[{"name":"hexitol anabolism","type":"exact"},{"name":"hexitol biosynthesis","type":"exact"},{"name":"hexitol formation","type":"exact"},{"name":"hexitol synthesis","type":"exact"}],"termid":"GO:0019406"}


id: PBO:0084948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL23 trans-acting MAL-activator, MAL21 maltose permease, and MAL22 maltase; on the right arm of Chromosome III, but not in strain S288C","termid":"PBO:0084948"}


id: GO:0120153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a carbohydrate in the presence of calcium.","definition_xrefs":["PMID:25912189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcium-dependent carbohydrate binding","termid":"GO:0120153"}


id: PBO:0079024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 7-1","termid":"PBO:0079024"}


id: PBO:0076646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX2 antisense RNA 1","termid":"PBO:0076646"}


id: GO:0021710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar stellate cell. Differentiation includes the processes involved in commitment of a neuroblast to a cerebellar stellate cell fate. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar molecular layer formation","termid":"GO:0021688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar stellate cell differentiation","termid":"GO:0021710"}


id: GO:0010773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0006310","GO:0065003","GO:0006281","GO:0007049","GO:0008150","GO:0044085","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in meiotic gene conversion","termid":"GO:0010773"}


id: FYPO:0000640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is abnormal at the centromere central core. Chromatin silencing is the observed effect of processes that repress transcription at the centromere central core, which is normally assembled into CENP-A-containing chromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromatin silencing at centromere central core","synonyms":[{"name":"abnormal centromere central core chromatin silencing","type":"exact"},{"name":"abnormal chromatin silencing at centromere central core during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at centromere central core during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at centromeric central core","type":"exact"},{"name":"abnormal negative regulation of transcription at centromere central core","type":"related"},{"name":"abnormal transcriptional repression at centromere central core","type":"related"}],"termid":"FYPO:0000640"}


id: GO:0050352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + trimethylamine N-oxide = dimethylamine + formaldehyde.","definition_xrefs":["RHEA:20217","EC:4.1.2.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"trimethylamine-oxide aldolase activity","secondary_identifiers":["MetaCyc:TRIMETHYLAMINE-OXIDE-ALDOLASE-RXN","UM-BBD_reactionID:r1409","KEGG_REACTION:R02512"],"synonyms":[{"name":"trimethylamine N-oxide aldolase activity","type":"related"},{"name":"trimethylamine N-oxide demethylase activity","type":"related"},{"name":"trimethylamine N-oxide formaldehyde-lyase activity","type":"related"},{"name":"trimethylamine-N-oxide formaldehyde-lyase (dimethylamine-forming)","type":"related"},{"name":"trimethylamine-N-oxide formaldehyde-lyase activity","type":"related"}],"termid":"GO:0050352"}


id: PBO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline phosphotransferase 1","termid":"PBO:0043057"}


id: PBO:0108693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Tbc13","termid":"PBO:0108693"}


id: PBO:0015679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Ecm14 (predicted)","termid":"PBO:0015679"}


id: GO:0030734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 1,4-N1-D-glucooligosaccharide = S-adenosyl-L-homocysteine + oligosaccharide containing 6-methyl-D-glucose units.","definition_xrefs":["EC:2.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"polysaccharide O-methyltransferase activity","secondary_identifiers":["MetaCyc:POLYSACCHARIDE-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:1,4-alpha-D-glucan 6-O-methyltransferase activity","type":"related"},{"name":"acylpolysacharide 6-methyltransferase activity","type":"related"},{"name":"polysaccharide methyltransferase activity","type":"related"}],"termid":"GO:0030734"}


id: PBO:0081886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 836","termid":"PBO:0081886"}


id: PBO:0005266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor Ump1 (predicted)","termid":"PBO:0005266"}


id: GO:0009189
data:
  {"annotated_genes":["SJAG_04665","SJAG_02874","SJAG_00885","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88621,91670,103437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[114154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009189","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: PBO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 92 pseudogene","termid":"PBO:0070177"}


id: PBO:0074622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 21","termid":"PBO:0074622"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_00082","SJAG_04280","SJAG_01837","SJAG_04140","SJAG_03126","SJAG_03048","SJAG_01805","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86205,108141,101343,112174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[98553,86209,89991,107382,112844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: PBO:0062259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 15 pseudogene","termid":"PBO:0062259"}


