# terms

id: GO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemoglobin biosynthetic process","synonyms":[{"name":"activation of hemoglobin biosynthetic process","type":"narrow"},{"name":"positive regulation of haemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"positive regulation of hemoglobin anabolism","type":"exact"},{"name":"positive regulation of hemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of hemoglobin formation","type":"exact"},{"name":"positive regulation of hemoglobin synthesis","type":"exact"},{"name":"stimulation of hemoglobin biosynthetic process","type":"narrow"},{"name":"up regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"up-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"upregulation of hemoglobin biosynthetic process","type":"exact"}],"termid":"GO:0046985"}


id: GO:0021822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intracellular signaling pathway that results in the cessation of cell movement involved in lamination of the cerebral cortex.","definition_xrefs":["GO_REF:0000021","PMID:12626695","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"negatively_regulates","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"},{"relation_name":"part_of","term_name":"layer formation in cerebral cortex","termid":"GO:0021819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell motility involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"down regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"down-regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"downregulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"exact"},{"name":"inhibition of cell locomotion involved in cerebral cortex glial-mediated radial cell migration","type":"narrow"},{"name":"negative regulation of cell locomotion involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"negative regulation of cell locomotion involved in cerebral cortex radial glia guided migration","type":"related"}],"termid":"GO:0021822"}


id: GO:0140736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of lovastin.","definition_xrefs":["PMID:19781329","PMID:10334994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"positively_regulates","term_name":"lovastatin biosynthetic process","termid":"GO:0140735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"positive regulation of lovastatin biosynthetic process","synonyms":[{"name":"positive regulation of mevacor biosynthetic process","type":"exact"},{"name":"positive regulation of mevinolin biosynthetic process","type":"exact"},{"name":"positive regulation of monacolin K biosynthetic process","type":"exact"}],"termid":"GO:0140736"}


id: GO:0070479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the nuclear-transcribed mRNA transcript body of an mRNA in which an amino-acid codon has changed to a nonsense codon; occurs when the 5' end is not protected by a 5'-cap; degradation proceeds in the 5' to 3' direction.","definition_xrefs":["PMID:18554525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, 5'-3' exonucleolytic nonsense-mediated decay","synonyms":[{"name":"5'-3' NMD","type":"exact"},{"name":"5'-3' nonsense-mediated decay","type":"exact"},{"name":"5'-3' nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear-transcribed mRNA breakdown, 5'-3' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolism, 5'-3' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA degradation, 5'-3' exonucleolytic nonsense-mediated decay","type":"exact"}],"termid":"GO:0070479"}


id: GO:0010790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which sister chromatids of a replicated chromosome are joined along the entire length of the chromosome during meiosis II.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic sister chromatid cohesion involved in meiosis II","termid":"GO:0010790"}


id: PBO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within","termid":"PBO:0017479"}


id: GO:1904260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23940118","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix assembly","termid":"GO:1901202"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"negatively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"down regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"down-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"downregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"inhibition of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"}],"termid":"GO:1904260"}


id: PBO:0027446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_antisense_RNA_transcription_at_stress_response_genes","termid":"PBO:0027446"}


id: PBO:0065621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 1","termid":"PBO:0065621"}


id: GO:0010644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication by electrical coupling","termid":"GO:0010644"}


id: PBO:0056838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member C","termid":"PBO:0056838"}


id: GO:0090628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a plant epidermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant epidermal cell fate specification","termid":"GO:0090628"}


id: PBO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 13","termid":"PBO:0050727"}


id: PBO:0049946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HID1 antisense RNA 1","termid":"PBO:0049946"}


id: SO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Large Retrotransposon Derivative elements are long-terminal repeats that contain reverse transcriptase priming sites and are conserved in sequence but contain no open reading frames encoding typical retrotransposon proteins . The LARDs identified in barley and other Triticeae have LTRs ~5.5 kb and an interal domain of ~3.5 kb. LARDs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:15082561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARD","synonyms":[{"name":"Large Retrotransposon Derivative","type":"exact"},{"name":"large_retrotransposon_derivative","type":"exact"}],"termid":"SO:0002260"}


id: GO:1901464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"down regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down regulation of tetrapyrrole formation","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down-regulation of tetrapyrrole formation","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"downregulation of tetrapyrrole formation","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"inhibition of tetrapyrrole formation","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole formation","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901464"}


id: PBO:0086216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to the Rap1p C-terminus; acts synergistically with Rif1p to help control telomere length and establish telomeric silencing; deletion results in telomere elongation; RIF2 has a paralog, ORC4, that arose from the whole genome duplication","termid":"PBO:0086216"}


id: PBO:0087790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; catalyzes sumoylation of Yku70p/80p and Sir4p promoting telomere anchoring to the nuclear envelope and regulating telomerase activity; DNA-bound form catalyzes a DNA-damaged triggered sumoylation wave resulting in multisite modification of several DNA repair proteins, enhancing interactions between these proteins and accelerating repair; sumoylates Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; role in telomere length maintenance","termid":"PBO:0087790"}


id: GO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}


id: PBO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimer","termid":"PBO:0000391"}


id: PBO:0051713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin induced gene 1","termid":"PBO:0051713"}


id: GO:0019359
data:
  {"annotated_genes":["SJAG_01359","SJAG_00957","SJAG_02889","SJAG_03946","SJAG_02618","SJAG_04693","SJAG_03298","SJAG_01566","SJAG_01500","SJAG_01582"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87264,86855,95507,109275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[113443,96225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[85234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[88101,93650,92636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nicotinamide nucleotide anabolism","type":"exact"},{"name":"nicotinamide nucleotide biosynthesis","type":"exact"},{"name":"nicotinamide nucleotide formation","type":"exact"},{"name":"nicotinamide nucleotide synthesis","type":"exact"}],"termid":"GO:0019359","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: GO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 3-diphospho-1D-myo-inositol 1,2,4,5,6-pentakisphosphate + phosphate + 2 H+.","definition_xrefs":["PMID:11502751","PMID:10827188","RHEA:56312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity","secondary_identifiers":["MetaCyc:RXN-10976"],"termid":"GO:0052848"}


id: FYPO:0004080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"increased histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"increased histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3S10 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004080"}


id: GO:0071263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation, as a result of deprivation of nourishment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to starvation","termid":"GO:0071262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to starvation","synonyms":[{"name":"down regulation of translation initiation in response to starvation","type":"exact"},{"name":"down-regulation of translation initiation in response to starvation","type":"exact"},{"name":"downregulation of translation initiation in response to starvation","type":"exact"},{"name":"inhibition of translation initiation in response to starvation","type":"narrow"},{"name":"negative regulation of translational initiation in response to nutrient starvation","type":"exact"}],"termid":"GO:0071263"}


id: PBO:0066330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN family member 3","termid":"PBO:0066330"}


id: GO:0050770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axonogenesis","termid":"GO:0050770"}


id: FYPO:0000712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"delayed onset of mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"delayed onset of nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0000712"}


id: FYPO:0009109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal after short incubation in hydroxyurea.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"},{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0005447","FYPO:0002057","FYPO:0002683","FYPO:0002058","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"decreased vegetative cell population growth after short incubation in hydroxyurea","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"decreased vegetative cell population growth after acute hydroxyurea treatment","type":"exact"}],"termid":"FYPO:0009109"}


id: GO:0071338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hair follicle cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hair follicle cell proliferation","termid":"GO:0071336"},{"relation_name":"positively_regulates","term_name":"hair follicle cell proliferation","termid":"GO:0071335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair follicle cell proliferation","synonyms":[{"name":"activation of hair follicle cell proliferation","type":"narrow"},{"name":"stimulation of hair follicle cell proliferation","type":"narrow"},{"name":"up regulation of hair follicle cell proliferation","type":"exact"},{"name":"up-regulation of hair follicle cell proliferation","type":"exact"},{"name":"upregulation of hair follicle cell proliferation","type":"exact"}],"termid":"GO:0071338"}


id: PBO:0041658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 3","termid":"PBO:0041658"}


id: PBO:0076522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 33","termid":"PBO:0076522"}


id: GO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cadherin, a type I membrane protein involved in cell adhesion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cadherin binding","termid":"GO:0045296"}


id: SO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that has either intra-genome or intracellular mobility.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile"],"termid":"SO:0001234"}


id: PBO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 protein","termid":"PBO:0001525"}


id: FYPO:0005253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tamoxifen than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to tamoxifen","synonyms":[{"name":"resistance to tamoxifen during mitotic cell cycle","type":"related"},{"name":"resistance to tamoxifen during vegetative growth","type":"exact"},{"name":"resistant to tamoxifen","type":"exact"}],"termid":"FYPO:0005253"}


id: GO:0098919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic density","termid":"GO:0098919"}


id: GO:0033381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the protease granzyme B to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protease localization to T cell secretory granule","termid":"GO:0033378"},{"relation_name":"part_of","term_name":"granzyme B localization to T cell secretory granule","termid":"GO:0033380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"establishment of granzyme B localization to T cell secretory granule","synonyms":[{"name":"T-lymphocyte secretory granule storage of granzyme B","type":"related"},{"name":"establishment of granzyme B localisation in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-cell secretory granule","type":"exact"},{"name":"establishment of granzyme B localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033381"}


id: PBO:0039305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK and LTK ligand 2","termid":"PBO:0039305"}


id: PR:000050524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DASH complex subunit dam1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-143 of the amino acid sequence represented by UniProtKB:Q9HDZ6. Example: UniProtKB:Q9HDZ6, Ser-143, MOD:00046.","definition_xrefs":["PMID:22375062","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DASH complex subunit dam1 (Schizosaccharomyces pombe)","termid":"PR:000050523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dam1/Phos(S143)","pombase_gene_id":"SPAC589.08c","synonyms":[{"name":"Spom-dam1/Phos:1","type":"exact"},{"name":"UniProtKB:Q9HDZ6, Ser-143, MOD:00046","type":"narrow"},{"name":"dam1/Phos(S143)","type":"exact"}],"termid":"PR:000050524"}


id: GO:0004532
data:
  {"annotated_genes":["SJAG_04587","SJAG_02275","SJAG_03132","SJAG_01798","SJAG_02540","SJAG_03745","SJAG_00966","SJAG_04407","SJAG_04519","SJAG_04084","SJAG_06586","SJAG_00401","SJAG_04824","SJAG_03276","SJAG_01836","SJAG_01822","SJAG_04006","SJAG_03876","SJAG_00841","SJAG_04818","SJAG_02993","SJAG_01431","SJAG_00081","SJAG_04369","SJAG_04153","SJAG_16455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88439,95785,97205,103644],"is_not":false,"summary":null,"term":"GO:0004532"},{"annotations":[111488,103641,88438,107432,103966,91811,112771,99852,86187,111816,114428,98256,100576,99118,95111,101434,104673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[86828,86521,91138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[110602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[89591,111821,112772,103967,109103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[89912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of an RNA molecule.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01431":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0140098","GO:0003824","GO:0004527"],"is_obsolete":false,"name":"RNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429961"],"synonyms":[{"name":"exoribonuclease activity","type":"exact"}],"termid":"GO:0004532","terms_by_termid":{"GO:0000175":null,"GO:0004532":null,"GO:0004534":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: GO:0100047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates inositol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100047)","termid":"GO:0100047"}


id: PBO:0073290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 12","termid":"PBO:0073290"}


id: PBO:0072987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem cell inhibitory RNA transcript","termid":"PBO:0072987"}


id: GO:1904065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled acetylcholine receptor signaling pathway that is involved in positive regulation of acetylcholine secretion, neurotransmission.","definition_xrefs":["PMID:22588719","GO_REF:0000060","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"part_of","term_name":"positive regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in upregulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in upregulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in upregulation of acetylcholine secretion","type":"exact"}],"termid":"GO:1904065"}


id: PBO:0077094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1A interacting lncRNA, retroperitoneal liposarcoma associated","termid":"PBO:0077094"}


id: PBO:0071339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 3","termid":"PBO:0071339"}


id: PBO:0048439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 2","termid":"PBO:0048439"}


id: PBO:0042441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 1","termid":"PBO:0042441"}


id: GO:0015853
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"}]},"cv_name":"biological_process","definition":"The directed movement of adenine, 6-aminopurine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"adenine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine transmembrane transport","type":"exact"}],"termid":"GO:0015853","terms_by_termid":{"GO:0098702":null}}


id: FYPO:0002286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to osmotic stress","termid":"FYPO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to osmotic stress","synonyms":[{"name":"decreased RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"decreased transcript level during cellular response to osmotic stress","type":"exact"},{"name":"reduced RNA level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002286"}


id: SO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeating trinucleotide sequence (three bases).","direct_ancestors":[{"relation_name":"is_a","term_name":"microsatellite","termid":"SO:0000289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide_repeat_microsatellite_feature","synonyms":[{"name":"dinucleotide repeat microsatellite marker","type":"related"},{"name":"rinucleotide repeat microsatellite","type":"exact"},{"name":"trinucleotide repeat microsatellite feature","type":"exact"},{"name":"trinucleotide repeat microsatellite locus","type":"exact"}],"termid":"SO:0000291"}


id: PBO:0070898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 6","termid":"PBO:0070898"}


id: PBO:0061217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8 pseudogene 1","termid":"PBO:0061217"}


id: GO:0102174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NADH + O2 = 4alpha-carboxy-4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol-4alpha-methyl oxidase activity","secondary_identifiers":["RHEA:58864","MetaCyc:RXN-11927"],"termid":"GO:0102174"}


id: SO:0000621
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III to transcribe predominantly noncoding RNAs. This promoter contains a proximal sequence element (PSE) and a TATA box upstream of the gene that it regulates. Transcription can also be activated by a distal sequence element (DSE), which is located further upstream. ","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_3","synonyms":[{"name":"RNApol III promoter type 3","type":"exact"}],"termid":"SO:0000621"}


