# terms

id: PATO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular","termid":"PATO:0002125"}


id: FYPO:0008161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:18344406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone acetylation during vegetative growth","termid":"FYPO:0003221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0008161"}


id: PBO:0073324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated endoplasmic reticulum protein family member 2","termid":"PBO:0073324"}


id: PBO:0064817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 10","termid":"PBO:0064817"}


id: GO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP involved in maintaining an unfolded polypeptide structure before folding or to entry into mitochondria and chloroplasts.","definition_xrefs":["ISBN:0198547684","EC:3.6.4.9"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperonin ATPase activity (obsolete GO:0003763)","synonyms":[{"name":"chaperonin","type":"exact"},{"name":"chaperonin ATPase activity","type":"exact"}],"termid":"GO:0003763"}


id: GO:0015466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An agent that can lyse the cell in which it is synthesized.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete autolysin activity (obsolete GO:0015466)","synonyms":[{"name":"autolysin activity","type":"exact"}],"termid":"GO:0015466"}


id: PBO:0026911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0026911"}


id: GO:2000812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0007010","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"regulation of barbed-end actin filament capping","synonyms":[{"name":"regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"regulation of barbed-end actin capping activity","type":"exact"},{"name":"regulation of plus-end F-actin capping activity","type":"exact"},{"name":"regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000812"}


id: GO:0051645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Golgi localization","synonyms":[{"name":"Golgi apparatus localization","type":"exact"},{"name":"Golgi body localization","type":"exact"},{"name":"Golgi localisation","type":"exact"},{"name":"establishment and maintenance of Golgi localization","type":"exact"}],"termid":"GO:0051645"}


id: FYPO:0006325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, may contain a septum, and contains multiple nuclei (usually four or more) per compartment.","definition_xrefs":["PMID:18272786","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"elongated multinucleate vegetative cell with multinucleate compartment","synonyms":[{"name":"elongated multinucleate vegetative cell with multinucleate compartment during mitotic cell cycle","type":"related"},{"name":"elongated multinucleate vegetative cell with multinucleate compartment during vegetative growth","type":"exact"},{"name":"elongated multinucleate vegetative cell with tetranucleate compartment","type":"narrow"}],"termid":"FYPO:0006325"}


id: PBO:0050615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 7 pseudogene 1","termid":"PBO:0050615"}


id: PR:P46960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A geranylgeranyl transferase type-2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00626","PANTHER:PTHR11774:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl transferase type-2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.02","secondary_identifiers":["UniProtKB:P46960"],"synonyms":[{"name":"GGTase-II-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RABGGTB","type":"exact"},{"name":"geranylgeranyl transferase type II subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II protein geranyl-geranyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46960"}


id: PBO:0041780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle associated protein 1","termid":"PBO:0041780"}


id: PBO:0090187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Mis19 ortholog, syntenic position","termid":"PBO:0090187"}


id: GO:0016497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with substance K, the peptide His-Lys-Thr-Asp-Ser-Phe-Val-Gly-Leu-Met, to initiate a change in cell activity.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"substance K receptor activity","synonyms":[{"name":"neurokinin A receptor activity","type":"exact"},{"name":"neuromedin L receptor activity","type":"exact"}],"termid":"GO:0016497"}


id: PBO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 1","termid":"PBO:0050862"}


id: PBO:0051236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-43-1 (pseudogene)","termid":"PBO:0051236"}


id: PBO:0080415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS50 subunit of EARP/GARPII complex","termid":"PBO:0080415"}


id: PBO:0112470
data:
  {"annotated_genes":["SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"pombase_family_or_domain":[{"annotations":[56044],"is_not":false,"summary":null,"term":"PBO:0112470"}]},"cv_name":"pombase_family_or_domain","gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":0,"is_obsolete":false,"name":"warning frameshifted","termid":"PBO:0112470","terms_by_termid":{"PBO:0112470":null}}


id: GO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"},{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding","synonyms":[{"name":"5-hydroxy-6E,8Z,11Z,14Z-eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050647"}


id: PBO:0072626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 1","termid":"PBO:0072626"}


id: PBO:0013122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS calcium ion channel protein Msy1","termid":"PBO:0013122"}


id: GO:0072313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular epithelial cell over time, from its formation to the mature structure. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"}


id: PBO:0078908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 17-1","termid":"PBO:0078908"}


id: GO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric prebend segment over time, from its formation to the mature structure. The metanephric prebend segment is a part of the metanephric descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prebend segment development","termid":"GO:0072066"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric prebend segment development","termid":"GO:0072228"}


id: MOD:00348
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["PubMed:12203680","RESID:AA0343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: GO:0006240
data:
  {"annotated_genes":["SJAG_02874","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88621,91670,103437],"is_not":false,"summary":null,"term":"GO:0006240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009197"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dCDP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dCDP anabolism","type":"exact"},{"name":"dCDP biosynthesis","type":"exact"},{"name":"dCDP formation","type":"exact"},{"name":"dCDP synthesis","type":"exact"}],"termid":"GO:0006240","terms_by_termid":{"GO:0006240":null}}