id: GO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of prophase I in meiosis, and during which the chromosomes first become visible.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"leptotene","secondary_identifiers":["Wikipedia:Leptotene","Wikipedia:Meiosis#Leptotene"],"termid":"GO:0000237"}


id: FYPO:0005813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or both ends of a microtubule is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","termid":"FYPO:0003185"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to microtubule end during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule end during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule end during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to microtubule end during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005813"}


id: PBO:0044275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 16","termid":"PBO:0044275"}


id: PBO:0045673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 light intermediate chain 1","termid":"PBO:0045673"}


id: PBO:0063092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAQR9 antisense RNA 1","termid":"PBO:0063092"}


id: PBO:0079072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 6-1","termid":"PBO:0079072"}


id: GO:0051335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the nuclear membrane during meiosis II.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane reassembly","termid":"GO:0051333"},{"relation_name":"part_of","term_name":"meiosis II","termid":"GO:0007135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0061024","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"meiosis II nuclear membrane reassembly","synonyms":[{"name":"meiosis II nuclear envelope reassembly","type":"related"}],"termid":"GO:0051335"}


id: GO:0106114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cohesin loading","termid":"GO:1905405"},{"relation_name":"regulates","term_name":"mitotic cohesin dsDNA (leading strand) loading","termid":"GO:0062021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cohesin dsDNA (leading strand) loading","termid":"GO:0106114"}


id: PBO:0065661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type K","termid":"PBO:0065661"}


id: PBO:0068102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 409","termid":"PBO:0068102"}


id: PBO:0045671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2","termid":"PBO:0045671"}


id: PR:Q9Y738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein mis12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.04c","synonyms":[{"name":"NMS complex subunit mis12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis12","type":"exact"}],"termid":"PR:Q9Y738"}


id: PBO:0011066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family helicase","termid":"PBO:0011066"}


id: GO:0018140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl cysteine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0244"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine thiazolecarboxylic acid (obsolete GO:0018140)","termid":"GO:0018140"}


id: PBO:0041153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 8","termid":"PBO:0041153"}


id: GO:0102148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acetyl-beta-D-galactosalaminyl-[glycan] = N-acetyl-beta-D-galactosamine + a glycan.","definition_xrefs":["EC:3.2.1.52","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"N-acetyl-beta-D-galactosaminidase activity","termid":"GO:0102148"}


id: PBO:0086659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; homozygous diploid deletion strain exhibits low budding index; physically interacts with Hsp82p; YPL257W is not an essential gene","termid":"PBO:0086659"}


id: GO:0048343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a paraxial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell differentiation","termid":"GO:0048342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}


id: GO:0043320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"natural killer cell activation involved in immune response","termid":"GO:0002323"},{"relation_name":"part_of","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"natural killer cell degranulation","synonyms":[{"name":"NK cell degranulation","type":"exact"},{"name":"NK cell granule exocytosis","type":"exact"},{"name":"natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043320"}


id: PBO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 18","termid":"PBO:0050316"}


id: PBO:0038855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 2","termid":"PBO:0038855"}


id: PBO:0043446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 7","termid":"PBO:0043446"}


id: PBO:0074360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5 divergent transcript","termid":"PBO:0074360"}


id: PBO:0087782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087782"}


id: PATO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's irregular surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rough","secondary_identifiers":["PATO:0001616"],"synonyms":[{"name":"coarse","type":"exact"}],"termid":"PATO:0000700"}


id: PBO:0086224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a kinesin-14 heterodimeric motor with Kar3p; localizes Kar3p at mitotic spindle poles; has a structure similar to a kinesin motor domain but lacks an ATP-binding site and is catalytically inactive; binds microtubules; required for sister chromatid cohesion; VIK1 has a paralog, CIK1, that arose from the whole genome duplication","termid":"PBO:0086224"}


id: PBO:0065919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit beta","termid":"PBO:0065919"}


id: PR:O74450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pop23 gene.","definition_xrefs":["UniProtKB:O74450","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleases P/MRP protein subunit pop3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.05","synonyms":[{"name":"RNA-processing protein pop3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pop23","type":"exact"}],"termid":"PR:O74450"}


id: PBO:0073292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 14","termid":"PBO:0073292"}


id: GO:0016188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle.","definition_xrefs":["GOC:curators","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle maturation","termid":"GO:0016188"}


id: PR:Q9P7N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12616:SF0","PRO:DNx","OMA:SCHPO00654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.05c","secondary_identifiers":["UniProtKB:Q9P7N3"],"synonyms":[{"name":"Spom972h-VPS41","type":"exact"}],"termid":"PR:Q9P7N3"}