id: GO:0097720
data:
  {"annotated_genes":["SJAG_04668","SJAG_03793","SJAG_02858","SJAG_03799","SJAG_03631","SJAG_03879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88584,94287,109542,114698],"is_not":false,"summary":null,"term":"GO:0097720"},{"annotations":[112296,97158],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a transcription factor as a consequence of dephosphorylation by Ca(2+)-activated calcineurin. The process begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin is a calcium- and calmodulin-dependent serine/threonine protein phosphatase with a conserved function in eukaryotic species from yeast to humans. In yeast and fungi, calcineurin regulates stress signaling and cell cycle, and sporulation and virulence in pathogenic fungi. In metazoans, calcineurin is involved in cell commitment, organogenesis and organ development and immune function of T-lymphocytes. By a conserved mechanism, calcineurin phosphatase activates fungal Crz1 and mammalian NFATc by dephosphorylation and translocation of these transcription factors to the nucleus to regulate gene expression.","definition_xrefs":["GOC:di","PMID:26851544","PMID:25878052","PMID:25655284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcineurin signaling","type":"related"},{"name":"calcineurin-mediated signalling","type":"exact"}],"termid":"GO:0097720","terms_by_termid":{"GO:0097720":null,"GO:0106057":null}}


id: PBO:0058793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7162","termid":"PBO:0058793"}


id: FYPO:0003898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glycerol and ethanol as the carbon sources.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on glycerol/ethanol carbon source","synonyms":[{"name":"normal cell population growth on glycerol/ethanol carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glycerol/ethanol carbon source","type":"exact"}],"termid":"FYPO:0003898"}


id: PBO:0081827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 750","termid":"PBO:0081827"}


id: PBO:0063719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I","termid":"PBO:0063719"}


id: PR:Q9P6L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis protein end4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.11","synonyms":[{"name":"SLA2 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-end4","type":"exact"}],"termid":"PR:Q9P6L5"}


id: PBO:0057220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378h","termid":"PBO:0057220"}


id: PBO:0111423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo7","termid":"PBO:0111423"}


id: PBO:0029173
data:
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id: GO:1905552
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id: MOD:00994
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id: PBO:0059140
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id: GO:0005158
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id: PBO:0026794
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id: GO:0042594
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id: GO:0009749
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id: GO:0042592
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id: PBO:0025514
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id: PBO:0089110
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id: GO:0052789
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id: GO:0002266
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id: PBO:0018181
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id: PBO:0080534
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id: FYPO:0005669
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to hydroxyurea. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to hydroxyurea (obsolete FYPO:0005669)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to HU","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to hydroxyurea","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to hydroxyurea","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005669"}


id: PBO:0055731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain 7","termid":"PBO:0055731"}


id: PBO:0058940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocyte inducing transcription factor","termid":"PBO:0058940"}


id: GO:0061927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport macromolecular complex of the chloroplast membrane that interacts with the precursor proteins and contains components of both the outer membrane and inner membrane complexes containing at least Toc75, Toc159, Toc34 and Tic110.","definition_xrefs":["PMID:28745032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"TOC-TIC supercomplex I","termid":"GO:0061927"}


id: PBO:0030645
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_pH","termid":"PBO:0030645"}


id: PBO:0075616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 2B","termid":"PBO:0075616"}


id: GO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of compounds containing arsenic, including arsenates, arsenites, and arsenides. These include transport of such compounds away from sensitive areas and to compartments or complexes whose purpose is sequestration of arsenic or arsenic-containing compounds.","definition_xrefs":["PMID:11313333","GOC:kmv","PMID:20221439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to arsenic-containing substance","termid":"GO:0046685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of arsenic-containing substance","synonyms":[{"name":"detoxification of arsenic","type":"exact"}],"termid":"GO:0071722"}


id: PBO:0062819
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast associated Ig-like receptor","termid":"PBO:0062819"}


id: GO:0140649
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a hyphal filament from one host cell to another. This process involves the clearance of plant-derived plasmodesmal occlusion materials, cytoskeleton based constriction of invasive hypha to traverse plasmodesmata. Septins and F-actin are reorganized into an hourglass shape at the point of maximum hyphal constriction.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-to-cell migration in host","termid":"GO:0106259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-to-cell migration by invasive hypha","synonyms":[{"name":"host tissue colonization","type":"broad"},{"name":"invasive growth","type":"broad"},{"name":"invasive hyphae formation","type":"exact"},{"name":"plant tissue colonization","type":"broad"}],"termid":"GO:0140649"}


id: PBO:0043621
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 10","termid":"PBO:0043621"}


id: GO:0004452
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  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98048],"is_not":false,"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.","definition_xrefs":["RHEA:23284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191382","EC:5.3.3.2","KEGG_REACTION:R01123","MetaCyc:IPPISOM-RXN"],"synonyms":[{"name":"IPP isomerase activity","type":"related"},{"name":"isopentenyl-diphosphate D-isomerase activity","type":"exact"},{"name":"isopentenyl-diphosphate delta3-delta2-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate delta-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate isomerase activity","type":"related"},{"name":"methylbutenylpyrophosphate isomerase activity","type":"related"}],"termid":"GO:0004452","terms_by_termid":{"GO:0004452":null}}


id: PBO:0002608
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4 (predicted)","termid":"PBO:0002608"}


id: _global:interacts_with_via_parasite-host_interaction
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"_global:symbiotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","secondary_identifiers":["RO:0002443"],"termid":"_global:interacts_with_via_parasite-host_interaction"}


id: PBO:0031512
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mating_efficiency","termid":"PBO:0031512"}


id: PBO:0042190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D2","termid":"PBO:0042190"}


id: PBO:0024841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-24(28) sterol reductase Erg4","termid":"PBO:0024841"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: PBO:0027800
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_triplatin_tetranitrate","termid":"PBO:0027800"}


id: PBO:0073014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit beta","termid":"PBO:0073014"}


id: GO:0061106
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061105"},{"relation_name":"negatively_regulates","term_name":"stomach neuroendocrine cell differentiation","termid":"GO:0061102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061106"}


id: GO:1904571
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["GO_REF:0000058","PMID:21685449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of selenocysteine incorporation","termid":"GO:1904569"},{"relation_name":"positively_regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of selenocysteine incorporation","synonyms":[{"name":"activation of selenocysteine incorporation","type":"narrow"},{"name":"up regulation of selenocysteine incorporation","type":"exact"},{"name":"up-regulation of selenocysteine incorporation","type":"exact"},{"name":"upregulation of selenocysteine incorporation","type":"exact"}],"termid":"GO:1904571"}


id: GO:2000344
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the acrosome reaction.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acrosome reaction","termid":"GO:0060046"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acrosome reaction","termid":"GO:2000344"}


id: PBO:0075237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 9","termid":"PBO:0075237"}


id: GO:0016491
data:
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id: GO:0001156
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id: GO:0002918
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of B cell anergy","termid":"GO:0002671"},{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell anergy","termid":"GO:0002917"},{"relation_name":"negatively_regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral B cell anergy","synonyms":[{"name":"down regulation of peripheral B cell anergy","type":"exact"},{"name":"down-regulation of peripheral B cell anergy","type":"exact"},{"name":"downregulation of peripheral B cell anergy","type":"exact"},{"name":"inhibition of peripheral B cell anergy","type":"narrow"}],"termid":"GO:0002918"}


id: PBO:0061153
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id: GO:0047178
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-radyl-2-lyso-sn-glycero-3-phosphoethanolamine + 1-radyl-2-acyl-sn-glycero-3-phosphocholine = 1-radyl-2-lyso-sn-glycero-3-phosphocholine + 1-radyl-2-acyl-sn-glycero-3-phosphoethanolamine.","definition_xrefs":["EC:2.3.1.148","MetaCyc:2.3.1.148-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerophospholipid acyltransferase (CoA-dependent) activity","secondary_identifiers":["RHEA:20972"],"synonyms":[{"name":"1-organyl-2-acyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine acyltransferase (CoA-dependent)","type":"related"}],"termid":"GO:0047178"}


id: PBO:0039865
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 27","termid":"PBO:0039865"}


id: GO:0015628
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are secreted across the outer membrane of Gram-negative bacteria by the type II secretion system. Proteins using this pathway are first translocated across the cytoplasmic membrane via the Sec or Tat pathways.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein secretion by the type II secretion system","synonyms":[{"name":"protein secretion by the T2S","type":"exact"},{"name":"protein secretion by the T2SS","type":"exact"},{"name":"protein secretion by the general secretion pathway","type":"related"},{"name":"protein secretion by the general secretory pathway","type":"related"},{"name":"protein secretion by the type II protein secretion system","type":"exact"},{"name":"type II protein secretion system","type":"exact"}],"termid":"GO:0015628"}


id: PBO:0079626
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 N pseudogene 1","termid":"PBO:0079626"}


id: PBO:0083116
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; binds tightly to ssDNA, which disrupts interaction with the MCM helicase and stalls it during replication stress; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes","termid":"PBO:0083116"}


id: PBO:0041396
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C6","termid":"PBO:0041396"}


id: GO:0103078
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + quercetin 3-O-rhamnoside + UDP-L-rhamnose = quercetin-3-rhamnoside-7-rhamnoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"quercetin 3-rhamnoside 7-O-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4162","RHEA:61184"],"termid":"GO:0103078"}


id: GO:0042478
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eye photoreceptor cell development","synonyms":[{"name":"regulation of eye photoreceptor development","type":"exact"}],"termid":"GO:0042478"}


id: PATO:0002177
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the middle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the medial side","termid":"PATO:0002177"}


id: GO:0010325
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of raffinose family oligosaccharides (RFOs, such as raffinose, stachyose, verbascose and other molecules with a higher degree of galactosyl polymerization).","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"raffinose family oligosaccharide biosynthetic process","synonyms":[{"name":"raffinose family oligosaccharide biosynthesis","type":"exact"}],"termid":"GO:0010325"}


id: GO:0018683
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-camphor + putidaredoxin + O2 = (+)-exo-5-hydroxycamphor + oxidized putidaredoxin + H2O.","definition_xrefs":["EC:1.14.15.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"camphor 5-monooxygenase activity","secondary_identifiers":["MetaCyc:R541-RXN","UM-BBD_enzymeID:e0300","RHEA:13525"],"synonyms":[{"name":"(+)-camphor,reduced putidaredoxin:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"2-bornanone 5-exo-hydroxylase activity","type":"related"},{"name":"D-camphor-exo-hydroxylase activity","type":"related"},{"name":"bornanone 5-exo-hydroxylase activity","type":"related"},{"name":"camphor 5-exo-hydroxylase activity","type":"related"},{"name":"camphor 5-exo-methylene hydroxylase activity","type":"exact"},{"name":"camphor 5-exohydroxylase activity","type":"related"},{"name":"camphor hydroxylase activity","type":"related"},{"name":"camphor methylene hydroxylase activity","type":"related"},{"name":"cytochrome p450-cam activity","type":"related"},{"name":"d-camphor monooxygenase activity","type":"related"},{"name":"methylene hydroxylase activity","type":"related"},{"name":"methylene monooxygenase activity","type":"related"}],"termid":"GO:0018683"}


id: PBO:0088848
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id: FYPO:0007802
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form linear element that are shorter than normal.","definition_xrefs":["PMID:33825974","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element morphology","termid":"FYPO:0004585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"short linear element","synonyms":[{"name":"decreased linear element length","type":"exact"},{"name":"reduced linear element length","type":"exact"}],"termid":"FYPO:0007802"}


id: GO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine secretion","termid":"GO:0048243"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"norepinephrine secretion, neurotransmission","synonyms":[{"name":"noradrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061533"}


id: PBO:0027864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_acetylation","termid":"PBO:0027864"}


id: GO:0014052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"regulation of GABA secretion","type":"exact"}],"termid":"GO:0014052"}


id: SO:0001732
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_methylation_site","synonyms":[{"name":"H3K27 methylation site","type":"exact"}],"termid":"SO:0001732"}


id: GO:0052032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the normal execution of the  inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host inflammatory response","secondary_identifiers":["GO:0052256"],"synonyms":[{"name":"modulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host inflammatory response","type":"exact"},{"name":"perturbation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052032"}


id: PR:O14233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage stimulation factor subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00546","PRO:DNx","PANTHER:PTHR19980:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3'-end-processing protein rna14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.17","secondary_identifiers":["UniProtKB:O14233"],"synonyms":[{"name":"Spom972h-CSTF3","type":"exact"}],"termid":"PR:O14233"}


id: GO:0007194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of adenylate cyclase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cyclase activity","termid":"GO:0031280"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase activity","termid":"GO:0045761"},{"relation_name":"is_a","term_name":"negative regulation of lyase activity","termid":"GO:0051350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase inhibitor","type":"related"},{"name":"down regulation of adenylate cyclase activity","type":"exact"},{"name":"down-regulation of adenylate cyclase activity","type":"exact"},{"name":"downregulation of adenylate cyclase activity","type":"exact"},{"name":"inhibition of adenylate cyclase activity","type":"narrow"},{"name":"negative regulation of adenylyl cyclase activity","type":"exact"}],"termid":"GO:0007194"}


id: PBO:0058608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6740","termid":"PBO:0058608"}


id: PBO:0084523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs family (Chs5p-Arf1p-binding proteins); members include Bch1p, Bch2p, Bud7p, and Chs6p; ChAPs family proteins form the exomer complex with Chs5p to mediate export of specific cargo proteins from the Golgi to the plasma membrane; interacts selectively with the activated, GTP-bound form of Arf1p; may interact with ribosomes; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0084523"}


id: PBO:0018119
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective In Sister chromatid disjoining","termid":"PBO:0018119"}


id: PBO:0083675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoribonuclease; subunit of the mRNA cleavage and polyadenylation specificity complex; required for 3' processing, splicing, and transcriptional termination of mRNAs and snoRNAs; protein abundance increases in response to DNA replication stress; YSH1 has a paralog, SYC1, that arose from the whole genome duplication","termid":"PBO:0083675"}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: GO:0034722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a gamma-linked glutamate bond.","definition_xrefs":["MEROPS_fam:C26","EC:3.4.19.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamyl-peptidase activity","synonyms":[{"name":"gamma-glutamyl hydrolase activity","type":"related"}],"termid":"GO:0034722"}


id: PBO:0034677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_envelope_during_vegetative_growth","termid":"PBO:0034677"}


id: PBO:0084605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YOR240W was originally annotated as an independent ORF, but was later demonstrated to be part of an adjacent ORF, YOR239W, via a +1 translational frameshift","termid":"PBO:0084605"}


id: GO:0009778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic phosphorylation process in which ATP synthesis is driven by a proton gradient generated across the thylakoid membrane. Involves only photosystem I.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic phosphorylation","termid":"GO:0009777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"cyclic photosynthetic phosphorylation","termid":"GO:0009778"}


id: PBO:0005376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit 8 (predicted)","termid":"PBO:0005376"}


id: PBO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP complex subunit (predicted)","termid":"PBO:0002288"}


