# terms

id: PBO:0065809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3C, member RAS oncogene family","termid":"PBO:0065809"}


id: PBO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 23","termid":"PBO:0071605"}


id: PR:Q9P7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ker1 gene.","definition_xrefs":["UniProtKB:Q9P7P1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.03","synonyms":[{"name":"DNA-directed RNA polymerase I 17 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ker1","type":"exact"},{"name":"nucleolar protein ker1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P1"}


id: PBO:0027814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_chromosomes_during_meiosis_I","termid":"PBO:0027814"}


id: GO:0019394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucarate, the anion of glucaric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucarate metabolic process","termid":"GO:0019392"},{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"glucarate catabolic process","secondary_identifiers":["MetaCyc:GLUCARDEG-PWY"],"synonyms":[{"name":"glucarate catabolism","type":"exact"},{"name":"glucarate degradation","type":"exact"},{"name":"glucarate breakdown","type":"exact"}],"termid":"GO:0019394"}


id: PBO:0060417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 80, NatH catalytic subunit","termid":"PBO:0060417"}


id: PBO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 92 pseudogene","termid":"PBO:0070177"}


id: GO:0033202
data:
  {"annotated_genes":["SJAG_03219","SJAG_03495","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033203"},{"annotations":[105266,106506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017117"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses DNA helicase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02822":null,"SJAG_03219":null,"SJAG_03495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA helicase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033202","terms_by_termid":{"GO:0017117":null,"GO:0033203":null}}


id: GO:0106128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["PMID:23447642","GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"negatively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of store-operated calcium entry","termid":"GO:0106128"}


id: FYPO:0007589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in endosomes is observed there.","definition_xrefs":["PMID:19624755","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to endosome","synonyms":[{"name":"ectopic protein localization to endosome","type":"exact"},{"name":"protein mislocalised to endosome","type":"exact"},{"name":"protein mislocalized to endosome during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to endosome during vegetative growth","type":"exact"}],"termid":"FYPO:0007589"}


id: PBO:0087100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit; required for translational accuracy; homologous to mammalian ribosomal protein S23 and bacterial S12; RPS23A has a paralog, RPS23B, that arose from the whole genome duplication; deletion of both RPS23A and RPS23B is lethal","termid":"PBO:0087100"}


id: FYPO:0006298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of the 5.8S ribosomal RNA molecule is abnormal.","definition_xrefs":["GO:0000467","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"},{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal 5.8S rRNA 3'-end processing","synonyms":[{"name":"abnormal 5.8S rRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal 5.8S rRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"abnormal exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"FYPO:0006298"}


id: GO:0019659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, and possibly ethanol, yielding energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process","termid":"GO:0006007"},{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glucose catabolic process to lactate","secondary_identifiers":["Wikipedia:Lactic_acid_fermentation"],"synonyms":[{"name":"glucose fermentation to lactate","type":"exact"},{"name":"lactate fermentation","type":"exact"}],"termid":"GO:0019659"}


id: PR:Q9UUN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prenylated Rab acceptor protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19317:SF0","OMA:SCHPO04300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.02c","secondary_identifiers":["UniProtKB:Q9UUN5"],"synonyms":[{"name":"Spom972h-RABAC1","type":"exact"}],"termid":"PR:Q9UUN5"}


id: GO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 4'-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"quercetin 4'-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-10788"],"termid":"GO:0080046"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: GO:0051399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an arginine residue from the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["PMID:12799365","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal arginine aminopeptidase activity (obsolete GO:0051399)","synonyms":[{"name":"N-terminal arginine aminopeptidase activity","type":"exact"},{"name":"arginine aminopeptidase activity","type":"broad"},{"name":"argininyl aminopeptidase activity","type":"broad"}],"termid":"GO:0051399"}


id: PBO:0061054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 2","termid":"PBO:0061054"}


id: PBO:0030568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_glycine_level","termid":"PBO:0030568"}


id: PR:O14026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-36 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.02c","synonyms":[{"name":"SET domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set2","type":"exact"},{"name":"lysine N-methyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14026"}


id: GO:0010085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the proximal/distal axis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"proximal/distal axis specification","termid":"GO:0009946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of proximal/distal axis","termid":"GO:0010085"}


id: PBO:0075784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 8","termid":"PBO:0075784"}


id: FYPO:0003835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["GO:0030989","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"},{"relation_name":"is_a","term_name":"normal nucleus positioning","termid":"FYPO:0001389"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal horsetail movement","synonyms":[{"name":"normal dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0003835"}


id: PBO:0087242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protease of SPS plasma membrane amino acid sensor system; contains an inhibitory domain that dissociates in response to extracellular amino acids, freeing a catalytic domain to activate transcription factor Stp1p; other members are Ssy1p and Ptr3p","termid":"PBO:0087242"}


id: PBO:0071825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 20","termid":"PBO:0071825"}


id: GO:0008465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD+ = hydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerate dehydrogenase activity","secondary_identifiers":["MetaCyc:GLYCERATE-DEHYDROGENASE-RXN","RHEA:17905"],"synonyms":[{"name":"hydroxypyruvate dehydrogenase activity","type":"broad"}],"termid":"GO:0008465"}


id: FYPO:0004567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype which the spindle is broken into fragments during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0000120","FYPO:0005447"],"is_obsolete":false,"name":"fragmented spindle during meiosis II","synonyms":[{"name":"fragmented meiotic spindle during meiosis II","type":"exact"},{"name":"fragmented spindle during second meiotic nuclear division","type":"exact"},{"name":"fragmented spindle pole body during mitotic cell cycle","type":"related"},{"name":"spindle fragmentation during meiosis II","type":"exact"}],"termid":"FYPO:0004567"}


id: PBO:0078986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon CTA) 2-1","termid":"PBO:0078986"}


id: PBO:0087491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex; involved in both chromosomal DNA replication and inheritance of telomeric silencing; stabilizes the interaction of Pol epsilon with primer-template DNA, positively affecting the processivity of the polymerase and exonuclease activities of Pol epsilon; interacts with extranucleosomal DNA and acts as anchor point for ISW2 complex that retains its position on DNA during nucleosome mobilization","termid":"PBO:0087491"}


id: PBO:0041071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICHOS domain containing 5","termid":"PBO:0041071"}


id: PBO:0073108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 9C member 7","termid":"PBO:0073108"}


id: PBO:0062893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L divergent transcript","termid":"PBO:0062893"}


id: GO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosphingolipid and lysophosphatidic acid receptor activity (obsolete GO:0001619)","synonyms":[{"name":"lysosphingolipid and lysophosphatidic acid receptor activity","type":"exact"}],"termid":"GO:0001619"}


id: PBO:0070384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal outer segment membrane protein 1","termid":"PBO:0070384"}


id: SO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the gene which is not transcribed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_transcribed_region","synonyms":[{"name":"non transcribed region","type":"exact"},{"name":"non-transcribed sequence","type":"exact"},{"name":"nontranscribed region","type":"exact"},{"name":"nontranscribed sequence","type":"exact"}],"termid":"SO:0000183"}


id: GO:0097573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein-S-S-glutathione + glutathione-SH = protein-SH + glutathione-S-S-glutathione.","definition_xrefs":["PMID:18992757","GOC:jd"],"gene_count":0,"genotype_count":0,"name":"obsolete glutathione oxidoreductase activity (obsolete GO:0097573)","termid":"GO:0097573"}


id: GO:0014865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an activity stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to activity","termid":"GO:0014823"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of activity","termid":"GO:0014865"}


id: FYPO:0000576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of gene silencing is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene silencing","termid":"FYPO:0000574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased gene silencing","synonyms":[{"name":"decreased gene silencing during mitotic cell cycle","type":"related"},{"name":"decreased gene silencing during vegetative growth","type":"exact"},{"name":"reduced gene silencing","type":"exact"},{"name":"silencing: decreased","type":"related"}],"termid":"FYPO:0000576"}


id: PBO:0091815
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF Eight-Six-Six","termid":"PBO:0091815"}


id: MOD:00589
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to (13)C,(15)N labeled L-phenylalanine.","definition_xrefs":["PubMed:12771378","Unimod:269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,1x(15)N labeled L-phenylalanine","synonyms":[{"name":"13C(9) 15N(1) Silac label","type":"related"},{"name":"Label:13C(9)15N(1)","type":"related"}],"termid":"MOD:00589"}


id: PBO:0054175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1548","termid":"PBO:0054175"}


id: PBO:0050047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, J (pseudogene)","termid":"PBO:0050047"}


id: GO:0140704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3',2' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 3',5' and 2',5' linkages.","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP binding","synonyms":[{"name":"3',2' cyclic-GMP-AMP binding","type":"exact"},{"name":"3',2'-cGAMP binding","type":"exact"},{"name":"3',2'-cyclic GAMP binding","type":"exact"}],"termid":"GO:0140704"}


id: GO:1905703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory synapse assembly.","definition_xrefs":["PMID:27779093","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"regulation of inhibitory synapse assembly","termid":"GO:1905702"},{"relation_name":"negatively_regulates","term_name":"inhibitory synapse assembly","termid":"GO:1904862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of inhibitory synapse assembly","synonyms":[{"name":"down regulation of inhibitory synapse assembly","type":"exact"},{"name":"down regulation of inhibitory synapse formation","type":"exact"},{"name":"down-regulation of inhibitory synapse assembly","type":"exact"},{"name":"down-regulation of inhibitory synapse formation","type":"exact"},{"name":"downregulation of inhibitory synapse assembly","type":"exact"},{"name":"downregulation of inhibitory synapse formation","type":"exact"},{"name":"inhibition of inhibitory synapse assembly","type":"narrow"},{"name":"inhibition of inhibitory synapse formation","type":"narrow"},{"name":"negative regulation of inhibitory synapse formation","type":"exact"}],"termid":"GO:1905703"}


id: PBO:0066572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group CcEe antigens","termid":"PBO:0066572"}


id: PBO:0042196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D1 binding protein 1","termid":"PBO:0042196"}


id: FYPO:0000698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased DNA-7-methylguanine glycosylase activity","synonyms":[{"name":"reduced DNA-7-methylguanine glycosylase activity","type":"exact"}],"termid":"FYPO:0000698"}


id: PBO:0077141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 1 pseudogene 1","termid":"PBO:0077141"}


id: GO:0031672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line.","definition_xrefs":["ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"A band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"A disc","type":"exact"},{"name":"Q disc","type":"exact"},{"name":"anisotropic disc","type":"exact"},{"name":"transverse disc","type":"exact"}],"termid":"GO:0031672"}


id: PBO:0057206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376a-1","termid":"PBO:0057206"}


id: GO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of erythrocyte enucleation","termid":"GO:0061930"},{"relation_name":"positively_regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte enucleation","termid":"GO:0061931"}


id: SO:0000597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The insertion and deletion of uridine (U) residues, usually within coding regions of mRNA transcripts of cryptogenes in the mitochondrial genome of kinetoplastid protozoa.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000597 transcript_edited_by_U_insertion/deletion (obsolete SO:0000597)","termid":"SO:0000597"}


id: PBO:0043836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1A","termid":"PBO:0043836"}


id: PBO:0085210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding  phosphatidylserine transferase; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; GFP-fusion protein localizes to the cell periphery; overexpression extends lifespan by promoting vacuolar fusion; OSH6 has a paralog, OSH7, that arose from the whole genome duplication","termid":"PBO:0085210"}


id: SO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substitution_artifact","synonyms":[{"name":"substitution artifact","type":"exact"}],"termid":"SO:0002176"}


id: PBO:0084834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that interacts with mitochondrial RNA polymerase; interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription","termid":"PBO:0084834"}


id: FYPO:0007229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 3'-deoxyribose phosphate lyase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 3'-deoxyribose phosphate lyase activity","termid":"FYPO:0007228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished 3'-deoxyribose phosphate lyase activity","synonyms":[{"name":"3'-deoxyribose phosphate lyase activity abolished","type":"exact"},{"name":"abolished 3'-dRP lyase activity","type":"exact"}],"termid":"FYPO:0007229"}


id: GO:1903313
data:
  {"annotated_genes":["SJAG_01818","SJAG_01919","SJAG_00285","SJAG_02808","SJAG_01040","SJAG_04825","SJAG_04153","SJAG_02213","SJAG_03883","SJAG_00854","SJAG_04321","SJAG_04818","SJAG_04880","SJAG_05010","SJAG_00686","SJAG_00391","SJAG_00966","SJAG_04427","SJAG_01910","SJAG_04350","SJAG_02540","SJAG_02058","SJAG_03876","SJAG_02036","SJAG_03745","SJAG_01191","SJAG_03597","SJAG_00996","SJAG_04824","SJAG_02018","SJAG_04084","SJAG_04682","SJAG_02622","SJAG_16457","SJAG_05694","SJAG_04006","SJAG_00759","SJAG_03179","SJAG_01625","SJAG_04407","SJAG_00343","SJAG_02723","SJAG_01436","SJAG_01944","SJAG_03157","SJAG_02383","SJAG_01521","SJAG_00504","SJAG_03113","SJAG_02239","SJAG_01053","SJAG_05322","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[108182,87731,106072,109660,106121,102304],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[114229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[89250,98249,102633,88429,114417,93428,92096,101425,100567,111600,103632,112047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[92099,96083,85905,94319,109507,114420,107253,89253,100570,111307,101428,94235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[88777,88683,86982,94688,89589,111812,88116,91691,112768,113307,105387,99206,88175,85995,90513],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87848],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[114536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74384,107107,88342,73001,92510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[102828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[97170,101079,85906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"positively_regulates","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00504":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01436":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01919":null,"SJAG_01944":null,"SJAG_02018":null,"SJAG_02036":null,"SJAG_02058":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA metabolic process","type":"narrow"},{"name":"activation of mRNA metabolism","type":"narrow"},{"name":"positive regulation of mRNA metabolism","type":"exact"},{"name":"up regulation of mRNA metabolic process","type":"exact"},{"name":"up regulation of mRNA metabolism","type":"exact"},{"name":"up-regulation of mRNA metabolic process","type":"exact"},{"name":"up-regulation of mRNA metabolism","type":"exact"},{"name":"upregulation of mRNA metabolic process","type":"exact"},{"name":"upregulation of mRNA metabolism","type":"exact"}],"termid":"GO:1903313","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0048026":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:1905746":null,"GO:1990074":null}}


id: PBO:0064877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 36","termid":"PBO:0064877"}


id: PBO:0026978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatidylinositol-3-phosphate_binding","termid":"PBO:0026978"}


id: PBO:0038765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 2","termid":"PBO:0038765"}


id: PBO:0072396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 1","termid":"PBO:0072396"}


id: GO:0017006
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103655,90617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018063"}]},"cv_name":"biological_process","definition":"The covalent linking of a tetrapyrrole to a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-tetrapyrrole linkage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017006","terms_by_termid":{"GO:0018063":null}}


id: GO:0060288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lineage restriction boundary within a developing tissue which does not correspond to some morphological barrier.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of a compartment boundary","synonyms":[{"name":"compartment boundary formation","type":"exact"}],"termid":"GO:0060288"}


id: GO:0071675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mononuclear cell migration","termid":"GO:0071675"}


id: PBO:0057130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 214","termid":"PBO:0057130"}


id: PBO:0054099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1455","termid":"PBO:0054099"}


id: GO:0018700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-N-isopropylacetanilide + H+ + 2 e- = Cl- + N-isopropylacetanilide.","definition_xrefs":["UM-BBD_reactionID:r0719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-chloro-N-isopropylacetanilide reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0018700"}


id: PBO:0045967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophil granule ontogeny transcript","termid":"PBO:0045967"}