id: GO:0033098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the amyloplast envelope; also faces the amyloplast stroma.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"amyloplast membrane","termid":"GO:0033097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast inner membrane","termid":"GO:0033098"}


id: PBO:0030974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation","termid":"PBO:0030974"}


id: GO:0015414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nitrate(out) = ADP + phosphate + nitrate(in).","definition_xrefs":["RHEA:13181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type nitrate transporter activity","secondary_identifiers":["EC:7.3.2.4","MetaCyc:3.6.3.26-RXN"],"synonyms":[{"name":"ATPase-coupled nitrate transmembrane transporter activity","type":"related"},{"name":"nitrate ABC transporter","type":"exact"},{"name":"nitrate transmembrane-transporting ATPase activity","type":"related"},{"name":"nitrate transporting ATPase activity","type":"related"},{"name":"nitrate-transporting ATPase activity","type":"related"}],"termid":"GO:0015414"}


id: GO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tryptophan 2,3-dioxygenase activity","secondary_identifiers":["GO:0004426","MetaCyc:TRYPTOPHAN-23-DIOXYGENASE-RXN","Reactome:R-HSA-198563","Reactome:R-HSA-71188","RHEA:24536","Reactome:R-HSA-888614"],"synonyms":[{"name":"L-tryptophan 2,3-dioxygenase activity","type":"related"},{"name":"L-tryptophan pyrrolase activity","type":"related"},{"name":"L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"TDO","type":"related"},{"name":"indolamine 2,3-dioxygenase activity","type":"broad"},{"name":"indoleamine-pyrrole 2,3-dioxygenase activity","type":"exact"},{"name":"tryptamin 2,3-dioxygenase activity","type":"related"},{"name":"tryptamine 2,3-dioxygenase activity","type":"related"},{"name":"tryptophan oxygenase activity","type":"broad"},{"name":"tryptophan peroxidase activity","type":"broad"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0004833"}


id: GO:0075033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont partition is formed to separate the appressorium from the germination tube, occurring during appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete appressorium septum formation (obsolete GO:0075033)","synonyms":[{"name":"septum formation during appressorium formation on or near host","type":"related"},{"name":"septum formation involved in appressorium formation","type":"exact"},{"name":"septum formation involved in appressorium formation on or near host","type":"exact"}],"termid":"GO:0075033"}


id: PBO:0080335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 99 pseudogene","termid":"PBO:0080335"}


id: FYPO:0001789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to oxidative stress","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress response","type":"exact"}],"termid":"FYPO:0001789"}


id: GO:1990357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich cytoskeletal network located beneath the microvilli of the apical plasma membrane of polarized epithelial cells. In addition to actin filaments, the terminal web may contain actin-binding proteins, myosin motor proteins, and intermediate filaments. The terminal web can function as a contractile structure that influences the spatial distribution of microvilli as well as the development and morphogenesis of tissues containing polarized epithelial cells.","definition_xrefs":["Wikipedia:Terminal_web","GOC:kmv","PMID:7511618","PMID:19437512","PMID:24677443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737","GO:0015629"],"is_obsolete":false,"name":"terminal web","termid":"GO:1990357"}


id: PR:Q9USL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18B5.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.09c","synonyms":[{"name":"Spom972h-SPCC18B5.09c","type":"exact"}],"termid":"PR:Q9USL2"}


id: GO:1904547
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98559],"is_not":false,"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to glucose starvation.","definition_xrefs":["GOC:TermGenie","PMID:21118717","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to glucose starvation","termid":"GO:0042149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904547","terms_by_termid":{"GO:1904547":null}}


id: PBO:0083335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the essential uncharacterized ORF YDR412W that is implicated in rRNA processing","termid":"PBO:0083335"}


id: PBO:0046127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 1","termid":"PBO:0046127"}


id: PBO:0078191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-1","termid":"PBO:0078191"}


id: PBO:0062799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OS9 endoplasmic reticulum lectin","termid":"PBO:0062799"}


id: FYPO:0003197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to copper ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation","termid":"FYPO:0006208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"abnormal RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during copper starvation during vegetative growth","type":"exact"},{"name":"altered cellular RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"altered transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003197"}


id: PBO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocyctinuria","termid":"PBO:0001097"}


id: GO:0019416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as an electron acceptor.","definition_xrefs":["MetaCyc:THIOSULFOX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"polythionate oxidation","termid":"GO:0019416"}