id: PBO:0081897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 848, pseudogene","termid":"PBO:0081897"}


id: GO:0014711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"}


id: GO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009172"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGMP catabolic process","synonyms":[{"name":"dGMP breakdown","type":"exact"},{"name":"dGMP catabolism","type":"exact"},{"name":"dGMP degradation","type":"exact"}],"termid":"GO:0046055"}


id: GO:1905088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptonemal complex assembly.","definition_xrefs":["PMID:24797370","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of synaptonemal complex assembly","termid":"GO:0090173"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"synaptonemal complex assembly","termid":"GO:0007130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of synaptonemal complex assembly","synonyms":[{"name":"activation of synaptonemal complex assembly","type":"narrow"},{"name":"activation of synaptonemal complex formation","type":"narrow"},{"name":"positive regulation of synaptonemal complex formation","type":"exact"},{"name":"up regulation of synaptonemal complex assembly","type":"exact"},{"name":"up regulation of synaptonemal complex formation","type":"exact"},{"name":"up-regulation of synaptonemal complex assembly","type":"exact"},{"name":"up-regulation of synaptonemal complex formation","type":"exact"},{"name":"upregulation of synaptonemal complex assembly","type":"exact"},{"name":"upregulation of synaptonemal complex formation","type":"exact"}],"termid":"GO:1905088"}


id: GO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of the Arg-Ile bond in factor X to form factor Xa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor IXa activity (obsolete GO:0003803)","synonyms":[{"name":"Christmas factor activity","type":"related"},{"name":"activated blood coagulation factor XI","type":"related"},{"name":"activated blood-coagulation factor IX","type":"related"},{"name":"activated christmas factor","type":"related"},{"name":"autoprothrombin II","type":"related"},{"name":"blood coagulation factor IX activity","type":"exact"},{"name":"blood platelet cofactor II","type":"related"},{"name":"blood-coagulation factor IXa","type":"related"},{"name":"coagulation factor IXa activity","type":"exact"}],"termid":"GO:0003803"}


id: PBO:0068388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 207","termid":"PBO:0068388"}


id: PBO:0065370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin 1","termid":"PBO:0065370"}


id: PBO:0031678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031678"}


id: PBO:0033774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_spindle_pole_body_localization","termid":"PBO:0033774"}


id: GO:0015314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + aminotriazole(in) = H+(in) + aminotriazole(out).","definition_xrefs":["TC:2.A.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"aminotriazole transmembrane transporter activity","termid":"GO:1901478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"aminotriazole:proton antiporter activity","synonyms":[{"name":"aminotriazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015314"}


id: FYECO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with serine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, serine nitrogen source","synonyms":[{"name":"glucose minimal medium, serine nitrogen source","type":"exact"}],"termid":"FYECO:0000374"}


id: PBO:0028673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport","termid":"PBO:0028673"}


id: GO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine methylation","termid":"GO:0018125"}


id: PBO:0028645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_morphology","termid":"PBO:0028645"}


id: PBO:0043725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 4","termid":"PBO:0043725"}


id: PBO:0073454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 3","termid":"PBO:0073454"}


id: PBO:0064042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 76","termid":"PBO:0064042"}


id: PBO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 4 pseudogene","termid":"PBO:0050927"}


id: GO:1904779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to centrosome","synonyms":[{"name":"regulation of protein localisation to centrosome","type":"exact"}],"termid":"GO:1904779"}


id: FYPO:0007607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins later than normal when cells are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of mitotic DNA replication initiation","termid":"FYPO:0006031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen starvation","synonyms":[{"name":"delayed mitotic DNA replication initiation during recovery from nitrogen starvation","type":"exact"},{"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen depletion","type":"exact"},{"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007607"}


id: PBO:0110349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMPK1 pseudogene 1","termid":"PBO:0110349"}


id: PBO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 2","termid":"PBO:0046525"}


id: PBO:0036416
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Beta Glucan synthase 1","termid":"PBO:0036416"}


id: GO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of cross-linked glycoproteins.","definition_xrefs":["PMID:18508691","GOC:mah","PMID:7048321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"glycoprotein network","secondary_identifiers":["Wikipedia:Extensin"],"synonyms":[{"name":"extensin","type":"exact"}],"termid":"GO:0048222"}


id: PATO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000026 carbohydrate composition (obsolete PATO:0000026)","termid":"PATO:0000026"}


id: GO:1904762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast differentiation.","definition_xrefs":["GO_REF:0000058","PMID:20533548","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myofibroblast differentiation","termid":"GO:1904760"},{"relation_name":"positively_regulates","term_name":"myofibroblast differentiation","termid":"GO:0036446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast differentiation","synonyms":[{"name":"activation of myofibroblast cell differentiation","type":"narrow"},{"name":"activation of myofibroblast differentiation","type":"narrow"},{"name":"positive regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast differentiation","type":"exact"},{"name":"up-regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up-regulation of myofibroblast differentiation","type":"exact"},{"name":"upregulation of myofibroblast cell differentiation","type":"exact"},{"name":"upregulation of myofibroblast differentiation","type":"exact"}],"termid":"GO:1904762"}


id: PBO:0085985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; null mutation results in a decrease in plasma membrane electron transport; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085985"}


id: GO:0042910
data:
  {"annotated_genes":["SJAG_01145","SJAG_03951","SJAG_05213","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92674,113178],"is_not":false,"summary":null,"term":"GO:0042910"},{"annotations":[114084,92253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of a xenobiotic from one side of a membrane to the other. A xenobiotic is a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:go_curators","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"xenobiotic transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-597628","GO:0015238","GO:0015239","GO:0015564","GO:0090484","GO:0015559","Reactome:R-HSA-5625574"],"synonyms":[{"name":"drug transmembrane transporter activity","type":"related"},{"name":"drug transporter activity","type":"related"},{"name":"multidrug efflux pump activity","type":"related"},{"name":"multidrug transporter activity","type":"related"},{"name":"multidrug, alkane resistant pump activity","type":"related"},{"name":"xenobiotic transporter activity","type":"related"}],"termid":"GO:0042910","terms_by_termid":{"GO:0008559":null,"GO:0042910":null}}


id: GO:1904694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:22158624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"is_a","term_name":"negative regulation of vasoconstriction","termid":"GO:0045906"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"down regulation of vascular smooth muscle contraction","type":"exact"},{"name":"down-regulation of vascular smooth muscle contraction","type":"exact"},{"name":"downregulation of vascular smooth muscle contraction","type":"exact"},{"name":"inhibition of vascular smooth muscle contraction","type":"narrow"},{"name":"negative regulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:1904694"}


id: PBO:0069348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 608, pseudogene","termid":"PBO:0069348"}


id: PBO:0083459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene IFH1","termid":"PBO:0083459"}


id: GO:0045758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin polymerization and/or depolymerization (obsolete GO:0045758)","synonyms":[{"name":"positive regulation of actin polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045758"}


id: GO:2000492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-18-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-18-mediated signaling pathway","termid":"GO:0035655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-18-mediated signaling pathway","synonyms":[{"name":"regulation of interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:2000492"}


id: PBO:0082506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificty) and Som1p","termid":"PBO:0082506"}


id: PBO:0041047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD3 opposite strand","termid":"PBO:0041047"}


id: GO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process, catalyzed by subunits of nonribosomal peptide synthase. The amino acid is adenylated at its carboxylate group (ATP-dependent) then transferred to the thiol group of an enzyme-bound phosphopantetheine cofactor.","definition_xrefs":["GOC:jl","PMID:9712910","PMID:9250661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid adenylylation by nonribosomal peptide synthase","synonyms":[{"name":"amino acid adenylation by NRPS","type":"exact"},{"name":"amino acid adenylation by nonribosomal peptide synthase","type":"exact"}],"termid":"GO:0043042"}


id: GO:0034266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the cytokinin 6-isopentenyladenine.","definition_xrefs":["GOC:mah","PMID:18216168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin catabolic process","termid":"GO:0009823"},{"relation_name":"is_a","term_name":"isopentenyl adenine metabolic process","termid":"GO:0034264"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenyl adenine catabolic process","synonyms":[{"name":"isopentenyl adenine breakdown","type":"exact"},{"name":"isopentenyl adenine catabolism","type":"exact"},{"name":"isopentenyl adenine degradation","type":"exact"},{"name":"isopentenyladenine catabolic process","type":"exact"}],"termid":"GO:0034266"}


id: GO:0075089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont G protein-coupled receptor signal transduction (obsolete GO:0075089)","synonyms":[{"name":"negative regulation by host of symbiont G-protein coupled receptor protein signal transduction","type":"exact"}],"termid":"GO:0075089"}


id: GO:0050833
data:
  {"annotated_genes":["SJAG_01924","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90573,110335],"is_not":false,"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyruvate, 2-oxopropanoate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372342"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0050833","terms_by_termid":{"GO:0050833":null}}


id: PBO:0060485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 7","termid":"PBO:0060485"}


id: PBO:0050622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 14","termid":"PBO:0050622"}


id: PBO:0063857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosine interaction domain containing 1","termid":"PBO:0063857"}


id: PBO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 130 pseudogene","termid":"PBO:0070205"}


id: GO:1905411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cohesin unloading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cohesin unloading","termid":"GO:1905339"},{"relation_name":"is_a","term_name":"regulation of mitotic cohesin unloading","termid":"GO:1905410"},{"relation_name":"positively_regulates","term_name":"mitotic cohesin unloading","termid":"GO:0061781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cohesin unloading","termid":"GO:1905411"}


id: PBO:0053346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 229","termid":"PBO:0053346"}


id: GO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA.","definition_xrefs":["MetaCyc:1.1.1.178-RXN","EC:1.1.1.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:13281"],"synonyms":[{"name":"(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase activity","type":"related"},{"name":"2-methyl-3-hydroxy-butyryl CoA dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"}],"termid":"GO:0047015"}


id: GO:0015135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucuronate from one side of a membrane to the other. Glucuronate is the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}


id: PBO:0071918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 3","termid":"PBO:0071918"}


id: PBO:0075117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 166","termid":"PBO:0075117"}


id: PBO:0055743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 beta","termid":"PBO:0055743"}


id: FYPO:0000423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of endocytosis is decreased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of endocytosis during vegetative growth","synonyms":[{"name":"decreased rate of actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"decreased rate of endocytosis during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: decreased rate during vegetative growth","type":"related"},{"name":"reduced rate of endocytosis during vegetative growth","type":"exact"}],"termid":"FYPO:0000423"}


id: GO:0038084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor signaling pathway","synonyms":[{"name":"VEGF signaling","type":"exact"},{"name":"VEGF-activated signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:0038084"}


id: PBO:0004255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0004255"}


id: PR:Q10301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0652 protein C22H10.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.08","synonyms":[{"name":"Spom972h-SPAC22H10.08","type":"exact"}],"termid":"PR:Q10301"}


id: PBO:0005093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAZ domain","termid":"PBO:0005093"}


id: GO:0008113
data:
  {"annotated_genes":["SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91752],"is_not":false,"summary":null,"term":"GO:0008113"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["EC:1.8.4.11","GOC:mah","PMID:11169920","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptide-methionine (S)-S-oxide reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072561","MetaCyc:RXN-8668","GO:0033742","Reactome:R-HSA-1222363","Reactome:R-HSA-5676940","RHEA:14217"],"synonyms":[{"name":"MsrA","type":"related"},{"name":"methionine S-oxide reductase (S-form oxidizing) activity","type":"related"},{"name":"methionine S-oxide reductase activity","type":"broad"},{"name":"methionine sulfoxide (protein) reductase activity","type":"exact"},{"name":"methionine sulfoxide reductase A activity","type":"related"},{"name":"methionine sulfoxide reductase activity","type":"broad"},{"name":"methionine sulphoxide reductase A activity","type":"related"},{"name":"peptide Met(O) reductase activity","type":"related"},{"name":"peptide methionine sulfoxide reductase activity","type":"related"},{"name":"peptide-L-methionine:thioredoxin-disulfide S-oxidoreductase [L-methionine (S)-S-oxide-forming] activity","type":"related"},{"name":"peptide-methionine-(S)-S-oxide reductase activity","type":"exact"},{"name":"protein-methionine-S-oxide reductase activity","type":"exact"}],"termid":"GO:0008113","terms_by_termid":{"GO:0008113":null}}


id: PBO:0064316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 5","termid":"PBO:0064316"}


id: PBO:0090493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA-sterol acyltransferase Are1","termid":"PBO:0090493"}


id: GO:0009027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tartrate + NAD+ = oxaloglycolate + NADH + H+.","definition_xrefs":["EC:1.1.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tartrate dehydrogenase activity","secondary_identifiers":["RHEA:15209","MetaCyc:TARTRATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"mesotartrate dehydrogenase activity","type":"related"},{"name":"tartrate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0009027"}


id: GO:0003706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II in response to a ligand.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand-regulated transcription factor activity (obsolete GO:0003706)","synonyms":[{"name":"ligand-regulated transcription factor activity","type":"exact"}],"termid":"GO:0003706"}


id: PBO:0066277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member A, pseudogene","termid":"PBO:0066277"}


id: GO:0016076
data:
  {"annotated_genes":["SJAG_03745","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88432,109449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of snRNA, small nuclear RNA, low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snRNA breakdown","type":"exact"},{"name":"snRNA catabolism","type":"exact"},{"name":"snRNA degradation","type":"exact"}],"termid":"GO:0016076","terms_by_termid":{"GO:0071037":null}}


id: PBO:0081425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 280C","termid":"PBO:0081425"}


id: GO:1900220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that contributes to bone trabecula morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"bone trabecula morphogenesis","termid":"GO:0061430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis","synonyms":[{"name":"semaphorin-plexin signaling pathway of bone trabecula morphogenesis","type":"exact"},{"name":"semaphorin-plexin signalling pathway of bone trabecula morphogenesis","type":"exact"}],"termid":"GO:1900220"}


id: PBO:0078281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 14-1","termid":"PBO:0078281"}


id: PR:O13713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab2 gene.","definition_xrefs":["UniProtKB:O13713","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear polyadenylated RNA-binding protein nab2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.06c","synonyms":[{"name":"Spom972h-nab2","type":"exact"}],"termid":"PR:O13713"}


id: GO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 4-kinase activity","termid":"GO:0000830"}


id: PBO:0072831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 1","termid":"PBO:0072831"}


id: PBO:0054688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2097","termid":"PBO:0054688"}