id: GO:0015032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of hemolymph proteins by cells of the fat body of holometabolous insects, during the final larval stage. Uptake of these proteins prepares the insect for pupation and metamorphosis, since insect pupae do not feed and therefore depend on material that has been accumulated during larval life.","definition_xrefs":["PMID:10231363","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein import into fat body (obsolete GO:0015032)","synonyms":[{"name":"fat body metabolic process","type":"broad"},{"name":"fat body metabolism","type":"broad"},{"name":"fat body storage protein uptake","type":"exact"},{"name":"import of storage protein into fat body","type":"exact"},{"name":"storage protein import by fat body cells","type":"exact"},{"name":"storage protein import into fat body cells","type":"exact"},{"name":"storage protein transport into fat body cells","type":"exact"},{"name":"storage protein uptake into fat body cells","type":"exact"}],"termid":"GO:0015032"}


id: PBO:0087385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; regulates transcription of sterol biosynthetic genes upon sterol depletion, after relocating from intracellular membranes to perinuclear foci; redundant activator of filamentation with UPC2, up-regulating the expression of genes involved in filamentous growth; contains Zn[2]-Cys[6] binuclear cluster; ECM22 has a paralog, UPC2, that arose from the whole genome duplication","termid":"PBO:0087385"}


id: GO:0042549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem II protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosystem II stabilization","termid":"GO:0042549"}


id: SO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A signal sequence that is not cleaved from the polypeptide. Anchors a Type II membrane protein to the membrane.","direct_ancestors":[{"relation_name":"is_a","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"signal_anchor","synonyms":[{"name":"signal anchor","type":"exact"},{"name":"uncleaved signal peptide","type":"exact"}],"termid":"SO:0001809"}


id: PBO:0052280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 6B","termid":"PBO:0052280"}


id: PBO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor 13","termid":"PBO:0050069"}


id: PBO:0089551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27","termid":"PBO:0089551"}


id: GO:0008984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamate O(5)-methyl ester + H2O = protein L-glutamate + methanol.","definition_xrefs":["EC:3.1.1.61","RESID:AA0072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-glutamate methylesterase activity","secondary_identifiers":["MetaCyc:MCPMETEST-RXN","RHEA:23236"],"synonyms":[{"name":"CheB methylesterase activity","type":"narrow"},{"name":"chemotaxis-specific methylesterase activity","type":"narrow"},{"name":"methyl-accepting chemotaxis protein methyl-esterase activity","type":"narrow"},{"name":"methylesterase CheB activity","type":"narrow"},{"name":"protein-L-glutamate-5-O-methyl-ester acylhydrolase activity","type":"related"},{"name":"protein-L-glutamate-O5-methyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0008984"}


id: PBO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030965"}


id: GO:0033487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pelargonidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["MetaCyc:PWY-5125","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"pelargonidin 3-O-glucoside anabolism","type":"exact"},{"name":"pelargonidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"pelargonidin 3-O-glucoside formation","type":"exact"},{"name":"pelargonidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033487"}


id: PBO:0024472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Crs102 (predicted)","termid":"PBO:0024472"}


id: PBO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp14","termid":"PBO:0004135"}


id: PBO:0017414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-preceded_by","termid":"PBO:0017414"}


id: GO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the breakdown of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of substance in symbiont (obsolete GO:0052364)","termid":"GO:0052364"}


id: SO:1000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution of a pyrimidine, C or T, for another pyrimidine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition","termid":"SO:1000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_transition","synonyms":[{"name":"pyrimidine transition","type":"exact"}],"termid":"SO:1000010"}


id: PBO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 17","termid":"PBO:0050315"}


id: MOD:00616
data:
  {"annotated_genes":["SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115443,115442,115413,115440,115414,115441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.1 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"termid":"MOD:00616","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: MOD:00874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a triglutamic acid.","definition_xrefs":["PubMed:10747868","Unimod:452","RESID:AA0202#var","DeltaMass:0","PubMed:1680872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl triglutamic acid","synonyms":[{"name":"GluGluGlu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu3","type":"exact"},{"name":"triglutamyl","type":"related"}],"termid":"MOD:00874"}


id: PBO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs2","termid":"PBO:0001858"}


id: PBO:0069298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 554, pseudogene","termid":"PBO:0069298"}


id: PATO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electrical conductivity","termid":"PATO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve conductivity","termid":"PATO:0001758"}


id: GO:1900395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of kojic acid biosynthetic process","termid":"GO:1900394"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of kojic acid biosynthetic process","synonyms":[{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"down regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"down regulation of C6H6O4 anabolism","type":"related"},{"name":"down regulation of C6H6O4 biosynthesis","type":"related"},{"name":"down regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"down regulation of C6H6O4 formation","type":"related"},{"name":"down regulation of C6H6O4 synthesis","type":"related"},{"name":"down regulation of kojic acid anabolism","type":"exact"},{"name":"down regulation of kojic acid biosynthesis","type":"exact"},{"name":"down regulation of kojic acid biosynthetic process","type":"exact"},{"name":"down regulation of kojic acid formation","type":"exact"},{"name":"down regulation of kojic acid synthesis","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"down-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"down-regulation of C6H6O4 anabolism","type":"related"},{"name":"down-regulation of C6H6O4 biosynthesis","type":"related"},{"name":"down-regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"down-regulation of C6H6O4 formation","type":"related"},{"name":"down-regulation of C6H6O4 synthesis","type":"related"},{"name":"down-regulation of kojic acid anabolism","type":"exact"},{"name":"down-regulation of kojic acid biosynthesis","type":"exact"},{"name":"down-regulation of kojic acid biosynthetic process","type":"exact"},{"name":"down-regulation of kojic acid formation","type":"exact"},{"name":"down-regulation of kojic acid synthesis","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"downregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"downregulation of C6H6O4 anabolism","type":"related"},{"name":"downregulation of C6H6O4 biosynthesis","type":"related"},{"name":"downregulation of C6H6O4 biosynthetic process","type":"related"},{"name":"downregulation of C6H6O4 formation","type":"related"},{"name":"downregulation of C6H6O4 synthesis","type":"related"},{"name":"downregulation of kojic acid anabolism","type":"exact"},{"name":"downregulation of kojic acid biosynthesis","type":"exact"},{"name":"downregulation of kojic acid biosynthetic process","type":"exact"},{"name":"downregulation of kojic acid formation","type":"exact"},{"name":"downregulation of kojic acid synthesis","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"inhibition of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"inhibition of C6H6O4 anabolism","type":"related"},{"name":"inhibition of C6H6O4 biosynthesis","type":"related"},{"name":"inhibition of C6H6O4 biosynthetic process","type":"related"},{"name":"inhibition of C6H6O4 formation","type":"related"},{"name":"inhibition of C6H6O4 synthesis","type":"related"},{"name":"inhibition of kojic acid anabolism","type":"exact"},{"name":"inhibition of kojic acid biosynthesis","type":"exact"},{"name":"inhibition of kojic acid biosynthetic process","type":"narrow"},{"name":"inhibition of kojic acid formation","type":"exact"},{"name":"inhibition of kojic acid synthesis","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"negative regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"negative regulation of C6H6O4 anabolism","type":"related"},{"name":"negative regulation of C6H6O4 biosynthesis","type":"related"},{"name":"negative regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"negative regulation of C6H6O4 formation","type":"related"},{"name":"negative regulation of C6H6O4 synthesis","type":"related"},{"name":"negative regulation of kojic acid anabolism","type":"exact"},{"name":"negative regulation of kojic acid biosynthesis","type":"exact"},{"name":"negative regulation of kojic acid formation","type":"exact"},{"name":"negative regulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900395"}


id: GO:0052229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism of macromolecule in other organism involved in symbiotic interaction (obsolete GO:0052229)","synonyms":[{"name":"metabolism of macromolecule in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052229"}


id: GO:0033581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation in Golgi (obsolete GO:0033581)","synonyms":[{"name":"protein amino acid galactosylation in Golgi","type":"exact"}],"termid":"GO:0033581"}


id: GO:0008540
data:
  {"annotated_genes":["SJAG_02992","SJAG_03638","SJAG_04477","SJAG_01489","SJAG_00712","SJAG_00766","SJAG_04088","SJAG_01131","SJAG_01544"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92927,95114,100245,101503,103248,106428,109224,111348,113560],"is_not":false,"summary":null,"term":"GO:0008540"}]},"cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.","definition_xrefs":["GOC:rb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome regulatory particle","termid":"GO:0005838"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02992":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome regulatory particle, base subcomplex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008540","terms_by_termid":{"GO:0008540":null}}


id: PBO:0062322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 4","termid":"PBO:0062322"}


id: FYPO:0002202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable stubby vegetative cell population (obsolete FYPO:0002202)","synonyms":[{"name":"stubby inviable vegetative cell population","type":"exact"}],"termid":"FYPO:0002202"}


id: PBO:0071681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 13","termid":"PBO:0071681"}


id: PR:P78926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map1 gene.","definition_xrefs":["UniProtKB:P78926","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone receptor transcription activator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.06","synonyms":[{"name":"Spom972h-map1","type":"exact"},{"name":"protein map1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78926"}


id: GO:0016780
data:
  {"annotated_genes":["SJAG_01233","SJAG_04317","SJAG_04319","SJAG_03180","SJAG_03506","SJAG_00924","SJAG_02488","SJAG_02523","SJAG_00168","SJAG_04972","SJAG_00999","SJAG_01955","SJAG_04165"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043337"},{"annotations":[89218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008808"},{"annotations":[109205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008444"},{"annotations":[88330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003881"},{"annotations":[110844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003882"},{"annotations":[84880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051267"},{"annotations":[89234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004142"},{"annotations":[89235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004307"},{"annotations":[86560,93498,93869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008897"},{"annotations":[110953,108540,103729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051377"},{"annotations":[99748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003975"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00924":null,"SJAG_00999":null,"SJAG_01233":null,"SJAG_01955":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_03180":null,"SJAG_03506":null,"SJAG_04165":null,"SJAG_04317":null,"SJAG_04319":null,"SJAG_04972":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, for other substituted phosphate groups","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.8.-","Reactome:R-HSA-162742","Reactome:R-HSA-163069"],"termid":"GO:0016780","terms_by_termid":{"GO:0003881":null,"GO:0003882":null,"GO:0003975":null,"GO:0004142":null,"GO:0004307":null,"GO:0008444":null,"GO:0008808":null,"GO:0008897":null,"GO:0043337":null,"GO:0051267":null,"GO:0051377":null}}


id: PBO:0055209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2634","termid":"PBO:0055209"}


id: GO:0051897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase/protein kinase B signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0051896"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0043491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","synonyms":[{"name":"activation of protein kinase B signaling cascade","type":"narrow"},{"name":"positive regulation of AKT signaling cascade","type":"related"},{"name":"positive regulation of AKT signalling cascade","type":"related"},{"name":"positive regulation of PI3K-PKB/Akt pathway","type":"exact"},{"name":"positive regulation of PI3K/Akt signal transduction","type":"exact"},{"name":"positive regulation of PI3K/PKB signal transduction","type":"exact"},{"name":"positive regulation of PKB signaling cascade","type":"related"},{"name":"positive regulation of PKB signalling cascade","type":"related"},{"name":"positive regulation of phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"positive regulation of protein kinase B signaling","type":"related"},{"name":"positive regulation of protein kinase B signaling cascade","type":"related"},{"name":"positive regulation of protein kinase B signalling cascade","type":"related"},{"name":"stimulation of protein kinase B signaling cascade","type":"narrow"},{"name":"up regulation of protein kinase B signaling cascade","type":"related"},{"name":"up-regulation of protein kinase B signaling cascade","type":"related"},{"name":"upregulation of protein kinase B signaling cascade","type":"related"}],"termid":"GO:0051897"}


id: PBO:0057881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3185","termid":"PBO:0057881"}


id: PBO:0070217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 149 pseudogene","termid":"PBO:0070217"}


id: GO:1901764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphinothricin.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphinothricin metabolic process","synonyms":[{"name":"phosphinothricin metabolism","type":"exact"}],"termid":"GO:1901764"}


id: FYPO:0004341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed mitochondrial fission during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of mitochondrial division","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to H2O2","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial proliferation","type":"related"}],"termid":"FYPO:0004341"}


id: PBO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.21.-","termid":"PBO:0000540"}


id: GO:0062098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["GOC:rph","PMID:27258785","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed necrotic cell death","termid":"GO:0062098"}


id: GO:0060385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurite development process that generates a long process of a neuron, as it invades a target tissue.","definition_xrefs":["GOC:dph","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"innervation","termid":"GO:0060384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis involved in innervation","termid":"GO:0060385"}


id: GO:1903784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GOC:nc","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:19376779","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"positively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of sodium ion import across plasma membrane","synonyms":[{"name":"activation of sodium ion import across plasma membrane","type":"narrow"},{"name":"up regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"up-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"upregulation of sodium ion import across plasma membrane","type":"exact"}],"termid":"GO:1903784"}


id: PBO:0055320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2748","termid":"PBO:0055320"}


id: PBO:0070025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1322, pseudogene","termid":"PBO:0070025"}


id: PBO:0054880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2294","termid":"PBO:0054880"}


id: PBO:0085008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the H(+)-ATPase Pma1p; stress-responsive protein; hydrophobic plasma membrane localized; induced by heat shock, ethanol treatment, weak organic acid, glucose limitation, and entry into stationary phase","termid":"PBO:0085008"}


id: GO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the cell soma (neuronal cell body) that excludes the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perikaryon","synonyms":[{"name":"cell soma cytoplasm","type":"related"}],"termid":"GO:0043204"}


id: GO:0051139
data:
  {"annotated_genes":["SJAG_04698","SJAG_01541","SJAG_04096","SJAG_04028","SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111718,87389,94505,86905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[87390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[85530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[92920,85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: metal ion(in) + H+(out) = metal ion(out) + H+(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04616":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"metal cation:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-435171"],"synonyms":[{"name":"metal ion:hydrogen antiporter activity","type":"exact"},{"name":"metal ion:proton antiporter activity","type":"exact"}],"termid":"GO:0051139","terms_by_termid":{"GO:0010486":null,"GO:0015369":null,"GO:0015385":null,"GO:0015386":null}}


id: PBO:0085167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated covalently-bound cell wall protein; required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway; coding sequence contains length polymorphisms in different strains; PIR3 has a paralog, HSP150, that arose from the whole genome duplication","termid":"PBO:0085167"}


id: PR:Q7LKZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lvs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LKZ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.06c","synonyms":[{"name":"Spom972h-lvs1","type":"exact"}],"termid":"PR:Q7LKZ7"}


id: GO:0046637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell differentiation","synonyms":[{"name":"regulation of alpha-beta T cell development","type":"related"},{"name":"regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046637"}


id: GO:0102759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + campestanol + O2 + NADPH = 6-deoxycathasterone + H2O + NADP.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"campestanol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-773"],"termid":"GO:0102759"}


id: FYPO:0003655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the splicing tRNA substrates does not occur.","definition_xrefs":["PomBase:mah","GO:0006388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abolished tRNA splicing","synonyms":[{"name":"abolished tRNA splicing during mitotic cell cycle","type":"related"},{"name":"abolished tRNA splicing during vegetative growth","type":"exact"},{"name":"abolished tRNA splicing, via endonucleolytic cleavage and ligation","type":"exact"},{"name":"tRNA splicing abolished","type":"exact"}],"termid":"FYPO:0003655"}


id: GO:0003725
data:
  {"annotated_genes":["SJAG_02156","SJAG_04527","SJAG_01643","SJAG_04700","SJAG_03689","SJAG_04410","SJAG_04019","SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60774,98344,103486,104674,106031,111842,112155,114743],"is_not":false,"summary":null,"term":"GO:0003725"}]},"cv_name":"molecular_function","definition":"Binding to double-stranded RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01643":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04369":null,"SJAG_04410":null,"SJAG_04527":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"double-stranded RNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"dsRNA binding","type":"exact"}],"termid":"GO:0003725","terms_by_termid":{"GO:0003725":null}}