id: FYPO:0005077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to glucose starvation.","definition_xrefs":["PMID:17179073","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during glucose starvation","synonyms":[{"name":"cell morphology, elongated cell during glucose starvation","type":"exact"},{"name":"elongated cell during glucose depletion","type":"exact"},{"name":"elongated cell during glucose deprivation","type":"exact"},{"name":"long cell during glucose starvation","type":"exact"}],"termid":"FYPO:0005077"}


id: PBO:0077646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 3","termid":"PBO:0077646"}


id: PBO:0077688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF2 and NCK interacting kinase","termid":"PBO:0077688"}


id: GO:0090655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a junction formed at the point where double-stranded telomeric DNA becomes a single-stranded G-rich telomeric DNA 3' overhang.","definition_xrefs":["GOC:bhm","PMID:21852327","GOC:nc","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand/single-strand DNA junction binding","termid":"GO:0000406"},{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"double-stranded/single-stranded junction telomeric DNA binding","termid":"GO:0090655"}


id: FYECO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing galactose (typically <2% w/v), salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose MM","termid":"FYECO:0000289"}


id: PR:Q9UTI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gammaproteobacterial-type dihydroorotase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.03c","secondary_identifiers":["UniProtKB:Q9UTI0"],"synonyms":[{"name":"DHOase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gammaproteo-pyrC","type":"exact"}],"termid":"PR:Q9UTI0"}


id: PATO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001220 angle_unit (obsolete PATO:0001220)","termid":"PATO:0001220"}


id: PBO:0029605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transporter_activity","termid":"PBO:0029605"}


id: PBO:0078289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 22-1","termid":"PBO:0078289"}


id: PBO:0108943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 22","termid":"PBO:0108943"}


id: GO:0031741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type B gastrin/cholecystokinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystokinin receptor binding","termid":"GO:0031739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type B gastrin/cholecystokinin receptor binding","synonyms":[{"name":"type B gastrin/cholecystokinin receptor ligand","type":"narrow"}],"termid":"GO:0031741"}


id: FYPO:0003349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PomBase:mah","GO:0000092","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during anaphase B during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0003349"}


id: PBO:0042657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 6","termid":"PBO:0042657"}


id: GO:0140903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 26) = S-adenosyl-L-homocysteine + (histone H3)-N-methyl-arginine (position 26). This reaction is the addition of a methyl group to the arginine residue at position 26 of histone H3.","definition_xrefs":["PMID:17882261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0008276","GO:0003674","GO:0016741","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3R26 methyltransferase activity","synonyms":[{"name":"histone H3R26 arginine methyltransferase activity","type":"exact"},{"name":"histone methylase activity (H3-R26 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-R26 specific)","type":"exact"},{"name":"histone-H3R26 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H3-R26 specific)","type":"exact"}],"termid":"GO:0140903"}


id: PBO:0110288
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named after human ortholog CAPRIN-1","termid":"PBO:0110288"}


id: PR:O42972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.02c gene.","definition_xrefs":["UniProtKB:O42972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0588 membrane protein C20F10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.02c","synonyms":[{"name":"Spom972h-SPBC20F10.02c","type":"exact"}],"termid":"PR:O42972"}


id: SO:0002171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomeric D-loop is a three-stranded DNA displacement loop that forms at the site where the telomeric 3' single-stranded DNA overhang (formed of the repeat sequence TTAGGG in mammals) is tucked back inside the double-stranded component of telomeric DNA molecule, thus forming a t-loop or telomeric-loop and protecting the chromosome terminus.","definition_xrefs":["PMID:24012755","PMID:15071557","PMID:10338204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_D_loop","synonyms":[{"name":"telomeric D loop","type":"exact"}],"termid":"SO:0002171"}


id: PBO:0044282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 5","termid":"PBO:0044282"}


id: GO:0019420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reduction of sulfate to hydrogen sulfide, which acts as a terminal electron acceptor. Sulfate is activated to adenosine-phosphosulfate (APS) which is then reduced to sulfite, which is in turn reduced to hydrogen sulfide.","definition_xrefs":["PMID:25400653","PMID:26680199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"},{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dissimilatory sulfate reduction","secondary_identifiers":["MetaCyc:DISSULFRED-PWY","Wikipedia:Sulfate-reducing_microorganism"],"synonyms":[{"name":"dissimilatory sulphate reduction","type":"exact"}],"termid":"GO:0019420"}