id: PBO:0038398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within,_negative_effect","termid":"PBO:0038398"}


id: MOD:01319
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:12422359","PubMed:11510821","Unimod:176#H","PubMed:9448752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of BHT quinone methide to histidine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01319"}


id: PBO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 11","termid":"PBO:0047380"}


id: PBO:0069631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 908, pseudogene","termid":"PBO:0069631"}


id: PBO:0068880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 120, pseudogene","termid":"PBO:0068880"}


id: GO:0062031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A MAPK cascade containing at least the Kss1 MAP kinase. It starts with the activation of Ste20, a MAP4K, which activates Ste11, a MAP3K, which in turn activate Ste7, a MAP2K, which activates Kss1. The kinases in each tier phosphorylate and activate the kinases in the downstream tier. The filamentous growth MAPK cascade is activated as a result of partial nutrient deprivation and  results in filamentous growth.","definition_xrefs":["PMID:33335117","PMID:17604854","PMID:38187743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"filamentous growth MAPK cascade","termid":"GO:0062031"}


id: SO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing both box C/D and box H/ACA sequence motifs, guiding both the methylation and pseudouridylation of snRNAs.","definition_xrefs":["PMID:17099227","PMID:24659245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-D_H_ACA_box_scaRNA_gene","synonyms":[{"name":"C/D-H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002374"}


id: PBO:0085358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheinyl transferase involved in lysine biosynthesis; converts inactive apo-form of Lys2p (alpha-aminoadipate reductase) into catalytically active holo-form by posttranslational addition of phosphopantetheine","termid":"PBO:0085358"}


id: PBO:0040952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 23","termid":"PBO:0040952"}


id: GO:0005319
data:
  {"annotated_genes":["SJAG_00587","SJAG_00230","SJAG_01095","SJAG_01590","SJAG_03741","SJAG_02957","SJAG_03100","SJAG_03710","SJAG_03172","SJAG_01731","SJAG_06440","SJAG_03746","SJAG_04370","SJAG_03050","SJAG_03416","SJAG_02132","SJAG_02581","SJAG_02897","SJAG_03338","SJAG_00589","SJAG_01225","SJAG_02375","SJAG_01229","SJAG_02516","SJAG_16459","SJAG_01470","SJAG_03851","SJAG_04984","SJAG_03721","SJAG_00576","SJAG_01945","SJAG_02323","SJAG_03718","SJAG_01722","SJAG_00018","SJAG_05209","SJAG_00669","SJAG_01305","SJAG_02114","SJAG_02943","SJAG_00355","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86743,86739,86737,86741,86740,86742,86738,86744,98511,86736,101248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[94108,90605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[96404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[104839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120013"},{"annotations":[95640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[98387,105703,97450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[90607,94110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[90608,94111,96356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[93730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[94112,96357,95642,90609,108682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[93731,112411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[95643,108684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[94113,95644,90610,108685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[99768,92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"},{"annotations":[85444,87106,103835,105717,103706,93667,94807,102916,100223,102016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"},{"annotations":[90427,112392,105555,107509,102499,104392,98783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120015"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of lipids into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03100":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8848053","Reactome:R-HSA-1369052","Reactome:R-HSA-1369028","Reactome:R-HSA-5682285","Reactome:R-HSA-174786","Reactome:R-HSA-5682311","Reactome:R-HSA-5688397","Reactome:R-HSA-5683714","Reactome:R-HSA-8866329","Reactome:R-HSA-6801250","Reactome:R-HSA-5683672"],"synonyms":[{"name":"apolipoprotein","type":"related"},{"name":"lipophorin","type":"narrow"}],"termid":"GO:0005319","terms_by_termid":{"GO:0008526":null,"GO:0017128":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0120013":null,"GO:0120014":null,"GO:0120015":null,"GO:0120019":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0170045":null,"GO:0180013":null,"GO:1990050":null}}


id: GO:1904716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:20176123","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated autophagy","termid":"GO:1904714"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0030163","GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated autophagy","synonyms":[{"name":"activation of CMA","type":"related"},{"name":"activation of chaperone-mediated autophagy","type":"narrow"},{"name":"positive regulation of CMA","type":"related"},{"name":"up regulation of CMA","type":"related"},{"name":"up regulation of chaperone-mediated autophagy","type":"exact"},{"name":"up-regulation of CMA","type":"related"},{"name":"up-regulation of chaperone-mediated autophagy","type":"exact"},{"name":"upregulation of CMA","type":"related"},{"name":"upregulation of chaperone-mediated autophagy","type":"exact"}],"termid":"GO:1904716"}


id: PBO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 1","termid":"PBO:0048135"}


id: PBO:0074224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 3","termid":"PBO:0074224"}


id: PBO:0003617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD homolog (predicted)","termid":"PBO:0003617"}


id: PBO:0038493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4","termid":"PBO:0038493"}


id: PBO:0047998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fyn related Src family tyrosine kinase","termid":"PBO:0047998"}


id: PBO:0046336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 1","termid":"PBO:0046336"}


id: PBO:0081146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP64 zinc finger protein pseudogene 1","termid":"PBO:0081146"}


id: PR:O14223
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tvp15 gene.","definition_xrefs":["UniProtKB:O14223","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.04","synonyms":[{"name":"Spom972h-tvp15","type":"exact"}],"termid":"PR:O14223"}


id: PBO:0072210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 9","termid":"PBO:0072210"}


id: GO:0010645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"regulates","term_name":"cell communication by chemical coupling","termid":"GO:0010643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by chemical coupling","termid":"GO:0010645"}


id: FYPO:0008090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic anaphase begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of mitotic anaphase B","termid":"FYPO:0008090"}


id: PBO:0054933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2347","termid":"PBO:0054933"}


id: PBO:0027798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tetraplatin","termid":"PBO:0027798"}


id: PBO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS related 2","termid":"PBO:0072562"}


id: PATO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a liquid inhering in a bearer by virtue of the bearer's ability to mix with (dissolve in) another liquid.","definition_xrefs":["Chemicool:Chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a liquid","termid":"PATO:0001548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miscibility","termid":"PATO:0001888"}


id: PBO:0031056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_undivided_germinated_spores_(obsolete_FYPO:0000321)","termid":"PBO:0031056"}


id: GO:0008473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine = L-proline + NH4.","definition_xrefs":["EC:4.3.1.12","RHEA:24368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ornithine cyclodeaminase activity","secondary_identifiers":["KEGG_REACTION:R00671","MetaCyc:ORNITHINE-CYCLODEAMINASE-RXN"],"synonyms":[{"name":"L-ornithine ammonia-lyase (cyclizing)","type":"related"},{"name":"L-ornithine ammonia-lyase (cyclizing; L-proline-forming)","type":"related"},{"name":"OCD activity","type":"related"},{"name":"ornithine cyclase (deaminating) activity","type":"related"},{"name":"ornithine cyclase activity","type":"related"}],"termid":"GO:0008473"}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107078],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: PBO:0055305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2732","termid":"PBO:0055305"}


id: GO:0098966
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the extracellular matrix that lies within the perisynaptic space.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"},{"relation_name":"part_of","term_name":"synapse-associated extracellular matrix","termid":"GO:0099535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perisynaptic extracellular matrix","synonyms":[{"name":"extrasynaptic extracellular matrix","type":"exact"},{"name":"perisynaptic ECM","type":"exact"}],"termid":"GO:0098966"}


id: GO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which DNA and associated proteins are formed into a compact, orderly structure within a nucleoid.","definition_xrefs":["GOC:bhm","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoid DNA packaging (obsolete GO:0036385)","termid":"GO:0036385"}


id: PBO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109F (pseudogene)","termid":"PBO:0044823"}


id: GO:0046627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of insulin receptor signaling pathway","termid":"GO:0046626"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to insulin stimulus","termid":"GO:1900077"},{"relation_name":"negatively_regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of insulin receptor signaling pathway","synonyms":[{"name":"down regulation of insulin receptor signaling pathway","type":"exact"},{"name":"down-regulation of insulin receptor signaling pathway","type":"exact"},{"name":"downregulation of insulin receptor signaling pathway","type":"exact"},{"name":"inhibition of insulin receptor signaling pathway","type":"narrow"},{"name":"negative regulation of insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0046627"}


id: FYPO:0004436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-prone translesion synthesis occurs to a greater extent than normal. Error-prone translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication.","definition_xrefs":["PomBase:mah","PMID:17515930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased error-prone translesion synthesis","synonyms":[{"name":"increased DNA repair via error-prone translesion synthesis","type":"exact"},{"name":"increased error-prone translesion synthesis during mitotic cell cycle","type":"related"},{"name":"increased error-prone translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0004436"}


id: GO:0032156
data:
  {"annotated_genes":["SJAG_04470","SJAG_02645","SJAG_01277","SJAG_04566","SJAG_00663","SJAG_03703","SJAG_01658","SJAG_00118","SJAG_03374","SJAG_01769","SJAG_04375","SJAG_04703","SJAG_03688"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96268,112131,102175,90675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032175"},{"annotations":[114001,94070,108953,100092,93995,114759,97120,104133,96269,97935],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[90676,96270,102176,112132],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032152"},{"annotations":[100095,97123,94073,96273],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032151"},{"annotations":[96275,90679,102179,112134],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032169"},{"annotations":[97124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005940"},{"annotations":[97936,97125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032176"}]},"cv_name":"cellular_component","definition":"The part of the cytoskeleton (the internal framework of a cell) composed of septins and associated proteins. Includes septin cytoskeleton-associated complexes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032156","terms_by_termid":{"GO:0005940":null,"GO:0032151":null,"GO:0032152":null,"GO:0032169":null,"GO:0032175":null,"GO:0032176":null,"GO:0036391":null}}


id: GO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephron over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron development","synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0072006"}


id: PBO:0078586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM59-IFT80 readthrough (NMD candidate)","termid":"PBO:0078586"}


id: PBO:0028618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U1_snRNP_binding","termid":"PBO:0028618"}


id: GO:0120188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["PMID:22767443","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of bile acid secretion","termid":"GO:0120188"}


id: PBO:0050838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IARS2 pseudogene 1","termid":"PBO:0050838"}


id: GO:0160147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(38/39/40) in tRNA = pseudouridine(38/39/40) in tRNA.","definition_xrefs":["EC:5.4.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0140101","GO:0016853"],"is_obsolete":false,"name":"tRNA pseudouridine(38-40) synthase activity","secondary_identifiers":["RHEA:22376","MetaCyc:TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN"],"synonyms":[{"name":"PSUI activity","type":"exact"},{"name":"tRNA pseudouridylate synthase","type":"exact"}],"termid":"GO:0160147"}


id: PBO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two MCB clusters regulate cell-cycle dependent cdc22+ transcription","termid":"PBO:0018254"}


id: PBO:0063784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 10","termid":"PBO:0063784"}


id: PBO:0004596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2A subunit (predicted)","termid":"PBO:0004596"}


id: FYPO:0003507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on zinc","synonyms":[{"name":"normal cell population growth in presence of zinc","type":"exact"},{"name":"normal cell population growth on zinc","type":"exact"},{"name":"normal cell population growth on zinc ion","type":"exact"},{"name":"normal cellular response to zinc","type":"related"},{"name":"normal growth on zinc ions","type":"exact"},{"name":"normal vegetative cell population growth on zinc","type":"exact"}],"termid":"FYPO:0003507"}


id: PR:Q9P6M9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00732","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.02c","secondary_identifiers":["UniProtKB:Q9P6M9"],"synonyms":[{"name":"Spom972h-rplA","type":"exact"}],"termid":"PR:Q9P6M9"}


id: GO:1904999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GO_REF:0000058","GOC:bc","PMID:22267480","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904996"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to arterial endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to arterial endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to arterial endothelial cell","type":"exact"}],"termid":"GO:1904999"}


id: FYPO:0006283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dihydroxylation of one or more proline residues in specific proteins, or at specific protein sites, does not occur.","definition_xrefs":["PMID:29083304","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein-proline dihydroxylation during vegetative growth","synonyms":[{"name":"abolished protein-proline dihydroxylation during mitotic cell cycle","type":"related"},{"name":"abolished protein-proline dioxygenation during vegetative growth","type":"exact"},{"name":"protein-proline dihydroxylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006283"}


id: GO:1904060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of locomotor rhythm.","definition_xrefs":["PMID:16310969","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of locomotor rhythm","termid":"GO:1904059"},{"relation_name":"negatively_regulates","term_name":"locomotor rhythm","termid":"GO:0045475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of locomotor rhythm","synonyms":[{"name":"down regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"down regulation of locomotor rhythm","type":"exact"},{"name":"down-regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"down-regulation of locomotor rhythm","type":"exact"},{"name":"downregulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"downregulation of locomotor rhythm","type":"exact"},{"name":"inhibition of circadian locomotor activity rhythm","type":"narrow"},{"name":"inhibition of locomotor rhythm","type":"narrow"},{"name":"negative regulation of circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:1904060"}


id: PBO:0068490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 74, pseudogene","termid":"PBO:0068490"}


id: FYPO:0007559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing diethylstilbestrol.","definition_xrefs":["PomBase:mah","PMID:33223513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on diethylstilbestrol","synonyms":[{"name":"normal cell population growth in presence of diethylstilbestrol","type":"exact"},{"name":"normal cell population growth on DES","type":"exact"},{"name":"normal cell population growth on diethylstilbestrol","type":"exact"},{"name":"normal cellular response to diethylstilbestrol","type":"related"},{"name":"normal vegetative cell population growth on diethylstilbestrol","type":"exact"}],"termid":"FYPO:0007559"}


id: FYPO:0006382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall organization is abnormal when the cell is subject to nitrogen starvation. Cell wall organization results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GO:0031505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0004805"],"is_obsolete":false,"name":"abnormal cell wall organization during nitrogen starvation","synonyms":[{"name":"abnormal cell wall organisation during nitrogen starvation","type":"exact"},{"name":"abnormal cell wall organization during nitrogen depletion","type":"exact"},{"name":"abnormal cell wall organization during nitrogen deprivation","type":"exact"},{"name":"abnormal fungal-type cell wall organization during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006382"}


id: GO:0018608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-indanone + NADPH + 1/2 O2 = NADP+ + 3-hydroxy-1-indanone.","definition_xrefs":["UM-BBD_reactionID:r0416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-indanone dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018608"}