id: FYPO:0000016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"curved vegetative cell","synonyms":[{"name":"cell morphology, curved","type":"exact"},{"name":"comma-shaped cell","type":"exact"},{"name":"curved cell","type":"exact"},{"name":"curved cell during vegetative growth","type":"exact"},{"name":"curved vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000016"}


id: PBO:0049773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9","termid":"PBO:0049773"}


id: PBO:0036293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective in Mitotic Arrest","termid":"PBO:0036293"}


id: PBO:0030408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-polysaccharide_absent_from_cell","termid":"PBO:0030408"}


id: PBO:0043779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A5","termid":"PBO:0043779"}


id: PBO:0003642
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds FLEX 5'-GTAAAYA-3'","termid":"PBO:0003642"}


id: GO:0030015
data:
  {"annotated_genes":["SJAG_04350","SJAG_01053","SJAG_00343","SJAG_00285","SJAG_03883","SJAG_01944","SJAG_04407","SJAG_02540","SJAG_03597"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85992,88172,88680,88773,90510,91686,111808,112764,113303],"is_not":false,"summary":null,"term":"GO:0030015"}]},"cv_name":"cellular_component","definition":"The core of the CCR4-NOT complex. In Saccharomyces the CCR4-NOT core complex comprises Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p.","definition_xrefs":["PMID:11113136","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"CCR4-NOT complex","termid":"GO:0030014"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_01053":null,"SJAG_01944":null,"SJAG_02540":null,"SJAG_03597":null,"SJAG_03883":null,"SJAG_04350":null,"SJAG_04407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CCR4-NOT core complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030015","terms_by_termid":{"GO:0030015":null}}


id: PBO:0065909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB GTPase activating protein 1","termid":"PBO:0065909"}


id: PBO:0052385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF25 antisense RNA 1","termid":"PBO:0052385"}


id: PBO:0062428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 89 pseudogene","termid":"PBO:0062428"}


id: PBO:0070211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 140 pseudogene","termid":"PBO:0070211"}


id: PR:O13874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized NOC2 family protein C1B3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.09c","synonyms":[{"name":"Spom972h-SPAC1B3.09c","type":"exact"}],"termid":"PR:O13874"}


id: GO:1903398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of m7G(5')pppN diphosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:22323607","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of m7G(5')pppN diphosphatase activity (obsolete GO:1903398)","synonyms":[{"name":"regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"regulation of decapase activity","type":"related"},{"name":"regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:1903398"}


id: GO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes whereby a uridine residue in a tRNA is converted to 4-thiouridine. Typically 4-thiouridine is found at position 8, in many transfer RNAs.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA 4-thiouridine biosynthesis","termid":"GO:0002937"}


id: PBO:0066766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 64","termid":"PBO:0066766"}


id: GO:0098760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-7","synonyms":[{"name":"response to IL-7","type":"exact"}],"termid":"GO:0098760"}


id: PBO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein epsilon","termid":"PBO:0042683"}


id: PBO:0034456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_inositol_phosphate_phosphatase_activity","termid":"PBO:0034456"}


id: FYPO:0000970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mitomycin C. Cells stop growing (and may die) at a concentration of mitomycin C that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to mitomycin C","synonyms":[{"name":"hypersensitive to mitomycin C","type":"exact"},{"name":"sensitive to mitomycin C during mitotic cell cycle","type":"related"},{"name":"sensitive to mitomycin C during vegetative growth","type":"exact"}],"termid":"FYPO:0000970"}


id: _global:contains
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The inverse of contained_by.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains","termid":"_global:contains"}


id: PBO:0080639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87","termid":"PBO:0080639"}


id: PBO:0050146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 2","termid":"PBO:0050146"}


id: GO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an icosahedral viral capsid in the cytoplasm. Often occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic icosahedral capsid assembly","termid":"GO:0039710"}


id: PBO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr3","termid":"PBO:0033833"}


id: PBO:0088547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Efg1","termid":"PBO:0088547"}


id: FYPO:0004883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is abnormal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle midzone","synonyms":[{"name":"abnormal protein localisation to mitotic spindle midzone","type":"exact"},{"name":"abnormal protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0004883"}


id: PBO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi Interacting protein","termid":"PBO:0004221"}


id: FYPO:0007330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to formaldehyde. Cells stop growing (and may die) at a concentration of formaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to formaldehyde","synonyms":[{"name":"hypersensitive to formaldehyde","type":"exact"},{"name":"sensitive to formaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to formaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0007330"}


id: GO:0034970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 2 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R2 methylation (obsolete GO:0034970)","synonyms":[{"name":"histone H3 R2 methylation","type":"exact"},{"name":"histone H3R2me","type":"exact"},{"name":"histone lysine H3 R2 methylation","type":"exact"}],"termid":"GO:0034970"}


id: PBO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn5","termid":"PBO:0000663"}


id: PBO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_filament-based_movement","termid":"PBO:0035826"}


id: GO:1990705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cholangiocytes, resulting in the expansion of the cholangiocyte population. A cholangiocyte is an epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water.","definition_xrefs":["PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholangiocyte proliferation","synonyms":[{"name":"hepatoblast proliferation","type":"exact"}],"termid":"GO:1990705"}


id: PBO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap104","termid":"PBO:0090442"}


id: PBO:0075674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit B","termid":"PBO:0075674"}


id: GO:0075309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in the symbiont's size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth or development of symbiont on or near host surface (obsolete GO:0075309)","synonyms":[{"name":"negative regulation of growth or development of symbiont on or near host surface","type":"exact"}],"termid":"GO:0075309"}


id: PBO:0063607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4 variant 1","termid":"PBO:0063607"}


id: GO:0106020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle docking","synonyms":[{"name":"regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106020"}


id: PBO:0055997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated","termid":"PBO:0055997"}


id: GO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to environmental oxygen.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerotaxis","synonyms":[{"name":"taxis in response to atmospheric oxygen","type":"exact"}],"termid":"GO:0009454"}


id: GO:0033085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation in thymus","termid":"GO:0033081"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell differentiation in thymus","synonyms":[{"name":"negative regulation of T cell development in thymus","type":"related"},{"name":"negative regulation of thymic T cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033085"}


id: PATO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is low relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased age","synonyms":[{"name":"low age","type":"exact"}],"termid":"PATO:0001765"}


id: PBO:0080020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 6, pseudogene","termid":"PBO:0080020"}


id: PBO:0083843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exomer-dependent cargo protein; induces appearance of [PIN+] prion when overproduced; prion-like domain serves as a retention signal in the trans-Golgi network; predicted to be palmitoylated","termid":"PBO:0083843"}


id: PATO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapezoid","synonyms":[{"name":"trapezoidal","type":"exact"}],"termid":"PATO:0002044"}


id: PBO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 22","termid":"PBO:0071181"}


id: PBO:0081774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705B","termid":"PBO:0081774"}


id: PBO:0041791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 4","termid":"PBO:0041791"}


id: GO:0050582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xylitol + O2 = xylose + H2O2.","definition_xrefs":["MetaCyc:1.1.3.41-RXN","EC:1.1.3.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"xylitol oxidase activity","synonyms":[{"name":"xylitol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050582"}


id: PBO:0047539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 5","termid":"PBO:0047539"}


id: FYPO:0004908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which L-aminoadipate-semialdehyde dehydrogenase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"L-aminoadipate-semialdehyde dehydrogenase activity abolished","type":"exact"},{"name":"abolished alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0004908"}


id: GO:0050068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + carbamoyl phosphate = L-homocitrulline + H+ + phosphate.","definition_xrefs":["RHEA:17121","EC:2.1.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"lysine carbamoyltransferase activity","secondary_identifiers":["MetaCyc:LYSINE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R01396"],"synonyms":[{"name":"carbamoyl-phosphate:L-lysine carbamoyltransferase activity","type":"related"},{"name":"lysine transcarbamylase activity","type":"related"}],"termid":"GO:0050068"}


id: PBO:0053760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1002","termid":"PBO:0053760"}


id: GO:0042271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of causing a cell to become susceptible to natural killer cell mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"susceptibility to natural killer cell mediated cytotoxicity","synonyms":[{"name":"susceptibility to NK cell mediated cell death","type":"exact"},{"name":"susceptibility to NK cell mediated cell killing","type":"exact"},{"name":"susceptibility to NK cell mediated cytolysis","type":"exact"},{"name":"susceptibility to NK cell mediated cytotoxicity","type":"exact"},{"name":"susceptibility to natural killer cell mediated cell death","type":"exact"},{"name":"susceptibility to natural killer cell mediated cell killing","type":"exact"},{"name":"susceptibility to natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0042271"}


id: PBO:0074939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 104","termid":"PBO:0074939"}


id: GO:0019499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide metabolic process","synonyms":[{"name":"cyanide metabolism","type":"exact"}],"termid":"GO:0019499"}


id: PBO:0057831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3149","termid":"PBO:0057831"}


id: GO:2000909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sterol import.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"sterol import","termid":"GO:0035376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sterol import","synonyms":[{"name":"regulation of sterol influx","type":"exact"},{"name":"regulation of sterol uptake","type":"exact"}],"termid":"GO:2000909"}


id: PBO:0017546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme E1-type Uba42 (predicted)","termid":"PBO:0017546"}


id: PBO:0082856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homolog is TRAPPC4","termid":"PBO:0082856"}


id: PBO:0054431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1827","termid":"PBO:0054431"}


id: PBO:0077471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191B","termid":"PBO:0077471"}


id: GO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the 7-methylguanosine cap at the 5' end of a nascent messenger RNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding (obsolete GO:0003731)","synonyms":[{"name":"mRNA cap binding","type":"exact"}],"termid":"GO:0003731"}


id: GO:0098931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a the host cell flagellum. Some DNA bacterial viruses use flagella to attach to the host cell. This contact with the flagellum facilitates concentration of phage particles around the entry receptor on the bacterial cell surface.","definition_xrefs":["GOC:dos","VZ:3949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion attachment to host cell flagellum","termid":"GO:0098931"}


id: GO:0070925
data:
  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id: PBO:0079954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP6 N-terminal like","termid":"PBO:0079954"}


id: GO:0042495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a triacylated bacterial lipoprotein stimulus is received by a cell and converted into a molecular signal. Triacylated bacterial lipoproteins are lipopeptides of bacterial origin containing a nonprotein moiety consisting of three acyl groups.","definition_xrefs":["PMID:12524386","PMID:2757794","PMID:12077222","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of bacterial lipopeptide","termid":"GO:0070340"},{"relation_name":"is_a","term_name":"response to triacyl bacterial lipopeptide","termid":"GO:0071725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of triacyl bacterial lipopeptide","synonyms":[{"name":"detection of triacylated bacterial lipoprotein","type":"exact"},{"name":"perception of triacylated bacterial lipopeptide","type":"related"},{"name":"perception of triacylated bacterial lipoprotein","type":"related"}],"termid":"GO:0042495"}


id: GO:0045655
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte differentiation","termid":"GO:0045655"}


id: GO:1901032
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to reactive oxygen species","synonyms":[{"name":"down regulation of response to AOS","type":"exact"},{"name":"down regulation of response to ROI","type":"exact"},{"name":"down regulation of response to ROS","type":"exact"},{"name":"down regulation of response to active oxygen species","type":"exact"},{"name":"down regulation of response to reactive oxidative species","type":"exact"},{"name":"down regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down regulation of response to reactive oxygen species","type":"exact"},{"name":"down-regulation of response to AOS","type":"exact"},{"name":"down-regulation of response to ROI","type":"exact"},{"name":"down-regulation of response to ROS","type":"exact"},{"name":"down-regulation of response to active oxygen species","type":"exact"},{"name":"down-regulation of response to reactive oxidative species","type":"exact"},{"name":"down-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down-regulation of response to reactive oxygen species","type":"exact"},{"name":"downregulation of response to AOS","type":"exact"},{"name":"downregulation of response to ROI","type":"exact"},{"name":"downregulation of response to ROS","type":"exact"},{"name":"downregulation of response to active oxygen species","type":"exact"},{"name":"downregulation of response to reactive oxidative species","type":"exact"},{"name":"downregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"downregulation of response to reactive oxygen species","type":"exact"},{"name":"inhibition of response to AOS","type":"exact"},{"name":"inhibition of response to ROI","type":"exact"},{"name":"inhibition of response to ROS","type":"exact"},{"name":"inhibition of response to active oxygen species","type":"exact"},{"name":"inhibition of response to reactive oxidative species","type":"exact"},{"name":"inhibition of response to reactive oxygen intermediate","type":"exact"},{"name":"inhibition of response to reactive oxygen species","type":"narrow"},{"name":"negative regulation of response to AOS","type":"exact"},{"name":"negative regulation of response to ROI","type":"exact"},{"name":"negative regulation of response to ROS","type":"exact"},{"name":"negative regulation of response to active oxygen species","type":"exact"},{"name":"negative regulation of response to reactive oxidative species","type":"exact"},{"name":"negative regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901032"}


id: GO:0032478
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  {"annotated_genes":["SJAG_01865","SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88006,109928],"is_not":false,"summary":null,"term":"GO:0032478"}]},"cv_name":"cellular_component","definition":"A heterotetrameric complex located in the mitochondrial inner membrane that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms. In S. pombe it is a heterotetramer of Dlp1 and Dps1.","definition_xrefs":["PMID:14519123","PMID:16262699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739","GO:0032991"],"is_obsolete":false,"name":"heterotetrameric polyprenyl diphosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterotetrameric decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032478","terms_by_termid":{"GO:0032478":null}}


id: MOD:00320
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-glutamic acid residue by a thioether bond to form 4-(S-L-cysteinyl)-L-glutamic acid.","definition_xrefs":["ChEBI:20293","PubMed:11555656","RESID:AA0315","PubMed:11717396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(S-L-cysteinyl)-L-glutamic acid","synonyms":[{"name":"(2S,3S,7R)-2,7-diamino-4-carboxy-5-thiaoctanedioic acid","type":"exact"},{"name":"(2S,4S)-2-amino-4-[(R)-2-amino-2-carboxyethyl]sulfanylpentanedioic acid","type":"exact"},{"name":"4-(L-cystein-S-yl)-L-glutamic acid","type":"exact"},{"name":"CROSSLNK 4-cysteinyl-glutamic acid (Cys-Glu)","type":"exact"}],"termid":"MOD:00320"}


id: GO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal.","definition_xrefs":["PMID:19837031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}


id: GO:2000057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of Wnt signaling pathway involved in digestive tract morphogenesis.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt signaling pathway involved in digestive tract morphogenesis (obsolete GO:2000057)","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway involved in digestive tract morphogenesis","type":"exact"}],"termid":"GO:2000057"}


id: PBO:0029779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated_vegetative_cell","termid":"PBO:0029779"}


id: PBO:0059333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 2","termid":"PBO:0059333"}


id: PBO:0084246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner plaque spindle pole body (SPB) component; links the central plaque component Spc42p to the inner plaque component Spc110p; required for SPB duplication","termid":"PBO:0084246"}


id: PBO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related to S. pombe SPAC521.02 and S. cerevisiae YHR134W, but has an additional N-terminal ubiquitin family domain","termid":"PBO:0010216"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: GO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an inwardly rectifying potassium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"inward rectifier potassium channel inhibitor activity","termid":"GO:0070320"}


id: GO:0016024
data:
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id: GO:0047854
data:
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id: PBO:0079815
data:
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id: FYPO:0007600
data:
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id: GO:0060862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of floral organ abscission","termid":"GO:0060860"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of floral organ abscission","termid":"GO:0060862"}


id: GO:0048715
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oligodendrocyte differentiation.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell differentiation","termid":"GO:0045686"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte differentiation","termid":"GO:0048713"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte differentiation","synonyms":[{"name":"down regulation of oligodendrocyte differentiation","type":"exact"},{"name":"down-regulation of oligodendrocyte differentiation","type":"exact"},{"name":"downregulation of oligodendrocyte differentiation","type":"exact"},{"name":"inhibition of oligodendrocyte differentiation","type":"narrow"}],"termid":"GO:0048715"}