id: GO:0160016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an unstable tRNA + 2 ATP + 4 CTP = a tRNA with a 3' CCACCA end + 6 diphosphate.","definition_xrefs":["PMID:22076379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCA tRNA nucleotidyltransferase activity","termid":"GO:0004810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"CCACCA tRNA nucleotidyltransferase activity","termid":"GO:0160016"}


id: PR:P40231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cka1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.11","synonyms":[{"name":"CK II subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23C11.11","type":"related"},{"name":"Spom972h-cka1","type":"exact"},{"name":"orb5","type":"related"}],"termid":"PR:P40231"}


id: GO:2000898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucomannan catabolic process","synonyms":[{"name":"regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000898"}


id: PBO:0085535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6A has a paralog, RPS6B, that arose from the whole genome duplication","termid":"PBO:0085535"}


id: GO:1903209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:20969476"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxidative stress-induced cell death (obsolete GO:1903209)","synonyms":[{"name":"activation of cell death in response to oxidative stress","type":"narrow"},{"name":"enhancement of oxidative stress-induced cell death","type":"narrow"},{"name":"positive regulation of cell death in response to oxidative stress","type":"exact"},{"name":"up regulation of cell death in response to oxidative stress","type":"exact"},{"name":"up-regulation of cell death in response to oxidative stress","type":"exact"},{"name":"upregulation of cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903209"}


id: PBO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med15 (predicted)","termid":"PBO:0003421"}


id: FYPO:0003671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ATP binding","termid":"FYPO:0003671"}


id: GO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075207)","synonyms":[{"name":"negative regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075207"}


id: GO:1901727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:TermGenie","PMID:20497126","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylase activity (obsolete GO:1901727)","synonyms":[{"name":"activation of histone deacetylase activity","type":"narrow"},{"name":"up regulation of histone deacetylase activity","type":"exact"},{"name":"up-regulation of histone deacetylase activity","type":"exact"},{"name":"upregulation of histone deacetylase activity","type":"exact"}],"termid":"GO:1901727"}


id: GO:0020014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell division by multiple fission in which nuclei and other organelles in the parent cell divide repeatedly and move to the cell periphery before internal membranes develop around them, producing a large number of daughter cells simultaneously.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"schizogony","secondary_identifiers":["Wikipedia:Protozoal_merogony"],"termid":"GO:0020014"}


id: GO:1901147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephric nephron morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"},{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}


id: PBO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein Pxa1","termid":"PBO:0001011"}


id: GO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate determination","synonyms":[{"name":"intermediate mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048394"}


id: PBO:0046692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine kinase 1","termid":"PBO:0046692"}


id: _global:part_of_structure_that_is_capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"this relation holds between c and p when c is part of some c', and c' is capable of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of_structure_that_is_capable_of","secondary_identifiers":["RO:0002329"],"termid":"_global:part_of_structure_that_is_capable_of"}


id: GO:0034586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"21U-RNA metabolic process","termid":"GO:0034585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA catabolic process","synonyms":[{"name":"21U-RNA breakdown","type":"exact"},{"name":"21U-RNA catabolism","type":"exact"},{"name":"21U-RNA degradation","type":"exact"}],"termid":"GO:0034586"}


id: PBO:0087464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of an alternative replication factor C complex; important for DNA replication and genome integrity; suppresses spontaneous DNA damage; involved in homologous recombination-mediated repair and telomere homeostasis; required for PCNA (Pol30p) unloading during DNA replication","termid":"PBO:0087464"}


id: GO:0097025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex formed by the association of MMP7, DLG1 and either LIN7A or LIN7C; regulates the stability and localization of DLG1 to cell junctions.","definition_xrefs":["PMID:17237226","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"MPP7-DLG1-LIN7 complex","termid":"GO:0097025"}


id: PBO:0072994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCML2 pseudogene 1","termid":"PBO:0072994"}


id: PBO:0054514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1914","termid":"PBO:0054514"}


id: PBO:0087308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small heat shock protein (sHSP) with chaperone activity; forms barrel-shaped oligomers that suppress unfolded protein aggregation; involved in cytoskeleton reorganization after heat shock; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0087308"}


id: GO:1900308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heptasaccharide transport","termid":"GO:1900296"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"positively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltoheptaose transport","synonyms":[{"name":"activation of maltoheptaose transport","type":"narrow"},{"name":"up regulation of maltoheptaose transport","type":"exact"},{"name":"up-regulation of maltoheptaose transport","type":"exact"},{"name":"upregulation of maltoheptaose transport","type":"exact"}],"termid":"GO:1900308"}