id: GO:1902747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:17592637","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lens fiber cell differentiation","termid":"GO:1902746"},{"relation_name":"negatively_regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lens fiber cell differentiation","synonyms":[{"name":"down regulation of lens fiber cell differentiation","type":"exact"},{"name":"down regulation of lens fibre cell differentiation","type":"exact"},{"name":"down-regulation of lens fiber cell differentiation","type":"exact"},{"name":"down-regulation of lens fibre cell differentiation","type":"exact"},{"name":"downregulation of lens fiber cell differentiation","type":"exact"},{"name":"downregulation of lens fibre cell differentiation","type":"exact"},{"name":"inhibition of lens fiber cell differentiation","type":"narrow"},{"name":"inhibition of lens fibre cell differentiation","type":"narrow"},{"name":"negative regulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902747"}


id: PBO:0011065
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukaryotes","termid":"PBO:0011065"}


id: GO:0015448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type III protein (virulence-related) secretor activity (obsolete GO:0015448)","synonyms":[{"name":"type III protein (virulence-related) secretor activity","type":"exact"}],"termid":"GO:0015448"}


id: GO:1901973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to proline.","definition_xrefs":["PMID:7730362","GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proline binding","termid":"GO:1901973"}


id: PBO:0066337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2","termid":"PBO:0066337"}


id: GO:1990849
data:
  {"annotated_genes":["SJAG_01116","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103202,111369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which the vacuole is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["PMID:26283797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vacuolar localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of vacuolar localization","type":"exact"},{"name":"maintenance of vacuolar location","type":"narrow"},{"name":"maintenance of vacuole localization","type":"exact"},{"name":"maintenance of vacuole location","type":"exact"}],"termid":"GO:1990849","terms_by_termid":{"GO:1990854":null}}


id: PBO:0055674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPC antisense RNA 1","termid":"PBO:0055674"}


id: GO:0035048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a pre-mRNA splicing factor from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete splicing factor protein import into nucleus (obsolete GO:0035048)","synonyms":[{"name":"splicing factor protein transport from cytoplasm to nucleus","type":"exact"},{"name":"splicing factor protein-nucleus import","type":"exact"}],"termid":"GO:0035048"}


id: PBO:0060998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 3","termid":"PBO:0060998"}


id: PBO:0071320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 4","termid":"PBO:0071320"}


id: GO:0036224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A special chromosome region located towards one end of a chromosome that contains dispersed copies of short, repetitive DNA sequences and functions as a cis-acting element essential for presynaptic homologous chromosome pairing and chromosome-nuclear envelope attachment.","definition_xrefs":["PMID:18597662","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"pairing center","synonyms":[{"name":"homolog recognition region","type":"exact"}],"termid":"GO:0036224"}


id: SO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized outside of a lipid bilayer.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"extramembrane_polypeptide_region","secondary_identifiers":["BS:00154"],"synonyms":[{"name":"extramembrane","type":"related"},{"name":"extramembrane polypeptide region","type":"exact"},{"name":"extramembrane_region","type":"related"},{"name":"topo_dom","type":"related"}],"termid":"SO:0001072"}


id: PBO:0076852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte expressed, positive selection associated 1","termid":"PBO:0076852"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: GO:0000394
data:
  {"annotated_genes":["SJAG_00956","SJAG_01791","SJAG_03913","SJAG_01260","SJAG_04907","SJAG_00754","SJAG_03328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86848,89650,91833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006388"},{"annotations":[97504,102092,96965,113814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"Splicing of RNA via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_00956":null,"SJAG_01260":null,"SJAG_01791":null,"SJAG_03328":null,"SJAG_03913":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA splicing, via endonucleolytic cleavage and ligation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"broad"}],"termid":"GO:0000394","terms_by_termid":{"GO:0000379":null,"GO:0006388":null}}


id: PR:O14251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs120 gene.","definition_xrefs":["UniProtKB:O14251","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs120 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.05c","synonyms":[{"name":"Spom972h-trs120","type":"exact"},{"name":"TRAPP subunit trs120 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14251"}


id: PBO:0072953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase (putative)","termid":"PBO:0072953"}


id: GO:0045874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of sevenless signaling pathway","termid":"GO:0045501"},{"relation_name":"positively_regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sevenless signaling pathway","synonyms":[{"name":"activation of sevenless signaling pathway","type":"narrow"},{"name":"positive regulation of sev signaling pathway","type":"exact"},{"name":"positive regulation of sevenless signalling pathway","type":"exact"},{"name":"stimulation of sevenless signaling pathway","type":"narrow"},{"name":"up regulation of sevenless signaling pathway","type":"exact"},{"name":"up-regulation of sevenless signaling pathway","type":"exact"},{"name":"upregulation of sevenless signaling pathway","type":"exact"}],"termid":"GO:0045874"}


id: FYPO:0004014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to UV.","definition_xrefs":["PomBase:mah","PMID:7957098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to UV","synonyms":[{"name":"normal cell cycle regulation during cellular response to UV","type":"exact"},{"name":"normal cell cycle regulation during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle delay following UV exposure","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ultraviolet light","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to UV","type":"exact"}],"termid":"FYPO:0004014"}


id: PBO:0070497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 32","termid":"PBO:0070497"}


id: PBO:0040132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB16 antisense RNA 1","termid":"PBO:0040132"}


id: PBO:0040910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 14","termid":"PBO:0040910"}


id: PBO:0075090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 140","termid":"PBO:0075090"}


id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: GO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reverse transcription of an RNA molecule followed by recombination between the resultant cDNA and its homologous chromosomal allele.","definition_xrefs":["GOC:jl","PMID:8380627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"RNA-mediated DNA recombination","termid":"GO:0042152"}


id: PBO:0073378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 2","termid":"PBO:0073378"}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: PBO:0070837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 16","termid":"PBO:0070837"}


id: PBO:0005532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTP-binding protein (predicted)","termid":"PBO:0005532"}


id: PBO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S rRNA dimethylase (predicted)","termid":"PBO:0004182"}


id: PBO:0046815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid 2-hydroxylase","termid":"PBO:0046815"}


id: GO:0002828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type 2 immune response","synonyms":[{"name":"regulation of T-helper 2 type immune response","type":"narrow"},{"name":"regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002828"}


id: GO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lysophosphatidic acid (LPA), a phospholipid derivative that acts as a potent mitogen due to its activation of high-affinity G protein-coupled receptors.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lysophosphatidic acid binding","synonyms":[{"name":"LPA binding","type":"exact"}],"termid":"GO:0035727"}


id: GO:0004853
data:
  {"annotated_genes":["SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113139],"is_not":false,"summary":null,"term":"GO:0004853"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2.","definition_xrefs":["EC:4.1.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"uroporphyrinogen decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-189425","RHEA:19865","MetaCyc:UROGENDECARBOX-RXN","Reactome:R-HSA-190182"],"synonyms":[{"name":"porphyrinogen carboxy-lyase activity","type":"related"},{"name":"porphyrinogen decarboxylase activity","type":"related"},{"name":"uroporphyrinogen III decarboxylase activity","type":"related"},{"name":"uroporphyrinogen-III carboxy-lyase (coproporphyrinogen-III-forming)","type":"related"},{"name":"uroporphyrinogen-III carboxy-lyase activity","type":"related"}],"termid":"GO:0004853","terms_by_termid":{"GO:0004853":null}}


id: GO:0020003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane-bounded vacuole within a host cell in which a symbiont organism resides. The vacuole membrane is derived from both the host and symbiont.","definition_xrefs":["GOC:jl","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"extracellular membrane-bounded organelle","termid":"GO:0065010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuole","synonyms":[{"name":"SCV","type":"exact"},{"name":"Salmonella-containing vacuole","type":"narrow"},{"name":"bacterium-containing vacuole","type":"narrow"},{"name":"parasitophorous vacuole","type":"exact"},{"name":"pathogen-occupied vacuole","type":"narrow"}],"termid":"GO:0020003"}


id: GO:0060103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the collagen and cuticulin-based cuticle extracellular matrix, a collagen and cuticulin-based noncellular, multilayered structure that is synthesized by an underlying ectodermal (hypodermal) cell layer.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete collagen and cuticulin-based cuticle extracellular matrix part (obsolete GO:0060103)","termid":"GO:0060103"}


id: GO:0021798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain dorsal/ventral pattern formation","synonyms":[{"name":"forebrain dorsal-ventral pattern formation","type":"exact"},{"name":"forebrain dorsoventral pattern formation","type":"exact"}],"termid":"GO:0021798"}


id: GO:1900120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor binding","synonyms":[{"name":"regulation of receptor ligand","type":"narrow"}],"termid":"GO:1900120"}


id: PBO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin deacetylase Cda1","termid":"PBO:0002332"}


id: PR:O13742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vph1 gene.","definition_xrefs":["UniProtKB:O13742","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.07c","synonyms":[{"name":"Spom972h-vph1","type":"exact"},{"name":"V-ATPase a subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar ATPase 91 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump a subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton translocating ATPase subunit a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13742"}


id: GO:0018448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymethylmethylsilanediol + O2 + 2 H+ + 2 e- = formylmethylsilanediol + 2 H2O.","definition_xrefs":["UM-BBD_reactionID:r0638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxymethylmethylsilanediol oxidase activity","termid":"GO:0018448"}


id: GO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 acetylation (obsolete GO:0043966)","termid":"GO:0043966"}


id: PBO:0086545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR102C is not an essential gene; homozygous diploid deletion strain exhibits high budding index","termid":"PBO:0086545"}


id: SO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a 7SK RNA (SO:0002340).","definition_xrefs":["PMID:21853533","PMID:19246988","PMID:27369380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK_gene","synonyms":[{"name":"7SK RNA gene","type":"exact"},{"name":"RNA 7SK gene","type":"exact"}],"termid":"SO:0002341"}


id: PATO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000204 absolute locomotor_activity (obsolete PATO:0000204)","termid":"PATO:0000204"}


id: PBO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-5 sterol desaturase Erg31","termid":"PBO:0000667"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: GO:0009392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GlcNAc-1,6-anhMurNAc-L-Ala-gamma-D-Glu-DAP-D-Ala + H2O glcNAc-1,6-anhMurNAc + L-Ala-gamma-D-Glu-DAP-D-Ala.","definition_xrefs":["MetaCyc:RXN0-5225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-anhydromuramoyl-L-alanine amidase activity","termid":"GO:0009392"}


id: SO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000600 edited_by_A_to_I_substitution (obsolete SO:0000600)","termid":"SO:0000600"}


id: PBO:0051252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-13-1 (pseudogene)","termid":"PBO:0051252"}


id: GO:0060037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pharyngeal system development","termid":"GO:0060037"}


id: PBO:0088769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator complex subunit Bur6","termid":"PBO:0088769"}


id: GO:0014060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of epinephrine secretion","synonyms":[{"name":"regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0014060"}


id: PBO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 7","termid":"PBO:0071466"}


id: GO:0003091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Renal process involved in the maintenance of an internal steady state of water in the body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"multicellular organismal-level water homeostasis","termid":"GO:0050891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal water homeostasis","synonyms":[{"name":"water homeostasis by the renal system","type":"exact"}],"termid":"GO:0003091"}


id: PBO:0080459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2 like","termid":"PBO:0080459"}


id: GO:0009973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + AMP + 2 H+ + sulfite = adenosine 5'-phosphosulfate + AH2.","definition_xrefs":["PMID:5421934","RHEA:24240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"adenylyl-sulfate reductase activity","secondary_identifiers":["MetaCyc:ADENYLYLSULFATE-REDUCTASE-RXN","EC:1.8.99.2"],"synonyms":[{"name":"APS reductase activity","type":"related"},{"name":"adenosine phosphosulfate reductase activity","type":"related"},{"name":"adenylyl-sulphate reductase activity","type":"related"}],"termid":"GO:0009973"}


id: PBO:0088264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-amylase homolog Aah1","termid":"PBO:0088264"}


id: GO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic anion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"volume-sensitive anion channel activity","secondary_identifiers":["Reactome:R-HSA-8941543"],"synonyms":[{"name":"volume-regulated channel","type":"broad"}],"termid":"GO:0005225"}


id: GO:1905166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysosomal protein catabolic process.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process in the vacuole","termid":"GO:1904351"},{"relation_name":"is_a","term_name":"regulation of lysosomal protein catabolic process","termid":"GO:1905165"},{"relation_name":"negatively_regulates","term_name":"lysosomal protein catabolic process","termid":"GO:1905146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of lysosomal protein catabolic process","synonyms":[{"name":"down regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"down regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"down regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"down regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"down regulation of lysosomal protein catabolic process","type":"exact"},{"name":"down regulation of lysosomal protein catabolism","type":"exact"},{"name":"down regulation of lysosomal protein degradation","type":"exact"},{"name":"down regulation of lysosomal proteolysis","type":"related"},{"name":"down regulation of proteolysis within lysosome","type":"related"},{"name":"down-regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"down-regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"down-regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"down-regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"down-regulation of lysosomal protein catabolic process","type":"exact"},{"name":"down-regulation of lysosomal protein catabolism","type":"exact"},{"name":"down-regulation of lysosomal protein degradation","type":"exact"},{"name":"down-regulation of lysosomal proteolysis","type":"related"},{"name":"down-regulation of proteolysis within lysosome","type":"related"},{"name":"downregulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"downregulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"downregulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"downregulation of cellular protein degradation in lysosome","type":"exact"},{"name":"downregulation of lysosomal protein catabolic process","type":"exact"},{"name":"downregulation of lysosomal protein catabolism","type":"exact"},{"name":"downregulation of lysosomal protein degradation","type":"exact"},{"name":"downregulation of lysosomal proteolysis","type":"related"},{"name":"downregulation of proteolysis within lysosome","type":"related"},{"name":"inhibition of cellular protein breakdown in lysosome","type":"narrow"},{"name":"inhibition of cellular protein catabolic process in lysosome","type":"narrow"},{"name":"inhibition of cellular protein catabolism in lysosome","type":"narrow"},{"name":"inhibition of cellular protein degradation in lysosome","type":"narrow"},{"name":"inhibition of lysosomal protein catabolic process","type":"narrow"},{"name":"inhibition of lysosomal protein catabolism","type":"narrow"},{"name":"inhibition of lysosomal protein degradation","type":"narrow"},{"name":"inhibition of lysosomal proteolysis","type":"related"},{"name":"inhibition of proteolysis within lysosome","type":"related"},{"name":"negative regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"negative regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"negative regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"negative regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"negative regulation of lysosomal protein catabolism","type":"exact"},{"name":"negative regulation of lysosomal protein degradation","type":"exact"},{"name":"negative regulation of lysosomal proteolysis","type":"related"},{"name":"negative regulation of proteolysis within lysosome","type":"related"}],"termid":"GO:1905166"}