id: PBO:0040806
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase 2","termid":"PBO:0040806"}


id: PR:O74849
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght6 gene.","definition_xrefs":["UniProtKB:O74849","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity fructose transporter ght6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.13","synonyms":[{"name":"Spom972h-ght6","type":"exact"},{"name":"hexose transporter 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74849"}


id: GO:0010948
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id: GO:0090281
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id: PBO:0018291
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id: PATO:0002293
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id: GO:0034795
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id: GO:0009455
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id: PBO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UreD (predicted)","termid":"PBO:0000973"}


id: GO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-amino-4,6-dideoxy-D-glucose + 2-oxoglutarate = dTDP-4-dehydro-6-deoxy-D-glucose + L-glutamate.","definition_xrefs":["EC:2.6.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.33-RXN","RHEA:19085"],"synonyms":[{"name":"TDP-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"TDP-4-oxo-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase activity","type":"exact"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-4,6-dideoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-6-deoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose-glutamic transaminase activity","type":"related"}],"termid":"GO:0019179"}


id: PBO:0056476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 2","termid":"PBO:0056476"}


id: PBO:0050098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 8","termid":"PBO:0050098"}


id: GO:0007003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere binding (obsolete GO:0007003)","synonyms":[{"name":"telomere binding","type":"exact"}],"termid":"GO:0007003"}


id: PBO:0043024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP1B antisense RNA 1","termid":"PBO:0043024"}


id: GO:0141079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts an inflammasome-mediated signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:34155776","PMID:25538194","PMID:28331908","PMID:30872531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host inflammasome-mediated signal transduction","synonyms":[{"name":"perturbation of host inflammasome-mediated signal transduction","type":"broad"}],"termid":"GO:0141079"}


id: PBO:0049544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 7","termid":"PBO:0049544"}


id: PATO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-fertile","termid":"PATO:0001767"}


id: GO:0035668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor where the TRAM adaptor mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:14556004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor signaling pathway","synonyms":[{"name":"TRAM-dependent TLR signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0035668"}


id: PBO:0041200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog","termid":"PBO:0041200"}


id: GO:0034758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of iron ion transport","synonyms":[{"name":"activation of iron ion transport","type":"narrow"},{"name":"positive regulation of iron transport","type":"exact"},{"name":"stimulation of iron ion transport","type":"narrow"},{"name":"up regulation of iron ion transport","type":"exact"},{"name":"up-regulation of iron ion transport","type":"exact"},{"name":"upregulation of iron ion transport","type":"exact"}],"termid":"GO:0034758"}


id: PBO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase (predicted)","termid":"PBO:0002161"}


id: GO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosylglycerate + phosphate = glucose-1-phosphate + D-glycerate.","definition_xrefs":["GOC:imk","PMID:28754708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glucosylglycerate phosphorylase activity","termid":"GO:0110068"}


id: PBO:0089090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1","termid":"PBO:0089090"}


id: GO:0097255
data:
  {"annotated_genes":["SJAG_03036","SJAG_04355"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97857,108420],"is_not":false,"summary":null,"term":"GO:0097255"}]},"cv_name":"cellular_component","definition":"A highly conserved protein complex comprised of two ATP-dependent DNA helicases (Rvb1p and Rvb2p in yeast, Pontin52 and Reptin52 in humans), Pih1p in yeast or PIH1D1 in humans, and Tah1 in yeast or RPAP3 in humans. The complex associates with Hsp90 and is thought to have a role in assembly of large protein or protein/nucleic acid complexes. In this role it is involved in multiple processes such as box C/D snoRNP biogenesis, phosphatidylinositol-3 kinase-related protein kinase (PIKK) signaling, RNA polymerase II assembly, and others.","definition_xrefs":["GOC:mcc","PMID:15766533","PMID:21925213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03036":null,"SJAG_04355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"R2TP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097255","terms_by_termid":{"GO:0097255":null}}


id: PBO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor Rtf2","termid":"PBO:0000511"}


id: GO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which free ubiquitin chains, compounds composed of a large number of ubiquitin monomers, are broken down.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"free ubiquitin chain depolymerization","termid":"GO:0010995"}


id: PR:O74435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A centrin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.04","secondary_identifiers":["UniProtKB:O74435"],"synonyms":[{"name":"Spom972h-CETN3","type":"exact"}],"termid":"PR:O74435"}


id: GO:0009787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of abscisic acid (ABA) signaling.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to alcohol","termid":"GO:1905957"},{"relation_name":"regulates","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of abscisic acid-activated signaling pathway","synonyms":[{"name":"regulation of abscisic acid mediated signaling pathway","type":"related"},{"name":"regulation of abscisic acid mediated signalling","type":"exact"}],"termid":"GO:0009787"}


id: GO:2000855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mineralocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"regulates","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"}


id: PATO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"semi-fertile","termid":"PATO:0001767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-fertile","termid":"PATO:0001761"}


id: PBO:0082963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; non-essential gene that is induced in a GDH1 deleted strain with altered redox metabolism; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082963"}


id: SO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is intended for use in an experiment.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomaterial_region","synonyms":[{"name":"biomaterial region","type":"exact"}],"termid":"SO:0001409"}


id: PBO:0111788
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0111788"}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: PBO:0079745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial cancer associated 1","termid":"PBO:0079745"}


id: PBO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 2","termid":"PBO:0043670"}


id: PBO:0054820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2233","termid":"PBO:0054820"}


id: PBO:0089190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD family chromatin remodeller Hrp3","termid":"PBO:0089190"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: MOD:01470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (E)-dehydrobutyrine.","definition_xrefs":["PubMed:1547888","PubMed:3769923","RESID:AA0547","DeltaMass:0","PubMed:20805503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(E)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2E)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(E)-2-amino-2-butenoic acid","type":"exact"},{"name":"(E)-2-aminobutenoic acid","type":"exact"},{"name":"(E)-dehydrobutyrine","type":"exact"},{"name":"(E)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (E)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01470"}


id: GO:0051287
data:
  {"annotated_genes":["SJAG_00234","SJAG_04652","SJAG_00636","SJAG_04039","SJAG_00027","SJAG_02176","SJAG_04362","SJAG_02945","SJAG_01432","SJAG_01012","SJAG_00281","SJAG_00502","SJAG_06622","SJAG_03903","SJAG_02135","SJAG_03562","SJAG_01137","SJAG_01075","SJAG_06621","SJAG_00409","SJAG_02313","SJAG_00235","SJAG_04186","SJAG_03152","SJAG_03828"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90168,92539,94341,95941,97197,101011,101256,102354,102673,105138,105139,105140,105141,105142,105143,105144,105592,105593,105594,105595,105596,105597,105598,111945,113067,114631,114899],"is_not":false,"summary":null,"term":"GO:0051287"},{"annotations":[110970,100371,86265,110595,108152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070403"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00235":null,"SJAG_00281":null,"SJAG_00409":null,"SJAG_00502":null,"SJAG_00636":null,"SJAG_01012":null,"SJAG_01075":null,"SJAG_01137":null,"SJAG_01432":null,"SJAG_02135":null,"SJAG_02176":null,"SJAG_02313":null,"SJAG_02945":null,"SJAG_03152":null,"SJAG_03562":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04362":null,"SJAG_04652":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NAD binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051288"],"synonyms":[{"name":"NAD or NADH binding","type":"related"},{"name":"NAD+ or NADH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0051287","terms_by_termid":{"GO:0051287":null,"GO:0070403":null}}


id: PBO:0042324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 divergent transcript","termid":"PBO:0042324"}


id: PBO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 5","termid":"PBO:0045641"}


id: PBO:0076202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 12","termid":"PBO:0076202"}


id: GO:0010832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube differentiation","termid":"GO:0010832"}


id: PBO:0084836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial pyrimidine nucleotide transporter; imports pyrimidine nucleoside triphosphates and exports pyrimidine nucleoside monophosphates; member of the mitochondrial carrier family","termid":"PBO:0084836"}


id: PBO:0036172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036172"}


id: GO:2000678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}


id: PBO:0057952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3675","termid":"PBO:0057952"}


id: PBO:0045455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downregulated RNA in cancer, inhibitor of cell invasion and migration","termid":"PBO:0045455"}


id: GO:0099156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling in which the ligand is carried between cells by an exosome.","definition_xrefs":["GOC:dos","PMID:19837038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling via exosome","synonyms":[{"name":"exosome mediated","type":"exact"}],"termid":"GO:0099156"}


id: PR:Q9UT88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg8 gene.","definition_xrefs":["UniProtKB:Q9UT88","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.01c","synonyms":[{"name":"Spom972h-erg8","type":"exact"}],"termid":"PR:Q9UT88"}


id: PR:Q10095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.16c gene.","definition_xrefs":["UniProtKB:Q10095","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.16c","synonyms":[{"name":"Spom972h-SPAC11D3.16c","type":"exact"}],"termid":"PR:Q10095"}


id: PBO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase B","termid":"PBO:0051948"}


id: PBO:0060911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nexilin F-actin binding protein","termid":"PBO:0060911"}


id: PBO:0041141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4","termid":"PBO:0041141"}


id: PBO:0080943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygote arrest 1 like","termid":"PBO:0080943"}


id: PBO:0051066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-23 (non-functional)","termid":"PBO:0051066"}


id: FYPO:0002844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells which are septated, elongated, and have a larger than normal cell volume. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen elongated septated cells (obsolete FYPO:0002844)","synonyms":[{"name":"inviable microcolony, enlarged long septated vegetative cells","type":"related"},{"name":"inviable microcolony, large elongated septated vegetative cells","type":"related"},{"name":"inviable microcolony, swollen elongated septated vegetative cells","type":"exact"}],"termid":"FYPO:0002844"}


id: PBO:0081897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 848, pseudogene","termid":"PBO:0081897"}


id: PBO:0079308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4","termid":"PBO:0079308"}


id: PBO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_to_from_or_in","termid":"PBO:0034173"}


id: PBO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 3","termid":"PBO:0060828"}


id: GO:0047279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + UDP-D-galactose = 1-O-alpha-D-galactosyl-sn-glycerol 3-phosphate + H+ + UDP.","definition_xrefs":["EC:2.4.1.96","RHEA:20341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"sn-glycerol-3-phosphate 1-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00854","MetaCyc:2.4.1.96-RXN"],"synonyms":[{"name":"UDP-Gal:sn-glycero-3-phosphoric acid 1-alpha-galactosyl-transferase activity","type":"related"},{"name":"UDP-galactose:sn-glycerol-3-phosphate 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate alpha-D-galactosyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate 1alpha-galactosyltransferase activity","type":"related"},{"name":"isofloridoside-phosphate synthase activity","type":"related"},{"name":"uridine diphosphogalactose-glycerol phosphate galactosyltransferase activity","type":"related"}],"termid":"GO:0047279"}


id: GO:0043087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of GTP hydrolysis by a GTPase.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of GTPase activity","secondary_identifiers":["GO:0043088","GO:0032313","GO:0032312","GO:0032314","GO:0032315","GO:0032316","GO:0032317","GO:0032318","GO:0032319"],"synonyms":[{"name":"regulation of ARF GTPase activity","type":"narrow"},{"name":"regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"regulation of Rab GTPase activity","type":"narrow"},{"name":"regulation of Rac GTPase activity","type":"narrow"},{"name":"regulation of Ral GTPase activity","type":"narrow"},{"name":"regulation of Ran GTPase activity","type":"narrow"},{"name":"regulation of Rap GTPase activity","type":"narrow"},{"name":"regulation of Ras GTPase activity","type":"narrow"},{"name":"regulation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0043087"}


id: GO:0047224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-galactosalaminyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,3-N-acetyl-D-galactosaminyl-R + UDP.","definition_xrefs":["MetaCyc:2.4.1.147-RXN","EC:2.4.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosaminyl-R) beta-1,3-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"core 3-beta-GlcNAc-transferase activity","type":"related"},{"name":"core 3beta-GlcNAc-transferase activity","type":"related"},{"name":"mucin core 3 beta3-GlcNAc-transferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta(1->3)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047224"}


id: PBO:0028687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028687"}


id: PBO:0046517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid raft associated 1","termid":"PBO:0046517"}


id: GO:0140332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a lipopolysaccharide (LPS) from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"lipopolysaccharide transfer activity","synonyms":[{"name":"intermembrane LPS transporter activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transfer activity","type":"exact"},{"name":"intermembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"lipopolysaccharide carrier activity","type":"exact"}],"termid":"GO:0140332"}


id: PBO:0083499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YMC1/YPR058W","termid":"PBO:0083499"}


id: PBO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain (predicted)","termid":"PBO:0017006"}


id: PBO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin theta 1, pseudogene","termid":"PBO:0044856"}


id: PBO:0046018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK3 divergent transcript","termid":"PBO:0046018"}


id: FYPO:0005459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via nonhomologous end joining (NHEJ) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-strand break repair","termid":"FYPO:0005436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abolished double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abolished double-strand break repair via NHEJ","type":"exact"},{"name":"abolished double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"double-strand break repair via nonhomologous end joining abolished","type":"exact"}],"termid":"FYPO:0005459"}


id: PBO:0090710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin, implicated in vesicle-mediated transport, meiosis specific","termid":"PBO:0090710"}


id: PATO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000780 relative locomotor activity value (obsolete PATO:0000780)","termid":"PATO:0000780"}


id: GO:1900020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein kinase C activity.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"regulation of protein kinase C activity","termid":"GO:1900019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase C activity","synonyms":[{"name":"positive regulation of PKC","type":"related"},{"name":"positive regulation of PKC activity","type":"exact"},{"name":"up regulation of PKC","type":"related"},{"name":"up regulation of PKC activity","type":"exact"}],"termid":"GO:1900020"}


id: GO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the lung. The proximal/distal axis of the lung is defined by a line that runs from the trachea to the alveoli.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal axis specification","termid":"GO:0009946"},{"relation_name":"is_a","term_name":"lung pattern specification process","termid":"GO:0060432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung proximal/distal axis specification","termid":"GO:0061115"}


id: PBO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74B pseudogene 1","termid":"PBO:0042019"}


id: PBO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 1","termid":"PBO:0061832"}


id: PBO:0066055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C pseudogene 1","termid":"PBO:0066055"}


id: SO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of match parts.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000038 match_set (obsolete SO:0000038)","termid":"SO:0000038"}


id: PR:Q5FC18
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q5FC18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA-associated factor 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.14","synonyms":[{"name":"Spom972h-sgf11","type":"exact"}],"termid":"PR:Q5FC18"}


id: PBO:0017470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_after","termid":"PBO:0017470"}


