# terms

id: GO:1903250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of citrulline biosynthetic process.","definition_xrefs":["GOC:BHF","GO_REF:0000058","PMID:19278978","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of citrulline biosynthetic process","termid":"GO:1903248"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"citrulline biosynthetic process","termid":"GO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of citrulline biosynthetic process","synonyms":[{"name":"activation of citrulline anabolism","type":"narrow"},{"name":"activation of citrulline biosynthesis","type":"narrow"},{"name":"activation of citrulline biosynthetic process","type":"narrow"},{"name":"activation of citrulline formation","type":"narrow"},{"name":"activation of citrulline synthesis","type":"narrow"},{"name":"positive regulation of citrulline anabolism","type":"exact"},{"name":"positive regulation of citrulline biosynthesis","type":"exact"},{"name":"positive regulation of citrulline formation","type":"exact"},{"name":"positive regulation of citrulline synthesis","type":"exact"},{"name":"up regulation of citrulline anabolism","type":"exact"},{"name":"up regulation of citrulline biosynthesis","type":"exact"},{"name":"up regulation of citrulline biosynthetic process","type":"exact"},{"name":"up regulation of citrulline formation","type":"exact"},{"name":"up regulation of citrulline synthesis","type":"exact"},{"name":"up-regulation of citrulline anabolism","type":"exact"},{"name":"up-regulation of citrulline biosynthesis","type":"exact"},{"name":"up-regulation of citrulline biosynthetic process","type":"exact"},{"name":"up-regulation of citrulline formation","type":"exact"},{"name":"up-regulation of citrulline synthesis","type":"exact"},{"name":"upregulation of citrulline anabolism","type":"exact"},{"name":"upregulation of citrulline biosynthesis","type":"exact"},{"name":"upregulation of citrulline biosynthetic process","type":"exact"},{"name":"upregulation of citrulline formation","type":"exact"},{"name":"upregulation of citrulline synthesis","type":"exact"}],"termid":"GO:1903250"}


id: GO:0034666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha2 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alpha2-beta1 complex","synonyms":[{"name":"ITGA2-ITGB1 complex","type":"narrow"},{"name":"VLA-2 complex","type":"exact"}],"termid":"GO:0034666"}


id: FYPO:0000035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize arginine, and therefore requires arginine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for arginine","synonyms":[{"name":"arginine auxotrophy","type":"exact"},{"name":"growth auxotrophic for arginine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for arginine during vegetative growth","type":"exact"}],"termid":"FYPO:0000035"}


id: PBO:0077975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 3-1","termid":"PBO:0077975"}


id: GO:0120190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["PMID:22767443","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of bile acid secretion","termid":"GO:0120188"},{"relation_name":"negatively_regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of bile acid secretion","termid":"GO:0120190"}


id: PBO:0079852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B1, TLR signaling regulator","termid":"PBO:0079852"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: PBO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM254 ortholog","termid":"PBO:0016941"}


id: GO:0043573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of two or more leucoplasts by division of one leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid fission","termid":"GO:0043572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast fission","termid":"GO:0043573"}


id: PBO:0055227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2653","termid":"PBO:0055227"}


id: PBO:0059397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS30 divergent transcript","termid":"PBO:0059397"}


id: PBO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPCML intronic transcript 2","termid":"PBO:0061889"}


id: PBO:0041312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 66","termid":"PBO:0041312"}


id: GO:0009624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nematode","synonyms":[{"name":"response to nematodes","type":"exact"}],"termid":"GO:0009624"}


id: PR:O13726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium/hydrogen exchanger 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01541","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Na(+)/H(+) antiporter C15A10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.06","secondary_identifiers":["UniProtKB:O13726"],"synonyms":[{"name":"Spom972h-SLC9A9","type":"exact"}],"termid":"PR:O13726"}


id: PBO:0051752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 1","termid":"PBO:0051752"}


id: PBO:0030407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Glc2Man9GlcNAc_absent_from_cell","termid":"PBO:0030407"}


id: GO:0004339
data:
  {"annotated_genes":["SJAG_02076"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99479],"is_not":false,"summary":null,"term":"GO:0004339"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose.","definition_xrefs":["EC:3.2.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucan 1,4-alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.3-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan glucohydrolase activity","type":"related"},{"name":"amyloglucosidase activity","type":"related"},{"name":"exo-1,4-alpha-glucosidase activity","type":"related"},{"name":"gamma-1,4-glucan glucohydrolase activity","type":"related"},{"name":"gamma-amylase activity","type":"related"},{"name":"glucoamylase activity","type":"exact"},{"name":"glucose amylase activity","type":"related"},{"name":"lysosomal alpha-glucosidase activity","type":"broad"}],"termid":"GO:0004339","terms_by_termid":{"GO:0004339":null}}


id: PBO:0074074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 48","termid":"PBO:0074074"}


id: PBO:0038310
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_first_sent_to_curator_date","termid":"PBO:0038310"}


id: FYPO:0006407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nitrosative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to nitrosative stress","synonyms":[{"name":"decreased growth during cellular response to nitrosative stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to nitrosative stress","type":"exact"},{"name":"hypersensitive to nitrosative stress","type":"exact"},{"name":"sensitive to nitric oxide","type":"related"},{"name":"sensitive to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"sensitive to nitrosative stress during vegetative growth","type":"exact"}],"termid":"FYPO:0006407"}


id: PBO:0081546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 462","termid":"PBO:0081546"}


id: PBO:0069736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1017, pseudogene","termid":"PBO:0069736"}


id: PBO:0054583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1986","termid":"PBO:0054583"}


id: GO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in baroreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0001987"}


id: PBO:0054152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1519","termid":"PBO:0054152"}


id: GO:0052654
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106625],"is_not":false,"summary":null,"term":"GO:0052654"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamatic acid.","definition_xrefs":["EC:2.6.1.42","MetaCyc:BRANCHED-CHAINAMINOTRANSFERLEU-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"L-leucine transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01090"],"synonyms":[{"name":"L-leucine aminotransferase activity","type":"exact"}],"termid":"GO:0052654","terms_by_termid":{"GO:0052654":null}}


id: GO:0150061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 3 (AMY3), a G protein-coupled receptor complex, on the surface of the target cell. The AMY3 signaling pathway can also be initiated by the amyloid-beta complex. AMY3 signaling results in increased import of calcium ions into the cytosol across plasma membrane, increased phosphorylation of ERK1/2, Act, and a PKA regulatory subunit II, as well as increased expression of cFos.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"amylin receptor 3 signaling pathway","synonyms":[{"name":"AMY3 signaling pathway","type":"exact"}],"termid":"GO:0150061"}


id: PBO:0085625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; interacts with the Rho1p small GTP-binding protein and with the Rho-type GTPase Cdc42p; involved in maintenance of proper telomere length","termid":"PBO:0085625"}


id: PBO:0071860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 55","termid":"PBO:0071860"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: PBO:0046066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 1","termid":"PBO:0046066"}


id: PBO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 8","termid":"PBO:0052142"}


id: PBO:0048570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 3","termid":"PBO:0048570"}


id: PBO:0026650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0026650"}


id: PATO:0000862
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000862 pupillary reflex value (obsolete PATO:0000862)","termid":"PATO:0000862"}


id: GO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of flower development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:19380421","PMID:21689171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ senescence","termid":"GO:0080187"}


id: PBO:0049933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog interacting protein","termid":"PBO:0049933"}


id: GO:0099139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process during chimeric sorocarp development that increases by which a cell increases the number of spore cells sharing its genotype at the expense of cells of other genotypes.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"part_of","term_name":"chimeric sorocarp development","termid":"GO:0099134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cheating during chimeric sorocarp development","termid":"GO:0099139"}


id: GO:0042754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian rhythm","synonyms":[{"name":"down regulation of circadian rhythm","type":"exact"},{"name":"down-regulation of circadian rhythm","type":"exact"},{"name":"downregulation of circadian rhythm","type":"exact"},{"name":"inhibition of circadian rhythm","type":"narrow"}],"termid":"GO:0042754"}


id: PBO:0068621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 1","termid":"PBO:0068621"}


id: GO:0032525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the rostro-caudal axis of a somite, prior to the morphological formation of a somite boundary.","definition_xrefs":["PMID:16326386","PMID:17360776","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"anterior/posterior axis specification","termid":"GO:0009948"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite rostral/caudal axis specification","synonyms":[{"name":"somite rostrocaudal axis specification","type":"exact"},{"name":"somite rostrocaudal polarity","type":"related"}],"termid":"GO:0032525"}


id: PBO:0003838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc10","termid":"PBO:0003838"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: GO:0101003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a ficolin-1-rich granule.","definition_xrefs":["GOC:mec","PMID:23650620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"},{"relation_name":"part_of","term_name":"ficolin-1-rich granule","termid":"GO:0101002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"ficolin-1-rich granule membrane","termid":"GO:0101003"}


id: PBO:0083401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF YER134C","termid":"PBO:0083401"}


id: PBO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Oma1 (predicted)","termid":"PBO:0001241"}


id: PBO:0048153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1","termid":"PBO:0048153"}


id: PBO:0038945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase 1","termid":"PBO:0038945"}


id: PBO:0068918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 161, pseudogene","termid":"PBO:0068918"}


id: GO:0008486
data:
  {"annotated_genes":["SJAG_00244","SJAG_04870","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84942],"is_not":false,"summary":null,"term":"GO:0008486"},{"annotations":[101361,111222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[101362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"},{"annotations":[101363,111223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[101364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"},{"annotations":[101365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106211"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol polyphosphate + H2O = 1D-myo-inositol polyphosphate + phosphate.","definition_xrefs":["EC:3.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diphosphoinositol-polyphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.1.52-RXN","KEGG_REACTION:R05777"],"synonyms":[{"name":"DIPP activity","type":"related"},{"name":"diphospho-myo-inositol-polyphosphate diphosphohydrolase activity","type":"exact"},{"name":"diphosphoinositol polyphosphate phosphohydrolase activity","type":"exact"},{"name":"diphosphoinositol-polyphosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0008486","terms_by_termid":{"GO:0008486":null,"GO:0052843":null,"GO:0052845":null,"GO:0052846":null,"GO:0052847":null,"GO:0106211":null}}


id: PBO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomerase_holoenzyme_complex_assembly","termid":"PBO:0034454"}


id: PBO:0080023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 9, pseudogene","termid":"PBO:0080023"}


id: GO:0007352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the dorsal/ventral axis of the embryo, through the products of genes expressed in the zygote.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygotic specification of dorsal/ventral axis","synonyms":[{"name":"zygotic determination of dorsal-ventral axis","type":"related"},{"name":"zygotic determination of dorsal/ventral axis","type":"related"},{"name":"zygotic determination of dorsoventral axis","type":"related"}],"termid":"GO:0007352"}


id: GO:1905180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle tissue regeneration.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:23222520","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue regeneration","termid":"GO:1905178"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue regeneration","synonyms":[{"name":"activation of cardiac muscle tissue regeneration","type":"narrow"},{"name":"up regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"up-regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"upregulation of cardiac muscle tissue regeneration","type":"exact"}],"termid":"GO:1905180"}


id: PBO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family protein, involved in iron-sulphur cluster assembly (predicted)","termid":"PBO:0003442"}


id: GO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"very long-chain fatty acid catabolic process","synonyms":[{"name":"very-long-chain fatty acid breakdown","type":"exact"},{"name":"very-long-chain fatty acid catabolic process","type":"exact"},{"name":"very-long-chain fatty acid catabolism","type":"exact"},{"name":"very-long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042760"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: PBO:0038678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 4","termid":"PBO:0038678"}


id: PBO:0060451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine kinase","termid":"PBO:0060451"}


id: GO:0036013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the cyanelle envelope.","definition_xrefs":["GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid outer membrane","termid":"GO:0009527"},{"relation_name":"is_a","term_name":"cyanelle membrane","termid":"GO:0033113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle outer membrane","termid":"GO:0036013"}


id: PBO:0039468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 16","termid":"PBO:0039468"}


id: PBO:0077796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin 1A interacting protein 2","termid":"PBO:0077796"}


id: PBO:0004464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator (predicted)","termid":"PBO:0004464"}


id: PBO:0051745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 11","termid":"PBO:0051745"}


id: PBO:0069391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 651, pseudogene","termid":"PBO:0069391"}


id: PBO:0068239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal N5","termid":"PBO:0068239"}


id: GO:0003959
data:
  {"annotated_genes":["SJAG_05015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103238],"is_not":false,"summary":null,"term":"GO:0003959"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + acceptor = NADP+ + reduced acceptor.","definition_xrefs":["RHEA:13149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NADPH dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NADPH-DEHYDROGENASE-RXN","Reactome:R-HSA-9018867","UM-BBD_enzymeID:e0523","GO:0008468","EC:1.6.99.1","GO:0016660","Reactome:R-HSA-9018901","Reactome:R-HSA-9027631","Reactome:R-HSA-9027625","Reactome:R-HSA-9027632"],"synonyms":[{"name":"NADPH diaphorase activity","type":"related"},{"name":"NADPH-dehydrogenase activity","type":"related"},{"name":"NADPH2 diaphorase activity","type":"related"},{"name":"NADPH2-dehydrogenase activity","type":"related"},{"name":"NADPH:(acceptor) oxidoreductase activity","type":"related"},{"name":"NADPH:acceptor oxidoreductase activity","type":"related"},{"name":"OYE","type":"related"},{"name":"TPNH dehydrogenase activity","type":"related"},{"name":"TPNH-diaphorase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"old yellow enzyme","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"triphosphopyridine diaphorase activity","type":"related"},{"name":"triphosphopyridine nucleotide diaphorase activity","type":"related"}],"termid":"GO:0003959","terms_by_termid":{"GO:0003959":null}}


id: GO:0140236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the presynapse.","definition_xrefs":["PMID:27321671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation at presynapse","termid":"GO:0140236"}


id: PBO:0085635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in histone H4 acetylation at ribosomal protein genes; interacts with and modulates NuA4 histone acetyltransferase complex; required for growth on glycerol as a carbon source; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; contains a segment predicted to resemble the winged-helix/forkhead domain located in DNA-binding proteins","termid":"PBO:0085635"}


id: PBO:0028032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_chromosome_fragmentation_upon_segregation","termid":"PBO:0028032"}


id: PBO:0081547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 467","termid":"PBO:0081547"}


id: PBO:0080955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 10, pseudogene","termid":"PBO:0080955"}


id: PATO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000873 cataleptic (obsolete PATO:0000873)","termid":"PATO:0000873"}


id: GO:0038059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex containing two IkappaB kinase (IKK) alpha subunits.","definition_xrefs":["GOC:bf","PMID:18626576","PMID:21173796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IKKalpha-IKKalpha complex","synonyms":[{"name":"IKKalpha homodimer","type":"exact"},{"name":"IKKalpha homodimeric complex","type":"exact"},{"name":"IKKalpha-IKKalpha protein complex","type":"exact"},{"name":"IkappaB kinase alpha homodimer","type":"exact"},{"name":"IkappaB kinase-alpha homodimer","type":"exact"}],"termid":"GO:0038059"}


id: PBO:0083784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in mtDNA inheritance; may also function in the partitioning of the mitochondrial organelle or in the segregation of chromosomes, exhibits regions similar to members of a GTPase family","termid":"PBO:0083784"}


id: PBO:0110230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1/2 complex WD repeat protein Wat1/Lst8","termid":"PBO:0110230"}


id: GO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the instar larva or pupa over time, from its formation to the mature structure. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval or pupal development","termid":"GO:0002165"}


id: SO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An abundant small nuclear RNA that, together with associated cellular proteins, regulates the activity of the positive transcription elongation factor b (P-TEFb). It is often described in literature as similar to a snRNA, except of longer length.","definition_xrefs":["PMID:19246988","PMID:27369380","PMID:21853533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK","synonyms":[{"name":"7SK RNA","type":"exact"},{"name":"RNA 7SK","type":"exact"}],"termid":"SO:0002340"}