id: GO:1904171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bleb assembly.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:25651887","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"negatively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bleb assembly","synonyms":[{"name":"down regulation of bleb assembly","type":"exact"},{"name":"down regulation of cell blebbing","type":"exact"},{"name":"down-regulation of bleb assembly","type":"exact"},{"name":"down-regulation of cell blebbing","type":"exact"},{"name":"downregulation of bleb assembly","type":"exact"},{"name":"downregulation of cell blebbing","type":"exact"},{"name":"inhibition of bleb assembly","type":"narrow"},{"name":"inhibition of cell blebbing","type":"narrow"},{"name":"negative regulation of cell blebbing","type":"exact"}],"termid":"GO:1904171"}


id: PBO:0028634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_aculeacin_A","termid":"PBO:0028634"}


id: GO:0051675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pullulan to isopanose (6-alpha-maltosylglucose).","definition_xrefs":["EC:3.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isopullulanase activity","secondary_identifiers":["MetaCyc:3.2.1.57-RXN"],"synonyms":[{"name":"pullulan 4-glucanohydrolase (isopanose-forming) activity","type":"exact"}],"termid":"GO:0051675"}


id: PBO:0060890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NETO1 divergent transcript","termid":"PBO:0060890"}


id: PBO:0048007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 1","termid":"PBO:0048007"}


id: GO:0004595
data:
  {"annotated_genes":["SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88406],"is_not":false,"summary":null,"term":"GO:0004595"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pantetheine 4'-phosphate = 3'-dephospho-CoA + diphosphate.","definition_xrefs":["EC:2.7.7.3","RHEA:19801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"pantetheine-phosphate adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03035","Reactome:R-HSA-196754","MetaCyc:PANTEPADENYLYLTRAN-RXN"],"synonyms":[{"name":"3'-dephospho-CoA pyrophosphorylase activity","type":"related"},{"name":"ATP:pantetheine-4'-phosphate adenylyltransferase activity","type":"related"},{"name":"ATP:pantetheine-phosphate adenylyltransferase activity","type":"exact"},{"name":"PPAT activity","type":"related"},{"name":"dephospho-CoA diphosphorylase activity","type":"related"},{"name":"dephospho-CoA pyrophosphorylase activity","type":"related"},{"name":"dephospho-coenzyme A pyrophosphorylase activity","type":"related"},{"name":"pantetheine phosphate adenylyltransferase activity","type":"related"},{"name":"phosphopantetheine adenylyltransferase activity","type":"exact"}],"termid":"GO:0004595","terms_by_termid":{"GO:0004595":null}}


id: GO:0015754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-allose is transported across a lipid bilayer, from one side of a membrane to the other. Allose is an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"D-allose transmembrane transport","synonyms":[{"name":"allose transmembrane transport","type":"narrow"},{"name":"allose transport","type":"related"}],"termid":"GO:0015754"}


id: PBO:0076321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptoporin","termid":"PBO:0076321"}


id: PBO:0057294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 512-1","termid":"PBO:0057294"}


id: GO:0097396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-17 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-17","synonyms":[{"name":"response to IL-17","type":"exact"}],"termid":"GO:0097396"}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["PMID:20711475","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: GO:0009735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytokinin","synonyms":[{"name":"response to cytokinin stimulus","type":"exact"}],"termid":"GO:0009735"}


id: PBO:0053230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing G protein-coupled receptor 6","termid":"PBO:0053230"}


id: GO:2000269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast apoptotic process.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"fibroblast apoptotic process","termid":"GO:0044346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast apoptotic process","synonyms":[{"name":"regulation of fibroblast apoptosis","type":"narrow"}],"termid":"GO:2000269"}


id: PBO:0048354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 65","termid":"PBO:0048354"}


id: PBO:0084361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Linker nucleoporin component of the nuclear pore complex (NPC); also part of the NPC cytoplasmic filaments; contributes to nucleocytoplasmic transport and NPC biogenesis; forms stable associations with three FG-nucleoporins (Nsp1p, Nup159p, and Nup116p); relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084361"}


id: GO:0106054
data:
  {"annotated_genes":["SJAG_01302","SJAG_03932","SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90447,102027,104596],"is_not":false,"summary":null,"term":"GO:0106054"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine34 in tRNA + a [TusE sulfur carrier protein]-S-sulfanylcysteine + ATP + a reduced electron acceptor = a 2-thiouridine34 in tRNA + a [TusE sulfur carrier protein]-L-cysteine + AMP + an oxidized electron acceptor + diphosphate + H+.","definition_xrefs":["PMID:16387657","PMID:12549933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0140098","GO:0140101","GO:0016782"],"is_obsolete":false,"name":"tRNA-uracil-34 sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA U34 2-thiouridylase","type":"exact"},{"name":"tRNA U34 thiol-transferase activity","type":"exact"},{"name":"tRNA-specific 2-thiouridylase","type":"related"}],"termid":"GO:0106054","terms_by_termid":{"GO:0106054":null}}


id: PBO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3-phosphatase, myotubularin family","termid":"PBO:0090042"}


id: GO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A RNA polymerase I-specific transcription factor complex that contains the TATA-box-binding protein (TBP) and at least three TBP-associated factors including proteins known in mammals as TAFI110, TAFI63 and TAFI48.","definition_xrefs":["PMID:15691654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulator complex","termid":"GO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"RNA polymerase transcription factor SL1 complex","synonyms":[{"name":"TIF-IB","type":"exact"},{"name":"selectivity factor SL1 complex","type":"exact"}],"termid":"GO:0005668"}


id: PBO:0066575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras homolog, mTORC1 binding","termid":"PBO:0066575"}


id: PR:O14450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01436","PRO:DNx","PANTHER:PTHR21431:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.13","secondary_identifiers":["UniProtKB:O14450"],"synonyms":[{"name":"Spom972h-PFDN6","type":"exact"}],"termid":"PR:O14450"}


id: GO:1901118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephamycin C.","definition_xrefs":["UniPathway:UPA00183","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"cephamycin C biosynthetic process","synonyms":[{"name":"cephamycin C anabolism","type":"exact"},{"name":"cephamycin C biosynthesis","type":"exact"},{"name":"cephamycin C formation","type":"exact"},{"name":"cephamycin C synthesis","type":"exact"}],"termid":"GO:1901118"}


id: PBO:0086464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; may interact with ribosomes, based on co-purification experiments; predicted to be involved in ribosome biogenesis; null mutant is resistant to fluconazole; GFP-fusion protein localizes to the nucleolus; YGR283C has a paralog, YMR310C, that arose from the whole genome duplication","termid":"PBO:0086464"}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: FYPO:0001905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number, structure, and orientation of microtubules in the mitotic spindle are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle microtubules","synonyms":[{"name":"normal mitotic spindle microtubules during vegetative growth","type":"exact"},{"name":"normal spindle microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001905"}


id: PBO:0087093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L8A; required for processing of 27SA3 pre-rRNA to 27SB during assembly of large subunit; binds Domain I of 25S, 5.8 S rRNAs; mutation results in decreased amounts of free 60S subunits; RPL8B has paralog RPL8A from whole genome duplication; RPL8A or RPL8B ribosomes not functionally interchangeable; proportions of Rpl8ap, Rpl8bp in 80S ribosome differ in glucose and glycerol; homologous to mammalian ribosomal protein L7A, no bacterial homolog","termid":"PBO:0087093"}


id: FYPO:0005840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that does not have uniform thickness and does not extend over the entire cell division site.","definition_xrefs":["PMID:26877082","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"incomplete, asymmetric septum","synonyms":[{"name":"discontinuous, asymmetric secondary septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum","type":"exact"},{"name":"incomplete, asymmetric secondary cell septum during mitotic cell cycle","type":"related"},{"name":"incomplete, asymmetric secondary cell septum during vegetative growth","type":"exact"},{"name":"incomplete, asymmetric secondary septum","type":"exact"}],"termid":"FYPO:0005840"}


id: PBO:0071967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A6","termid":"PBO:0071967"}


id: PBO:0084738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms complex with Ups2p that transfers phosphatidylserine from outer membrane to inner membrane for phosphatidylethanolamine synthesis; mutation affects mitochondrial distribution and morphology; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress","termid":"PBO:0084738"}


id: PBO:0087493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA primase; DNA primase is required for DNA synthesis and double-strand break repair","termid":"PBO:0087493"}


id: GO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"regulation of protein refolding","termid":"GO:0061083"}


id: PBO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 2","termid":"PBO:0046002"}


id: PBO:0001466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconokinase","termid":"PBO:0001466"}


id: PBO:0056779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member A","termid":"PBO:0056779"}


id: FYPO:0000639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly begins later than normal.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000032","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of septum assembly","synonyms":[{"name":"delayed onset of division septum assembly","type":"exact"},{"name":"delayed onset of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"delayed onset of septation","type":"broad"},{"name":"delayed onset of septum assembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of septum assembly during vegetative growth","type":"exact"},{"name":"delayed onset of septum formation","type":"exact"},{"name":"delayed septum assembly","type":"exact"}],"termid":"FYPO:0000639"}


id: GO:2000862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"negatively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen secretion","synonyms":[{"name":"negative regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000862"}


id: GO:0046108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"uridine metabolic process","synonyms":[{"name":"uridine metabolism","type":"exact"}],"termid":"GO:0046108"}


id: GO:0032529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus on a follicle cell. A microvillus is a thin cylindrical membrane-covered projection on the surface of an animal cell containing a core bundle of actin filaments.","definition_xrefs":["PMID:16507588","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus organization","termid":"GO:0032528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell microvillus organization","synonyms":[{"name":"follicle cell microvillus organisation","type":"exact"},{"name":"follicle cell microvillus organization and biogenesis","type":"related"}],"termid":"GO:0032529"}


id: _global:participates_in_a_biotic-biotic_interaction_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"biotically_interacts_with","termid":"_global:biotically_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in_a_biotic-biotic_interaction_with","secondary_identifiers":["RO:0002574"],"termid":"_global:participates_in_a_biotic-biotic_interaction_with"}


id: FYPO:0002604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002604"}


id: MOD:00771
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115545,115544,115546,115543,115699,115698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 166.98-167.00 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 166.98-167.00 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"termid":"MOD:00771","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area in which the heart will develop.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart field specification","termid":"GO:0003128"}


id: SO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting two bases forward.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_frameshift_variant","synonyms":[{"name":"-2 frameshift variant","type":"exact"},{"name":"minus 2 frameshift variant","type":"exact"}],"termid":"SO:0001593"}


id: PBO:0029553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_ethyl_methanesulfonate","termid":"PBO:0029553"}


id: PBO:0069298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 554, pseudogene","termid":"PBO:0069298"}


id: FYPO:0004446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of endocytosis is decreased during the meiotic cell cycle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased endocytosis during meiotic cell cycle","synonyms":[{"name":"reduced actin-mediated endocytosis during meiotic cell cycle","type":"exact"},{"name":"reduced endocytosis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004446"}


id: GO:2000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of opioid receptor signaling pathway","synonyms":[{"name":"regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000474"}


id: PBO:0048085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 6","termid":"PBO:0048085"}


id: GO:0006518
data:
  {"annotated_genes":["SJAG_01004","SJAG_01750","SJAG_00469","SJAG_02867","SJAG_00988","SJAG_04032","SJAG_00792","SJAG_04583","SJAG_02599","SJAG_04031","SJAG_03494","SJAG_03737","SJAG_02809","SJAG_00181","SJAG_01351","SJAG_01088","SJAG_03121","SJAG_01430","SJAG_03261","SJAG_01179","SJAG_03648"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88488],"is_not":false,"summary":null,"term":"GO:0006518"},{"annotations":[90282],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043041"},{"annotations":[90284,90292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[89484,104613,93195,114298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[90249],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[97209,101922,110620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043171"},{"annotations":[101561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"},{"annotations":[99994,99251,107176,83883,104257,105379,108741,90896,94597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006465"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01179":null,"SJAG_01351":null,"SJAG_01430":null,"SJAG_01750":null,"SJAG_02599":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03494":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide metabolism","type":"exact"}],"termid":"GO:0006518","terms_by_termid":{"GO:0006465":null,"GO:0006518":null,"GO:0006750":null,"GO:0019290":null,"GO:0031169":null,"GO:0043041":null,"GO:0043171":null,"GO:1905569":null}}


id: FYPO:0003418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which malate dehydrogenase (decarboxylating) (NAD+) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","termid":"FYPO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abolished 'malic' enzyme activity","type":"related"},{"name":"abolished (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abolished NAD-linked malic enzyme activity","type":"related"},{"name":"abolished NAD-malic enzyme activity","type":"broad"},{"name":"abolished NAD-specific malic enzyme activity","type":"related"},{"name":"abolished malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"malate dehydrogenase (decarboxylating) (NAD+) activity abolished","type":"exact"}],"termid":"FYPO:0003418"}


id: PBO:0087407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; polyubiquitin binding protein that assists in the dislocation of misfolded, ERAD substrates that are subsequently delivered to the proteasome for degradation; involved in regulated destruction of ER membrane proteins such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); involved in mobilizing membrane bound transcription factors by regulated Ub/proteasome-dependent processing (RUP)","termid":"PBO:0087407"}


id: PBO:0091873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pho84 repressing sense RNA Prt2","termid":"PBO:0091873"}


id: GO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIa cytochrome c (obsolete GO:0009470)","synonyms":[{"name":"class IIa cytochrome c","type":"exact"}],"termid":"GO:0009470"}


id: GO:0044379
data:
  {"annotated_genes":["SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103337],"is_not":false,"summary":null,"term":"GO:0044379"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, an actin cortical patch.","definition_xrefs":["GOC:mah","PMID:21620704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin cortical patch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:0044379","terms_by_termid":{"GO:0044379":null}}


id: PBO:0063439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6B","termid":"PBO:0063439"}


id: PBO:0016581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase gamma","termid":"PBO:0016581"}


id: PBO:0088100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uracil phosphoribosyltransferase; synthesizes UMP from uracil; involved in the pyrimidine salvage pathway","termid":"PBO:0088100"}