id: GO:0008423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of bleomycin B2 (a cytotoxic glycometallopeptide) by hydrolysis of a peptide bond of beta-aminoalanine, but also shows general aminopeptidase activity. The specificity varies somewhat with source, but amino acid arylamides of Met, Leu and Ala are preferred.","definition_xrefs":["EC:3.4.22.40"],"gene_count":0,"genotype_count":0,"name":"obsolete bleomycin hydrolase activity (obsolete GO:0008423)","synonyms":[{"name":"aminopeptidase C (Lactococcus lactis)","type":"narrow"},{"name":"bleomycin hydrolase activity","type":"exact"}],"termid":"GO:0008423"}


id: GO:0004446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate.","definition_xrefs":["EC:3.1.3.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"inositol-hexakisphosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-7920"],"synonyms":[{"name":"1D-myo-inositol-hexakisphosphate 5-phosphohydrolase activity","type":"narrow"},{"name":"MIPP activity","type":"broad"},{"name":"inositol tetrakisphosphate phosphomonoesterase activity","type":"related"},{"name":"multiple inositol-polyphosphate phosphatase activity","type":"broad"}],"termid":"GO:0004446"}


id: PBO:0050640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 5, pseudogene","termid":"PBO:0050640"}


id: PBO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0036163"}


id: PBO:0041234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 68","termid":"PBO:0041234"}


id: PBO:0069574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 847, pseudogene","termid":"PBO:0069574"}


id: FYPO:0006110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the silent mating-type cassettes are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:28404620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased silent mating-type cassette transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of siRNAs homologous to silent mating-type cassette","type":"related"},{"name":"increased accumulation of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased level of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased mating-type region heterochromatin transcript-derived siRNA level","type":"exact"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"increased silent mating-type region transcript-derived siRNA level","type":"exact"}],"termid":"FYPO:0006110"}


id: PBO:0039912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 10 like","termid":"PBO:0039912"}


id: PR:O14068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0357 protein C1687.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.07","synonyms":[{"name":"Spom972h-SPAC1687.07","type":"exact"}],"termid":"PR:O14068"}


id: GO:1903004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:22970133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"}


id: PBO:0047902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q36)","termid":"PBO:0047902"}


id: PBO:0087532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nucleotide Excision Repair Factor 1 (NEF1); recognizes and binds damaged DNA during nucleotide excision repair (NER); also involved in regulation of transcription; contains zinc finger motif; homolog of human XPA protein","termid":"PBO:0087532"}


id: GO:1900952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"positive regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900955"},{"relation_name":"positively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900952"}


id: PBO:0046000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX antisense RNA 1","termid":"PBO:0046000"}


id: MOD:01091
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-phenylalanine residue with one chlorine atom.","definition_xrefs":["DeltaMass:233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated L-phenylalanine","synonyms":[{"name":"Cl1Phe","type":"exact"}],"termid":"MOD:01091"}


id: GO:0045866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of recombination within rDNA repeats (obsolete GO:0045866)","synonyms":[{"name":"positive regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045866"}


id: GO:1902193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0006629","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) catabolic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) breakdown","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) catabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902193"}


id: PBO:0074863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49A","termid":"PBO:0074863"}


id: PBO:0072654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8A","termid":"PBO:0072654"}


id: PBO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human INT6","termid":"PBO:0003394"}


id: PBO:0068555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 6, pseudogene","termid":"PBO:0068555"}


id: PBO:0082938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic class E vacuolar protein sorting (VPS) factor; coordinates protein sorting and deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes","termid":"PBO:0082938"}


id: PBO:0084819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084819"}


id: GO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.","definition_xrefs":["PMID:12865422","PMID:11743021","PMID:10589671"],"gene_count":0,"genotype_count":0,"name":"obsolete Sin3 complex (obsolete GO:0016580)","termid":"GO:0016580"}


id: PBO:0075250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 2","termid":"PBO:0075250"}


id: GO:0045965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid metabolic process","termid":"GO:0007553"},{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ecdysteroid metabolic process","synonyms":[{"name":"down regulation of ecdysteroid metabolic process","type":"exact"},{"name":"down-regulation of ecdysteroid metabolic process","type":"exact"},{"name":"downregulation of ecdysteroid metabolic process","type":"exact"},{"name":"inhibition of ecdysteroid metabolic process","type":"narrow"},{"name":"negative regulation of ecdysteroid metabolism","type":"exact"}],"termid":"GO:0045965"}