id: GO:0046331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between cells of equivalent developmental potential that results in these cells adopting different developmental fates. An example is the suppression by cells with a particular fate of the adoption of the same fate by surrounding cells.","definition_xrefs":["GOC:kmv","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"lateral inhibition","termid":"GO:0046331"}


id: FYECO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium azide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaN3","synonyms":[{"name":"+ respiratory chain inhibitor","type":"related"},{"name":"+ sodium azide","type":"exact"}],"termid":"FYECO:0000380"}


id: GO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of male sex of an individual organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male sex determination","termid":"GO:0030238"}


id: GO:0009178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxynucleoside monophosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate catabolic process","termid":"GO:0009131"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009159"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009178"}


id: PBO:0085157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide binding alpha subunit of the heterotrimeric G protein; interacts with the receptor Gpr1p, has signaling role in response to nutrients; required for the recruitment of Ras-GTP at the plasma membrane and in the nucleus","termid":"PBO:0085157"}


id: GO:0044774
data:
  {"annotated_genes":["SJAG_03927","SJAG_04287","SJAG_02576","SJAG_03720","SJAG_00623","SJAG_02026","SJAG_04332","SJAG_01044","SJAG_00486","SJAG_02266","SJAG_04280","SJAG_01605","SJAG_01076","SJAG_03898","SJAG_00169","SJAG_03695","SJAG_05373","SJAG_00364","SJAG_00640","SJAG_04140","SJAG_02074","SJAG_02771","SJAG_01146","SJAG_01873","SJAG_03026","SJAG_00327","SJAG_01677","SJAG_01205","SJAG_01010","SJAG_03160","SJAG_03048","SJAG_02098","SJAG_01680","SJAG_01429","SJAG_02563","SJAG_04671","SJAG_00429","SJAG_01084","SJAG_03942","SJAG_01855","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87972,90125,110432,112168,105504,112398,113841,110638,107378,98530,89745,79015,95355,102789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[105505,90148,102790,112226,95356,96698,112963,108214,85333,90126,88711,104016,113250,113415,87613,99495,95522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[105863,87491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[87614,97216,107909,87973,105506,85334,113170,95523,110433,113842,86422,84775,96699,102791,90128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[95357,84776,103849,108216,113251,98532,92195,87615,88712,85335,95524,90717,107910,102792,97021,112228,97688,86647,85380,112227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA during mitosis. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and ends with signal transduction.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902403","GO:0070683"],"synonyms":[{"name":"intracellular signal transduction involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signal transduction involved in topo II checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signal transduction pathway involved in topoisomerase II checkpoint","type":"narrow"},{"name":"intracellular signaling cascade involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in topo II checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"intracellular signaling pathway involved in topo II checkpoint","type":"narrow"},{"name":"intracellular signaling pathway involved in topoisomerase II checkpoint","type":"related"},{"name":"mitotic DNA integrity checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition decatenation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA integrity checkpoint","type":"exact"},{"name":"signal transduction via intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in topo II checkpoint","type":"related"}],"termid":"GO:0044774","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null}}


id: PR:O74847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A brain protein 44-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14154:SF3","PRO:DNx","OMA:SCHPO04225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.11","secondary_identifiers":["UniProtKB:O74847"],"synonyms":[{"name":"MPC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MPC1","type":"exact"}],"termid":"PR:O74847"}


id: PBO:0076178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 2A member 1","termid":"PBO:0076178"}


id: GO:2000903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellooligosaccharide catabolic process","synonyms":[{"name":"cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000903"}


id: PBO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.31","termid":"PBO:0005241"}


id: PBO:0085810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YKR074W is not an essential gene; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0085810"}


id: PBO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 11","termid":"PBO:0060278"}


id: PBO:0054977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2391","termid":"PBO:0054977"}


id: GO:0051067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6,7-dihydropteridine, a bicyclic compound with the formula C6H6N4.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydropteridine metabolic process","synonyms":[{"name":"6,7-dihydropteridine metabolic process","type":"exact"},{"name":"dihydropteridine metabolism","type":"exact"},{"name":"dihydropteridine reduction","type":"narrow"}],"termid":"GO:0051067"}


id: PBO:0078397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 7-1","termid":"PBO:0078397"}


id: PBO:0055019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2434","termid":"PBO:0055019"}


id: PBO:0003744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7 (predicted)","termid":"PBO:0003744"}


id: FYPO:0005019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal septum assembly","termid":"FYPO:0000673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of septum assembly","synonyms":[{"name":"normal duration of division septum assembly","type":"exact"},{"name":"normal duration of septation","type":"broad"},{"name":"normal duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"normal duration of septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005019"}


id: PBO:0014248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint ubiquitin ligase Dma1","termid":"PBO:0014248"}


id: PBO:0085899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in chitin biosynthesis by regulation of Chs3p export from the ER; relocalizes from bud neck to ER upon DNA replication stress","termid":"PBO:0085899"}


id: PBO:0084244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner nuclear membrane protein; highly enriched at telomeres and subtelomeric regions; functions in regulation of subtelomeric genes and is linked to TREX (transcription export) factors; SRC1 produces 2 splice variant proteins with different functions; alternative splicing of SRC1 pre-mRNA is promoted by Hub1p; mutant has aneuploidy tolerance; SRC1 has a paralog, HEH2, that arose from the whole genome duplication","termid":"PBO:0084244"}


id: GO:0006859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed extracellular movement of carbohydrates.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular carbohydrate transport (obsolete GO:0006859)","termid":"GO:0006859"}


id: PBO:0064169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G4E antisense RNA 1","termid":"PBO:0064169"}


id: SO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the macronuclei of ciliates.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_sequence","synonyms":[{"name":"macronuclear sequence","type":"exact"}],"termid":"SO:0000083"}


id: GO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.","definition_xrefs":["PMID:1402651","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}


id: GO:1901717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid catabolic process","termid":"GO:1901715"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"activation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"activation of 4-aminobutanoate catabolism","type":"exact"},{"name":"activation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"activation of 4-aminobutyrate catabolism","type":"exact"},{"name":"activation of GABA catabolic process","type":"exact"},{"name":"activation of GABA catabolism","type":"exact"},{"name":"activation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"activation of gamma-aminobutyric acid catabolic process","type":"narrow"},{"name":"activation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"activation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"positive regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"positive regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"positive regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"positive regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"positive regulation of GABA catabolic process","type":"exact"},{"name":"positive regulation of GABA catabolism","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"up regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"up regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"up regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"up regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"up regulation of GABA catabolic process","type":"exact"},{"name":"up regulation of GABA catabolism","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"up-regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"up-regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"up-regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"up-regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"up-regulation of GABA catabolic process","type":"exact"},{"name":"up-regulation of GABA catabolism","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"upregulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"upregulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"upregulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"upregulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"upregulation of GABA catabolic process","type":"exact"},{"name":"upregulation of GABA catabolism","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901717"}


id: PBO:0042473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB domain containing protein 2","termid":"PBO:0042473"}


id: PBO:0084479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maturase-like coding sequence downstream of COX3/Q0275; present in some S. cerevisiae strains and other Saccharomyces species; compound ORF with homology to other group I open reading frames; in S288C is interrupted by two GC clusters, both of which ultimately result in a -1 frameshlft","termid":"PBO:0084479"}


id: PBO:0049139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 3","termid":"PBO:0049139"}


id: FYPO:0004381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PMID:17426725","PMID:21306900","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"merotelic kinetochore attachment","termid":"FYPO:0002651"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"merotelic kinetochore attachment during mitosis","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"merotelic kinetochore attachment during mitotic M phase","type":"related"},{"name":"merotelic kinetochore attachment during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004381"}


id: PR:O74907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA2 and CDKN1A-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13261:SF0","PRO:DNx","OMA:SCHPO04180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.08","secondary_identifiers":["UniProtKB:O74907"],"synonyms":[{"name":"Spom972h-BCCIP","type":"exact"}],"termid":"PR:O74907"}


id: GO:0031473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class III myosin; myosin III is monomeric and has an N terminal kinase domain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"myosin III binding","termid":"GO:0031473"}


id: PBO:0063185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox interacting protein 1","termid":"PBO:0063185"}


id: PBO:0053168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoid enhancer binding factor 1","termid":"PBO:0053168"}


id: GO:0016410
data:
  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id: FYPO:0004300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an ATPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal ATPase activity","termid":"FYPO:0004300"}


id: FYPO:0004455
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050"],"single_locus_genotype_uniquenames":["nur1delta"],"synonyms":[{"name":"decreased protein localisation to nucleus","type":"exact"},{"name":"reduced protein localization to nucleus","type":"exact"}],"termid":"FYPO:0004455","terms_by_termid":{"FYECO:0000137":null,"FYPO:0007073":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0036367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates (predicted)","termid":"PBO:0036367"}


id: FYPO:0008159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation at the silent mating-type locus does not occur. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be abolished.","definition_xrefs":["PMID:16246721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone phosphorylation during vegetative growth","termid":"FYPO:0002592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008159"}


id: PBO:0078483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-3","termid":"PBO:0078483"}


id: GO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via an ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:14647477","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"}],"termid":"GO:0002484"}


id: PBO:0039359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 1","termid":"PBO:0039359"}


id: PBO:0027174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_G418","termid":"PBO:0027174"}


id: PBO:0090763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","termid":"PBO:0090763"}


id: FYPO:0000020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"pear-shaped cell","synonyms":[{"name":"cell morphology, pear shaped","type":"exact"},{"name":"ice cream cone-shaped cell","type":"exact"}],"termid":"FYPO:0000020"}


id: PBO:0036142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron","termid":"PBO:0036142"}


id: GO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}


id: GO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an eosinophil cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["CL:0000771","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate determination","synonyms":[{"name":"eosinophil cell fate determination","type":"exact"}],"termid":"GO:0035858"}


id: GO:0048562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic organ morphogenesis","termid":"GO:0048562"}


id: PBO:0070447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 4","termid":"PBO:0070447"}


id: PBO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 2","termid":"PBO:0043985"}


id: SO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence at the N terminus deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"CDS_five_prime_extension","termid":"SO:0002228"},{"relation_name":"is_a","term_name":"elongated_polypeptide","termid":"SO:0001609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide_N_terminal","synonyms":[{"name":"elongated polypeptide N terminal","type":"exact"}],"termid":"SO:0001611"}


id: PBO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2429","termid":"PBO:0055014"}


id: PR:Q10349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoserine aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01578","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.07","secondary_identifiers":["UniProtKB:Q10349"],"synonyms":[{"name":"PSAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PSAT1","type":"exact"},{"name":"phosphohydroxythreonine aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10349"}


id: PBO:0068274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 11 (inactive)","termid":"PBO:0068274"}


id: SO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone constructed from more than one mRNA. Usually an experimental artifact.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_chimeric_cDNA","synonyms":[{"name":"invalidated by chimeric cDNA","type":"exact"}],"termid":"SO:0000362"}


id: PBO:0050192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: GO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V1A vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"V1A vasopressin receptor binding","synonyms":[{"name":"V1A vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031894"}


id: PBO:0031695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_import","termid":"PBO:0031695"}


id: GO:0030583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myxococcal fruiting body over time, from its formation to the mature structure. The process begins when myxococci respond to a lack of nutrients in the environment and ends when the myxococcal fruiting body is a mature structure.","definition_xrefs":["GOC:mtg_sensu","ISBN:0815316194","PMID:11121786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxococcal fruiting body development","secondary_identifiers":["GO:0055084"],"synonyms":[{"name":"fruiting body development in cellular response to starvation","type":"broad"},{"name":"fruiting body development in response to starvation","type":"broad"}],"termid":"GO:0030583"}


id: GO:1903919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament severing.","definition_xrefs":["GOC:TermGenie","PMID:23325791","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"negatively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament severing","synonyms":[{"name":"down regulation of F-actin severing","type":"exact"},{"name":"down regulation of actin filament severing","type":"exact"},{"name":"down regulation of actin filament severing activity","type":"related"},{"name":"down regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"down-regulation of F-actin severing","type":"exact"},{"name":"down-regulation of actin filament severing","type":"exact"},{"name":"down-regulation of actin filament severing activity","type":"related"},{"name":"down-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"downregulation of F-actin severing","type":"exact"},{"name":"downregulation of actin filament severing","type":"exact"},{"name":"downregulation of actin filament severing activity","type":"related"},{"name":"downregulation of barbed-end actin capping/severing activity","type":"related"},{"name":"inhibition of F-actin severing","type":"narrow"},{"name":"inhibition of actin filament severing","type":"narrow"},{"name":"inhibition of actin filament severing activity","type":"related"},{"name":"inhibition of barbed-end actin capping/severing activity","type":"related"},{"name":"negative regulation of F-actin severing","type":"exact"},{"name":"negative regulation of actin filament severing activity","type":"related"},{"name":"negative regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903919"}


id: GO:0005758
data:
  {"annotated_genes":["SJAG_02592","SJAG_03574","SJAG_00480","SJAG_00230","SJAG_00576","SJAG_02038","SJAG_02229","SJAG_01560","SJAG_02656","SJAG_02917","SJAG_00687","SJAG_00668","SJAG_02524","SJAG_02744","SJAG_01647","SJAG_02887","SJAG_05261","SJAG_04208","SJAG_00564","SJAG_00449","SJAG_02360","SJAG_01996","SJAG_03199","SJAG_00455","SJAG_05398","SJAG_06440","SJAG_04533","SJAG_01949","SJAG_05199","SJAG_00196","SJAG_04008","SJAG_04116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84557,90541,90615,91142,93315,94304,94665,96230,96315,97444,98375,98383,100190,101066,101067,103033,103149,103345,103652,103661,105430,105700,105952,106559,109304,111195,112270,112940,113353],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[88971,84882,112430,86596],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the mitochondrial envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"mitochondrial envelope","termid":"GO:0005740"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00230":null,"SJAG_00449":null,"SJAG_00455":null,"SJAG_00480":null,"SJAG_00564":null,"SJAG_00576":null,"SJAG_00668":null,"SJAG_00687":null,"SJAG_01560":null,"SJAG_01647":null,"SJAG_01949":null,"SJAG_01996":null,"SJAG_02038":null,"SJAG_02229":null,"SJAG_02360":null,"SJAG_02524":null,"SJAG_02592":null,"SJAG_02656":null,"SJAG_02744":null,"SJAG_02887":null,"SJAG_02917":null,"SJAG_03199":null,"SJAG_03574":null,"SJAG_04008":null,"SJAG_04116":null,"SJAG_04208":null,"SJAG_04533":null,"SJAG_05199":null,"SJAG_05261":null,"SJAG_05398":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial intermembrane space","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031971","NIF_Subcellular:sao118944228"],"synonyms":[{"name":"mitochondrial envelope lumen","type":"exact"},{"name":"mitochondrial membrane lumen","type":"related"}],"termid":"GO:0005758","terms_by_termid":{"GO:0005758":null,"GO:0042719":null}}


id: PBO:0004758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf28","termid":"PBO:0004758"}


id: GO:0097715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["GOC:sl","PMID:7061416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"response to viscosity","termid":"GO:0097714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to viscosity","termid":"GO:0097715"}


id: PBO:0009498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA hydrolase (predicted)","termid":"PBO:0009498"}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: GO:0120093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"}


id: PBO:0066405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA proto-oncogene, NF-kB subunit","termid":"PBO:0066405"}


id: PR:O94702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endoplasmic reticulum metallopeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum metallopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.02c","secondary_identifiers":["UniProtKB:O94702"],"synonyms":[{"name":"FXNA-like protease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ERMP1","type":"exact"}],"termid":"PR:O94702"}


id: PBO:0082288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF-like small GTPase of the RAS superfamily; required for recruitment of Arl1p, a GTPase that regulates membrane traffic, to the Golgi apparatus; NatC-catalyzed N-terminal acetylation regulates Golgi membrane association mediated by interaction with membrane receptor, Sys1p; similar to ADP-ribosylation factor and orthologous to mammalian ARFRP1","termid":"PBO:0082288"}