id: GO:0008380
data:
  {"annotated_genes":["SJAG_01870","SJAG_05208","SJAG_01008","SJAG_03410","SJAG_04538","SJAG_03983","SJAG_03460","SJAG_01217","SJAG_04529","SJAG_02469","SJAG_00225","SJAG_00998","SJAG_01654","SJAG_03210","SJAG_00888","SJAG_04293","SJAG_01761","SJAG_01919","SJAG_01308","SJAG_01517","SJAG_00414","SJAG_02304","SJAG_05276","SJAG_05212","SJAG_02455","SJAG_00571","SJAG_01433","SJAG_01214","SJAG_05349","SJAG_00322","SJAG_02688","SJAG_01511","SJAG_00504","SJAG_03890","SJAG_02843","SJAG_04497","SJAG_02018","SJAG_03214","SJAG_04782","SJAG_01015","SJAG_05211","SJAG_02279","SJAG_02560","SJAG_02722","SJAG_00313","SJAG_01260","SJAG_02185","SJAG_05224","SJAG_05009","SJAG_00058","SJAG_00249","SJAG_03238","SJAG_01958","SJAG_02772","SJAG_04405","SJAG_03937","SJAG_00754","SJAG_02317","SJAG_02844","SJAG_04863","SJAG_03993","SJAG_03279","SJAG_04163","SJAG_00577","SJAG_02862","SJAG_04117","SJAG_01634","SJAG_05195","SJAG_04433","SJAG_01629","SJAG_02905","SJAG_00076","SJAG_04025","SJAG_00643","SJAG_01152","SJAG_02227","SJAG_01144","SJAG_04949","SJAG_01819","SJAG_05926","SJAG_04079","SJAG_00859","SJAG_01301","SJAG_04898","SJAG_00911","SJAG_01200","SJAG_03894","SJAG_00446","SJAG_04907","SJAG_03469","SJAG_02078","SJAG_05240","SJAG_02573","SJAG_03291","SJAG_01327","SJAG_00531","SJAG_03301","SJAG_04589","SJAG_16453","SJAG_01547","SJAG_00597","SJAG_01040","SJAG_04783","SJAG_03369","SJAG_02915","SJAG_01791","SJAG_03430","SJAG_00498","SJAG_03687","SJAG_03954","SJAG_00474","SJAG_01440","SJAG_04318","SJAG_03913","SJAG_00278","SJAG_00996","SJAG_00083","SJAG_03966","SJAG_01504","SJAG_03601","SJAG_03547","SJAG_03328","SJAG_05231","SJAG_00539","SJAG_04738","SJAG_02687","SJAG_02686","SJAG_04222","SJAG_03245","SJAG_01408","SJAG_03711","SJAG_03070","SJAG_01452","SJAG_05025","SJAG_00989","SJAG_03427","SJAG_04214","SJAG_04071","SJAG_00818","SJAG_04694","SJAG_01169","SJAG_02558","SJAG_00094","SJAG_02295","SJAG_03849","SJAG_00956","SJAG_03112","SJAG_02058","SJAG_01315","SJAG_02005","SJAG_02083","SJAG_00147","SJAG_00206","SJAG_04914","SJAG_04911","SJAG_03995","SJAG_02879","SJAG_01852","SJAG_01064","SJAG_01810","SJAG_00363","SJAG_04230","SJAG_03323","SJAG_01799","SJAG_00809","SJAG_00639","SJAG_01557","SJAG_02396","SJAG_05235","SJAG_03498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92134,104421,109764,92622,88285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000380"},{"annotations":[113961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[101940,96853,102571],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000349"},{"annotations":[105050,101021,105738,110533],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[94263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000372"},{"annotations":[105051,97413],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[91789,98880,87745,106842,111409,91361,102043,90188,108549,106251,106817,109460,94013,98719,106832,91104],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[99386],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[88868,114839,89129,101800,109255,58805,84747,99387,100845,88873,96854,92161,91362,92135,91575,111372,88286,99337,105739,84013,98720,95210,88548,97414,98645,92343,92623,104422,106252,91367,87604,109643,105974,106240,91980,109284,110036,108632,78421,102935,99193,83667,93853,101686,103343,104066,109353,89289,112032,113179,99199,86162,94621,107460,106698,85680,107709,111101,94193,102572,105414,91558,91516,85739,93584,89493,101119,89225,88483,107965,110534,89769,89069,90344,102605,114535,105052,111148,113036,96793,100683,103827,107886,110528,101998,86812,87979,110027,104949,97909,104859,88334,90905,105694,104718,98356,107923,114103,108837,102513,112126,111410,114674,99164,91105,109067,105939,98815,98875,101022,98586,94962,106818,89554,91177,88848,102721,92009,102044,92387,113361,101812,85207,92508,91790,111024,86438,91730,99371,115010,101659,93019,112571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045292"},{"annotations":[73394,103115],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[98357,107461,97910,90345,89130,86163,101023,108633,89494,93854,104950,99372,91731,92509,93020,104067,85740,92344,98876,94194,101999,102606,107924,105695,96855,102722,109285,112127,101813,103828,113362,89226,103344,91517,95211,101687,105415,107887,114104,89555,115011,84014,99194,105053,84748,91576,102573,91981,106241,111149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000398"},{"annotations":[114536],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[74384,88342,73001,92510,107107],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0048026"},{"annotations":[91559],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0000381"},{"annotations":[94747],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"},{"annotations":[89927,114840],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0048024"},{"annotations":[94877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000376"},{"annotations":[99200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034247"},{"annotations":[97911,107316,74919,89556,107109,104951,99388,91519,101660],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000245"},{"annotations":[110047,84015,86397,85208,100685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000390"},{"annotations":[96794,94195],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000393"},{"annotations":[97468,106253,91791,91363,109461,106819,85681,105171,87829,100721,102045,111279,98721,93021,92162,104721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000387"},{"annotations":[98358,93585,107888,101661,102725,108431,110559,94196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000244"},{"annotations":[96795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000388"},{"annotations":[89650,91833,86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006388"},{"annotations":[96965,97504,102092,113812],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"},{"annotations":[102936,108634,110037],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 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splicing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:RNA_splicing","GO:0006395"],"synonyms":[{"name":"pre-mRNA splicing factor activity","type":"related"}],"termid":"GO:0008380","terms_by_termid":{"GO:0000244":null,"GO:0000245":null,"GO:0000348":null,"GO:0000349":null,"GO:0000350":null,"GO:0000354":null,"GO:0000372":null,"GO:0000376":null,"GO:0000379":null,"GO:0000380":null,"GO:0000381":null,"GO:0000387":null,"GO:0000388":null,"GO:0000389":null,"GO:0000390":null,"GO:0000393":null,"GO:0000395":null,"GO:0000398":null,"GO:0006376":null,"GO:0006388":null,"GO:0034247":null,"GO:0045292":null,"GO:0048024":null,"GO:0048026":null,"GO:1903241":null,"GO:1905744":null,"GO:1905746":null}}


id: PBO:0078267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 3-1","termid":"PBO:0078267"}


id: PBO:0068885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 126, pseudogene","termid":"PBO:0068885"}


id: PBO:0036527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin (predicted)","termid":"PBO:0036527"}


id: MOD:00561
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12766232","Unimod:211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:00561"}


id: PBO:0083532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SPT4/YGR063C","termid":"PBO:0083532"}


id: FYPO:0004910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is localized normally (i.e. indistinguishably from wild type) to discrete regions in the nucleus, visible as foci or dots by microscopy.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal punctate nuclear protein localization","synonyms":[{"name":"normal punctate nuclear protein localisation","type":"exact"},{"name":"normal punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"normal punctate nuclear protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0004910"}


id: PBO:0043112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"churchill domain containing 1","termid":"PBO:0043112"}


id: PBO:0038389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_protein","termid":"PBO:0038389"}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: FYPO:0001451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to freezing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to cold","termid":"FYPO:0001450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to freezing","synonyms":[{"name":"increased growth during cellular response to freezing","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to freezing","type":"exact"},{"name":"resistance to freezing during mitotic cell cycle","type":"related"},{"name":"resistance to freezing during vegetative growth","type":"exact"},{"name":"resistant to freeze-thawing","type":"related"},{"name":"resistant to freezing","type":"exact"}],"termid":"FYPO:0001451"}


id: GO:0070455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of heme biosynthetic process","synonyms":[{"name":"activation of heme biosynthetic process","type":"narrow"},{"name":"positive regulation of haem biosynthetic process","type":"exact"},{"name":"positive regulation of heme anabolism","type":"exact"},{"name":"positive regulation of heme biosynthesis","type":"exact"},{"name":"positive regulation of heme formation","type":"exact"},{"name":"positive regulation of heme synthesis","type":"exact"},{"name":"stimulation of heme biosynthetic process","type":"narrow"},{"name":"up regulation of heme biosynthetic process","type":"exact"},{"name":"up-regulation of heme biosynthetic process","type":"exact"},{"name":"upregulation of heme biosynthetic process","type":"exact"}],"termid":"GO:0070455"}


id: PBO:0091959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase","termid":"PBO:0091959"}


id: GO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + magnesium protoporphyrin IX = S-adenosyl-L-homocysteine + H+ + magnesium protoporphyrin IX 13-monomethyl ester.","definition_xrefs":["RHEA:17809","EC:2.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"magnesium protoporphyrin IX methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04237","MetaCyc:RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN"],"synonyms":[{"name":"(-)-S-adenosyl-L-methionine:magnesium-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"Mg-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Mg protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin-IX O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-magnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosylmethioninemagnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"magnesium-protoporphyrin O-methyltransferase activity","type":"exact"}],"termid":"GO:0046406"}


id: GO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"1-methylguanosine metabolic process","termid":"GO:0080179"}


id: FYPO:0007326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial tRNA 3'-end processing is decreased. In mitochondrial tRNA 3'-end processing, the 3' end of a mitochondrial pre-tRNA molecule is converted to that of a mature mitochondrial tRNA.","definition_xrefs":["PomBase:mah","GO:0006396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial RNA 3'-end processing","termid":"FYPO:0004956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"decreased mitochondrial tRNA 3'-end processing","synonyms":[{"name":"decreased mitochondrial tRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial tRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transfer RNA 3'-end processing","type":"exact"},{"name":"reduced mitochondrial tRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0007326"}


id: GO:1902529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein linear polyubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein linear polyubiquitination","termid":"GO:1902528"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein linear polyubiquitination","termid":"GO:0097039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein linear polyubiquitination","synonyms":[{"name":"down regulation of M1 linkage","type":"narrow"},{"name":"down regulation of protein linear polyubiquitination","type":"exact"},{"name":"down-regulation of M1 linkage","type":"narrow"},{"name":"down-regulation of protein linear polyubiquitination","type":"exact"},{"name":"downregulation of M1 linkage","type":"narrow"},{"name":"downregulation of protein linear polyubiquitination","type":"exact"},{"name":"inhibition of M1 linkage","type":"narrow"},{"name":"inhibition of protein linear polyubiquitination","type":"narrow"},{"name":"negative regulation of M1 linkage","type":"narrow"}],"termid":"GO:1902529"}


id: GO:1990091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sodium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sodium-dependent self proteolysis","termid":"GO:1990091"}


id: FYPO:0003087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at a replication fork barrier in the mating-type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at mating-type region replication fork barrier","termid":"FYPO:0003087"}


id: FYPO:0000499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitophagy","synonyms":[{"name":"abolished autophagy of mitochondrion","type":"exact"},{"name":"absent mitophagy","type":"exact"},{"name":"mitophagy abolished","type":"exact"},{"name":"mitophagy: absent","type":"related"}],"termid":"FYPO:0000499"}


id: PBO:0082101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase and SNARE disassembly chaperone; required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, autophagy, and protein secretion; releases Sec17p from SNAP complexes; has similarity to mammalian N-ethylmaleimide-sensitive factor (NSF)","termid":"PBO:0082101"}


id: GO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mercury (Hg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"},{"relation_name":"part_of","term_name":"detoxification of mercury ion","termid":"GO:0050787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0098754","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mercury ion transport","synonyms":[{"name":"mercuric ion transport","type":"narrow"},{"name":"mercury transport","type":"exact"}],"termid":"GO:0015694"}


id: GO:0035001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of epithelial tubes that originate from pits in an open tracheal system and grow towards each other to meet and form a continuous open tube called the dorsal trunk. The dorsal trunk extends from the anterior spiracle to the posterior spiracle of the larva and forms the main airway of the insect tracheal system.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal trunk growth, open tracheal system","synonyms":[{"name":"dorsal trunk growth","type":"related"}],"termid":"GO:0035001"}


id: PATO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's having two or more cell populations that differ in genetic makeup. This situation can affect any type of cell, including blood cells, gametes (egg and sperm cells), and skin.","definition_xrefs":["Medline:http://www.nlm.nih.gov/medlineplus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaicism","synonyms":[{"name":"heterogeneity","type":"related"}],"termid":"PATO:0002048"}


id: PR:P40995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd1 gene.","definition_xrefs":["UniProtKB:P40995","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor scd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.09","synonyms":[{"name":"Spom972h-scd1","type":"exact"}],"termid":"PR:P40995"}


id: GO:0160075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a non-canonical inflammasome complex.","definition_xrefs":["PMID:27291964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"}


id: PBO:0087417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 7 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; oriented facing the mitochondrial matrix; N-terminus appears to play a role in complex assembly","termid":"PBO:0087417"}


id: GO:0120049
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91369],"is_not":false,"summary":null,"term":"GO:0120049"}]},"cv_name":"biological_process","definition":"The posttranscriptional N6-methylation of an adenine residue in an snRNA molecule.","definition_xrefs":["PMID:28525753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA (adenine-N6)-methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120049","terms_by_termid":{"GO:0120049":null}}


id: GO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which sodium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium channel complex","termid":"GO:0034706"}


id: PBO:0056352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 domain containing 1","termid":"PBO:0056352"}


id: GO:0039670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A turret-like appendage formed at the vertices of an icosahedral capsid.","definition_xrefs":["GOC:jh2","PMID:20592081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, decoration","termid":"GO:0098021"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, turret","termid":"GO:0039670"}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: FYPO:0002485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of two meiotic reciprocal recombination events (crossovers) close to each other is decresed. As a result, the resolution of meiotic recombination intermediates results in the formation of a crossover at a lower frequency than normal, and the occurrence of intergenic meiotic recombination is decreased.","definition_xrefs":["PMID:16169489","PMID:22723423","PomBase:gs","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"decreased intergenic meiotic recombination","secondary_identifiers":["FYPO:0003180"],"synonyms":[{"name":"decreased meiotic intergenic recombination","type":"exact"},{"name":"decreased occurrence of meiotic cross-overs","type":"related"},{"name":"decreased resolution of meiotic recombination intermediates with crossover formation","type":"exact"},{"name":"reduced intergenic meiotic recombination","type":"exact"},{"name":"reduced resolution of meiotic recombination intermediates with crossover formation","type":"exact"}],"termid":"FYPO:0002485"}


id: GO:0001411
data:
  {"annotated_genes":["SJAG_04960","SJAG_04624","SJAG_03011","SJAG_03625","SJAG_01196","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115384,115386,115388,115390,115392,115394],"is_not":false,"summary":null,"term":"GO:0001411"}]},"cv_name":"cellular_component","definition":"The end, or tip, of a fungal hypha, where polarized growth occurs during hyphal elongation.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_03011":null,"SJAG_03625":null,"SJAG_03915":null,"SJAG_04624":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal tip","references_by_uniquename":{"PMID:30726171":null},"termid":"GO:0001411","terms_by_termid":{"GO:0001411":null}}


id: GO:0110113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF","PMID:27365390","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"regulation of lipid transporter activity","termid":"GO:0110112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipid transporter activity","termid":"GO:0110113"}


id: FYPO:0007586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in the medial membrane band is abnormal.","definition_xrefs":["GO:0032178","PomBase:mah","PMID:15517003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane sterol distribution","termid":"FYPO:0000135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal medial membrane band sterol distribution","synonyms":[{"name":"abnormal medial membrane band sterol distribution during mitotic cell cycle","type":"related"},{"name":"abnormal medial membrane band sterol distribution during vegetative growth","type":"exact"},{"name":"abnormal medial membrane domain sterol distribution","type":"exact"}],"termid":"FYPO:0007586"}


id: GO:0099069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a synaptic vesicle membrane and a the preseynaptic membrane active zone. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. This process is distinct from and prior to synaptic vesicle priming and fusion.","definition_xrefs":["GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"synaptic vesicle docking","termid":"GO:0016081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0023052","GO:0140056"],"is_obsolete":false,"name":"synaptic vesicle tethering involved in synaptic vesicle exocytosis","termid":"GO:0099069"}


id: PBO:0049463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin A (MNS blood group)","termid":"PBO:0049463"}


id: PBO:0069412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 673, pseudogene","termid":"PBO:0069412"}