id: PBO:0033794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_ion_starvation-induced_proteins","termid":"PBO:0033794"}


id: GO:1900214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["GOC:TermGenie","GOC:mtg_kidney_jan10","GOC:yaf","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900214"}


id: PBO:0027657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027657"}


id: PBO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 1","termid":"PBO:0046153"}


id: GO:0015649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 2-keto-3-deoxygluconate(out) + H+(out) = 2-keto-3-deoxygluconate(in) + H+(in).","definition_xrefs":["RHEA:29943","TC:2.A.10.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"2-keto-3-deoxygluconate:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-113"],"synonyms":[{"name":"2-keto-3-deoxygluconate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015649"}


id: PBO:0084427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major orotate phosphoribosyltransferase (OPRTase) isozyme; catalyzes the fifth enzymatic step in de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate; URA5 has a paralog, URA10, that arose from the whole genome duplication","termid":"PBO:0084427"}


id: GO:0000959
data:
  {"annotated_genes":["SJAG_04885","SJAG_00865","SJAG_00797","SJAG_04094","SJAG_00077","SJAG_01797","SJAG_00653","SJAG_04367","SJAG_03289","SJAG_03332","SJAG_00358","SJAG_01948","SJAG_02526","SJAG_01704","SJAG_00428","SJAG_02991","SJAG_02428","SJAG_04840","SJAG_06586","SJAG_00997","SJAG_02977","SJAG_02288","SJAG_04700","SJAG_01352","SJAG_02302","SJAG_03104","SJAG_00255","SJAG_04113","SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97513],"is_not":false,"summary":null,"term":"GO:0000959"},{"annotations":[89904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[103393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[114180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[93188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[92425,106793,86166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[106085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[95122,110601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[110070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[110071,86587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000957"},{"annotations":[99784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000963"},{"annotations":[90841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[83647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006390"},{"annotations":[79241,114053,106086,83971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[97544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[110415,114742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[90443,113116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[88983,104658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[93473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[93847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"},{"annotations":[83649,91315],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006391"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving RNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00428":null,"SJAG_00653":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01352":null,"SJAG_01704":null,"SJAG_01797":null,"SJAG_01948":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02428":null,"SJAG_02526":null,"SJAG_02977":null,"SJAG_02991":null,"SJAG_03014":null,"SJAG_03104":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_04094":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04840":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000959","terms_by_termid":{"GO:0000957":null,"GO:0000959":null,"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0006390":null,"GO:0006391":null,"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:1990180":null,"GO:1990799":null}}


id: PBO:0073568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonic hedgehog signaling molecule","termid":"PBO:0073568"}


id: GO:0047822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + hypotaurine + NADPH + O2 = H2O + NADP+ + taurine.","definition_xrefs":["RHEA:69819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hypotaurine dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-1655453","MetaCyc:HYPOTAURINE-DEHYDROGENASE-RXN","EC:1.14.13.8"],"termid":"GO:0047822"}


id: PATO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobility","termid":"PATO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immobile","synonyms":[{"name":"fixed","type":"related"}],"termid":"PATO:0000300"}


id: GO:0045884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of survival gene product expression (obsolete GO:0045884)","synonyms":[{"name":"regulation of survival gene product activity","type":"broad"},{"name":"regulation of survival gene product expression","type":"exact"},{"name":"regulation of survival gene products","type":"broad"}],"termid":"GO:0045884"}


id: PBO:0044259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR pseudogene 1","termid":"PBO:0044259"}


id: PBO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Ucp14","termid":"PBO:0001923"}


id: PBO:0046130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H","termid":"PBO:0046130"}


id: GO:1904959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["GO_REF:0000059","PMID:26734017","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"},{"relation_name":"is_a","term_name":"regulation of electron transfer activity","termid":"GO:1904732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of cytochrome-c oxidase activity","synonyms":[{"name":"regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"regulation of cytochrome a3 activity","type":"narrow"},{"name":"regulation of cytochrome aa3 activity","type":"narrow"},{"name":"regulation of cytochrome c oxidase activity","type":"exact"},{"name":"regulation of cytochrome oxidase activity","type":"related"},{"name":"regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"regulation of indophenol oxidase","type":"narrow"},{"name":"regulation of indophenolase","type":"narrow"},{"name":"regulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1904959"}