id: GO:0141081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or stops an inflammasome-mediated signal transduction pathway in the host organism by interfering with its normal execution. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:36227980","PMID:27214553","PMID:34324582","PMID:26687278","PMID:29061850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host inflammasome-mediated signal transduction","synonyms":[{"name":"perturbation of host inflammasome-mediated signal transduction","type":"broad"}],"termid":"GO:0141081"}


id: GO:0006288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ligation by DNA ligase of DNA strands. Ligation occurs after polymerase action to fill the gap left by the action of endonucleases during base-excision repair.","definition_xrefs":["ISBN:1550091131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligation involved in DNA repair","termid":"GO:0051103"},{"relation_name":"part_of","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"base-excision repair, DNA ligation","termid":"GO:0006288"}


id: GO:0018400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline to form 3-hydroxy-L-proline; catalyzed by procollagen-proline 3-dioxygenase.","definition_xrefs":["RESID:AA0029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"peptidyl-proline hydroxylation","termid":"GO:0019511"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation to 3-hydroxy-L-proline","termid":"GO:0018400"}


id: GO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated cytotoxicity","termid":"GO:0001915"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell degranulation","termid":"GO:0043317"},{"relation_name":"negatively_regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytotoxic T cell degranulation","synonyms":[{"name":"down regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"down-regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"downregulation of cytotoxic T cell degranulation","type":"exact"},{"name":"inhibition of cytotoxic T cell degranulation","type":"narrow"},{"name":"negative regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043318"}


id: PBO:0064719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 55","termid":"PBO:0064719"}


id: GO:1990740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the non-selective, energy-independent passage of anions across a lipid bilayer down a concentration gradient.","definition_xrefs":["ISBN:0878937420","Wikipedia:Ion_channel#Classification_by_type_of_ions","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete non-selective anion channel activity (obsolete GO:1990740)","synonyms":[{"name":"nonselective anion channel activity","type":"exact"}],"termid":"GO:1990740"}


id: PBO:0048929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi membrane protein 2","termid":"PBO:0048929"}


id: GO:0070337
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95529],"is_not":false,"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a 3'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 3'-end of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["PMID:15189154","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"3'-flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070337","terms_by_termid":{"GO:0070337":null}}


id: PBO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain roadblock-type 1","termid":"PBO:0045690"}


id: GO:0035094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.","definition_xrefs":["ISBN:0582227089","GOC:ef","GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nicotine","termid":"GO:0035094"}


id: PBO:0058750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6874","termid":"PBO:0058750"}


id: PBO:0082925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome oxidase assembly factor; null mutation results in respiratory deficiency with specific loss of cytochrome oxidase activity; functions downstream of assembly factors Mss51p and Coa1p and interacts with assembly factor Shy1p","termid":"PBO:0082925"}


id: FYPO:0005948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin regions where RNA polymerase II actively transcribes genes is decreased.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0004161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II highly transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005948"}


id: GO:1901884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxycoumarin.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"4-hydroxycoumarin metabolic process","termid":"GO:1901882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"4-hydroxycoumarin biosynthetic process","synonyms":[{"name":"4-hydroxycoumarin anabolism","type":"exact"},{"name":"4-hydroxycoumarin biosynthesis","type":"exact"},{"name":"4-hydroxycoumarin formation","type":"exact"},{"name":"4-hydroxycoumarin synthesis","type":"exact"}],"termid":"GO:1901884"}


id: PBO:0062843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1","termid":"PBO:0062843"}


id: PBO:0064158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIC","termid":"PBO:0064158"}


id: PBO:0005334
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia","termid":"PBO:0005334"}


id: PBO:0053258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of ATE1","termid":"PBO:0053258"}


id: GO:0060549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of fructose 1,6-bisphosphate 1-phosphatase activity. Fructose 1,6-bisphosphate 1-phosphatase activity is the catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate phosphatase activity","termid":"GO:0032113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fructose 1,6-bisphosphate 1-phosphatase activity","termid":"GO:0060549"}


id: GO:0070203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to chromosome","termid":"GO:0070202"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromosome, telomeric region","termid":"GO:1904814"},{"relation_name":"regulates","term_name":"establishment of protein localization to telomere","termid":"GO:0070200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to telomere","synonyms":[{"name":"regulation of establishment of protein localisation to telomere","type":"exact"}],"termid":"GO:0070203"}


id: GO:0019371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which prostaglandins are formed from arachidonic acid, and in which prostaglandin-endoperoxide synthase (cyclooxygenase) catalyzes the committed step in the conversion of arachidonic acid to the prostaglandin-endoperoxides PGG2 and PGH2.","definition_xrefs":["PMID:19854273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid metabolic process","termid":"GO:0019369"},{"relation_name":"part_of","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"cyclooxygenase pathway","termid":"GO:0019371"}


id: GO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbivore","termid":"GO:0080027"}


id: PBO:0026932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_HMW_ubiquitin_conjugate_level","termid":"PBO:0026932"}


id: PBO:0040894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1B","termid":"PBO:0040894"}


id: GO:0007484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived genitalia development","synonyms":[{"name":"genital development","type":"broad"}],"termid":"GO:0007484"}


id: GO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism activates or increases the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation by host of viral process","termid":"GO:0044794"},{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"positively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of viral genome replication","termid":"GO:0044829"}


id: PBO:0044186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase 2","termid":"PBO:0044186"}


id: PBO:0031771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_fermentation","termid":"PBO:0031771"}


id: GO:0032777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric H4/H2A histone acetyltransferase complex with a substrate preference of chromatin over free histones. It contains a subset of the proteins found in the larger NuA4 histone acetyltransferase complex; for example, the S. cerevisiae complex contains Esa1p, Yng2p, and Epl1p.","definition_xrefs":["PMID:15964809","PMID:12782659","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}


id: PBO:0089602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear import protein Nxt2","termid":"PBO:0089602"}


id: GO:0106331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-4-O-acetylneuraminate = acetate + H+ + N-acetylneuraminate.","definition_xrefs":["PMID:22291594","RHEA:25564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialate O-acetylesterase activity","termid":"GO:0001681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"sialate 4-O-acetylesterase activity","termid":"GO:0106331"}


id: PBO:0064203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 9 pseudogene 1","termid":"PBO:0064203"}


id: PBO:0042261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5","termid":"PBO:0042261"}


id: GO:0035273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phthalate, any ester or salt of phthalic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phthalate binding","termid":"GO:0035273"}


id: PBO:0075895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 antisense RNA 1","termid":"PBO:0075895"}


id: PBO:0054706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2115","termid":"PBO:0054706"}


id: PBO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Sey1 (predicted)","termid":"PBO:0000698"}


id: MOD:01946
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)pentanedioicacid by crosslinking either an aspartic acid residue or an asparagine residue with the following glutamic acid\\n residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"}


id: GO:0072317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glucan endo-1,3-beta-D-glucosidase activity involved in ascospore release from ascus (obsolete GO:0072317)","termid":"GO:0072317"}


id: PBO:0051273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 4","termid":"PBO:0051273"}


id: PBO:0074335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1","termid":"PBO:0074335"}


id: SO:0001200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negative_sense_RNA_viral_sequence is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus that is complementary to mRNA and must be converted to positive sense RNA by RNA polymerase before translation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative_sense_ssRNA_viral_sequence","synonyms":[{"name":"negative sense single stranded RNA virus","type":"related"},{"name":"negative sense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001200"}


id: GO:1990354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a SUMO protein bound to a SUMO activating enzyme complex. Activation by the E1 complex and linkage to the E2 enzyme UBE2I is required for the formation of covalent bonds between SUMO and its ultimate target proteins.","definition_xrefs":["GOC:bhm","PMID:15660128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"activated SUMO-E1 ligase complex","synonyms":[{"name":"SUMO-SAE1/2 complex","type":"narrow"}],"termid":"GO:1990354"}


id: PBO:0085527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085527"}


id: PBO:0049930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog acyltransferase like","termid":"PBO:0049930"}


id: RO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelopath_of","termid":"RO:0002555"}


id: GO:0050962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a light stimulus is received by a cell and converted into a molecular signal as part of the sensory perception of light.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of light stimulus","termid":"GO:0050953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of light stimulus","type":"exact"},{"name":"sensory detection of light stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of light stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of light stimulus","type":"exact"},{"name":"sensory transduction of light stimulus","type":"exact"},{"name":"sensory transduction of light stimulus during sensory perception","type":"exact"}],"termid":"GO:0050962"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["GOC:pz","EC:1.13.11.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["RHEA:26401","MetaCyc:RXN-12393"],"termid":"GO:0102251"}


id: GO:1900104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hyaluranon cable assembly.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"hyaluranon cable assembly","termid":"GO:0036118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of hyaluranon cable assembly","synonyms":[{"name":"regulation of HA cable assembly","type":"exact"}],"termid":"GO:1900104"}


id: GO:1990175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EH domain of a protein. The EH stand for Eps15 homology. This was originally identified as a motif present in three copies at the NH2-termini of Eps15 and of the related molecule Eps15R.","definition_xrefs":["GOC:hjd","PMID:11911876","PMID:21115825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"EH domain binding","termid":"GO:1990175"}


id: GO:0070214
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the protein-tyrosine kinase CSK and the GTPase-activating protein (GAP)-associated p62 (GAP-A.p62); may mediate translocation of proteins, including GAP and CSK, to membrane or cytoskeletal regions upon c-Src activation.","definition_xrefs":["PMID:7544435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CSK-GAP-A.p62 complex","termid":"GO:0070214"}


id: GO:0030169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a low-density lipoprotein particle, a lipoprotein particle that is rich in cholesterol esters and low in triglycerides, is typically composed of APOB100 and APOE, and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"low-density lipoprotein particle binding","synonyms":[{"name":"LDL binding","type":"exact"}],"termid":"GO:0030169"}


id: PR:Q9P7E1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P4H10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.07","synonyms":[{"name":"Spom972h-SPBP4H10.07","type":"exact"}],"termid":"PR:Q9P7E1"}


id: PR:O14285
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit spc34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.17c","synonyms":[{"name":"Spom972h-spc34","type":"exact"},{"name":"outer kinetochore protein spc34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14285"}


id: GO:0060568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"regulation of peptide hormone processing","termid":"GO:0060568"}


id: PBO:0004846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase (predicted)","termid":"PBO:0004846"}


id: GO:0060382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA strand elongation","termid":"GO:0060382"}


id: GO:1990298
data:
  {"annotated_genes":["SJAG_01082","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90372,110657],"is_not":false,"summary":null,"term":"GO:1990298"}]},"cv_name":"cellular_component","definition":"Protein complex that associates with the kinetochores.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"bub1-bub3 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990298","terms_by_termid":{"GO:1990298":null}}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: PR:O60094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myb-binding protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03187","PRO:DNx","PANTHER:PTHR13213:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase V (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.14c","secondary_identifiers":["UniProtKB:O60094"],"synonyms":[{"name":"POL V (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MYBBP1A","type":"exact"}],"termid":"PR:O60094"}


id: PBO:0042349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD83 molecule pseudogene 1","termid":"PBO:0042349"}


id: PBO:0068972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 216, pseudogene","termid":"PBO:0068972"}


id: GO:0036005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a macrophage colony-stimulating factor stimulus.","definition_xrefs":["PMID:14687666","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to macrophage colony-stimulating factor","synonyms":[{"name":"response to M-CSF","type":"exact"},{"name":"response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:0036005"}


id: PBO:0039251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member A1","termid":"PBO:0039251"}


id: PBO:0058486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5681a","termid":"PBO:0058486"}


id: PBO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC27 antisense RNA 1","termid":"PBO:0045248"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: PBO:0066417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of early neurogenesis 1","termid":"PBO:0066417"}


id: PBO:0029858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated_germ_tube","termid":"PBO:0029858"}


id: PBO:0074732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 90","termid":"PBO:0074732"}


id: GO:1904150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell mediated cytotoxicity.","definition_xrefs":["PMID:19100238","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"regulation of microglial cell mediated cytotoxicity","termid":"GO:1904149"},{"relation_name":"negatively_regulates","term_name":"microglial cell mediated cytotoxicity","termid":"GO:0090634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell mediated cytotoxicity","synonyms":[{"name":"down regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"down-regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"downregulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"inhibition of microglial cell mediated cytotoxicity","type":"narrow"}],"termid":"GO:1904150"}


id: PBO:0089661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-translocating ATPase complex Lem3 family subunit","termid":"PBO:0089661"}


id: FYPO:0005651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is abnormal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear morphology during meiosis I","synonyms":[{"name":"abnormal nuclear morphology during first meiotic nuclear division","type":"exact"},{"name":"deformed nucleus during meiosis I","type":"exact"},{"name":"nuclear morphology defects during meiosis I","type":"exact"}],"termid":"FYPO:0005651"}


id: PBO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs1","termid":"PBO:0036348"}


id: PBO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 50","termid":"PBO:0070942"}


id: PBO:0055148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2567","termid":"PBO:0055148"}


id: GO:0061284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric proximal tubule identity","termid":"GO:0061284"}


id: MOD:00753
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a chlorine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorinated residue","synonyms":[{"name":"ClRes","type":"exact"}],"termid":"MOD:00753"}


id: PBO:0069836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1122, pseudogene","termid":"PBO:0069836"}


id: PBO:0071340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 4","termid":"PBO:0071340"}


id: GO:1902554
data:
  {"annotated_genes":["SJAG_00100","SJAG_03525","SJAG_05017","SJAG_00439","SJAG_03160","SJAG_01213","SJAG_04420","SJAG_03931","SJAG_03618","SJAG_03048","SJAG_04232","SJAG_03967","SJAG_01149","SJAG_01716","SJAG_04312","SJAG_03591","SJAG_03421","SJAG_00973","SJAG_04140","SJAG_02404","SJAG_03695","SJAG_01207","SJAG_00150","SJAG_01245","SJAG_05978","SJAG_03206","SJAG_02057","SJAG_04368","SJAG_01274","SJAG_00142","SJAG_01799","SJAG_00758","SJAG_03699","SJAG_02441","SJAG_00901","SJAG_00512","SJAG_00995","SJAG_04614","SJAG_04502","SJAG_03061","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113937,84064,96131,90984,94046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990316"},{"annotations":[98007,96599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005952"},{"annotations":[91983,107093,113145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[104534,98516,113215,101856,87916,102518,84444,105215,102425,97783,107364,105054,102131,101174,100493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000307"},{"annotations":[113412,108210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031431"},{"annotations":[91984,107096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019908"},{"annotations":[105217,105057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[104584,89920,87370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005956"},{"annotations":[99326,86095,88353,86464,105165,102209,104664,111299,110993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[102210,108263,109151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of protein serine/threonine kinase activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:18191223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00150":null,"SJAG_00439":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00973":null,"SJAG_00995":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01716":null,"SJAG_01799":null,"SJAG_02057":null,"SJAG_02404":null,"SJAG_02441":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03160":null,"SJAG_03206":null,"SJAG_03421":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03931":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04502":null,"SJAG_04614":null,"SJAG_05017":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serine/threonine protein kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PDR16 complex dimer","type":"related"},{"name":"PDR16 complex homodimer","type":"related"}],"termid":"GO:1902554","terms_by_termid":{"GO:0000307":null,"GO:0005675":null,"GO:0005952":null,"GO:0005956":null,"GO:0019908":null,"GO:0031431":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null,"GO:1990316":null}}


id: GO:0043694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoterpenes, terpenes with a C10 structure.","definition_xrefs":["PMID:25076942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"monoterpene catabolic process","synonyms":[{"name":"monoterpene catabolism","type":"exact"}],"termid":"GO:0043694"}


id: PBO:0057870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-3","termid":"PBO:0057870"}


id: PATO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001142 ig d concentration value (obsolete PATO:0001142)","termid":"PATO:0001142"}