id: GO:0071159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of a homo- or heterodimer of members of a family of structurally related proteins that contain a conserved N-terminal region called the Rel homology domain (RHD). In the nucleus, NF-kappaB complexes act as transcription factors. In unstimulated cells, NF-kappaB dimers are sequestered in the cytoplasm by IkappaB monomers; signals that induce NF-kappaB activity cause degradation of IkappaB, allowing NF-kappaB dimers to translocate to the nucleus and induce gene expression.","definition_xrefs":["ISBN:0849327946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"NF-kappaB complex","termid":"GO:0071159"}


id: GO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose 1,5-bisphosphate, the diphosphorylated sugar 1,5-diphospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 1,5-bisphosphate metabolic process","synonyms":[{"name":"deoxyribose 1,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:0046387"}


id: SOFP:organism
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The name of the organism","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organism","termid":"SOFP:organism"}


id: SO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat variant containing more repeat units than the reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_change","termid":"SO:0002161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_expansion","synonyms":[{"name":"short tandem repeat expansion","type":"exact"},{"name":"str expansion","type":"exact"}],"termid":"SO:0002162"}


id: GO:0141010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism mediated by RNA-directed DNA methylation. RNA-directed DNA methylation is a gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:36570931","PMID:32719317","PMID:28633017","PMID:32381626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene silencing by siRNA-directed DNA methylation","termid":"GO:0080188"},{"relation_name":"is_a","term_name":"retrotransposon silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"retrotransposon silencing by siRNA-directed DNA methylation","synonyms":[{"name":"retrostransposon silencing by RdDM","type":"exact"},{"name":"retrotransposon silencing by RNA-directed DNA methylation","type":"related"}],"termid":"GO:0141010"}


id: GO:1901543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901542"},{"relation_name":"negatively_regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"down regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"inhibition of ent-pimara-8(14),15-diene anabolism","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene biosynthesis","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene biosynthetic process","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene formation","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene synthesis","type":"narrow"},{"name":"negative regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901543"}


id: PBO:0053302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-9 DREAM MuvB core complex component","termid":"PBO:0053302"}


id: GO:0075524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A translation process in which a specific viral peptide prevents the ribosome from covalently linking a new inserted amino acid, and lets it continue translation, thereby cleaving the nascent protein while allowing translation to continue.","definition_xrefs":["GOC:ch","VZ:914","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribosomal skipping","termid":"GO:0075524"}


id: PBO:0080728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW and C2 domain containing 2","termid":"PBO:0080728"}


id: PBO:0081586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 513","termid":"PBO:0081586"}


id: PBO:0057018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 106a","termid":"PBO:0057018"}


id: GO:1990968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of a viral gene product binding to RNA.","definition_xrefs":["GOC:bf","PMID:25116364","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"modulation by host of viral molecular function","termid":"GO:0044868"},{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of RNA binding by virus","synonyms":[{"name":"modulation by host of viral protein:RNA interaction","type":"related"}],"termid":"GO:1990968"}


id: GO:0071030
data:
  {"annotated_genes":["SJAG_01331","SJAG_02879","SJAG_02005","SJAG_04500","SJAG_00456","SJAG_02382","SJAG_04025","SJAG_05243","SJAG_04768","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83727,85055,86991,88549,91178,102474,105440,105975,111703,114232],"is_not":false,"summary":null,"term":"GO:0071030"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly spliced pre-mRNAs within the nucleus.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_01331":null,"SJAG_02005":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_04500":null,"SJAG_04768":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"nuclear mRNA surveillance of spliceosomal pre-mRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA catabolic process of incorrectly spliced pre-mRNA","type":"exact"},{"name":"nuclear mRNA quality control of incorrectly spliced pre-mRNA","type":"exact"}],"termid":"GO:0071030","terms_by_termid":{"GO:0071030":null}}


id: PBO:0068491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 75, pseudogene","termid":"PBO:0068491"}


id: GO:0019199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0038023","GO:0140096","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"transmembrane receptor protein kinase activity","secondary_identifiers":["Reactome:R-HSA-8983063","Reactome:R-HSA-8983059"],"termid":"GO:0019199"}


id: PATO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keel-shaped","termid":"PATO:0002522"}


id: PBO:0042784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 128","termid":"PBO:0042784"}


id: PBO:0076886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 37","termid":"PBO:0076886"}


id: PR:O14139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chromodomain-helicase-DNA-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase hrp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.01","secondary_identifiers":["UniProtKB:O14139"],"synonyms":[{"name":"ATP-dependent helicase hrp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CHD2","type":"exact"}],"termid":"PR:O14139"}


id: PBO:0066879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 179","termid":"PBO:0066879"}


id: GO:1900622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in positive regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:9407036","GOC:BHF","GOC:dgf","PMID:9407035"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900622)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"calcineurin-dependent transcription activation","type":"narrow"},{"name":"calcineurin-dependent transcriptional induction","type":"narrow"},{"name":"calcineurin-mediated activation of transcription","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"}],"termid":"GO:1900622"}


id: PBO:0034654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034654"}


id: PATO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000550 red light sensitivity value (obsolete PATO:0000550)","termid":"PATO:0000550"}


id: FYPO:0001129
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[115585,115588,115559,115589,115565,115558,115568,115584,115569,115582,115586,115566,115587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[115561],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_05207"],"name":"abnormal protein localization to nucleus during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03783","SJAG_05207","SJAG_01745","SJAG_04489","SJAG_03892","SJAG_01050"],"single_locus_genotype_uniquenames":["Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","nur1delta","did4delta","vps4delta","lem2delta","vps24delta","cmp7delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"abnormal protein localization to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001129","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0003657":null,"FYPO:0007073":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0032595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"B cell receptor transport within lipid bilayer","synonyms":[{"name":"B cell receptor translocation within membrane","type":"exact"},{"name":"BCR translocation within membrane","type":"exact"},{"name":"BCR transport within lipid bilayer","type":"exact"}],"termid":"GO:0032595"}


id: PBO:0081071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 4","termid":"PBO:0081071"}


id: PBO:0028301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity_during_mitosis","termid":"PBO:0028301"}


id: GO:0047121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + isoquinoline = AH(2) + isoquinolin-1(2H)-one.","definition_xrefs":["EC:1.3.99.16","RHEA:11588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"isoquinoline 1-oxidoreductase activity","secondary_identifiers":["KEGG_REACTION:R05151","MetaCyc:1.3.99.16-RXN"],"synonyms":[{"name":"isoquinoline:acceptor 1-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0047121"}


id: PBO:0074164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G1","termid":"PBO:0074164"}


id: PBO:0039825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor interacting protein 2","termid":"PBO:0039825"}


id: GO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of very long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a very long-chain fatty-acyl group. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty-acyl-CoA metabolic process","termid":"GO:0036111"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006790","GO:0006629","GO:0055086"],"is_obsolete":false,"name":"very long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"very long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"very long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"very long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036113"}


id: PBO:0039986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1","termid":"PBO:0039986"}


id: FYPO:0005828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"},{"relation_name":"is_a","term_name":"normal protein transport along microtubule during vegetative growth","termid":"FYPO:0005827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"normal protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005828"}


id: GO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as major basic protein, eosinophil peroxidase, and eosinophil cationic protein by an eosinophil.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"eosinophil activation involved in immune response","termid":"GO:0002278"},{"relation_name":"part_of","term_name":"eosinophil mediated immunity","termid":"GO:0002447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"eosinophil degranulation","synonyms":[{"name":"eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043308"}


id: PBO:0082668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cytosolic Fe-S protein assembly (CIA) machinery; contains an Fe-S cluster that receives electrons from NADPH via the action of Tah18p in an early step in the CIA pathway; ortholog of human Ciapin1; protein abundance increases in response to DNA replication stress; inviability of the null mutant is functionally complemented by human CIAPIN1","termid":"PBO:0082668"}


id: FYPO:0002982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation during vegetative growth (obsolete FYPO:0002982)","synonyms":[{"name":"abolished peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation during mitotic cell cycle","type":"related"},{"name":"protein serine phosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002982"}


id: PBO:0084151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity nicotinamide riboside transporter; also transports thiamine with low affinity; major transporter for 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine) uptake; shares sequence similarity with Thi7p and Thi72p; proposed to be involved in 5-fluorocytosine sensitivity","termid":"PBO:0084151"}


id: PBO:0076837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 4","termid":"PBO:0076837"}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["PMID:28320827","GOC:krc","PMID:15890777","PMID:17047368","PMID:22122073","PMID:25565961","PMID:32616437","PMID:15286082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: PATO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An achromatic color of maximum brightness; the color of objects that reflect nearly all light of all visible wavelengths.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white","synonyms":[{"name":"whitish","type":"related"}],"termid":"PATO:0000323"}


id: PBO:0043303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 20A","termid":"PBO:0043303"}


id: PATO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000229 olfactory (obsolete PATO:0000229)","termid":"PATO:0000229"}


id: GO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cadmium sensitivity/resistance (obsolete GO:0019830)","synonyms":[{"name":"cadmium sensitivity/resistance","type":"exact"}],"termid":"GO:0019830"}


id: GO:0072024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the macula densa over time, from its formation to the mature structure. The macula densa is an area of specialized cells in the distal tubule that makes contact with the vascular pole of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macula densa development","termid":"GO:0072024"}


id: PBO:0067244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 317, pseudogene","termid":"PBO:0067244"}


id: PBO:0067250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 323, pseudogene","termid":"PBO:0067250"}


id: GO:0008297
data:
  {"annotated_genes":["SJAG_05373","SJAG_05280","SJAG_02908","SJAG_01648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103534,84783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[107768,93312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_02908":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0004527","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"single-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008297","terms_by_termid":{"GO:0008310":null,"GO:0045145":null}}


id: PBO:0069671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 948, pseudogene","termid":"PBO:0069671"}


id: GO:0061594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 6-deoxy-6-sulfofructose + ATP = 6-deoxy-6-sulfofructose-1-phosphate + ADP.","definition_xrefs":["PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-deoxy-6-sulfofructose kinase activity","secondary_identifiers":["MetaCyc:RXN-15297","EC:2.7.1.184","RHEA:40443"],"termid":"GO:0061594"}


id: PBO:0078832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-3","termid":"PBO:0078832"}


id: GO:0150076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction by neural vertebrate tissue to infection or injury caused by chemical or physical agents.","definition_xrefs":["PMID:10981966","GOC:bc","GOC:aruk","PMID:11099416","PMID:18164423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroinflammatory response","synonyms":[{"name":"nerve tissue inflammatory response","type":"exact"},{"name":"nervous tissue inflammatory response","type":"exact"},{"name":"neural tissue inflammatory response","type":"exact"}],"termid":"GO:0150076"}


id: GO:0010376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the stomatal complex. This process pertains to the initial formation of a structure from unspecified parts. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stomatal complex morphogenesis","termid":"GO:0010103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex formation","termid":"GO:0010376"}


id: PBO:0062488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 4","termid":"PBO:0062488"}


id: PBO:0080570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDFY3 antisense RNA 2","termid":"PBO:0080570"}


id: PBO:0052312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0753","termid":"PBO:0052312"}


id: GO:0033459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033459"}


id: PBO:0072859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain containing ribonucleoprotein","termid":"PBO:0072859"}


id: GO:0034512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a box C/D small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"box C/D sno(s)RNA binding","synonyms":[{"name":"box C/D sRNA binding","type":"narrow"},{"name":"box C/D snoRNA binding","type":"narrow"}],"termid":"GO:0034512"}


id: GO:0040027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:kmv","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vulval development","termid":"GO:0040028"},{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"negatively_regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vulval development","synonyms":[{"name":"down regulation of vulval development","type":"exact"},{"name":"down-regulation of vulval development","type":"exact"},{"name":"downregulation of vulval development","type":"exact"},{"name":"inhibition of vulval development","type":"narrow"}],"termid":"GO:0040027"}


id: PATO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000705 relative threshold value (obsolete PATO:0000705)","termid":"PATO:0000705"}


id: PBO:0083884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferrioxamine B transporter; member of the ARN family of transporters that specifically recognize siderophore-iron chelates; transcription is induced during iron deprivation and diauxic shift; potentially phosphorylated by Cdc28p","termid":"PBO:0083884"}


id: GO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a nephrogenic mesenchyme from an initial condition to its mature state. This process begins with the formation of nephrogenic mesenchyme and ends with the mature structure. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme development","termid":"GO:0072076"}


id: GO:0062177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the radial spoke, a protein complex that links the outer microtubule doublet of the ciliary or flagellum axoneme with the sheath that surrounds the central pair of microtubules.","definition_xrefs":["PMID:27940518","PMID:21613541","PMID:24124175","PMID:8408197","PMID:21692193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"radial spoke assembly","termid":"GO:0062177"}


id: GO:1990045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sclerotium over time, from its formation to the mature structure. A sclerotium is a mycelial resting body, resistant to adverse environmental conditions.","definition_xrefs":["PMID:21148914","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerotium development","termid":"GO:1990045"}


id: PBO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, with meiosis specific splicing","termid":"PBO:0002758"}


id: PBO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily F member 1","termid":"PBO:0052128"}


id: GO:0022851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when GABA has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0038023","GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"GABA-gated chloride ion channel activity","termid":"GO:0022851"}


id: PBO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2","termid":"PBO:0090487"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:bc","GOC:mah","PMID:26412237","GOC:BHF","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: PBO:0064354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PM20D1 antisense RNA 1","termid":"PBO:0064354"}


id: GO:1903071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17872946","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903071)","termid":"GO:1903071"}


id: FYPO:0005022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein to the actomyosin contractile ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000138","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of protein localization to actomyosin contractile ring","synonyms":[{"name":"decreased rate of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"decreased rate of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"decreased rate of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"decreased rate of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"decreased rate of protein localization to mitotic contractile ring","type":"exact"},{"name":"decreased rate of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"reduced rate of protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0005022"}


id: GO:1905018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["PMID:1665486","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of methionine-tRNA ligase activity (obsolete GO:1905018)","synonyms":[{"name":"regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"regulation of MetRS activity","type":"exact"},{"name":"regulation of methionine translase activity","type":"exact"},{"name":"regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905018"}


id: PBO:0085952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is resistant to 2-deoxy-D-glucose and displays abnormally elongated buds; DGR2 has a paralog, YMR102C, that arose from the whole genome duplication","termid":"PBO:0085952"}


id: PBO:0073167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS binding protein 2 like","termid":"PBO:0073167"}


id: GO:0009605
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to environmental stimulus","type":"exact"}],"termid":"GO:0009605","terms_by_termid":{"GO:0050982":null}}


id: PBO:0046885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member A","termid":"PBO:0046885"}


id: GO:0052401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of reactive oxygen species as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont reactive oxygen species production (obsolete GO:0052401)","synonyms":[{"name":"activation by organism of defense-related symbiont AOS production","type":"exact"},{"name":"activation by organism of defense-related symbiont ROI production","type":"exact"},{"name":"activation by organism of defense-related symbiont ROS production","type":"exact"},{"name":"activation by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"activation by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"activation by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxidative species production","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"activation by organism of defense-related symbiont respiratory burst","type":"exact"},{"name":"induction by organism of defense-related symbiont AOS production","type":"exact"},{"name":"induction by organism of defense-related symbiont ROI production","type":"exact"},{"name":"induction by organism of defense-related symbiont ROS production","type":"exact"},{"name":"induction by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"induction by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"induction by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"induction by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"induction by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"induction by organism of defense-related symbiont respiratory burst","type":"exact"}],"termid":"GO:0052401"}


id: MOD:00262
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a peptide bond between a C-terminal L-glutamic acid residue and a free L-tyrosine.","definition_xrefs":["ChEBI:21477","PubMed:8093886","RESID:AA0257","PubMed:6387372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-glutamyl)-L-tyrosine","synonyms":[{"name":"(S,S)-2-(2-aminopentanedio-1-yl)amino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"L-glutamyl L-tyrosine","type":"exact"},{"name":"N-(L-glutamyl)-L-tyrosine","type":"exact"},{"name":"SITE Involved in polymerization","type":"exact"}],"termid":"MOD:00262"}