id: FYPO:0005459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via nonhomologous end joining (NHEJ) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-strand break repair","termid":"FYPO:0005436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abolished double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abolished double-strand break repair via NHEJ","type":"exact"},{"name":"abolished double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"double-strand break repair via nonhomologous end joining abolished","type":"exact"}],"termid":"FYPO:0005459"}


id: PBO:0026748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_mitotic_S_phase","termid":"PBO:0026748"}


id: PBO:0058808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7850","termid":"PBO:0058808"}


id: GO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium maturation (obsolete GO:0075038)","synonyms":[{"name":"negative regulation of appressorium maturation on or near host","type":"related"},{"name":"negative regulation of maturation of appressorium on or near host","type":"exact"}],"termid":"GO:0075038"}


id: PR:O94707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt3 gene.","definition_xrefs":["UniProtKB:O94707","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.07","synonyms":[{"name":"Spom972h-rxt3","type":"exact"}],"termid":"PR:O94707"}


id: PBO:0041322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 74","termid":"PBO:0041322"}


id: PATO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased number of physical objects that are accumulated within another physical object usually as a result of a failure to break down or remove objects in a timely manner.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased accumulation","synonyms":[{"name":"accumulated","type":"exact"}],"termid":"PATO:0002270"}


id: PBO:0054856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2270","termid":"PBO:0054856"}


id: GO:0103031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanyl-D-glutamate = L-alanyl-L-glutamate.","definition_xrefs":["GOC:pz","EC:5.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-Ala-D/L-Glu epimerase activity","secondary_identifiers":["RHEA:28394","MetaCyc:RXN0-5228"],"termid":"GO:0103031"}


id: GO:1904639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a resveratrol stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:23555824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to resveratrol","termid":"GO:1904638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to resveratrol","termid":"GO:1904639"}


id: FYPO:0000960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethanol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on ethanol","synonyms":[{"name":"normal cell population growth in presence of ethanol","type":"exact"},{"name":"normal cell population growth on ethanol","type":"exact"},{"name":"normal cell population growth on to ethyl alcohol","type":"exact"},{"name":"normal cellular response to ethanol","type":"related"},{"name":"normal vegetative cell population growth on ethanol","type":"exact"}],"termid":"FYPO:0000960"}


id: PBO:0043026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2A","termid":"PBO:0043026"}


id: PATO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000656 time_quantity (obsolete PATO:0000656)","termid":"PATO:0000656"}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: PBO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.23","termid":"PBO:0002105"}


id: PBO:0041270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 2","termid":"PBO:0041270"}


id: PBO:0076528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 41","termid":"PBO:0076528"}


id: FYPO:0002683
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[115542,115554,115283,115598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000097"},{"annotations":[115287,115462,115456,115463,115289,115455,115288,115461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000085"},{"annotations":[115504,115519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000079"},{"annotations":[115282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115458,115452,115459,115460,115453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000088"},{"annotations":[115375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000106"},{"annotations":[115499,115641,115498,115642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000107"},{"annotations":[115357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000714"},{"annotations":[115284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001214"},{"annotations":[115555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000841"},{"annotations":[115514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007522"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show decreased resistance to a chemical stimulus. 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crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01205","SJAG_01680"],"name":"increased sensitivity to chemical","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:27678009":null,"PMID:31150379":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00429","SJAG_04312","SJAG_00364","SJAG_04671","SJAG_00610","SJAG_04697","SJAG_01680","SJAG_02527","SJAG_04551","SJAG_05207","SJAG_01205","SJAG_01605","SJAG_01787","SJAG_00266","SJAG_04287","SJAG_01410"],"single_locus_genotype_uniquenames":["mrc1delta","atf1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","sty1delta","gms1delta","pck1delta","cmp7delta","cds1delta","rad26delta","pka1delta","crb2delta","rad3delta","pck2delta","pmk1delta","chk1delta","rad51delta","rad9delta"],"synonyms":[{"name":"resistance to chemicals: decreased","type":"related"},{"name":"sensitive to chemical","type":"exact"}],"termid":"FYPO:0002683","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000079":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000714":null,"FYPO:0000841":null,"FYPO:0001214":null,"FYPO:0007522":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inferred from genetic map position","termid":"PBO:0000912"}


id: PBO:0109638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1C, member RAS oncogene family (pseudogene)","termid":"PBO:0109638"}


id: GO:1901392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta1 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta1 activation (obsolete GO:1901392)","synonyms":[{"name":"regulation of L-TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGF-beta 1 activation","type":"exact"},{"name":"regulation of TGFB1 activation","type":"exact"},{"name":"regulation of TGFbeta 1 activation","type":"exact"},{"name":"regulation of latent-TGF-beta1 activation","type":"exact"},{"name":"regulation of transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:1901392"}


id: PBO:0063007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 1","termid":"PBO:0063007"}


id: PBO:0088978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family plus-end directed microtubule motor Klp5","termid":"PBO:0088978"}


id: PBO:0011461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit A/ SAGA complex subunit Taf12","termid":"PBO:0011461"}


id: PR:P40903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative subtilase-type proteinase isp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.04","synonyms":[{"name":"Spom972h-isp6","type":"exact"}],"termid":"PR:P40903"}


id: PBO:0056891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MID1IP1 antisense RNA 1","termid":"PBO:0056891"}


id: PBO:0052376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20A","termid":"PBO:0052376"}


id: MOD:00850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an unnatural residue that is not considered to be derived from a natural residue by some chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnatural residue","termid":"MOD:00850"}


id: PBO:0054437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1833","termid":"PBO:0054437"}


id: PBO:0058950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKKS centrosomal shuttling protein","termid":"PBO:0058950"}


id: GO:0036276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antidepressant stimulus, a mood-stimulating drug.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antidepressant","termid":"GO:0036276"}


id: GO:0090143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleoid. The nucleoid is the region of a bacterial cell, virion, mitochondrion or chloroplast to which the DNA is confined.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleoid organization","synonyms":[{"name":"nucleoid organisation","type":"exact"}],"termid":"GO:0090143"}


id: GO:0033306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phytol metabolic process","synonyms":[{"name":"phytol metabolism","type":"exact"}],"termid":"GO:0033306"}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: PBO:0042534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 1","termid":"PBO:0042534"}


id: PBO:0059428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin related transcription factor B","termid":"PBO:0059428"}


id: PBO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (predicted)","termid":"PBO:0002196"}


id: GO:1901076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GO:kmv","GOC:TermGenie","PMID:19402756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic cell clearance","termid":"GO:2000427"},{"relation_name":"positively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of engulfment of apoptotic cell","synonyms":[{"name":"activation of engulfment of apoptotic cell","type":"narrow"},{"name":"activation of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"activation of engulfment of cell corpse","type":"narrow"},{"name":"positive regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"positive regulation of engulfment of cell corpse","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up regulation of engulfment of cell corpse","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up-regulation of engulfment of cell corpse","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"upregulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901076"}


id: PBO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Pst2","termid":"PBO:0001381"}


id: GO:0018153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an isopeptide cross-link between peptidyl-lysine and peptidyl-glutamine to produce N6-(L-isoglutamyl)-L-lysine.","definition_xrefs":["RESID:AA0124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"isopeptide cross-linking","termid":"GO:0018262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine","termid":"GO:0018153"}


id: GO:0032061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to osmotic stress","synonyms":[{"name":"down regulation of translation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032061"}


id: PBO:0068215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 522","termid":"PBO:0068215"}


id: PBO:0078290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 23-1","termid":"PBO:0078290"}


id: GO:0032010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by maturation of an early phagosome following the ingestion of particulate material by phagocytosis; during maturation, phagosomes acquire markers of late endosomes and lysosomes.","definition_xrefs":["GOC:mah","PMID:12388753","PMID:14733906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary lysosome","termid":"GO:0005767"},{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"phagolysosome","secondary_identifiers":["Wikipedia:Phagolysosome"],"synonyms":[{"name":"late phagocytic vesicle","type":"related"},{"name":"late phagosome","type":"related"}],"termid":"GO:0032010"}


id: PBO:0046577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 19, envelope","termid":"PBO:0046577"}


id: FYPO:0008200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}


id: FYPO:0001159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular pH","synonyms":[{"name":"increased cellular pH during mitotic cell cycle","type":"related"},{"name":"increased cellular pH during vegetative growth","type":"exact"},{"name":"increased cellular pH level","type":"exact"}],"termid":"FYPO:0001159"}


id: GO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O2 + H+ + palmitate = CO2 + 3 H2O + pentadecanal.","definition_xrefs":["EC:1.11.1.3","RHEA:23960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fatty acid peroxidase activity","secondary_identifiers":["KEGG_REACTION:R01703","MetaCyc:FATTY-ACID-PEROXIDASE-RXN"],"synonyms":[{"name":"fatty-acid peroxidase activity","type":"exact"},{"name":"hexadecanoate:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"long chain fatty acid peroxidase activity","type":"related"}],"termid":"GO:0047888"}


id: PBO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 35","termid":"PBO:0080071"}


id: PBO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 fusion partner 1","termid":"PBO:0045034"}


id: GO:0005484
data:
  {"annotated_genes":["SJAG_01324","SJAG_04023","SJAG_02586","SJAG_04701","SJAG_04978","SJAG_02103","SJAG_00899","SJAG_00171","SJAG_03536","SJAG_02241","SJAG_04513","SJAG_03347","SJAG_02204","SJAG_00826","SJAG_03552","SJAG_00804","SJAG_03848","SJAG_04739","SJAG_00557"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86775,89824,90079,92475,94279,95679,96062,96378,97250,99314,103567,104210,104870,105850,106000,108867,113691,114665,114751],"is_not":false,"summary":null,"term":"GO:0005484"}]},"cv_name":"molecular_function","definition":"Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.","definition_xrefs":["PMID:14570579","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00557":null,"SJAG_00804":null,"SJAG_00826":null,"SJAG_00899":null,"SJAG_01324":null,"SJAG_02103":null,"SJAG_02204":null,"SJAG_02241":null,"SJAG_02586":null,"SJAG_03347":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04701":null,"SJAG_04739":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"SNAP receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005486","GO:0005485"],"synonyms":[{"name":"Q-SNARE activity","type":"narrow"},{"name":"R-SNARE activity","type":"narrow"},{"name":"SNAP-25","type":"narrow"},{"name":"SNARE","type":"exact"},{"name":"t-SNARE activity","type":"narrow"},{"name":"v-SNARE activity","type":"narrow"}],"termid":"GO:0005484","terms_by_termid":{"GO:0005484":null}}


id: PBO:0086504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein; in the Sigma 1278B strain background YLL053C is contiguous with AQY2 which encodes an aquaporin","termid":"PBO:0086504"}


id: GO:0015142
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylic acids from one side of a membrane to the other. Tricarboxylic acid are organic acids with three COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"tricarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75849","Reactome:R-HSA-372449"],"synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0015142","terms_by_termid":{"GO:0071913":null}}


id: PBO:0039908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF7 intronic transcript 1","termid":"PBO:0039908"}


id: GO:0140632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inflammasome complex.","definition_xrefs":["PMID:33420033","PMID:33542150","PMID:33420028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0023052","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"canonical inflammasome complex assembly","termid":"GO:0140632"}


id: GO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NADP+ = CO2 + NADPH + succinyl-CoA.","definition_xrefs":["RHEA:21400","EC:1.2.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00265","MetaCyc:OXOGLUTARATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"2-oxoglutarate:NADP+ 2-oxidoreductase (CoA-succinylating)","type":"related"}],"termid":"GO:0050164"}


id: GO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of a metal into a metallo-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}


id: PBO:0089134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"client-loading PAQosome cofactor","termid":"PBO:0089134"}


id: PBO:0060187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC5B antisense RNA 1","termid":"PBO:0060187"}


id: GO:1904963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phytol biosynthetic process.","definition_xrefs":["PMID:24275650","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"phytol biosynthetic process","termid":"GO:0033520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of phytol biosynthetic process","synonyms":[{"name":"regulation of phytol anabolism","type":"exact"},{"name":"regulation of phytol biosynthesis","type":"exact"},{"name":"regulation of phytol formation","type":"exact"},{"name":"regulation of phytol synthesis","type":"exact"}],"termid":"GO:1904963"}


id: PR:O74458
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor 3C polypeptide 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04416","PRO:DNx","PANTHER:PTHR23082:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.14c","secondary_identifiers":["UniProtKB:O74458"],"synonyms":[{"name":"Spom972h-GTF3C3","type":"exact"},{"name":"TFIIIC subunit sfc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74458"}


id: PBO:0090689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Cut15","termid":"PBO:0090689"}


id: GO:0010189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin E metabolic process","termid":"GO:0042360"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin E biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1422"],"synonyms":[{"name":"alpha-tocopherol biosynthesis","type":"narrow"},{"name":"alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"tocopherol biosynthesis","type":"exact"},{"name":"tocopherol biosynthetic process","type":"exact"},{"name":"vitamin E anabolism","type":"exact"},{"name":"vitamin E biosynthesis","type":"exact"},{"name":"vitamin E formation","type":"exact"},{"name":"vitamin E synthesis","type":"exact"}],"termid":"GO:0010189"}


id: SO:0001462
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of contigs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"contig","termid":"SO:0000149"},{"relation_name":"is_a","term_name":"sequence_conflict","termid":"SO:0001085"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contig_collection","synonyms":[{"name":"contig collection","type":"exact"}],"termid":"SO:0001462"}


id: PR:Q10207
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D1.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.01","synonyms":[{"name":"Spom972h-SPBC17D1.01","type":"exact"}],"termid":"PR:Q10207"}


id: GO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukin-2 receptor.","definition_xrefs":["PMID:10358772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"interleukin-4 receptor complex","synonyms":[{"name":"IL-4 receptor complex","type":"exact"}],"termid":"GO:0016516"}


id: GO:0048501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of a protein and RNA component which binds the signal sequence of some proteins and facilitates their export to or across the plasma membrane.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal recognition particle","termid":"GO:0048500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle, plasma membrane targeting","termid":"GO:0048501"}


id: GO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-10 production","termid":"GO:0032653"},{"relation_name":"positively_regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-10 production","secondary_identifiers":["GO:2001181","GO:0045082"],"synonyms":[{"name":"activation of interleukin-10 production","type":"narrow"},{"name":"positive regulation of IL-10 production","type":"exact"},{"name":"positive regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-10 secretion","type":"narrow"},{"name":"stimulation of interleukin-10 production","type":"narrow"},{"name":"up regulation of interleukin-10 production","type":"exact"},{"name":"up-regulation of interleukin-10 production","type":"exact"},{"name":"upregulation of interleukin-10 production","type":"exact"}],"termid":"GO:0032733"}