id: PBO:0077328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 64","termid":"PBO:0077328"}


id: SO:0000828
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a nucleus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nuclear_sequence","termid":"SO:0000738"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_chromosome","synonyms":[{"name":"nuclear chromosome","type":"exact"}],"termid":"SO:0000828"}


id: GO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membranous septum morphogenesis","termid":"GO:0003149"}


id: PBO:0054518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1918","termid":"PBO:0054518"}


id: GO:0032528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microvillus organization","synonyms":[{"name":"microvillus organisation","type":"exact"},{"name":"microvillus organization and biogenesis","type":"related"}],"termid":"GO:0032528"}


id: GO:0034139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 3 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 3 signaling pathway","termid":"GO:0034138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 3 signaling pathway","synonyms":[{"name":"regulation of TLR3 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034139"}


id: PBO:0085507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085507"}


id: PBO:0049459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2","termid":"PBO:0049459"}


id: GO:0046870
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93552],"is_not":false,"summary":null,"term":"GO:0046870"}]},"cv_name":"molecular_function","definition":"Binding to a cadmium ion (Cd).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"cadmium ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cd ion binding","type":"exact"},{"name":"cadmium binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0046870","terms_by_termid":{"GO:0046870":null}}


id: MOD:00501
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of a residue with two iodine atoms.","definition_xrefs":["Unimod:130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated residue","termid":"MOD:00755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diiodinated residue","synonyms":[{"name":"Diiodo","type":"related"},{"name":"I2Res","type":"exact"},{"name":"di-Iodination","type":"related"}],"termid":"MOD:00501"}


id: PBO:0016571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mEK 1","termid":"PBO:0016571"}


id: PBO:0064875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 35","termid":"PBO:0064875"}


id: GO:1990217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of phytoalexin production in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21402357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced phytoalexin","termid":"GO:0052165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by symbiont of host phytoalexin production","synonyms":[{"name":"negative regulation by symbiont of host phytoalexin production","type":"exact"}],"termid":"GO:1990217"}


id: MOD:00641
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 334 is merged with Unimod 293. Remap to MOD:00612","definition_xrefs":["Unimod:334"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00641 CAMthiopropanoyl of Lys (obsolete MOD:00641)","termid":"MOD:00641"}


id: GO:0045653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"negatively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of megakaryocyte differentiation","synonyms":[{"name":"down regulation of megakaryocyte differentiation","type":"exact"},{"name":"down-regulation of megakaryocyte differentiation","type":"exact"},{"name":"downregulation of megakaryocyte differentiation","type":"exact"},{"name":"inhibition of megakaryocyte differentiation","type":"narrow"}],"termid":"GO:0045653"}


id: GO:0050892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which nutrients are taken up from the contents of the intestine.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal absorption","termid":"GO:0050892"}


id: PBO:0080347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 111 pseudogene","termid":"PBO:0080347"}


id: MOD:00781
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to N2-acetyl-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N2-acetyl-L-histidine","synonyms":[{"name":"AcHis","type":"exact"}],"termid":"MOD:00781"}


id: GO:0099580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ion antiporter activity, occurring in the postsynaptic membrane, that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"monoatomic ion antiporter activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ion antiporter activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"ion antiporter activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099580"}


id: GO:1902195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isovaleryl-CoA(4-).","definition_xrefs":["PMID:11231285","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006629","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) metabolic process","synonyms":[{"name":"isovaleryl-CoA(4-) metabolism","type":"exact"}],"termid":"GO:1902195"}


id: PBO:0043845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPX chromosome region candidate 1","termid":"PBO:0043845"}


id: GO:0019765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity Fc receptor activity (obsolete GO:0019765)","synonyms":[{"name":"low affinity Fc receptor activity","type":"exact"}],"termid":"GO:0019765"}


id: PBO:0058952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKLN1 antisense RNA","termid":"PBO:0058952"}


id: GO:0002944
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin Kand cyclin-dependent kinase 12 (CDK12). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:22012619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin K-CDK12 complex","synonyms":[{"name":"CycK/Cdk12 complex","type":"related"}],"termid":"GO:0002944"}


id: PBO:0058566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6508","termid":"PBO:0058566"}


id: GO:0099614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported, tethered to or otherwise maintained in a spore cell wall.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to spore cell wall","synonyms":[{"name":"protein targeting to spore cell wall","type":"related"}],"termid":"GO:0099614"}


id: PBO:0038606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 3","termid":"PBO:0038606"}


id: SO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding isoleucyl tRNA (SO:0000263).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine_tRNA_primary_transcript","synonyms":[{"name":"isoleucine tRNA primary transcript","type":"exact"}],"termid":"SO:0000220"}


id: PBO:0085638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in inserting tail-anchored proteins into ER membranes; forms a complex with Get4p; required for efficient mating; involved in shmoo formation and nuclear migration in the pre-zygote; associates with ribosomes","termid":"PBO:0085638"}


id: GO:2000591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"},{"relation_name":"positively_regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"positive regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000591"}


id: MOD:00194
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an amino-terminal lactic acid.","definition_xrefs":["Unimod:403#S","RESID:AA0186","PubMed:7607233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acid","synonyms":[{"name":"(2R)-2-hydroxypropanoic acid","type":"exact"},{"name":"2-hydroxypropionic acid","type":"exact"},{"name":"Lac(Ser)","type":"exact"},{"name":"MOD_RES Lactic acid","type":"exact"},{"name":"Ser->LacticAcid","type":"related"},{"name":"alpha-hydroxypropionic acid","type":"exact"},{"name":"lactic acid","type":"exact"},{"name":"lactic acid from N-term Ser","type":"related"}],"termid":"MOD:00194"}


id: PR:O94645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymocyte nuclear protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03612","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.03c","secondary_identifiers":["UniProtKB:O94645"],"synonyms":[{"name":"Spom972h-THYN1","type":"exact"}],"termid":"PR:O94645"}


id: GO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to epidermal growth factor","synonyms":[{"name":"response to EGF stimulus","type":"exact"},{"name":"response to epidermal growth factor stimulus","type":"exact"}],"termid":"GO:0070849"}


id: PATO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"semi-fertile","termid":"PATO:0001767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female semi-fertile","termid":"PATO:0001760"}


id: GO:1900658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of emericellamide biosynthetic process","synonyms":[{"name":"regulation of emericellamide anabolism","type":"exact"},{"name":"regulation of emericellamide biosynthesis","type":"exact"},{"name":"regulation of emericellamide formation","type":"exact"},{"name":"regulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900658"}


id: PBO:0051319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR10-1 (pseudogene)","termid":"PBO:0051319"}


id: PBO:0041836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 16","termid":"PBO:0041836"}


id: PBO:0043873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 2","termid":"PBO:0043873"}


id: PBO:0091740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA nam1","termid":"PBO:0091740"}


id: PBO:0003439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase (predicted)","termid":"PBO:0003439"}


id: PBO:0000883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit catalytic subunit Sen2 (predicted)","termid":"PBO:0000883"}


id: PBO:0088812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase Mok11","termid":"PBO:0088812"}


id: PBO:0067501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 638, pseudogene","termid":"PBO:0067501"}


id: PBO:0088951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon-exon junction complex disassembly factor, human partner of Y14 and mago ortholog","termid":"PBO:0088951"}


id: GO:0006567
data:
  {"annotated_genes":["SJAG_02450","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90382,99955],"is_not":false,"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine metabolic process","termid":"GO:0006566"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"threonine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THREOCAT-PWY","UM-BBD_pathwayID:met"],"synonyms":[{"name":"threonine catabolism","type":"exact"},{"name":"threonine degradation","type":"exact"},{"name":"threonine breakdown","type":"exact"}],"termid":"GO:0006567","terms_by_termid":{"GO:0006567":null}}


id: PBO:0085089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein that acts as a recycling factor; mediates the nuclear export of Srp1p (importin alpha) back to the cytoplasm after its import substrates have been released into the nucleoplasm, thereby allowing the participation of Srp1p in multiple rounds of nuclear import; required for accurate chromosome segregation; homolog of metazoan CAS and human CSE1L, overexpression of which is implicated in cancer progression","termid":"PBO:0085089"}


id: GO:0090237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"regulates","term_name":"arachidonic acid secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of arachidonic acid secretion","termid":"GO:0090237"}


id: PBO:0054879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2293","termid":"PBO:0054879"}


id: GO:0045962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and increases the rate at which this time point is reached.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of development, heterochronic","synonyms":[{"name":"activation of development, heterochronic","type":"narrow"},{"name":"stimulation of development, heterochronic","type":"narrow"},{"name":"up regulation of development, heterochronic","type":"exact"},{"name":"up-regulation of development, heterochronic","type":"exact"},{"name":"upregulation of development, heterochronic","type":"exact"}],"termid":"GO:0045962"}


id: PBO:0030639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_fructose_carbon_source","termid":"PBO:0030639"}


id: PBO:0058483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5590","termid":"PBO:0058483"}


id: PR:O60141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 94 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.10c","secondary_identifiers":["UniProtKB:O60141"],"synonyms":[{"name":"Spom972h-CCDC94","type":"exact"}],"termid":"PR:O60141"}


id: GO:0019609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxyphenylacetate metabolic process","synonyms":[{"name":"3-hydroxyphenylacetate metabolism","type":"exact"},{"name":"3HPA metabolic process","type":"exact"},{"name":"3HPA metabolism","type":"exact"}],"termid":"GO:0019609"}


id: GO:0008550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. An intrinsic activity of alpha-tubulin involved in tubulin folding, division plane formation in prokaryotic cells and others.","definition_xrefs":["EC:3.6.5.6","MetaCyc:3.6.1.51-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin GTPase activity (obsolete GO:0008550)","synonyms":[{"name":"tubulin GTPase activity","type":"exact"}],"termid":"GO:0008550"}


id: GO:0050107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a monoterpenol = CoA + a monoterpenol acetate ester.","definition_xrefs":["MetaCyc:MONOTERPENOL-O-ACETYLTRANSFERASE-RXN","EC:2.3.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"monoterpenol O-acetyltransferase activity","synonyms":[{"name":"acetyl-CoA:monoterpenol O-acetyltransferase activity","type":"related"},{"name":"menthol transacetylase activity","type":"narrow"}],"termid":"GO:0050107"}


id: GO:0061008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hepaticobiliary system over time, from its formation to the mature structure. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepaticobiliary system development","synonyms":[{"name":"hepatobiliary system development","type":"exact"}],"termid":"GO:0061008"}


id: FYPO:0009081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of potassium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to potassium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to potassium chloride and MMS","type":"exact"},{"name":"resistance to potassium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and MMS in combination","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to potassium chloride and MMS","type":"exact"},{"name":"resistant to potassium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009081"}


id: GO:0120151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring disassembly.","definition_xrefs":["PMID:19109423"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic actomyosin contractile ring disassembly (obsolete GO:0120151)","termid":"GO:0120151"}


id: FYPO:0001636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular glutamine level","synonyms":[{"name":"normal cellular L-glutamine level","type":"exact"},{"name":"normal cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutamine level during vegetative growth","type":"exact"},{"name":"normal level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001636"}


id: PBO:0012274
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP2","termid":"PBO:0012274"}


id: PBO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pH_of_growth_medium","termid":"PBO:0030647"}


id: PATO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being in disarray; extremely disorderly.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disheveled","termid":"PATO:0001605"}


id: GO:0009071
data:
  {"annotated_genes":["SJAG_00830","SJAG_01271","SJAG_03861","SJAG_03641","SJAG_03290","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[83659,84897,109212,92584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[99954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006565"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_01271":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"serine family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid breakdown","type":"exact"},{"name":"serine family amino acid catabolism","type":"exact"},{"name":"serine family amino acid degradation","type":"exact"}],"termid":"GO:0009071","terms_by_termid":{"GO:0006546":null,"GO:0006565":null,"GO:0019464":null}}


id: PR:W6JQK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.07 gene.","definition_xrefs":["UniProtKB:W6JQK2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC651.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.07","synonyms":[{"name":"Spom972h-SPBC651.07","type":"exact"}],"termid":"PR:W6JQK2"}


id: PBO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/TPR/DNAJ domain protein Ucp7","termid":"PBO:0001173"}


id: PBO:0082324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress","termid":"PBO:0082324"}


id: PBO:0083180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YIL100C-A","termid":"PBO:0083180"}


id: PBO:0067318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 404, pseudogene","termid":"PBO:0067318"}


id: GO:1904865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of beta-catenin-TCF complex assembly","termid":"GO:1904863"},{"relation_name":"positively_regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"activation of beta-catenin-TCF complex assembly","type":"narrow"},{"name":"activation of beta-catenin-TCF complex formation","type":"narrow"},{"name":"activation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"activation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"activation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"activation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"positive regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"positive regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"positive regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up-regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up-regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up-regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up-regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"upregulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"upregulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"upregulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"upregulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"upregulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904865"}


id: GO:0045852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH elevation","termid":"GO:0045852"}


id: PBO:0017986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid transmembrane transporter Fnx1","termid":"PBO:0017986"}


id: PBO:0058426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4796","termid":"PBO:0058426"}


id: PBO:0034747
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-translationally cleaved tandem fusion","termid":"PBO:0034747"}


id: GO:0071609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"CCL5 production","type":"exact"},{"name":"RANTES production","type":"exact"},{"name":"Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071609"}


id: PBO:0078542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 34","termid":"PBO:0078542"}


id: PBO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIB","termid":"PBO:0060332"}


id: PBO:0029136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cordycepin","termid":"PBO:0029136"}


id: PBO:0049147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 4","termid":"PBO:0049147"}


id: PBO:0031364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_L-azetidine-2-carboxylic_acid","termid":"PBO:0031364"}


id: PBO:0065152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 5","termid":"PBO:0065152"}


id: PR:O94592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.02","synonyms":[{"name":"Spom972h-SPCC622.02","type":"exact"}],"termid":"PR:O94592"}


id: PBO:0011481
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defect of the gene silencing at centromeric heterochromatin","termid":"PBO:0011481"}


id: PBO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 13A","termid":"PBO:0052364"}


id: PBO:0067565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 718, pseudogene","termid":"PBO:0067565"}


id: GO:0090563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + sugar(out) = protein cysteine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}


id: PBO:0080905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 5","termid":"PBO:0080905"}


id: GO:0033647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, occurring within the host cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host intracellular organelle","termid":"GO:0033647"}


id: PBO:0057594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 924","termid":"PBO:0057594"}


id: GO:0060098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of the plasma membrane that is involved in the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"membrane reorganization involved in phagocytosis, engulfment","synonyms":[{"name":"membrane reorganisation involved in phagocytosis, engulfment","type":"exact"}],"termid":"GO:0060098"}


id: SO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA regions delimited by different nonspurious TSS-TTS pairs.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_unit","synonyms":[{"name":"transcription unit","type":"exact"}],"termid":"SO:0002301"}


id: GO:1900470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:dgf","PMID:8056324","PMID:8614637","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"activation of phosphatidylserine anabolism","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylserine formation","type":"exact"},{"name":"activation of phosphatidylserine synthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine formation","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylserine formation","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylserine formation","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylserine formation","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900470"}


id: PBO:0038330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_exacerbated_by","termid":"PBO:0038330"}