id: GO:0021911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the synthesis and degradation of retionic acid that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GOC:dph","PMID:11262869","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"retinoic acid metabolic process in spinal cord anterior-posterior patterning","synonyms":[{"name":"retinoic acid metabolism in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021911"}


id: PBO:0111919
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-SWIM","termid":"PBO:0111919"}


id: PBO:0071566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 32","termid":"PBO:0071566"}


id: PBO:0043640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 3","termid":"PBO:0043640"}


id: PBO:0004321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitrophenylphosphatase","termid":"PBO:0004321"}


id: PBO:0029851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029851"}


id: PBO:0062381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 4","termid":"PBO:0062381"}


id: PBO:0082460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cadmium transporting P-type ATPase; may also have a role in copper and iron homeostasis; stabilized by Cd binding, which prevents ubiquitination; S288C and other lab strains contain a G970R mutation which eliminates Cd transport function","termid":"PBO:0082460"}


id: PR:Q9USP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mto2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C902.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.06","synonyms":[{"name":"Spom972h-mto2","type":"exact"}],"termid":"PR:Q9USP7"}


id: PBO:0067814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 116","termid":"PBO:0067814"}


id: FYPO:0004706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer monomeric ribosomes (80S monosomes) in the cytosol than normal.","definition_xrefs":["PMID:26122634","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at decreased level","type":"exact"},{"name":"decreased cytosolic 80S monosome level","type":"exact"},{"name":"decreased cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"decreased cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"decreased cytosolic ribosome level","type":"broad"},{"name":"decreased level of cytosolic monomeric ribosomes","type":"exact"},{"name":"reduced cytosolic monomeric ribosome level","type":"exact"}],"termid":"FYPO:0004706"}


id: GO:0150142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD86 production","termid":"GO:0150140"},{"relation_name":"positively_regulates","term_name":"CD86 biosynthetic process","termid":"GO:0035781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD86 production","synonyms":[{"name":"positive regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150142"}


id: PBO:0110196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex associated protein","termid":"PBO:0110196"}


id: PBO:0056700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEIS1 antisense RNA 3","termid":"PBO:0056700"}


id: GO:0102999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 2-hydroxylamino-4,6-dinitrotoluene = 2-hydroxylamino-4,6-dinitrotoluene-O-glucoside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose:2-hydroxylamino-4,6-dinitrotoluene-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9743"],"termid":"GO:0102999"}


id: GO:0007122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete loss of asymmetric budding (obsolete GO:0007122)","synonyms":[{"name":"loss of asymmetric budding","type":"exact"}],"termid":"GO:0007122"}


id: PBO:0045430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L1 pseudogene 1","termid":"PBO:0045430"}


id: PBO:0028657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex-dependent_proteasomal_ubiquitin-dependent_protein_catabolic_process","termid":"PBO:0028657"}


id: PBO:0028968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_superoxide_dismutase_activity","termid":"PBO:0028968"}


id: PBO:0082909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulfurase (Nfs1p) activator; essential for the formation of the persulfide intermediate at the desulfurase active site during pyridoxal phosphate-dependent desulfuration of cysteine; required for mitochondrial iron-sulfur cluster biosynthesis; exclusive to eukaryotes, implicated as eukaryotic supplement to the bacterium-derived Fe-S cluster (ISC) assembly apparatus; involved in regulation of iron metabolism; member of the LYR protein family","termid":"PBO:0082909"}


id: PBO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly ADAM family peptidase Mde10","termid":"PBO:0001166"}


id: PBO:0065666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRN2 antisense RNA 1","termid":"PBO:0065666"}


id: PBO:0002743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AMSH/STAMBP protein homolog, ubiquitin specific-protease","termid":"PBO:0002743"}


id: RO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"},{"relation_name":"is_a","term_name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"RO:0002326"}


id: PBO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein Moa1","termid":"PBO:0002201"}


id: PBO:0088792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication termination factor Rtf2","termid":"PBO:0088792"}


id: GO:0010476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of gibberellin stimulus.","definition_xrefs":["PMID:17521411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to gibberellin stimulus","termid":"GO:0071370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gibberellin mediated signaling pathway","synonyms":[{"name":"gibberellin-mediated signalling","type":"exact"}],"termid":"GO:0010476"}


id: PBO:0063328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 4","termid":"PBO:0063328"}


id: GO:0003018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory process that occurs at the level of the vasculature.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular process in circulatory system","synonyms":[{"name":"vasculature process","type":"exact"}],"termid":"GO:0003018"}


id: PBO:0071957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 7","termid":"PBO:0071957"}


id: PBO:0028803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028803"}


id: PBO:0044782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4-dienoyl-CoA reductase 2","termid":"PBO:0044782"}


id: PBO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Ylf2 (predicted)","termid":"PBO:0001786"}


id: GO:0097658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear ubiquitin ligase multiprotein complex located in the inner nuclear membrane (INM) that recognizes and ubiquitinates misfolded INM proteins and also some proteins involved in sterol biosynthesis, during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligases Asi1p and Asi3p.","definition_xrefs":["GOC:mcc","PMID:25236469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"nuclear inner membrane","termid":"GO:0005637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Asi complex","termid":"GO:0097658"}


id: PBO:0066725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 22","termid":"PBO:0066725"}


id: PBO:0075081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 131","termid":"PBO:0075081"}


id: PBO:0062573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 1 pseudogene","termid":"PBO:0062573"}


id: PBO:0044692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDRGK domain containing 1","termid":"PBO:0044692"}


id: PBO:0068221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 528","termid":"PBO:0068221"}


id: _global:biotically_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"_global:ecologically_related_to"},{"relation_name":"is_a","term_name":"interacts_with","termid":"_global:interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotically_interacts_with","secondary_identifiers":["RO:0002437"],"termid":"_global:biotically_interacts_with"}


id: PBO:0090434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase Mtq2","termid":"PBO:0090434"}


id: GO:0010290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of chlorophyll catabolites such as non-fluorescent chlorophyll catabolites (NCCs), from one side of a membrane to the other.","definition_xrefs":["PMID:9681016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chlorophyll catabolite transmembrane transporter activity","termid":"GO:0010290"}


id: PBO:0087476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both the ERMES and the SAM complex; component of ERMES complex which acts as a molecular tether between the mitochondria and the ER, necessary for efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex component that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex is often co-localized with peroxisomes and concentrated areas of pyruvate dehydrogenase","termid":"PBO:0087476"}


id: FYPO:0001766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA methylation, the posttranscriptional addition of methyl groups to specific residues in a tRNA molecule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal tRNA methylation","synonyms":[{"name":"abnormal tRNA methylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001766"}


id: PBO:0085814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels","termid":"PBO:0085814"}


id: PBO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2012","termid":"PBO:0052334"}


id: PR:O59773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vid21 gene.","definition_xrefs":["UniProtKB:O59773","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein vid21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.08c","synonyms":[{"name":"Spom972h-vid21","type":"exact"},{"name":"esa1-associated factor vid21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar import and degradation protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59773"}


id: PBO:0082669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the DNA ligase IV complex; this complex mediates nonhomologous end joining in DNA double-strand break repair; sumoylated by Siz1p and Nfi1p SUMO ligases on Lys301; physically interacts with Dnl4p and Nej1p; homologous to mammalian XRCC4 protein","termid":"PBO:0082669"}


id: GO:0045335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phagocytic vesicle","secondary_identifiers":["Wikipedia:Phagosome"],"synonyms":[{"name":"phagosome","type":"exact"}],"termid":"GO:0045335"}


id: PBO:0042182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 2","termid":"PBO:0042182"}


id: PBO:0053464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 426","termid":"PBO:0053464"}


id: PBO:0087334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl10p; co-translationally associates with nascent Rpl10p, preventing aggregation; involved in biogenesis of the ribosomal large subunit; contains multiple WD repeats; interacts genetically and physically with Qsr1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087334"}


id: FYPO:0006445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation of one or more proteins involved in amino acid biosynthesis is decreased.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased translation of amino acid biosynthesis proteins during vegetative growth","synonyms":[{"name":"decreased translation of amino acid biosynthesis genes during vegetative growth","type":"exact"},{"name":"decreased translation of amino acid biosynthesis mRNAs during vegetative growth","type":"exact"},{"name":"decreased translation of amino acid biosynthesis proteins during mitotic cell cycle","type":"related"},{"name":"reduced translation of amino acid biosynthesis proteins during vegetative growth","type":"exact"}],"termid":"FYPO:0006445"}


id: GO:0050045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-D-glucosyl-D-glucose + phosphate = D-glucose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.31","MetaCyc:LAMINARIBIOSE-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"laminaribiose phosphorylase activity","secondary_identifiers":["RHEA:16617"],"synonyms":[{"name":"3-beta-D-glucosyl-D-glucose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050045"}


id: GO:1902570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nucleolus.","definition_xrefs":["GOC:TermGenie","PMID:22809626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to nucleolus","synonyms":[{"name":"protein localisation in nucleolus","type":"exact"},{"name":"protein localisation to nucleolus","type":"exact"},{"name":"protein localization in nucleolus","type":"exact"}],"termid":"GO:1902570"}


id: PBO:0082476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; role in nutrient-stimulated growth via Ras-cAMP signaling; inhibited by regulatory subunit Bcy1p in cAMPs absence; phosphorylates and inhibits Whi3p to promote G1/S phase passage; phosphorylates Nej1p to regulate nonhomologous end joining (NHEJ); impairs mitochondrial import of pre-Tom40p via phosphorylation under non-respiratory conditions; partially redundant with Tpk2p and Tpk3p; human homolog PRKACB regulates NHEJ via NHEJ1 phosphorylation","termid":"PBO:0082476"}


id: GO:0047495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycerophospho group from one membrane-derived oligosaccharide to another.","definition_xrefs":["EC:2.7.8.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSII-RXN"],"synonyms":[{"name":"membrane-derived-oligosaccharide-6-(glycerophospho)-D-glucose:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"periplasmic phosphoglycerotransferase activity","type":"narrow"},{"name":"phosphoglycerol cyclase activity","type":"related"}],"termid":"GO:0047495"}


id: PR:P23880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P23880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.05c","synonyms":[{"name":"Spom972h-sds21","type":"exact"},{"name":"suppressor protein SDS21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23880"}


id: PR:000044611
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septation initiation protein sid4 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Thr-275 and Ser-278 of the amino acid sequence represented by UniProtKB:O60187. Example: UniProtKB:O60187, Thr-275, MOD:00047|Ser-278, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:24055157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septation initiation protein sid4 (Schizosaccharomyces pombe)","termid":"PR:000044588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sid4/Phos(T275,S278)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom-sid4/Phos:1","type":"exact"},{"name":"UniProtKB:O60187, Thr-275, MOD:00047|Ser-278, MOD:00046","type":"narrow"},{"name":"sid4/Phos(T275,S278)","type":"exact"}],"termid":"PR:000044611"}


id: GO:0086056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an AV node cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in AV node cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in AV node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated calcium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086056"}


id: PBO:0033798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033798"}


id: GO:0048815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of hermaphrodite genitalia are generated and organized.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"gene_count":0,"genotype_count":0,"name":"obsolete hermaphrodite genitalia morphogenesis (obsolete GO:0048815)","termid":"GO:0048815"}


id: PBO:0043417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCHC-type zinc finger nucleic acid binding protein","termid":"PBO:0043417"}


id: FYPO:0002168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on ethyl methanesulfonate","synonyms":[{"name":"normal cell population growth in presence of ethyl methanesulfonate","type":"exact"},{"name":"normal cell population growth on EMS","type":"exact"},{"name":"normal cell population growth on ethyl methanesulfonate","type":"exact"},{"name":"normal cellular response to ethyl methanesulfonate","type":"related"},{"name":"normal growth on ethyl methanesulphonate","type":"exact"},{"name":"normal vegetative cell population growth on ethyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002168"}


id: SO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a transfer RNA (SO:0000253).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_primary_transcript","synonyms":[{"name":"tRNA primary transcript","type":"exact"}],"termid":"SO:0000210"}


id: PBO:0053155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase C","termid":"PBO:0053155"}


id: GO:0015051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of X-opioid receptors.","definition_xrefs":["InterPro:IPR001420"],"gene_count":0,"genotype_count":0,"name":"obsolete X-opioid receptor activity (obsolete GO:0015051)","synonyms":[{"name":"X-opioid receptor activity","type":"exact"}],"termid":"GO:0015051"}


id: MOD:01337
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartate 4-methyl ester.","definition_xrefs":["Unimod:528#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid 4-methyl ester","termid":"MOD:01181"},{"relation_name":"is_a","term_name":"deamidated and methyl esterified residue","termid":"MOD:01369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"deamidated 4-methyl esterified asparagine","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01337"}


id: GO:0032394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class Ib protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"MHC class Ib receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032394"}


id: GO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of leaflet formation as a result of the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"},{"relation_name":"is_a","term_name":"regulation of leaflet formation","termid":"GO:0090016"},{"relation_name":"is_a","term_name":"positive regulation of leaf development","termid":"GO:1905623"},{"relation_name":"positively_regulates","term_name":"leaflet formation","termid":"GO:0090014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of leaflet formation by auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of leaflet formation by auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0090015"}


id: PBO:0056245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage interferon regulatory lncRNA","termid":"PBO:0056245"}


id: PBO:0028370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GU_repeat_RNA_binding","termid":"PBO:0028370"}


id: PBO:0073261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 5","termid":"PBO:0073261"}


id: GO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic cell death.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"TRAIL receptor activity","synonyms":[{"name":"tumor necrosis factor-related apoptosis-inducing ligand receptor","type":"exact"}],"termid":"GO:0036463"}


id: PBO:0084755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix iron chaperone; oxidizes and stores iron; interacts with Isu1p to promote Fe-S cluster assembly; mutation results in multiple Fe/S-dependent enzyme deficiencies; human frataxin homolog FXN is mutated in Friedrich's ataxia; human FTL gene can complement yeast yfh1 null mutant","termid":"PBO:0084755"}


id: PBO:0070703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 7","termid":"PBO:0070703"}


id: PBO:0069790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1076, pseudogene","termid":"PBO:0069790"}


id: PBO:0028207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_punctate_nuclear_protein_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028207"}


id: PBO:0078700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 2-1","termid":"PBO:0078700"}


id: PBO:0061258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like A","termid":"PBO:0061258"}


id: PBO:0082456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C6 zinc cluster transcriptional activator; binds to the carbon source-responsive element (CSRE) of gluconeogenic genes; involved in the positive regulation of gluconeogenesis; regulated by Snf1p protein kinase; localized to the nucleus","termid":"PBO:0082456"}


id: SO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion where the deletion brings together transcription factor binding sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_fusion","termid":"SO:0001887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_fusion","synonyms":[{"name":"TFBS fusion ","type":"exact"},{"name":"transcription factor binding site fusion","type":"exact"}],"termid":"SO:0001888"}


id: PBO:0084335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein involved in mitotic spindle positioning; stabilizes microtubules by targeting Bik1p to the plus end; functions as a microtubule polymerase and catastrophe inhibitor in vitro; Kip2p levels are controlled during the cell cycle","termid":"PBO:0084335"}


id: PR:O74474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf21 gene.","definition_xrefs":["UniProtKB:O74474","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.15","synonyms":[{"name":"Spom972h-wtf21","type":"exact"}],"termid":"PR:O74474"}


id: PBO:0068966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 210, pseudogene","termid":"PBO:0068966"}


id: PBO:0038644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 12","termid":"PBO:0038644"}


id: PBO:0041034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2D, pseudogene","termid":"PBO:0041034"}