id: GO:0015626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-diaminopimelate from one side of a membrane to the other. L-diaminopimelate is the L-enantiomer anion of 2,6-diaminoheptanedioic acid.","definition_xrefs":["GOC:go_curators","GOC:jsg","GOC:mah","GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-diaminopimelate transmembrane transporter activity","synonyms":[{"name":"L-diaminopimelate transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015626"}


id: PBO:0065964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 antisense RNA 1","termid":"PBO:0065964"}


id: GO:0031362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that are tethered to the external side of the membrane only by a covalently attached anchor, such as a lipid group embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of external side of plasma membrane (obsolete GO:0031362)","synonyms":[{"name":"anchored to external leaflet of plasma membrane","type":"exact"},{"name":"anchored to external side of plasma membrane","type":"exact"}],"termid":"GO:0031362"}


id: PBO:0041692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin receptor like receptor","termid":"PBO:0041692"}


id: PBO:0045825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 15","termid":"PBO:0045825"}


id: PBO:0075589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPINT1 antisense RNA 1","termid":"PBO:0075589"}


id: PBO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030902"}


id: GO:0033091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"positively_regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of immature T cell proliferation","termid":"GO:0033091"}


id: GO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"positively_regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis","synonyms":[{"name":"activation of chemotaxis","type":"narrow"},{"name":"stimulation of chemotaxis","type":"narrow"},{"name":"up regulation of chemotaxis","type":"exact"},{"name":"up-regulation of chemotaxis","type":"exact"},{"name":"upregulation of chemotaxis","type":"exact"}],"termid":"GO:0050921"}


id: SO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an asparagine anticodon, and a 3' asparagine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"asparagine_tRNA_primary_transcript","termid":"SO:0000213"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl_tRNA","synonyms":[{"name":"asparaginyl tRNA","type":"exact"},{"name":"asparaginyl-transfer RNA","type":"exact"},{"name":"asparaginyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000256"}


id: GO:0070833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with an initial N-methylation with phospho-base phosphoethanolamine, followed by two downstream N-methylations on phosphatidyl-bases, phosphatidyl-N-methylethanolamine and phosphatidyl-N-dimethylethanolamine. The process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via CDP-N-methylethanolamine","termid":"GO:0070833"}


id: PBO:0015218
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC14","termid":"PBO:0015218"}


id: PBO:0017472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ecologically_related_to","termid":"PBO:0017472"}


id: PBO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 3","termid":"PBO:0072274"}


id: PBO:0030429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_eisosome_filament","termid":"PBO:0030429"}


id: PBO:0036409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglutamate synthase Arg6","termid":"PBO:0036409"}


id: GO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tissue remodeling","synonyms":[{"name":"positive regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034105"}


id: GO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism interprets its surroundings.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron recognition","synonyms":[{"name":"neuronal cell recognition","type":"exact"}],"termid":"GO:0008038"}


id: GO:1900533
data:
  {"annotated_genes":["SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"palmitic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900533","terms_by_termid":{"GO:1900535":null}}


id: GO:1903187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:19467235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"negatively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vitellogenesis","synonyms":[{"name":"down regulation of vitellogenesis","type":"exact"},{"name":"down regulation of yolk production","type":"exact"},{"name":"down-regulation of vitellogenesis","type":"exact"},{"name":"down-regulation of yolk production","type":"exact"},{"name":"downregulation of vitellogenesis","type":"exact"},{"name":"downregulation of yolk production","type":"exact"},{"name":"inhibition of vitellogenesis","type":"narrow"},{"name":"inhibition of yolk production","type":"narrow"},{"name":"negative regulation of yolk production","type":"exact"}],"termid":"GO:1903187"}


id: PR:Q9P6J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1683.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.12","synonyms":[{"name":"Spom972h-SPBC1683.12","type":"exact"}],"termid":"PR:Q9P6J0"}


id: GO:2000001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"regulation of DNA damage checkpoint","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000001"}


id: SO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000117 transcript_with_readthrough_stop_codon (obsolete SO:0000117)","termid":"SO:0000117"}


id: PBO:0073157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit beta","termid":"PBO:0073157"}


id: GO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear retinoic acid receptor, a ligand-regulated transcription factor belonging to the nuclear receptor superfamily.","definition_xrefs":["PMID:12476796","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nuclear retinoic acid receptor binding","synonyms":[{"name":"RAR binding","type":"exact"},{"name":"retinoic acid receptor binding","type":"broad"}],"termid":"GO:0042974"}


id: PBO:0045322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 2","termid":"PBO:0045322"}


id: PBO:0049963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 9","termid":"PBO:0049963"}


id: PBO:0027490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation","termid":"PBO:0027490"}


id: GO:0018502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol + NAD+ = NADH + H+ + 2,5-dichlorohydroquinone.","definition_xrefs":["UM-BBD_reactionID:r0553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:LINC-RXN","RHEA:15741"],"termid":"GO:0018502"}


id: PBO:0072565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome binding protein 1","termid":"PBO:0072565"}


id: GO:0090520
data:
  {"annotated_genes":["SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101345],"is_not":false,"summary":null,"term":"GO:0090520"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by a sphingolipid.","definition_xrefs":["PMID:9525917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sphingolipid mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide 1-phosphate signaling pathway","type":"narrow"},{"name":"ceramide signaling pathway","type":"narrow"},{"name":"sphingolipid mediated signal transduction","type":"exact"},{"name":"sphingolipid signaling pathway","type":"related"},{"name":"sphingolipid-mediated signaling pathway","type":"exact"},{"name":"sphingosine signaling pathway","type":"narrow"}],"termid":"GO:0090520","terms_by_termid":{"GO:0090520":null}}


id: FYPO:0004174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h+ mating type.","definition_xrefs":["PomBase:mah","PMID:9003326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"h+ specific sterility","synonyms":[{"name":"h+-specific sterility","type":"exact"},{"name":"h-plus-specific mating defect","type":"related"},{"name":"h-plus-specific sterility","type":"exact"}],"termid":"FYPO:0004174"}


id: PBO:0003514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sfb3 (predicted)","termid":"PBO:0003514"}


id: PBO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 9","termid":"PBO:0071677"}


id: PBO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rhp51","termid":"PBO:0001681"}


id: PBO:0045346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 6","termid":"PBO:0045346"}


id: GO:0021847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proliferation of neuroblasts in the ventricular zone of the cerebral cortex. The neuronal progenitors of these cells will migrate radially.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain ventricular zone progenitor cell division","termid":"GO:0021869"},{"relation_name":"is_a","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular zone neuroblast division","synonyms":[{"name":"neuroblast division in ventricular zone","type":"exact"}],"termid":"GO:0021847"}


id: GO:0102800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3,5-di-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-(6-O-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"caffeoyl-CoA:pelargonidin-3,5-diglucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8138"],"termid":"GO:0102800"}


id: PBO:0017551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Tax4(predicted)","termid":"PBO:0017551"}


id: PBO:0063339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 4","termid":"PBO:0063339"}


id: PBO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 21","termid":"PBO:0042160"}


id: GO:0120092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Acetyl-CoA + [protein]-L-lysine = CoA + [protein]-N(6)-acetyl-L-lysine.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"crotonyl-CoA hydratase activity","secondary_identifiers":["RHEA:45584"],"termid":"GO:0120092"}


id: GO:0099606
data:
  {"annotated_genes":["SJAG_04745","SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90947,106095],"is_not":false,"summary":null,"term":"GO:0099606"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules. This process is part of mitotic metaphase plate congression.","definition_xrefs":["PMID:26258632","PMID:26705896","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04745":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"microtubule plus-end directed mitotic chromosome migration","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"plus-end directed chromosome gliding","type":"exact"}],"termid":"GO:0099606","terms_by_termid":{"GO:0099606":null}}


id: FYPO:0002257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuolar morphology","synonyms":[{"name":"abnormal vacuole morphology","type":"exact"},{"name":"vacuolar morphology: abnormal","type":"related"}],"termid":"FYPO:0002257"}


id: GO:0034354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["PMID:17161604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"'de novo' NAD biosynthetic process","termid":"GO:0034627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:0034354"}


id: GO:0035361
data:
  {"annotated_genes":["SJAG_04971","SJAG_02837","SJAG_04142","SJAG_03728"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78370,93668,95536,107391],"is_not":false,"summary":null,"term":"GO:0035361"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul8 subfamily and a RING domain protein form the catalytic core. In S. cerevisiae, Mms1p acts as the adaptor protein and substrate specificity is conferred by any of a number of different proteins.","definition_xrefs":["GOC:krc","PMID:20139071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02837":null,"SJAG_03728":null,"SJAG_04142":null,"SJAG_04971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0035361","terms_by_termid":{"GO:0035361":null}}


id: PBO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methytransferase (predicted)","termid":"PBO:0005145"}


id: PBO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic Rho guanine nucleotide exchange factor","termid":"PBO:0090236"}


id: GO:0018387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of N-terminal peptidyl-cysteine, or peptidyl-serine, to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-amino acid deamination to pyruvic acid","termid":"GO:0018387"}


id: GO:0019716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The monomethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N-methyl-L-alanine.","definition_xrefs":["RESID:AA0061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine monomethylation","termid":"GO:0019716"}


id: GO:0072352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tricarboxylic acid catabolic process","synonyms":[{"name":"tricarboxylate catabolic process","type":"exact"},{"name":"tricarboxylate catabolism","type":"exact"},{"name":"tricarboxylic acid breakdown","type":"exact"},{"name":"tricarboxylic acid catabolism","type":"exact"},{"name":"tricarboxylic acid degradation","type":"exact"}],"termid":"GO:0072352"}


id: GO:1903361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, basolateral regions of the plasma membrane.","definition_xrefs":["PMID:9425351","GOC:TermGenie","PMID:24785082","GO_REF:0000087","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to basolateral plasma membrane","secondary_identifiers":["GO:0061467"],"synonyms":[{"name":"basolateral protein localization","type":"exact"},{"name":"protein localisation in basolateral plasma membrane","type":"exact"},{"name":"protein localisation to basolateral plasma membrane","type":"exact"},{"name":"protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1903361"}


id: PBO:0041981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 25","termid":"PBO:0041981"}


id: GO:0097373
data:
  {"annotated_genes":["SJAG_00884","SJAG_04210","SJAG_00857"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102586,103418,111435],"is_not":false,"summary":null,"term":"GO:0097373"}]},"cv_name":"cellular_component","definition":"A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.","definition_xrefs":["PMID:10770926","GOC:mah","PMID:15007098","PMID:9305914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MCM core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MCM4/6/7 complex","type":"exact"}],"termid":"GO:0097373","terms_by_termid":{"GO:0097373":null}}


id: PBO:0086784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086784"}


id: PR:000044798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 42 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 42 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC110.03","synonyms":[{"name":"SPAC110.03","type":"related"},{"name":"Spom-cdc2","type":"exact"}],"termid":"PR:000044798"}


id: MOD:01468
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide) (not known as a natural, post-translational modification process).","definition_xrefs":["Unimod:415","PubMed:2211698","PubMed:14235557","PubMed:8052647","PubMed:9036855","RESID:AA0248#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-selenocysteine residue","termid":"MOD:02073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide) (Cys)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD+Delta:S(-1)Se(1)","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-selenocysteinyl-Se-molybdenum","type":"exact"},{"name":"formate dehydrogenase selenocysteine molybdenum cofactor","type":"exact"},{"name":"molybdopterin-se","type":"related"}],"termid":"MOD:01468"}


id: GO:0046693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The retention of sperm by a female following mating.","definition_xrefs":["PMID:10885514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm storage","synonyms":[{"name":"retention of sperm","type":"exact"},{"name":"sequestering of sperm","type":"exact"},{"name":"sequestration of sperm","type":"exact"},{"name":"sperm retention","type":"exact"},{"name":"sperm sequestering","type":"exact"},{"name":"sperm sequestration","type":"exact"},{"name":"storage of sperm","type":"exact"}],"termid":"GO:0046693"}


id: PBO:0077340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 79","termid":"PBO:0077340"}


id: PBO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 56","termid":"PBO:0070685"}


id: GO:1905149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle hypertrophy.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","GOC:bc","PMID:22161164","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle hypertrophy","termid":"GO:0014742"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"is_a","term_name":"regulation of smooth muscle hypertrophy","termid":"GO:1905147"},{"relation_name":"positively_regulates","term_name":"smooth muscle hypertrophy","termid":"GO:0014895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle hypertrophy","synonyms":[{"name":"activation of smooth muscle hypertrophy","type":"narrow"},{"name":"up regulation of smooth muscle hypertrophy","type":"exact"},{"name":"up-regulation of smooth muscle hypertrophy","type":"exact"},{"name":"upregulation of smooth muscle hypertrophy","type":"exact"}],"termid":"GO:1905149"}


id: PBO:0110972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K9 methyltransferase (Suv39) Clr4","termid":"PBO:0110972"}


id: PBO:0065448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 5","termid":"PBO:0065448"}


id: GO:1904521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myofibroblast cell apoptotic process.","definition_xrefs":["PMID:26119034","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of myofibroblast cell apoptotic process","termid":"GO:1904520"},{"relation_name":"negatively_regulates","term_name":"myofibroblast cell apoptotic process","termid":"GO:1904516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myofibroblast cell apoptotic process","synonyms":[{"name":"down regulation of MFB apoptosis","type":"narrow"},{"name":"down regulation of MFB apoptotic process","type":"exact"},{"name":"down regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"down regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"down-regulation of MFB apoptosis","type":"narrow"},{"name":"down-regulation of MFB apoptotic process","type":"exact"},{"name":"down-regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"down-regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"downregulation of MFB apoptosis","type":"narrow"},{"name":"downregulation of MFB apoptotic process","type":"exact"},{"name":"downregulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"downregulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"inhibition of MFB apoptosis","type":"narrow"},{"name":"inhibition of MFB apoptotic process","type":"narrow"},{"name":"inhibition of myofibroblast cell apoptosis","type":"narrow"},{"name":"inhibition of myofibroblast cell apoptotic process","type":"narrow"},{"name":"negative regulation of MFB apoptosis","type":"narrow"},{"name":"negative regulation of MFB apoptotic process","type":"exact"},{"name":"negative regulation of myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904521"}