id: GO:0032506
data:
  {"annotated_genes":["SJAG_01732","SJAG_04776","SJAG_03631","SJAG_03596","SJAG_01805","SJAG_01943","SJAG_01894","SJAG_02215","SJAG_04468","SJAG_04509","SJAG_05290","SJAG_01386","SJAG_02592","SJAG_03915","SJAG_01215","SJAG_00883","SJAG_00279","SJAG_02222","SJAG_03704","SJAG_03309","SJAG_02645","SJAG_00268","SJAG_01889","SJAG_03681","SJAG_02831","SJAG_01790","SJAG_02392","SJAG_01787","SJAG_01774","SJAG_05179","SJAG_00845","SJAG_00256","SJAG_00228","SJAG_04982","SJAG_03123","SJAG_04690","SJAG_03592","SJAG_04930","SJAG_01188","SJAG_02838","SJAG_04498","SJAG_00526","SJAG_00442","SJAG_03581","SJAG_00514","SJAG_04666","SJAG_01114","SJAG_04621","SJAG_01143","SJAG_02380","SJAG_02916","SJAG_02864","SJAG_02700","SJAG_01453","SJAG_04358","SJAG_00807","SJAG_04943","SJAG_00082","SJAG_03048","SJAG_03936","SJAG_02169","SJAG_04597","SJAG_03353","SJAG_05285","SJAG_00229","SJAG_00700","SJAG_02514","SJAG_04077","SJAG_02431","SJAG_03379","SJAG_06270","SJAG_03508","SJAG_04703","SJAG_03025","SJAG_04455","SJAG_03342","SJAG_01665","SJAG_03045","SJAG_00938","SJAG_04887","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[104314,94465,85539,94209],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[85937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000917"},{"annotations":[95924,87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"},{"annotations":[73881,108487,98594,113186,114008,93826,114764,108053,115685,94210,114585,84490,91466,88769,88509,95068,93902,88723,97429,94099,104316,98734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94211],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[94212,96865,98595,108488,95069,84491,97097,91467,114009,93827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[115618,92496,105036,84505,106949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[102274,103219,95454,102290,97098,104798,98812,100833,109264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[95831],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010974"},{"annotations":[98539],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[99875],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[98544],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[101202,86928,87910,91825,103721,112065,89023,106358,97440,103410,89104,95751,89643,95832],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[86207,90589],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[90590,83767,106708,90757,109547],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[86970,99878,115619,106951,92035],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[109548,85453,86076,101344,88602,103221,89989,111625,102550,114021],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[88603,83768,90593],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[86211,83769,98557,106709,89993],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[110555,102275],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[77096],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0031991"},{"annotations":[84131,77097,86078,88607,90758],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032955"},{"annotations":[89995,90555,115241],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[84090,97552,107554],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[114022],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111981],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cellular process that is involved in cytokinesis (the division of the cytoplasm of a cell and its separation into two daughter cells).","definition_xrefs":["GOC:isa_complete","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle 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process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:0032506","terms_by_termid":{"GO:0000915":null,"GO:0000917":null,"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031671":null,"GO:0031991":null,"GO:0032955":null,"GO:0061796":null,"GO:0071520":null,"GO:0120306":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: PATO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in a bearer by virtue of the bearer's curving inward.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave","termid":"PATO:0001857"}


id: PBO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual serine/threonine and tyrosine protein kinase","termid":"PBO:0045514"}


id: PBO:0068506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 95, pseudogene","termid":"PBO:0068506"}


id: GO:0045496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the analia of the male over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia development","termid":"GO:0045496"}


id: PBO:0081078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 9","termid":"PBO:0081078"}


id: FYPO:0004177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell of the h- mating type when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:8668157","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation in h- cells","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation in h- cells","type":"related"},{"name":"increased RNA level during nitrogen depletion in h- cells","type":"exact"},{"name":"increased RNA level during nitrogen deprivation in h- cells","type":"exact"},{"name":"increased transcript level during nitrogen starvation in h- cells","type":"exact"}],"termid":"FYPO:0004177"}


id: PR:O74752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mas5 gene.","definition_xrefs":["UniProtKB:O74752","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein import protein mas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.11","synonyms":[{"name":"Spom972h-mas5","type":"exact"}],"termid":"PR:O74752"}


id: GO:0009550
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasmodesma that consists of a simple, single channel; found predominantly in young tissue and formed as a function of cell plate formation during cytokinesis.","definition_xrefs":["PMID:15012255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"primary plasmodesma","synonyms":[{"name":"simple plasmodesma","type":"exact"}],"termid":"GO:0009550"}


id: GO:1904266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell chemotaxis.","definition_xrefs":["PMID:16203995","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"regulates","term_name":"Schwann cell chemotaxis","termid":"GO:1990751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell chemotaxis","termid":"GO:1904266"}


id: PBO:0048727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein","termid":"PBO:0048727"}


id: PBO:0076662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thromboxane A1 receptor","termid":"PBO:0076662"}


id: GO:0000339
data:
  {"annotated_genes":["SJAG_01830","SJAG_04360","SJAG_05010","SJAG_01625","SJAG_04880","SJAG_03223","SJAG_01064","SJAG_00507"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63380,99166],"is_not":false,"summary":null,"term":"GO:0000339"},{"annotations":[87737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098808"},{"annotations":[95934,109662,111535,100929,86112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01064":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null,"SJAG_04880":null,"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"RNA cap binding","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"binding to mRNA cap","type":"narrow"},{"name":"mRNA cap binding","type":"narrow"},{"name":"snRNA cap binding","type":"narrow"}],"termid":"GO:0000339","terms_by_termid":{"GO:0000339":null,"GO:0000340":null,"GO:0098808":null}}


id: PBO:0034292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_eaten_by","termid":"PBO:0034292"}


id: GO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A stable complex of proteins that carry out the DNA damage recognition and incision reactions characteristic of nucleotide excision repair (NER), such as DNA damage recognition, DNA helix unwinding, and endonucleolytic cleavage at sites flanking damaged DNA; includes TFIIH subunits and additional polypeptides; may form in the absence of DNA damage.","definition_xrefs":["PMID:10681587","PMID:9852079"],"gene_count":0,"genotype_count":0,"name":"obsolete repairosome (obsolete GO:0000108)","synonyms":[{"name":"repairosome","type":"exact"}],"termid":"GO:0000108"}


id: PBO:0083519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRPL9/YGR220C","termid":"PBO:0083519"}


id: PBO:0085622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in energy metabolism under respiratory conditions; abundance is increased upon intracellular iron depletion or in response to DNA replication stress; suppresses pro-apoptotic effect of expressing human BAX in yeast cells; RGI1 has a paralog, RGI2, that arose from the whole genome duplication","termid":"PBO:0085622"}


id: GO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gluconapin + a reduced electron acceptor + O2 = xi-progoitrin + an oxidized electron acceptor + H2O.","definition_xrefs":["PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-butenylglucosinolate 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXNQT-4343","RHEA:60628"],"synonyms":[{"name":"But-3-enyl Glucosinolate-2-hydroxylase activity","type":"exact"}],"termid":"GO:0062131"}


id: PR:O14087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rim1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded DNA-binding protein rim1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.04c","synonyms":[{"name":"Spom972h-rim1","type":"exact"},{"name":"mitochondrial ssDNA-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14087"}


id: PBO:0067674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 856, pseudogene","termid":"PBO:0067674"}


id: PBO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pab2 associates with polyadenylated snoRNAs near the polyadenylation site","termid":"PBO:0017010"}


id: PBO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 3, pseudogene","termid":"PBO:0050653"}


id: GO:1905225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["GOC:TermGenie","GOC:sl","GO_REF:0000071","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyrotropin-releasing hormone","synonyms":[{"name":"response to TRH","type":"related"},{"name":"response to protirelin","type":"exact"}],"termid":"GO:1905225"}


id: PBO:0041267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q C chain","termid":"PBO:0041267"}


id: GO:0150103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A neuroinflammatory response, occurring over several days, during which glial cells undergo nonspecific reactive changes in response to damage to the central nervous system (CNS); typically involves the proliferation or hypertrophy of different types of glial cells.","definition_xrefs":["PMID:24462092","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive gliosis","synonyms":[{"name":"gliosis","type":"broad"}],"termid":"GO:0150103"}


id: GO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial inner membrane (obsolete GO:0031304)","synonyms":[{"name":"intrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031304"}


id: GO:1900759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of D-amino-acid oxidase activity","termid":"GO:1900757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of D-amino-acid oxidase activity","synonyms":[{"name":"activation of D-amino-acid oxidase activity","type":"narrow"},{"name":"activation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"activation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"activation of new yellow enzyme","type":"related"},{"name":"positive regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"positive regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"positive regulation of new yellow enzyme","type":"related"},{"name":"up regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up regulation of new yellow enzyme","type":"related"},{"name":"up-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up-regulation of new yellow enzyme","type":"related"},{"name":"upregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"upregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"upregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"upregulation of new yellow enzyme","type":"related"}],"termid":"GO:1900759"}


id: GO:0061692
data:
  {"annotated_genes":["SJAG_04953","SJAG_01216","SJAG_01199","SJAG_04823","SJAG_02515","SJAG_00141"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91374,96158,101206,105015,113508,114405],"is_not":false,"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of hydrogen peroxide in a cell. These include transport of hydrogen peroxide away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of hydrogen peroxide","termid":"GO:0061691"},{"relation_name":"is_a","term_name":"cellular oxidant detoxification","termid":"GO:0098869"},{"relation_name":"part_of","term_name":"cellular response to hydrogen peroxide","termid":"GO:0070301"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061692","terms_by_termid":{"GO:0061692":null}}


id: GO:0050829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-negative bacterium","synonyms":[{"name":"Gram-negative antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-negative bacteria","type":"exact"},{"name":"defence response to Gram-negative bacterium","type":"exact"},{"name":"defense response to Gram-negative bacteria","type":"exact"}],"termid":"GO:0050829"}


id: PBO:0079421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 4","termid":"PBO:0079421"}


id: GO:0052918
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87318],"is_not":false,"summary":null,"term":"GO:0052918"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->6))-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl D-mannosyl phosphate = H+ + alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->6))-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate.","definition_xrefs":["RHEA:29539","EC:2.4.1.261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-5469","KEGG_REACTION:R06261"],"termid":"GO:0052918","terms_by_termid":{"GO:0052918":null}}


id: PBO:0053088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1F","termid":"PBO:0053088"}


id: PBO:0003649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog8 (predicted)","termid":"PBO:0003649"}


id: GO:0032493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipoprotein stimulus.","definition_xrefs":["GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterial lipoprotein","termid":"GO:0032493"}


id: PBO:0080918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 7","termid":"PBO:0080918"}


id: PBO:0066765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 63","termid":"PBO:0066765"}


id: PBO:0077453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 3","termid":"PBO:0077453"}


id: GO:1990905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, flexible, finger-like projection of cytoplasm containing an array of microtubles and located near the flagellar pores in some photosynthetic as well as nonphotosynthetic dinoflagellate species. Its functions are not fully understood, but it has been associated with feeding behavior (phagotrophy).","definition_xrefs":["Wikipedia:Dinoflagellate","GOC:at","PMID:1480107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate peduncle","termid":"GO:1990905"}


id: FYPO:0001194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased beta-glucan level","synonyms":[{"name":"increased beta-D-glucan level","type":"exact"},{"name":"increased beta-glucan accumulation","type":"related"},{"name":"increased beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased beta-glucan level during vegetative growth","type":"exact"},{"name":"increased cellular beta-glucan level","type":"exact"}],"termid":"FYPO:0001194"}


id: GO:0100070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates fatty acid biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete obsolete regulation of fatty acid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100070)","termid":"GO:0100070"}


id: GO:0030752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 5-hydroxyfuranocoumarin = S-adenosyl-L-homocysteine + 5-methoxyfuranocoumarin.","definition_xrefs":["EC:2.1.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"5-hydroxyfuranocoumarin 5-O-methyltransferase activity","secondary_identifiers":["RHEA:11808","GO:0030764","MetaCyc:2.1.1.69-RXN"],"synonyms":[{"name":"BMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:5-hydroxyfuranocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5-hydroxyfurocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:bergaptol O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:bergaptolO-methyltransferase activity","type":"related"},{"name":"bergaptol 5-O-methyltransferase activity","type":"related"},{"name":"bergaptol O-methyltransferase activity","type":"related"},{"name":"bergaptol methyltransferase activity","type":"related"},{"name":"furanocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"furanocoumarin 5-methyltransferase activity","type":"related"}],"termid":"GO:0030752"}


id: PBO:0069534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 804, pseudogene","termid":"PBO:0069534"}


id: PATO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000224 motor function (obsolete PATO:0000224)","termid":"PATO:0000224"}


id: PBO:0069683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 960, pseudogene","termid":"PBO:0069683"}


id: PBO:0052811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 77","termid":"PBO:0052811"}


id: PBO:0085265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxin; required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p; partially redundant with Pex21p; primarily responsible for peroxisomal import during growth on oleate, and expression is induced during oleate growth","termid":"PBO:0085265"}


id: _global:guided_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided_by","termid":"_global:guided_by"}


id: GO:0070933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 deacetylation (obsolete GO:0070933)","termid":"GO:0070933"}


id: PBO:0030489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_succinate_import","termid":"PBO:0030489"}


id: MOD:01098
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a naphthylalanine.","definition_xrefs":["DeltaMass:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naphthylalanine residue","termid":"MOD:01098"}


id: GO:0009762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NADP-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"NADP-malic enzyme C4 photosynthesis","secondary_identifiers":["MetaCyc:PWY-241"],"termid":"GO:0009762"}


id: PBO:0046641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 22","termid":"PBO:0046641"}


id: PBO:0075369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 7","termid":"PBO:0075369"}


id: GO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell.","definition_xrefs":["PMID:22118931","PMID:17009929","GOC:cilia","PMID:20144998","GOC:kmv","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"motile cilium","secondary_identifiers":["GO:0009434","GO:0031512"],"synonyms":[{"name":"microtubule-based flagellum","type":"related"},{"name":"motile cilia","type":"exact"},{"name":"motile primary cilia","type":"related"},{"name":"motile primary cilium","type":"related"},{"name":"motile secondary cilium","type":"related"},{"name":"nodal cilium","type":"related"}],"termid":"GO:0031514"}


id: GO:2000230
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id: RO:0002447
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id: PBO:0050799
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 7","termid":"PBO:0050799"}


id: PBO:0049559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 21","termid":"PBO:0049559"}


id: GO:0071398
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fatty acid","termid":"GO:0071398"}


id: PBO:0051982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 1","termid":"PBO:0051982"}


id: PBO:0045426
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 6","termid":"PBO:0045426"}


id: PBO:0067923
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 225","termid":"PBO:0067923"}


id: PBO:0056650
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 17","termid":"PBO:0056650"}


id: GO:0008047
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id: PBO:0071911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 50","termid":"PBO:0071911"}


id: PBO:0048267
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: PR:Q9Y7N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NARFL that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04806","PRO:DNx","PANTHER:PTHR11615:SF31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor NAR1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.10c","secondary_identifiers":["UniProtKB:Q9Y7N7"],"synonyms":[{"name":"Spom972h-NARFL","type":"exact"},{"name":"nuclear architecture-related protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N7"}


id: PBO:0058618
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6750","termid":"PBO:0058618"}


id: GO:0033865
data:
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id: PBO:0054634
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id: PBO:0026984
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id: GO:1903122
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id: PBO:0015657
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id: GO:0008502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with melatonin, N-acetyl-5-methoxytryptamine, to initiate a change in cell activity. Melatonin is a neuroendocrine substance that stimulates the aggregation of melanosomes in melanophores, thus lightening the skin.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"melatonin receptor activity","termid":"GO:0008502"}


id: PBO:0064198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta enriched 1","termid":"PBO:0064198"}


id: PBO:0087254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits the mitotic exit network (MEN) when the spindle position checkpoint is activated; localized asymmetrically to mother cell cortex, spindle pole body and bud neck; KIN4 has a paralog, FRK1, that arose from the whole genome duplication","termid":"PBO:0087254"}


id: GO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a haptoglobin, any alpha2 globulin of blood plasma that can combine with free oxyhemoglobin to form a stable complex.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"haptoglobin binding","termid":"GO:0031720"}


id: PBO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.4","termid":"PBO:0002639"}


id: PBO:0067190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 252, pseudogene","termid":"PBO:0067190"}


id: PBO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.18","termid":"PBO:0001895"}