id: GO:0031983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane or protein that forms a vesicle.","definition_xrefs":["GOC:vesicles","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"vesicle","termid":"GO:0031982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vesicle lumen","secondary_identifiers":["NIF_Subcellular:sao797538226"],"termid":"GO:0031983"}


id: GO:0006498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a lipid group to the amino terminus of a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"N-terminal protein lipidation","termid":"GO:0006498"}


id: GO:0071736
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgG isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgG immunoglobulin complex","termid":"GO:0071735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgG immunoglobulin complex, circulating","synonyms":[{"name":"IgG antibody","type":"narrow"},{"name":"IgG1 antibody","type":"narrow"},{"name":"IgG2 antibody","type":"narrow"},{"name":"IgG2a antibody","type":"narrow"},{"name":"IgG2b antibody","type":"narrow"},{"name":"IgG2c antibody","type":"narrow"},{"name":"IgG3 antibody","type":"narrow"},{"name":"IgG4 antibody","type":"narrow"}],"termid":"GO:0071736"}


id: MOD:01622
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to one of several monohydroxylated tryptophan residues, including 3-hydroxy-L-tryptophan and 7'-hydroxy-L-tryptophan.","definition_xrefs":["OMSSA:90","Unimod:35#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated tryptophan","synonyms":[{"name":"Oxidation","type":"related"},{"name":"oxyw","type":"exact"}],"termid":"MOD:01622"}


id: FYPO:0001165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell that is exposed to anaerobic conditions fails to grow upon being returned to aerobic conditions, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable cell following anaerobic growth","synonyms":[{"name":"inviable following anaerobic vegetative growth","type":"exact"},{"name":"lethal; cell following anaerobic growth","type":"exact"}],"termid":"FYPO:0001165"}


id: PBO:0074326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2","termid":"PBO:0074326"}


id: PATO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000376 flavor value (obsolete PATO:0000376)","termid":"PATO:0000376"}


id: PBO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat","termid":"PBO:0000328"}


id: FYPO:0000849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cytoplasm of a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cytoplasmic protein level during vegetative growth","synonyms":[{"name":"cytoplasmic accumulation of protein","type":"exact"},{"name":"cytoplasmic protein accumulation during vegetative growth","type":"exact"},{"name":"increased cytoplasmic protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0000849"}


id: PBO:0042404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14C","termid":"PBO:0042404"}


id: SO:0005843
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ncRNA that is part of a ribonucleoprotein that cleaves the primary pre-rRNA transcript in the process of producing mature rRNA molecules.","definition_xrefs":["GOC:kgc"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_cleavage_snoRNA_primary_transcript","termid":"SO:0000582"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_cleavage_RNA","synonyms":[{"name":"rRNA cleavage RNA","type":"exact"}],"termid":"SO:0005843"}


id: PR:Q9P7J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ada2 gene.","definition_xrefs":["UniProtKB:Q9P7J7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adapter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.08c","synonyms":[{"name":"Spom972h-ada2","type":"exact"}],"termid":"PR:Q9P7J7"}


id: PBO:0065881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB31, member RAS oncogene family","termid":"PBO:0065881"}


id: PBO:0027200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nuclear_envelope_protrusion_present_during_interphase","termid":"PBO:0027200"}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: PR:Q9P6R2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6R2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13E7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.08c","synonyms":[{"name":"Spom972h-leo1","type":"exact"}],"termid":"PR:Q9P6R2"}


id: PBO:0054302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1694","termid":"PBO:0054302"}


id: PBO:0077531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 244","termid":"PBO:0077531"}


id: PBO:0081331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 132","termid":"PBO:0081331"}


id: PBO:0067025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 38, pseudogene","termid":"PBO:0067025"}


id: GO:0036409
data:
  {"annotated_genes":["SJAG_02629","SJAG_01385","SJAG_04815","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101474,86953,100596,95835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"}]},"cv_name":"cellular_component","definition":"A protein complex that can catalyze the acetylation of lysine at position 14 in histone H3.","definition_xrefs":["GOC:vw","PMID:21289066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01385":null,"SJAG_02165":null,"SJAG_02629":null,"SJAG_04815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"histone H3-K14 acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H3-K14 histone acetyltransferase complex","type":"exact"},{"name":"histone H3 Lys 14 (H3K14) acetyltransferase complex","type":"exact"},{"name":"histone H3K14 acetyltransferase complex","type":"exact"},{"name":"histone acetyltransferase complex (H3-K14 specific)","type":"exact"}],"termid":"GO:0036409","terms_by_termid":{"GO:0036410":null}}


id: PBO:0062118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)","termid":"PBO:0062118"}


id: FYPO:0005497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from RNA polymerase II promoter","termid":"FYPO:0003796"},{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abolished transcription from CRE promoter","synonyms":[{"name":"abolished transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished","type":"related"},{"name":"transcription from CRE promoter abolished","type":"exact"}],"termid":"FYPO:0005497"}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: PBO:0052807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT73 antisense RNA 1","termid":"PBO:0052807"}


id: GO:0070074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle that forms part of the apical complex; a small, threadlike structure located is close proximity to the subpellicular microtubules. Its contents include a rhomboid protease (PfROM1 in Plasmodium falciparum) that moves from the lateral asymmetric localization to the merozoite apical pole and the posterior pole upon release of merozoites from schizonts.","definition_xrefs":["GOC:BHF","PMID:18048320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mononeme","termid":"GO:0070074"}


id: GO:0003844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain.","definition_xrefs":["EC:2.4.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,4-alpha-glucan branching enzyme activity","secondary_identifiers":["Reactome:R-HSA-3322057","Reactome:R-HSA-3322005","Reactome:R-HSA-3878762","MetaCyc:GLYCOGEN-BRANCH-RXN","Reactome:R-HSA-3322016"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-alpha-D-(1,4-alpha-D-glucano)-transferase activity","type":"exact"},{"name":"1,4-glucan-6-(1,4-glucano)-transferase activity","type":"exact"},{"name":"Q-enzyme","type":"related"},{"name":"alpha-1,4-glucan:alpha-1,4-glucan-6-glycosyltransferase activity","type":"related"},{"name":"alpha-glucan-branching glycosyltransferase activity","type":"related"},{"name":"amylo-(1,4 to 1,6)transglucosidase activity","type":"related"},{"name":"amylo-(1,4->1,6)-transglycosylase activity","type":"related"},{"name":"amylose isomerase activity","type":"related"},{"name":"branching enzyme activity","type":"related"},{"name":"branching glycosyltransferase activity","type":"related"},{"name":"enzymatic branching factor","type":"related"},{"name":"enzyme Q","type":"related"},{"name":"glucosan transglycosylase activity","type":"related"},{"name":"glycogen branching enzyme activity","type":"related"},{"name":"plant branching enzyme","type":"related"},{"name":"starch branching enzyme","type":"related"}],"termid":"GO:0003844"}


id: GO:0160139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2605) in 23S rRNA = pseudouridine(2605) in 23S rRNA.","definition_xrefs":["EC:5.4.99.22","RHEA:42520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2605) synthase activity","termid":"GO:0160139"}


id: GO:0071925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of thymic stromal lymphopoietin (TSLP) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:17129180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"thymic stromal lymphopoietin production","synonyms":[{"name":"TSLP production","type":"exact"}],"termid":"GO:0071925"}


id: GO:0098831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"presynaptic active zone cytoplasmic component","synonyms":[{"name":"cortex of presynaptic active zone","type":"exact"},{"name":"presynaptic zone cortex","type":"exact"}],"termid":"GO:0098831"}


id: PBO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 15 pseudogene","termid":"PBO:0062233"}


id: GO:1903173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty alcohol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:24036493","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty alcohol metabolic process","synonyms":[{"name":"fatty alcohol metabolism","type":"exact"}],"termid":"GO:1903173"}


id: GO:0007412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an axon recognizes and binds to a set of cells with which it may form stable connections.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon target recognition","termid":"GO:0007412"}


id: GO:1900676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of F-9775B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of F-9775B biosynthetic process","termid":"GO:1900675"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"negatively_regulates","term_name":"F-9775B biosynthetic process","termid":"GO:1900614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of F-9775B biosynthetic process","synonyms":[{"name":"down regulation of F-9775B anabolism","type":"exact"},{"name":"down regulation of F-9775B biosynthesis","type":"exact"},{"name":"down regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down regulation of F-9775B formation","type":"exact"},{"name":"down regulation of F-9775B synthesis","type":"exact"},{"name":"down-regulation of F-9775B anabolism","type":"exact"},{"name":"down-regulation of F-9775B biosynthesis","type":"exact"},{"name":"down-regulation of F-9775B biosynthetic process","type":"exact"},{"name":"down-regulation of F-9775B formation","type":"exact"},{"name":"down-regulation of F-9775B synthesis","type":"exact"},{"name":"downregulation of F-9775B anabolism","type":"exact"},{"name":"downregulation of F-9775B biosynthesis","type":"exact"},{"name":"downregulation of F-9775B biosynthetic process","type":"exact"},{"name":"downregulation of F-9775B formation","type":"exact"},{"name":"downregulation of F-9775B synthesis","type":"exact"},{"name":"inhibition of F-9775B anabolism","type":"exact"},{"name":"inhibition of F-9775B biosynthesis","type":"exact"},{"name":"inhibition of F-9775B biosynthetic process","type":"narrow"},{"name":"inhibition of F-9775B formation","type":"exact"},{"name":"inhibition of F-9775B synthesis","type":"exact"},{"name":"negative regulation of F-9775B anabolism","type":"exact"},{"name":"negative regulation of F-9775B biosynthesis","type":"exact"},{"name":"negative regulation of F-9775B formation","type":"exact"},{"name":"negative regulation of F-9775B synthesis","type":"exact"}],"termid":"GO:1900676"}


id: PBO:0111767
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PY motif","termid":"PBO:0111767"}


id: _global:involved_in_negative_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' negatively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","secondary_identifiers":["RO:0002430"],"termid":"_global:involved_in_negative_regulation_of"}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: PBO:0066892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 192","termid":"PBO:0066892"}


id: PBO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_output","termid":"PBO:0006176"}


id: PBO:0057922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3648-1","termid":"PBO:0057922"}


id: PR:O14012
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.09 gene.","definition_xrefs":["UniProtKB:O14012","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.09","synonyms":[{"name":"Spom972h-SPAC29A4.09","type":"exact"}],"termid":"PR:O14012"}


id: PBO:0110346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDCA7 pseudogene 2","termid":"PBO:0110346"}


id: PR:O13803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 82 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00825","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.06c","secondary_identifiers":["UniProtKB:O13803"],"synonyms":[{"name":"Spom972h-CCDC82","type":"exact"}],"termid":"PR:O13803"}


id: GO:0019432
data:
  {"annotated_genes":["SJAG_04041","SJAG_03609","SJAG_02763","SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86244,87644,108244,110362],"is_not":false,"summary":null,"term":"GO:0019432"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRIGLSYN-PWY"],"synonyms":[{"name":"triacylglycerol biosynthesis","type":"exact"},{"name":"triacylglycerol biosynthetic process","type":"exact"},{"name":"triglyceride anabolism","type":"exact"},{"name":"triglyceride biosynthesis","type":"exact"},{"name":"triglyceride formation","type":"exact"},{"name":"triglyceride synthesis","type":"exact"}],"termid":"GO:0019432","terms_by_termid":{"GO:0019432":null}}


id: FYPO:0003074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to pericentric heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromere during vegetative growth","termid":"FYPO:0000634"},{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromeric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localisation to pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear centromeric heterochromatin","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic cell cycle during mitotic cell cycle during mitotic cell cycle","type":"related"},{"name":"protein localization to centromeric heterochromatin abolished during vegetative growth","type":"exact"},{"name":"protein localization to pericentric heterochromatin abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003074"}


id: PBO:0052237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 5","termid":"PBO:0052237"}


id: PBO:0027534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027534"}


id: MOD:01737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01737"}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: GO:0060660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the epidermis of the nipple sheath is uplifted to form an umbrella-like projection.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermis morphogenesis","termid":"GO:0048730"},{"relation_name":"part_of","term_name":"nipple morphogenesis","termid":"GO:0060658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermis morphogenesis involved in nipple formation","termid":"GO:0060660"}


id: PBO:0057278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 500a","termid":"PBO:0057278"}


id: GO:1905013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 'de novo' NAD biosynthetic process from tryptophan.","definition_xrefs":["PMID:12140278","GOC:PARL","GOC:TermGenie","PMID:19843166","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of NAD metabolic process","termid":"GO:1902689"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from tryptophan","termid":"GO:1905012"},{"relation_name":"negatively_regulates","term_name":"'de novo' NAD biosynthetic process from tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of 'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"down regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"down-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"downregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"downregulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"inhibition of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"inhibition of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"negative regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905013"}


id: GO:0032380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular sterol transport","termid":"GO:0032380"}


id: PR:000037078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that includes at least one sumoylated lysine.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sumoylated protein","synonyms":[{"name":"Prot/SumoLys+","type":"exact"}],"termid":"PR:000037078"}


id: PBO:0071221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 62","termid":"PBO:0071221"}


id: GO:0005952
data:
  {"annotated_genes":["SJAG_04312","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96599,98007],"is_not":false,"summary":null,"term":"GO:0005952"}]},"cv_name":"cellular_component","definition":"An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer.","definition_xrefs":["PMID:18178622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cAMP-dependent protein kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3',5' cAMP-dependent protein kinase complex","type":"exact"},{"name":"3',5'-cAMP-dependent protein kinase complex","type":"exact"},{"name":"PKA","type":"related"},{"name":"adenosine 3',5'-cyclophosphate-dependent protein kinase complex","type":"exact"},{"name":"cyclic AMP-dependent protein kinase complex","type":"exact"}],"termid":"GO:0005952","terms_by_termid":{"GO:0005952":null}}


id: PBO:0004709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Tea2","termid":"PBO:0004709"}


id: PBO:0083704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER integral membrane protein, ERMES complex subunit; ERMES links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0083704"}


id: GO:1904118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25677106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"}


id: GO:0051281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"activation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"positive regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"positive regulation of calcium mobilization","type":"broad"},{"name":"positive regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"},{"name":"stimulation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"up regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"up-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"upregulation of release of sequestered calcium ion into cytosol","type":"exact"}],"termid":"GO:0051281"}


id: GO:0007185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses protein tyrosine phosphatase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor protein tyrosine phosphatase signaling pathway","synonyms":[{"name":"transmembrane receptor protein tyrosine phosphatase signaling pathway","type":"exact"},{"name":"transmembrane receptor protein tyrosine phosphatase signalling pathway","type":"exact"}],"termid":"GO:0007185"}


id: PBO:0070348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 21","termid":"PBO:0070348"}


id: PBO:0030287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_sulfide_level","termid":"PBO:0030287"}


id: GO:0005966
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the hydrolysis of bonds in a cyclic nucleotide.","definition_xrefs":["EC:3.1.4.-"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic-nucleotide phosphodiesterase complex (obsolete GO:0005966)","synonyms":[{"name":"photoreceptor cyclic-nucleotide phosphodiesterase complex","type":"narrow"}],"termid":"GO:0005966"}


id: PBO:0051788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCF5 antisense RNA 1","termid":"PBO:0051788"}


id: FYPO:0008049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: PBO:0077350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 89","termid":"PBO:0077350"}


id: PBO:0072018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 5","termid":"PBO:0072018"}


id: GO:0039523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the transcription of genes into mRNA in its host by directly inhibiting host RNA polymerase II activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:36144426","PMID:25233083","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host transcription","termid":"GO:0039653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA transcription via inhibition of RNA polymerase II activity","synonyms":[{"name":"inhibition of host RNA polymerase II activity by virus","type":"narrow"},{"name":"inhibition of host RNA polymerase II by virus","type":"exact"},{"name":"negative regulation by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity","type":"narrow"}],"termid":"GO:0039523"}


id: PBO:0058948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67","termid":"PBO:0058948"}


id: GO:0031325
data:
  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