id: GO:0008235
data:
  {"annotated_genes":["SJAG_01088","SJAG_03744","SJAG_03586","SJAG_04858","SJAG_00969","SJAG_03009","SJAG_04103","SJAG_01896","SJAG_00181","SJAG_02033","SJAG_06636","SJAG_00451","SJAG_03022","SJAG_01542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110384,112365],"is_not":false,"summary":null,"term":"GO:0008235"},{"annotations":[84478,84729,110623,101925,99465,106230,89575,94020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"},{"annotations":[73207,90646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[92922,98430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00451":null,"SJAG_00969":null,"SJAG_01088":null,"SJAG_01542":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03586":null,"SJAG_03744":null,"SJAG_04103":null,"SJAG_04858":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003824","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"metalloexopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008235","terms_by_termid":{"GO:0004181":null,"GO:0008235":null,"GO:0070006":null,"GO:0070573":null}}


id: PBO:0063171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 divergent transcript","termid":"PBO:0063171"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: PBO:0077060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 7A","termid":"PBO:0077060"}


id: FYPO:0000510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear fusion during mating","synonyms":[{"name":"abnormal karyogamy","type":"exact"},{"name":"abnormal karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal nuclear fusion during conjugation","type":"exact"},{"name":"nuclear fusion during mating: abnormal","type":"related"}],"termid":"FYPO:0000510"}


id: PBO:0042860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 90","termid":"PBO:0042860"}


id: PBO:0072139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 16","termid":"PBO:0072139"}


id: GO:0005275
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amines, including polyamines, from one side of a membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005279"],"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"broad"},{"name":"amine/polyamine transmembrane transporter activity","type":"exact"},{"name":"amino acid-polyamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0005275","terms_by_termid":{"GO:0015200":null}}


id: PBO:0083970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucokinase; catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism; one of three glucose phosphorylating enzymes; expression regulated by non-fermentable carbon sources; GLK1 has a paralog, EMI2, that arose from the whole genome duplication","termid":"PBO:0083970"}


id: GO:0030139
data:
  {"annotated_genes":["SJAG_02805","SJAG_00677","SJAG_02833","SJAG_01189","SJAG_00104","SJAG_00800","SJAG_01167","SJAG_03146","SJAG_03504"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90005,103734,106873,106973,111620],"is_not":false,"summary":null,"term":"GO:0030139"},{"annotations":[92439,107770,104512,107829],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.","definition_xrefs":["PMID:19696797","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00677":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01189":null,"SJAG_02805":null,"SJAG_02833":null,"SJAG_03146":null,"SJAG_03504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"endocytic vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1362520468"],"synonyms":[{"name":"endocytotic transport vesicle","type":"exact"},{"name":"endocytotic vesicle","type":"exact"}],"termid":"GO:0030139","terms_by_termid":{"GO:0030122":null,"GO:0030139":null}}


id: GO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Long, dynamic tubular channels, formed by invagination of the nuclear envelope, that extend deep into the nucleoplasm. The channels have an underlying lamina and are implicated in functioning in signaling and transport.","definition_xrefs":["PMID:9024685","PMID:17959832","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleoplasmic reticulum","synonyms":[{"name":"nuclear channels","type":"exact"}],"termid":"GO:0044195"}


id: PBO:0066563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 2","termid":"PBO:0066563"}


id: PBO:0052456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 7","termid":"PBO:0052456"}


id: GO:1990343
data:
  {"annotated_genes":["SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115423],"is_not":false,"summary":null,"term":"GO:1990343"}]},"cv_name":"cellular_component","definition":"A region of heterochromatin that is formed dynamically under specific growth conditions by a process that requires RNAi, and is enriched in histone H3 methylated on lysine 9 (H3K9me).","definition_xrefs":["PMID:23151475","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"heterochromatin domain","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"HOOD","type":"exact"}],"termid":"GO:1990343","terms_by_termid":{"GO:1990343":null}}


id: PBO:0033767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_pole_body_duplication","termid":"PBO:0033767"}


id: PBO:0082541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein; YDR134C has a paralog, CCW12, that arose from the whole genome duplication; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 67, which in other strains encodes glutamine","termid":"PBO:0082541"}


id: PBO:0082749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; RSC functions in transcriptional regulation and elongation, chromosome stability, and establishing sister chromatid cohesion; involved in telomere maintenance","termid":"PBO:0082749"}