id: GO:0033868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + Goodpasture antigen-binding protein = ADP + Goodpasture antigen-binding phosphoprotein.","definition_xrefs":["EC:2.7.11.9"],"gene_count":0,"genotype_count":0,"name":"obsolete Goodpasture-antigen-binding protein kinase activity (obsolete GO:0033868)","secondary_identifiers":["MetaCyc:2.7.11.9-RXN"],"synonyms":[{"name":"ATP:Goodpasture antigen-binding protein phosphotransferase activity","type":"related"},{"name":"GPBP kinase activity","type":"related"},{"name":"GPBPK","type":"related"},{"name":"Goodpasture antigen-binding protein kinase activity","type":"related"},{"name":"STK11","type":"related"}],"termid":"GO:0033868"}


id: SO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding alanyl tRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine_tRNA_primary_transcript","synonyms":[{"name":"alanine tRNA primary transcript","type":"exact"}],"termid":"SO:0000211"}


id: GO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-caffeate + O2 = 3-(2-carboxyethenyl)-cis,cis-muconate + 2 H+.","definition_xrefs":["RHEA:22216","EC:1.13.11.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"caffeate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:CAFFEATE-34-DIOXYGENASE-RXN","KEGG_REACTION:R03365"],"synonyms":[{"name":"3,4-dihydroxy-trans-cinnamate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047762"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: GO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type IV secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052426)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052426"}


id: PATO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000726 autonomic function value (obsolete PATO:0000726)","termid":"PATO:0000726"}


id: PBO:0043111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHUK divergent transcript","termid":"PBO:0043111"}


id: PBO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)","termid":"PBO:0000173"}


id: PBO:0017523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding Yip5 (predicted)","termid":"PBO:0017523"}


id: GO:0033185
data:
  {"annotated_genes":["SJAG_02903","SJAG_00831","SJAG_05219"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92599,99945,102889],"is_not":false,"summary":null,"term":"GO:0033185"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively.","definition_xrefs":["PMID:10835346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00831":null,"SJAG_02903":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dolichol-phosphate-mannose synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPM synthase complex","type":"exact"},{"name":"dolichyl-phosphate beta-D-mannosyltransferase complex","type":"exact"}],"termid":"GO:0033185","terms_by_termid":{"GO:0033185":null}}


id: FYPO:0004121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the import of protein into the nucleus is normal (i.e. indistinguishable from wild type). Import of all proteins or a specific protein may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear import","termid":"FYPO:0000516"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein import into nucleus during vegetative growth","synonyms":[{"name":"normal nucleocytoplasmic protein import during vegetative growth","type":"related"},{"name":"normal protein import into nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004121"}


id: PBO:0027459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rotenone","termid":"PBO:0027459"}


id: PBO:0067056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 77, pseudogene","termid":"PBO:0067056"}


id: PR:Q9UUA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipid phosphatase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02751","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol pyrophosphate phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.18","secondary_identifiers":["UniProtKB:Q9UUA6"],"synonyms":[{"name":"DGPP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PLPP4","type":"exact"},{"name":"phosphatidate phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUA6"}


id: PBO:0066901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 202","termid":"PBO:0066901"}


id: PBO:0030953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation","termid":"PBO:0030953"}


id: SO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region within which self-interaction occurs more often than expected by chance because of DNA-looping.","definition_xrefs":["SO:cb","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_defined_region","synonyms":[{"name":"topologically defined region","type":"exact"}],"termid":"SO:0001412"}


id: PBO:0065479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD14 pseudogene 1","termid":"PBO:0065479"}


id: PBO:0070152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 66 pseudogene","termid":"PBO:0070152"}


id: PBO:0084159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity uridine permease, localizes to the plasma membrane; also mediates low but significant transport of the cytotoxic nucleoside analog 5-fluorouridine; not involved in uracil transport; relative distribution to the vacuole increases upon DNA replication stress","termid":"PBO:0084159"}


id: PBO:0071853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 48","termid":"PBO:0071853"}


id: PBO:0077421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 160","termid":"PBO:0077421"}


id: GO:0060277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stop, prevents or decreases transcription as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0060277)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter during G1 phase of mitotic cell cycle","type":"related"},{"name":"negative regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0060277"}


id: GO:0070279
data:
  {"annotated_genes":["SJAG_04988","SJAG_00830","SJAG_03861","SJAG_03914","SJAG_03306","SJAG_00937","SJAG_03312","SJAG_04145","SJAG_03961","SJAG_02305","SJAG_04678","SJAG_00186","SJAG_04178","SJAG_01019","SJAG_00582","SJAG_05230","SJAG_02972","SJAG_00097","SJAG_02791","SJAG_01766","SJAG_00495","SJAG_03055","SJAG_03671","SJAG_03102","SJAG_00714","SJAG_03434","SJAG_02205","SJAG_04149","SJAG_00432","SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87886,99776,90665,59754,102948,98478,110123,65521,91959,88401,63967,106695,101710,103057,114512,87488,106628,88968,108000,95191,97003,89817,94528,67922,95552,84900,66626,107415,99957,84083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin B6 compound: pyridoxal, pyridoxamine, pyridoxine, or the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin B6 binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0070279","terms_by_termid":{"GO:0030170":null}}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: SO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby two genes, on the same strand have become joined.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_fusion","termid":"SO:0001565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unidirectional_gene_fusion","synonyms":[{"name":"unidirectional gene fusion","type":"exact"}],"termid":"SO:0002085"}


id: PBO:0058207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4500","termid":"PBO:0058207"}


id: PBO:0069489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 756, pseudogene","termid":"PBO:0069489"}


id: GO:0051657
data:
  {"annotated_genes":["SJAG_00053","SJAG_01116","SJAG_03170","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100545,86615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[103202,111367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of organelle location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of organelle localization","type":"related"}],"termid":"GO:0051657","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: PBO:0044761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43 pseudogene 2","termid":"PBO:0044761"}


id: PBO:0089659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-T histone fold, kinetochore scaffold protein","termid":"PBO:0089659"}


id: GO:0007498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm development","termid":"GO:0007498"}


id: FYPO:0006789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 3'-5'-exoribonuclease activity","termid":"FYPO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal poly(A)-specific ribonuclease activity","termid":"FYPO:0006789"}


id: GO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate.","definition_xrefs":["RHEA:22028","EC:2.3.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"taxadien-5-alpha-ol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06307","MetaCyc:2.3.1.162-RXN"],"synonyms":[{"name":"acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl coenzyme A:taxa-4(20),11(12)-dien-5-alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl-CoA:taxa-4(20),11-dien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase activity","type":"related"},{"name":"taxadien-5a-ol O-acetyltransferase activity","type":"exact"},{"name":"taxadien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxadienol acetyltransferase activity","type":"related"}],"termid":"GO:0050638"}


id: PBO:0012829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-absent_during","termid":"PBO:0012829"}


id: GO:0015633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(out) = ADP + phosphate + Zn2+(in).","definition_xrefs":["RHEA:29795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type zinc transporter activity","secondary_identifiers":["MetaCyc:ABC-63-RXN","EC:7.2.2.20"],"synonyms":[{"name":"ATP-dependent zinc transmembrane transporter activity","type":"broad"},{"name":"ATPase-coupled zinc transmembrane transporter activity","type":"broad"},{"name":"zinc porter activity","type":"related"},{"name":"zinc transporting ATPase activity","type":"broad"},{"name":"zinc-transporting ATPase activity","type":"broad"}],"termid":"GO:0015633"}


id: GO:0008712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-D-glycero-D-manno-heptose = ADP-L-glycero-D-manno-heptose.","definition_xrefs":["RHEA:17577","EC:5.1.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"ADP-glyceromanno-heptose 6-epimerase activity","secondary_identifiers":["MetaCyc:5.1.3.20-RXN","KEGG_REACTION:R05176"],"synonyms":[{"name":"ADP-L-glycero-D-manno-heptose 6-epimerase activity","type":"related"},{"name":"ADPglyceromanno-heptose 6-epimerase activity","type":"related"}],"termid":"GO:0008712"}


id: PBO:0041025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family C","termid":"PBO:0041025"}


id: GO:0090644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An innate immune response that is positively correlated with host plant development. As a plant develops, its innate resistance to pathogenic infections increases. The mechanisms involved in age-related resistance differ in nature or in aspects of regulation from the hypersensitive response (HR), systemic acquired resistance (SAR), or induced systemic resistance (ISR).","definition_xrefs":["PMID:19694953","PMID:17635216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"age-related resistance","synonyms":[{"name":"ARR","type":"exact"},{"name":"adult seedling resistance","type":"narrow"},{"name":"developmental resistance","type":"broad"},{"name":"flowering-induced resistance","type":"narrow"},{"name":"mature seedling resistance","type":"narrow"},{"name":"ontogenic resistance","type":"broad"},{"name":"senescence-induced resistance","type":"narrow"}],"termid":"GO:0090644"}


id: GO:1902308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["PMID:11953308","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein dephosphorylation","termid":"GO:0035304"},{"relation_name":"regulates","term_name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-serine dephosphorylation","termid":"GO:1902308"}


id: GO:0070786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"positively_regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"}


id: PBO:0057376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ar","termid":"PBO:0057376"}


id: GO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of neutrophil differentiation","termid":"GO:0045658"},{"relation_name":"positively_regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil differentiation","synonyms":[{"name":"activation of neutrophil differentiation","type":"narrow"},{"name":"stimulation of neutrophil differentiation","type":"narrow"},{"name":"up regulation of neutrophil differentiation","type":"exact"},{"name":"up-regulation of neutrophil differentiation","type":"exact"},{"name":"upregulation of neutrophil differentiation","type":"exact"}],"termid":"GO:0045660"}


id: GO:0016163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP + 16 H2O = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["PMID:15382920","RHEA:21448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor","termid":"GO:0016732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitrogenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0395","MetaCyc:NITROGENASE-RXN","EC:1.18.6.1"],"synonyms":[{"name":"iron-iron nitrogenase activity","type":"narrow"},{"name":"molybdenum-iron nitrogenase activity","type":"narrow"},{"name":"reduced ferredoxin:dinitrogen oxidoreductase (ATP-hydrolysing) activity","type":"related"},{"name":"vanadium-iron nitrogenase activity","type":"narrow"}],"termid":"GO:0016163"}


id: FYPO:0006287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during cellular response to hydroxyurea (obsolete FYPO:0006287)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to HU","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein tyrosine phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006287"}


id: PBO:0070266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 1","termid":"PBO:0070266"}


id: PBO:0086140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for modification of wobble nucleosides in tRNA; acts with Elongator complex, Kti11p, and Kti12p; has a potential role in regulatory interactions between microtubules and the cell cycle; forms a stable heterodimer with Kti11p","termid":"PBO:0086140"}


id: PBO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 32","termid":"PBO:0072101"}


id: PR:O14227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent RNA polymerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.09","synonyms":[{"name":"Spom972h-rdp1","type":"exact"},{"name":"protein rdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14227"}


id: PATO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the tongue.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved lingually","termid":"PATO:0005019"}


id: GO:0071108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K48-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K48-linked deubiquitination","termid":"GO:0071108"}


id: PBO:0012246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dos2 silencing complex subunit Mms19","termid":"PBO:0012246"}


id: FYPO:0006945
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02763:allele-6":{"allele_type":"amino_acid_mutation","description":"S499A; S538A; T620A; T638A; S651A","gene_uniquename":"SJAG_02763","name":"ned1-5A","synonyms":[{"name":"refractory to potential proline-directed kinase phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-6"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115416,115423],"is_not":false,"summary":null,"term":"FYPO:0006945"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"lipid droplets present in decreased numbers","termid":"FYPO:0002552"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5A(S499A; S538A; T620A; T638A; S651A aa)","display_uniquename":"ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-6","expression":"Not assayed or wild type"}]}]},"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased lipid droplet formation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased lipid droplet assembly","type":"exact"},{"name":"increased lipid particle formation","type":"exact"}],"termid":"FYPO:0006945","terms_by_termid":{"FYPO:0006945":null,"FYPO_EXT:0000001":null}}


id: PBO:0057409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548k","termid":"PBO:0057409"}


id: PBO:0028986
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-overlapping_meiosis_I_spindles","termid":"PBO:0028986"}


id: PBO:0048943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 1","termid":"PBO:0048943"}


id: GO:0102527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-amino-4,7-dihydroxycoumarin + 3-dimethylallyl-4-hydroxybenzoate + ATP(4-) = H+ + 8-desmethylnovobiocic acid(1-) + AMP(2-) + diphosphoric acid.","definition_xrefs":["EC:6.3.1.15","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"8-demethylnovobiocate synthase activity","secondary_identifiers":["MetaCyc:RXN-14547","RHEA:36699"],"termid":"GO:0102527"}


id: PBO:0078809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 26-1","termid":"PBO:0078809"}


id: GO:0097571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the left side of the cell when viewed from the dorsal side.","definition_xrefs":["GOC:giardia","ISBN:0-444-81258-X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"left nucleus","termid":"GO:0097571"}


id: PR:Q10217
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl carrier protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20863:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl carrier protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.09","secondary_identifiers":["UniProtKB:Q10217"],"synonyms":[{"name":"ACP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDUFAB1","type":"exact"}],"termid":"PR:Q10217"}


id: PBO:0075027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-38","termid":"PBO:0075027"}


id: GO:0046424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferulic acid + NADPH + H+ + O2 = 5-hydroxyferulic acid + H2O + NADP+.","definition_xrefs":["PMID:8692910","PMID:9880351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ferulate 5-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-1121"],"termid":"GO:0046424"}


id: PBO:0001005
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPAF2 deficiency","termid":"PBO:0001005"}


id: GO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-histidine amide by hydrolysis and oxidation of an interior His-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0089"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-histidine amidation (obsolete GO:0018042)","termid":"GO:0018042"}


id: GO:0016183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of clathrin coated pits in the presynaptic membrane endocytic zone, triggered by the presence of high concentrations of synaptic vesicle components. This process leads to, but does not include budding of the membrane to form new vesicles.","definition_xrefs":["GOC:curators","PMID:10099709","PMID:20448150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coating","termid":"GO:0006901"},{"relation_name":"part_of","term_name":"synaptic vesicle budding from presynaptic endocytic zone membrane","termid":"GO:0016185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle coating","termid":"GO:0016183"}


id: PBO:0069609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 886, pseudogene","termid":"PBO:0069609"}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: PBO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_neddylation","termid":"PBO:0035892"}


id: GO:0072301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"}


id: GO:0071659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of IP-10.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of IP-10 production","termid":"GO:0071658"},{"relation_name":"negatively_regulates","term_name":"IP-10 production","termid":"GO:0071612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of IP-10 production","synonyms":[{"name":"negative regulation of CXCL10 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071659"}


id: FYPO:0000687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000687"}


id: GO:0045316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of compound eye photoreceptor development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of eye photoreceptor cell development","termid":"GO:0042480"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor development","termid":"GO:0045314"},{"relation_name":"negatively_regulates","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye photoreceptor development","synonyms":[{"name":"down regulation of eye photoreceptor development","type":"broad"},{"name":"down-regulation of eye photoreceptor development","type":"broad"},{"name":"downregulation of eye photoreceptor development","type":"broad"},{"name":"inhibition of eye photoreceptor development","type":"broad"},{"name":"negative regulation of eye photoreceptor development","type":"broad"}],"termid":"GO:0045316"}


id: GO:0006756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into AMP, adenosine monophosphate, to produce ADP. Addition of two phosphate groups produces ATP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP biosynthetic process","termid":"GO:0006754"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"},{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"AMP phosphorylation","termid":"GO:0006756"}


id: GO:0140794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone 3 L-arginyl = histone 3 L-citrullyl + NH4+, resulting in histone citrullination.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine deiminase activity","termid":"GO:0004668"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone arginine deiminase activity","synonyms":[{"name":"histone citrullination","type":"related"},{"name":"histone-arginine deiminase activity","type":"exact"}],"termid":"GO:0140794"}


id: GO:0051414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisol stimulus. Cortisol is the major natural glucocorticoid synthesized in the zona fasciculata of the adrenal cortex; it affects the metabolism of glucose, protein, and fats and has appreciable mineralocorticoid activity. It also regulates the immune system and affects many other functions.","definition_xrefs":["ISBN:0721662544","PMID:11276391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cortisol","synonyms":[{"name":"response to cortisol stimulus","type":"exact"},{"name":"response to hydrocortisone stimulus","type":"exact"}],"termid":"GO:0051414"}


id: GO:0008742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ribulose 5-phosphate = D-xylulose 5-phosphate.","definition_xrefs":["RHEA:22368","EC:5.1.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"L-ribulose-phosphate 4-epimerase activity","secondary_identifiers":["KEGG_REACTION:R05850","MetaCyc:RIBULPEPIM-RXN"],"synonyms":[{"name":"AraD","type":"related"},{"name":"L-Ru5P","type":"related"},{"name":"L-ribulose 5-phosphate 4-epimerase activity","type":"related"},{"name":"L-ribulose-5-phosphate 4-epimerase","type":"broad"},{"name":"L-ru5P activity","type":"related"},{"name":"phosphoribulose isomerase activity","type":"related"},{"name":"ribulose phosphate 4-epimerase activity","type":"related"}],"termid":"GO:0008742"}


id: GO:0015960
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine polyphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate anabolism","type":"exact"},{"name":"diadenosine polyphosphate biosynthesis","type":"exact"},{"name":"diadenosine polyphosphate formation","type":"exact"},{"name":"diadenosine polyphosphate synthesis","type":"exact"}],"termid":"GO:0015960","terms_by_termid":{"GO:0015966":null}}


id: PBO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPAse with a role in RNA polymerase localization (predicted)","termid":"PBO:0017837"}


id: FYPO:0004620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spindle disassembly is abnormal. Spindle disassembly is the controlled breakdown of the spindle.","definition_xrefs":["PomBase:mah","GO:0051230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle disassembly","termid":"FYPO:0004620"}


id: PBO:0053305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28A pseudogene 2","termid":"PBO:0053305"}


id: GO:0009837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fruit ripening process that does not involve a respiratory burst.","definition_xrefs":["GOC:lr","ISBN:0521587840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit ripening, non-climacteric","termid":"GO:0009837"}


id: SO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a repeat, interrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"nested_repeat","termid":"SO:0001649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_fragment","synonyms":[{"name":"repeat fragment","type":"exact"}],"termid":"SO:0001050"}


id: GO:0042845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycol, a diol in which the two hydroxy groups are on different carbon atoms, usually but not necessarily adjacent.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycol biosynthetic process","synonyms":[{"name":"dihydric alcohol biosynthesis","type":"broad"},{"name":"dihydric alcohol biosynthetic process","type":"broad"},{"name":"glycol anabolism","type":"exact"},{"name":"glycol biosynthesis","type":"exact"},{"name":"glycol formation","type":"exact"},{"name":"glycol synthesis","type":"exact"}],"termid":"GO:0042845"}


id: GO:0075042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of turgor in appressorium (obsolete GO:0075042)","termid":"GO:0075042"}


id: PBO:0039623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A6","termid":"PBO:0039623"}


id: GO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of zinc ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to zinc ion starvation","termid":"GO:0120127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion starvation","synonyms":[{"name":"cellular response to zinc ion limitation","type":"exact"},{"name":"cellular response to zinc starvation","type":"exact"}],"termid":"GO:0034224"}


id: GO:1990062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex first characterized in human and comprised of a R2TP module (R2TP complex), a prefoldin-like module (containing both prefoldin-like proteins and canonical prefoldins), WD40 repeat protein Monad/WDR92 and DNA-dependent RNA polymerase subunit RPB5. This complex might have chaperone activity.","definition_xrefs":["GOC:pr","PMID:21925213","PMID:20453924","PMID:22418846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RPAP3/R2TP/prefoldin-like complex","synonyms":[{"name":"R2TP/prefoldin-like complex","type":"related"}],"termid":"GO:1990062"}


id: PR:Q10075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione gamma-glutamylcysteinyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.10","synonyms":[{"name":"Spom972h-pcs2","type":"exact"},{"name":"phytochelatin synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10075"}


id: GO:0018398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-3'-bromophenylalanine.","definition_xrefs":["RESID:AA0175"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-3'-bromophenylalanine (obsolete GO:0018398)","termid":"GO:0018398"}


id: SO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between +20 and +30 relative to the TSS. Consensus sequence is CSARCSSAACGS. Tends to co-occur with INR motif (SO:0000014). Tends to not occur with DPE motif (SO:0000015) or DMv5 (SO:0001159).","definition_xrefs":["PMID:16858867","PMID:12537576:15231738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTE","synonyms":[{"name":"CSARCSSAACGS","type":"narrow"},{"name":"motif ten element","type":"exact"},{"name":"motif_ten_element","type":"exact"}],"termid":"SO:0001162"}


id: PR:O94617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uap1 gene.","definition_xrefs":["UniProtKB:O94617","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.08","synonyms":[{"name":"Spom972h-uap1","type":"exact"}],"termid":"PR:O94617"}


id: PBO:0028548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0028548"}


id: PBO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-compact myelin associated protein","termid":"PBO:0060636"}


id: GO:0160165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of CD8-positive alpha-beta T cells such that the total number of CD8-positive alpha-beta T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:33815406","PMID:30650357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell homeostasis","synonyms":[{"name":"CD8+ T cell homeostasis","type":"broad"},{"name":"CD8-positive T cell homeostasis","type":"broad"}],"termid":"GO:0160165"}


id: PBO:0066119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 12","termid":"PBO:0066119"}


id: GO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining a protein in an unfolded, soluble state.","definition_xrefs":["PMID:21636303","GOC:bf","GOC:BHF","GOC:nc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of unfolded protein","termid":"GO:0036506"}


id: GO:0032167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An amorphous-appearing accumulation of septin proteins at the future site of cytokinesis.","definition_xrefs":["PMID:16009555"],"gene_count":0,"genotype_count":0,"name":"obsolete septin patch (obsolete GO:0032167)","synonyms":[{"name":"septin patch","type":"exact"}],"termid":"GO:0032167"}


id: GO:1903671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16756958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"negatively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sprouting angiogenesis","synonyms":[{"name":"down regulation of sprouting angiogenesis","type":"exact"},{"name":"down-regulation of sprouting angiogenesis","type":"exact"},{"name":"downregulation of sprouting angiogenesis","type":"exact"},{"name":"inhibition of sprouting angiogenesis","type":"narrow"}],"termid":"GO:1903671"}


id: MOD:01792
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal O4'-phospho-L-tyrosine residue to tyrosine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O4'-phospho-L-tyrosine","termid":"MOD:00048"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosine immonium ion","synonyms":[{"name":"2-(4-phosphonoxyphenyl)ethaniminium","type":"exact"}],"termid":"MOD:01792"}


id: PBO:0067398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 504, pseudogene","termid":"PBO:0067398"}


id: PBO:0038930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRL3 antisense RNA 1","termid":"PBO:0038930"}


id: GO:1901539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene metabolic process","synonyms":[{"name":"ent-pimara-8(14),15-diene metabolism","type":"exact"}],"termid":"GO:1901539"}


id: PBO:0049680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HADHB pseudogene 1","termid":"PBO:0049680"}


id: PBO:0062340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily F member 1","termid":"PBO:0062340"}


id: PBO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 27","termid":"PBO:0042166"}


id: PATO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being turned inward upon itself.","definition_xrefs":["die.net:die.net"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"introverted","termid":"PATO:0001856"}


id: GO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of pancreatic B cells, resulting in the expansion of an pancreatic B cell population. Pancreatic B cell are cells of the pancreas that secrete insulin.","definition_xrefs":["GOC:jl","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell proliferation","synonyms":[{"name":"pancreatic B cell proliferation","type":"exact"},{"name":"pancreatic beta cell proliferation","type":"exact"}],"termid":"GO:0044342"}


id: FYPO:0001779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is abnormal. Centromere-kinetochore complexes normally cluster near the old spindle pole body during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere localization","termid":"FYPO:0001778"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal centromere clustering at nuclear periphery","secondary_identifiers":["FYPO:0001780"],"synonyms":[{"name":"abnormal centromere clustering at SPB","type":"related"},{"name":"abnormal centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal centromere clustering at nuclear periphery during mitotic cell cycle","type":"exact"},{"name":"abnormal centromere clustering at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal centromere clustering at old mitotic spindle pole body","type":"related"},{"name":"abnormal centromere clustering at spindle pole body","type":"related"},{"name":"abnormal centromere-SPB clustering","type":"related"},{"name":"abnormal kinetochore clustering at SPB","type":"related"},{"name":"abnormal kinetochore clustering at old mitotic spindle pole body","type":"related"},{"name":"abnormal kinetochore clustering at spindle pole body","type":"related"},{"name":"abnormal kinetochore localization at spindle pole body","type":"related"},{"name":"abnormal kinetochores to spindle pole body clustering","type":"related"},{"name":"abnormal mitotic centromere clustering at nuclear periphery","type":"exact"},{"name":"mislocalized, scattered centromeres","type":"related"},{"name":"unclustered kinetochores","type":"related"}],"termid":"FYPO:0001779"}


id: GO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis where the methylase specifies the site that becomes methylated without using a guide RNA.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme-directed rRNA 2'-O-methylation (obsolete GO:0000453)","termid":"GO:0000453"}


id: PBO:0034408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes_to_(obsolete_localizes_to)","termid":"PBO:0034408"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: PBO:0048028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous sheath CABYR binding protein","termid":"PBO:0048028"}


id: PBO:0065758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin and HIN domain family member 1","termid":"PBO:0065758"}


id: GO:0048626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a myoblast in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate specification","termid":"GO:0048626"}


id: GO:0033565
data:
  {"annotated_genes":["SJAG_00821","SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87676,101133],"is_not":false,"summary":null,"term":"GO:0033565"}]},"cv_name":"cellular_component","definition":"A protein complex required for the recycling of Golgi proteins, formation of lumenal membranes and sorting of ubiquitinated proteins into those membranes. This complex includes Vps1p and Hse1p in yeast and the Hrs and STAM proteins in mammals.","definition_xrefs":["GOC:rb","PMID:12055639","PMID:17543868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00821":null,"SJAG_03250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005768","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"ESCRT-0 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Hrs/STAM complex","type":"exact"},{"name":"Vps27p-Hse1p complex","type":"exact"}],"termid":"GO:0033565","terms_by_termid":{"GO:0033565":null}}


id: PBO:0067943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 245","termid":"PBO:0067943"}


id: PBO:0055642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3081","termid":"PBO:0055642"}


id: _global:occurs_at
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_at","secondary_identifiers":["GOREL:0000501"],"termid":"_global:occurs_at"}


id: PBO:0014590
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rrm-containing protein, isolated from a synthetic lethal Mutant with Nab2","termid":"PBO:0014590"}


id: GO:0019686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleoside is synthesized from another purine nucleoside.","definition_xrefs":["ISBN:0306444747","GOC:mah","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside interconversion","termid":"GO:0019686"}


id: PR:C6Y4B1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC20G4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20G4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.09","synonyms":[{"name":"Spom972h-SPAC20G4.09","type":"exact"}],"termid":"PR:C6Y4B1"}


id: PBO:0031481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation","termid":"PBO:0031481"}


id: PBO:0029660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029660"}


id: PBO:0068989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 233, pseudogene","termid":"PBO:0068989"}


id: PBO:0062092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 42 pseudogene","termid":"PBO:0062092"}


id: PBO:0048626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 2","termid":"PBO:0048626"}


id: PBO:0067677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 862, pseudogene","termid":"PBO:0067677"}


id: GO:0150054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic neurotransmitter receptor diffusion trapping.","definition_xrefs":["PMID:20935643","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0150054"}


id: GO:0006557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S-adenosylmethioninamine, (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt.","definition_xrefs":["MetaCyc:S-ADENOSYLMETHIONINAMINE","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethioninamine biosynthetic process (obsolete GO:0006557)","synonyms":[{"name":"S-adenosylmethioninamine anabolism","type":"exact"},{"name":"S-adenosylmethioninamine biosynthesis","type":"exact"},{"name":"S-adenosylmethioninamine formation","type":"exact"},{"name":"S-adenosylmethioninamine synthesis","type":"exact"}],"termid":"GO:0006557"}


id: PBO:0055114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2533","termid":"PBO:0055114"}


id: PBO:0027992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027992"}


id: GO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus is received by a cell and converted into a molecular signal; cAMP is the nucleotide cyclic AMP.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to cAMP","termid":"GO:0051591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cAMP","synonyms":[{"name":"3',5'-cAMP detection","type":"exact"},{"name":"3',5'-cAMP sensing","type":"exact"},{"name":"cAMP detection","type":"exact"},{"name":"cAMP sensing","type":"exact"},{"name":"cyclic AMP detection","type":"exact"},{"name":"detection of 3',5' cAMP","type":"exact"},{"name":"detection of 3',5'-cAMP","type":"exact"},{"name":"detection of adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"detection of cyclic AMP","type":"exact"}],"termid":"GO:0031319"}


id: FYPO:0003352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which DNA double-strand break formation occurs to a lower extent than normal during gene conversion at the mating-type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased mating type switching","termid":"FYPO:0000470"},{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"decreased DNA double-strand break formation at mating-type locus","synonyms":[{"name":"decreased DNA double-strand break formation at mating-type locus during gene conversion","type":"exact"},{"name":"decreased DNA double-strand break formation at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased DNA double-strand break formation at mating-type locus during vegetative growth","type":"exact"},{"name":"decreased DNA double-strand break formation during gene conversion at mating-type locus","type":"exact"},{"name":"decreased DSB formation at mat1","type":"exact"},{"name":"decreased DSB formation at mating-type locus","type":"exact"},{"name":"decreased DSB formation proximal to mat1","type":"exact"},{"name":"decreased gene conversion at mating-type locus, DNA double-strand break formation","type":"exact"},{"name":"reduced DNA double-strand break formation at mating-type locus","type":"exact"}],"termid":"FYPO:0003352"}


id: PBO:0062863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase, ubiquitin aldehyde binding 2","termid":"PBO:0062863"}


id: PBO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 1","termid":"PBO:0072730"}


id: PBO:0048054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 3","termid":"PBO:0048054"}


id: GO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process.","definition_xrefs":["PMID:9891807","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent telomere shortening (obsolete GO:0001309)","synonyms":[{"name":"age-dependent telomere shortening","type":"exact"}],"termid":"GO:0001309"}


id: GO:0060462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung lobe from an initial condition to its mature state. This process begins with the formation of a lung lobe by branching morphogenesis and ends with the mature structure. A lung lobe is one of the rounded projections that compose the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe development","termid":"GO:0060462"}


id: GO:0071003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U1, U2, U4/U6 and U5 small nuclear ribonucleoproteins.","definition_xrefs":["GOC:krc","GOC:mah","PMID:11804584","PMID:12724403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"penta-snRNP complex","synonyms":[{"name":"penta-RNP complex","type":"exact"}],"termid":"GO:0071003"}


id: PATO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in the young of an animal by virtue of their number.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brood quality","termid":"PATO:0001496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brood size","synonyms":[{"name":"litter size","type":"related"}],"termid":"PATO:0000276"}


id: PBO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2,A","termid":"PBO:0001795"}


id: PBO:0040350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g","termid":"PBO:0040350"}


id: PBO:0056551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCL1 apoptosis regulator, BCL2 family member","termid":"PBO:0056551"}


id: PBO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFL2 antisense RNA 1","termid":"PBO:0051034"}


id: PBO:0057347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 542","termid":"PBO:0057347"}


id: PBO:0063662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGAM family member 5, mitochondrial serine/threonine protein phosphatase","termid":"PBO:0063662"}


id: PBO:0085346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; hydrolyzes phosphatidylinositol and phosphatidylserine and displays transacylase activity in vitro; PLB3 has a paralog, PLB1, that arose from the whole genome duplication","termid":"PBO:0085346"}


id: PBO:0040616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1 pseudogene 1","termid":"PBO:0040616"}


id: GO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthiopentyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 5-methylthiopentyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4330"],"termid":"GO:0080068"}


id: PBO:0086468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial inner membrane transporter; proposed role in oleate metabolism and glutamate biosynthesis; member of the mitochondrial carrier (MCF) family; YMC2 has a paralog, YMC1, that arose from the whole genome duplication","termid":"PBO:0086468"}


id: PBO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualifier","termid":"PBO:0000049"}


id: PBO:0091966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb5","termid":"PBO:0091966"}


id: FYPO:0007366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2,3-bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular bisphosphoglyceric acid level","termid":"FYPO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular 2,3-bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular 2,3-bisphosphoglycerate level","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular 2-/3-bisphosphoglyceric acid level","type":"exact"},{"name":"decreased level of 2,3-bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular 2,3-bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0007366"}


id: PBO:0086269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein translocase and chaperone required for Complex III assembly; member of the AAA ATPase family; forms a homo-oligomeric complex in the mitochondrial inner membrane that translocates the C-terminal domain of Rip1p from the matrix across the inner membrane and delivers it to an assembly intermediate of respiratory Complex III; also required for assembly of the Qcr10p subunit; mutation is functionally complemented by human homolog BCS1L, linked to neonatal diseases","termid":"PBO:0086269"}


id: GO:0019669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"anaerobic glycine catabolic process","synonyms":[{"name":"glycine fermentation","type":"exact"}],"termid":"GO:0019669"}


id: PBO:0081255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 25","termid":"PBO:0081255"}


id: FYPO:0001114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to M-factor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to pheromone","termid":"FYPO:0001113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to M-factor","termid":"FYPO:0001114"}


id: PBO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase 2","termid":"PBO:0048722"}


id: PBO:0050853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 5","termid":"PBO:0050853"}


id: GO:0061680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate and yields pyruvate and D-glyceraldehyde.","definition_xrefs":["GOC:dph","PMID:12921536","MetaCyc:ENTNER-DOUDOROFF-PWY-II"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway through gluconate","termid":"GO:0061679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate to D-glyceraldehyde","secondary_identifiers":["MetaCyc:NPGLUCAT-PWY"],"termid":"GO:0061680"}


id: PR:O94283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-derived vesicles protein 41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.04c","synonyms":[{"name":"Spom972h-erv41","type":"exact"}],"termid":"PR:O94283"}


id: PBO:0086215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to Fpr1p; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1","termid":"PBO:0086215"}


id: PBO:0087603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CCR4-NOT1 core complex; this complex has multiple roles in the regulation of mRNA levels including regulation of transcription and destabilization of mRNA by deadenylation; basal transcription factor that increases initiation and elongation; activates the ATPase activity of Dhh1p, resulting in processing body disassembly","termid":"PBO:0087603"}


id: PBO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"with","termid":"PBO:0000098"}


id: PBO:0064136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 3","termid":"PBO:0064136"}


id: GO:0034486
data:
  {"annotated_genes":["SJAG_00051","SJAG_03899","SJAG_03400","SJAG_01344","SJAG_05213","SJAG_01990","SJAG_02029","SJAG_04725","SJAG_03256","SJAG_03497","SJAG_04698","SJAG_03401","SJAG_00877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86604,101868],"is_not":false,"summary":null,"term":"GO:0034486"},{"annotations":[92208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[100009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032975"},{"annotations":[98973,106208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[86602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[114319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[111716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[93233,114321,92251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[93539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[100010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[100012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[93540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[100013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[98975,100014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[93541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[106210,100015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[100016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[100017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[92252,93234,114322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[114323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071995"},{"annotations":[110513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The process in which a solute is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01344":null,"SJAG_01990":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03497":null,"SJAG_03899":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vacuolar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane transport","type":"exact"}],"termid":"GO:0034486","terms_by_termid":{"GO:0032974":null,"GO:0032975":null,"GO:0034486":null,"GO:0034488":null,"GO:0034490":null,"GO:0036246":null,"GO:0036249":null,"GO:0071995":null,"GO:0071996":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0140146":null,"GO:0140147":null,"GO:1901482":null,"GO:1990591":null,"GO:1990818":null}}


id: PBO:0029105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_valine_level","termid":"PBO:0029105"}


id: GO:1901960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isobutanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:22224870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"isobutanol metabolic process","synonyms":[{"name":"isobutanol metabolism","type":"exact"}],"termid":"GO:1901960"}


id: GO:0048183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits (sometimes known as activin beta or activin/inhibin beta), inhibin beta-A and inhibin beta-B.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"activin AB complex","synonyms":[{"name":"inhibin beta-A","type":"narrow"},{"name":"inhibin beta-B","type":"narrow"}],"termid":"GO:0048183"}


id: PBO:0050828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylysine kinase","termid":"PBO:0050828"}


id: GO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme B production","termid":"GO:0071661"},{"relation_name":"positively_regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of granzyme B production","termid":"GO:0071663"}


id: FYPO:0001764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C48, C49, C60, C61 and C62 residues in a tRNA-Asp molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation","synonyms":[{"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA-Asp C48, C49, C60, C61 and C62 methylation during vegetative growth","type":"exact"},{"name":"normal tRNA-Asp methylation on C48, C49, C60, C61 and C62","type":"exact"}],"termid":"FYPO:0001764"}


id: PBO:0049994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 1","termid":"PBO:0049994"}


id: GO:0007536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of recombination at a mating type locus, such that it is used in preference to the other donor locus for mating type switching; exemplified by the HML locus and surrounding sequences on Chromosome III in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah","PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"donor selection","termid":"GO:0007535"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"activation of recombination (HML)","termid":"GO:0007536"}


id: PBO:0075912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 4","termid":"PBO:0075912"}


id: GO:1990453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the disassembly and subsequent reassembly of nucleosomes. It associates with the coding region of transcriptionally active genes where it interacts with the RNA polymerase II and affects its processivity during co-transcriptional RNA processing and maturation. It exists as a functionally independent part of the NuA4 complex.","definition_xrefs":["GOC:bhm","PMID:24843044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleosome disassembly/reassembly complex","synonyms":[{"name":"eaf5/7/3 complex","type":"narrow"}],"termid":"GO:1990453"}


id: PBO:0053173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA enhancing IL-6/STAT3 signaling activation 1","termid":"PBO:0053173"}


id: PBO:0083909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone oxidoreductase; induced by oxidative stress in a Yap1p dependent manner; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; PST2 has a paralog, RFS1, that arose from the whole genome duplication","termid":"PBO:0083909"}


id: GO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a receptor binding to extracellular adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled purinergic receptor signaling pathway","termid":"GO:0035588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled adenosine receptor signaling pathway","synonyms":[{"name":"P1 receptor signaling pathway","type":"exact"},{"name":"adenosine receptor signaling pathway","type":"related"},{"name":"adenosine receptor signaling pathway, G-protein coupled","type":"exact"},{"name":"adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0001973"}


id: PBO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-tetrakisphosphate 1-kinase","termid":"PBO:0051944"}


id: GO:1903948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of atrial cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:25281747","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"},{"relation_name":"negatively_regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of atrial cardiac muscle cell action potential","synonyms":[{"name":"down regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of atrial cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1903948"}


id: GO:1990788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein repressing GLI's transcription factor activity when SMO signaling is inactive. Upon ligand binding to the upstream receptor PTC (Patched) GLI dissociates from SUFU and activates transcription of hedgehog-target genes. In mammals it consists of SUFU and one of the GLI family proteins.","definition_xrefs":["GOC:bhm","PMID:24311597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"GLI-SUFU complex","termid":"GO:1990788"}


id: PBO:0086489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1","termid":"PBO:0086489"}


id: PBO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1 (predicted)","termid":"PBO:0005324"}


id: PBO:0077844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 3","termid":"PBO:0077844"}


id: PBO:0083251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by homology to a hemiascomycetous yeast protein","termid":"PBO:0083251"}


id: GO:0009782
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The antenna complex of photosystem I. A photosystem has two closely linked components, an antenna containing light-absorbing pigments and a reaction center. Each antenna contains one or more light-harvesting complexes (LHCs).","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem I","termid":"GO:0009522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem I antenna complex","termid":"GO:0009782"}


id: GO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"secondary metabolite catabolic process","synonyms":[{"name":"secondary metabolite breakdown","type":"exact"},{"name":"secondary metabolite catabolism","type":"exact"},{"name":"secondary metabolite degradation","type":"exact"}],"termid":"GO:0090487"}


id: FYPO:0009067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amorolfine. Cells stop growing (and may die) at a concentration of amorolfine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to amorolfine","synonyms":[{"name":"hypersensitive to amorolfine","type":"exact"},{"name":"sensitive to amorolfine during mitotic cell cycle","type":"related"},{"name":"sensitive to amorolfine during vegetative growth","type":"exact"}],"termid":"FYPO:0009067"}


id: PBO:0041689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 2","termid":"PBO:0041689"}


id: PBO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med20","termid":"PBO:0001507"}


id: PBO:0075362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX2 overlapping transcript","termid":"PBO:0075362"}


id: PBO:0087845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC1 RNA-associated factor involved in telomere length regulation; recruitment subunit of telomerase; has G-quadruplex promoting activity required for telomere elongation; role in activating telomere-bound Est2p-TLC1-RNA; EST1 has a paralog, EBS1, that arose from the whole genome duplication","termid":"PBO:0087845"}


id: GO:0031749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a D2 dopamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine receptor binding","termid":"GO:0050780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"D2 dopamine receptor binding","synonyms":[{"name":"D2 dopamine receptor ligand","type":"narrow"}],"termid":"GO:0031749"}


id: SO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide sequence of a virus that infects bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phage_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Bacteriophage"],"synonyms":[{"name":"bacteriophage","type":"exact"},{"name":"phage","type":"exact"},{"name":"phage sequence","type":"exact"}],"termid":"SO:0001042"}


id: PBO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p23 homolog, predicted co-chaperone Wos2","termid":"PBO:0002530"}


id: PBO:0069682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 959, pseudogene","termid":"PBO:0069682"}


id: PBO:0046498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERH pseudogene 1","termid":"PBO:0046498"}


id: GO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-D-glucoside + UDP-L-rhamnose = flavonol 3-O-L-rhamnosylglucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.159-RXN","EC:2.4.1.159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside L-rhamnosyltransferase activity","secondary_identifiers":["RHEA:22528"],"synonyms":[{"name":"UDP-L-rhamnose:flavonol-3-O-D-glucoside 6''-O-L-rhamnosyltransferase activity","type":"related"},{"name":"UDP-rhamnose:flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"},{"name":"uridine diphosphorhamnose-flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"}],"termid":"GO:0047230"}


id: PBO:0078388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-3","termid":"PBO:0078388"}


id: SO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Elements of the Tc1-Mariner terminal inverted repeat transposon superfamily (also called mariner transposons) are named after the Transponon of C. elegans number 1 transposasse. Their activity creates a 2-bp (TA) target-site duplication (TSD). Stowaway is the non-autonomous element in this superfamily usually shorter than 600 bp.","definition_xrefs":["PMID:17984973","PMID:8556864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tc1_Mariner_TIR_transposon","synonyms":[{"name":"DTT transposon","type":"exact"},{"name":"Mariner","type":"exact"},{"name":"Stowaway","type":"exact"},{"name":"Tc1 Mariner TIR transposon","type":"exact"},{"name":"Tc1 transposon","type":"exact"},{"name":"TcMar-Stowaway transposon","type":"exact"}],"termid":"SO:0002278"}


id: PBO:0068939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 182, pseudogene","termid":"PBO:0068939"}


id: PBO:0081013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 1","termid":"PBO:0081013"}


id: PBO:0110238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex armadillo-type fold Ipi1","termid":"PBO:0110238"}


id: PBO:0067166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 219, pseudogene","termid":"PBO:0067166"}


id: PBO:0028376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxanine_DNA_N-glycosylase_activity","termid":"PBO:0028376"}


id: PBO:0047142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 177 member A1 pseudogene 1","termid":"PBO:0047142"}


id: GO:0038018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a Wnt receptor. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:rl","GOC:signaling","PMID:19643732","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor catabolic process","termid":"GO:0032801"},{"relation_name":"part_of","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"Wnt receptor catabolic process","synonyms":[{"name":"Frizzled degradation","type":"narrow"},{"name":"Wnt receptor breakdown","type":"exact"},{"name":"Wnt receptor catabolism","type":"exact"},{"name":"Wnt receptor degradation","type":"related"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor degradation","type":"exact"}],"termid":"GO:0038018"}


id: GO:0047001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 2-dehydro-3-deoxy-D-gluconate = NADH + (4S)-4,6-dihydroxy-2,5-dioxohexanoate.","definition_xrefs":["EC:1.1.1.127","MetaCyc:1.1.1.127-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity","secondary_identifiers":["RHEA:24232"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconate:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"2-keto-3-deoxy-D-gluconate (3-deoxy-D-glycero-2,5-hexodiulosonic acid) dehydrogenase activity","type":"related"},{"name":"2-keto-3-deoxygluconate (nicotinamide adenine dinucleotide (phosphate)) dehydrogenase activity","type":"related"},{"name":"2-keto-3-deoxygluconate 5-dehydrogenase activity","type":"related"},{"name":"2-keto-3-deoxygluconate dehydrogenase activity","type":"related"}],"termid":"GO:0047001"}


id: PBO:0068389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF207 antisense RNA 1","termid":"PBO:0068389"}


id: PBO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9 pseudogene 1","termid":"PBO:0061120"}


id: GO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, fungal cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antifungal peptide activity (obsolete GO:0003799)","synonyms":[{"name":"antifungal peptide activity","type":"exact"}],"termid":"GO:0003799"}


id: GO:1990044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location on or within a lipid droplet.","definition_xrefs":["PMID:22505614","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lipid droplet","synonyms":[{"name":"protein localisation to adiposome","type":"exact"},{"name":"protein localisation to lipid body","type":"exact"},{"name":"protein localisation to lipid droplet","type":"exact"},{"name":"protein localisation to lipid particle","type":"exact"},{"name":"protein localization to adiposome","type":"exact"},{"name":"protein localization to lipid body","type":"exact"},{"name":"protein localization to lipid particle","type":"exact"}],"termid":"GO:1990044"}


id: FYPO:0001930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to gamma radiation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to gamma radiation","synonyms":[{"name":"abnormal cellular response to gamma radiation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"abnormal sensitivity to gamma radiation","type":"exact"}],"termid":"FYPO:0001930"}


id: GO:0071442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K14 acetylation (obsolete GO:0071442)","synonyms":[{"name":"activation of histone H3-K14 acetylation","type":"narrow"},{"name":"positive regulation of histone H3 acetylation at K14","type":"exact"},{"name":"positive regulation of histone H3K14 acetylation","type":"exact"},{"name":"stimulation of histone H3-K14 acetylation","type":"narrow"},{"name":"up regulation of histone H3-K14 acetylation","type":"exact"},{"name":"up-regulation of histone H3-K14 acetylation","type":"exact"},{"name":"upregulation of histone H3-K14 acetylation","type":"exact"}],"termid":"GO:0071442"}


id: GO:0047538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-carboxy-D-arabinitol 1-phosphate + H2O = 2-carboxy-D-arabinitol + phosphate.","definition_xrefs":["EC:3.1.3.63","RHEA:17837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-carboxy-D-arabinitol-1-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R04167","MetaCyc:2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN"],"synonyms":[{"name":"2-carboxy-D-arabinitol 1-phosphate phosphohydrolase activity","type":"related"},{"name":"2-carboxy-D-arabinitol-1-phosphate 1-phosphohydrolase activity","type":"related"},{"name":"2-carboxyarabinitol 1-phosphatase activity","type":"related"}],"termid":"GO:0047538"}