id: PBO:0004575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Hfi1","termid":"PBO:0004575"}


id: PR:Q9USL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18B5.09c gene.","definition_xrefs":["UniProtKB:Q9USL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.09c","synonyms":[{"name":"Spom972h-SPCC18B5.09c","type":"exact"}],"termid":"PR:Q9USL2"}


id: PBO:0027365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_mononucleate_vegetative_cell","termid":"PBO:0027365"}


id: PR:Q9C1W8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endopolyphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.07c","synonyms":[{"name":"Spom972h-SPBC713.07c","type":"exact"}],"termid":"PR:Q9C1W8"}


id: FYPO:0005886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more heat shock elements (HSEs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"increased transcription from HSE promoter","synonyms":[{"name":"expression of Hsf1 target genes increased","type":"related"},{"name":"increased transcription from HSE promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from HSE promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005886"}


id: PBO:0005784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex alpha subunit Tfg1 (predicted)","termid":"PBO:0005784"}


id: PBO:0054974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2388","termid":"PBO:0054974"}


id: GO:0070146
data:
  {"annotated_genes":["SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114178],"is_not":false,"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA in a mitochondrion, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartyl-tRNA aminoacylation","termid":"GO:0006422"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"mitochondrial aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070146","terms_by_termid":{"GO:0070146":null}}


id: GO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription by RNA polymerase I.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription termination factor activity (obsolete GO:0003716)","synonyms":[{"name":"Pol I transcription termination factor activity","type":"exact"},{"name":"RNA polymerase I transcription termination factor activity","type":"exact"}],"termid":"GO:0003716"}


id: PR:G2TRQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.15","synonyms":[{"name":"Spom972h-tam13","type":"exact"},{"name":"transcripts altered in meiosis protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ0"}


id: GO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"positively_regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic muscle development","termid":"GO:0062224"}


id: PATO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration which relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diluted","termid":"PATO:0001161"}


id: GO:0061913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["PMID:19264869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"positively_regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0061913"}


id: PBO:0058245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4533","termid":"PBO:0058245"}


id: GO:0035647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 3-oxo-delta-4,5-steroid + NADPH + H+ = a 5-beta-3-oxo-steroid + NADP+.","definition_xrefs":["MetaCyc:RXN-9726","PMID:19166903","GOC:kad"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-delta(4,5)-steroid 5-beta-reductase activity (obsolete GO:0035647)","synonyms":[{"name":"3-oxo-delta4,5-steroid 5beta-reductase","type":"exact"}],"termid":"GO:0035647"}


id: GO:1901293
data:
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id: PBO:0082438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation; CLB4 has a paralog, CLB3, that arose from the whole genome duplication","termid":"PBO:0082438"}


id: PBHQ:002
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOT","termid":"PBHQ:002"}


id: PBO:0084696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial external NADH dehydrogenase; catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p are involved in providing the cytosolic NADH to the mitochondrial respiratory chain; NDE2 has a paralog, NDE1, that arose from the whole genome duplication","termid":"PBO:0084696"}


id: PR:O13946
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum vesicle protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.03c","secondary_identifiers":["UniProtKB:O13946"],"synonyms":[{"name":"SPAC23H4.03c","type":"related"},{"name":"Spom972h-TMED10","type":"exact"}],"termid":"PR:O13946"}


id: FYPO:0002999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to medial cortex during vegetative growth","termid":"FYPO:0002558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to medial cortical node","synonyms":[{"name":"normal protein localisation to medial cortical node","type":"exact"},{"name":"normal protein localization to cortical medial dot","type":"exact"},{"name":"normal protein localization to cytokinetic nodes","type":"related"},{"name":"normal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortical nodes","type":"exact"},{"name":"normal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0002999"}


id: GO:0075168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein kinase-mediated signal transduction in response to host (obsolete GO:0075168)","synonyms":[{"name":"regulation of symbiont protein kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075168"}


id: GO:0038115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL19 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:15059845","GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 7 signaling pathway","type":"related"},{"name":"CCL19-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 19 signalling pathway","type":"exact"}],"termid":"GO:0038115"}


id: PATO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality","secondary_identifiers":["PATO:0002079","Wikipedia:Physical_property"],"synonyms":[{"name":"relational physical quality","type":"exact"}],"termid":"PATO:0001018"}


id: PBO:0055535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2971","termid":"PBO:0055535"}


id: PBO:0081925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 965, pseudogene","termid":"PBO:0081925"}


id: PBO:0013791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein Hal3","termid":"PBO:0013791"}


id: PBO:0052498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 10","termid":"PBO:0052498"}


id: FYPO:0006581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fenpropimorph. Cells stop growing (and may die) at a concentration of fenpropimorph that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to fenpropimorph","synonyms":[{"name":"hypersensitive to fenpropimorph","type":"exact"},{"name":"sensitive to fenpropimorph during mitotic cell cycle","type":"related"},{"name":"sensitive to fenpropimorph during vegetative growth","type":"exact"}],"termid":"FYPO:0006581"}


id: GO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a glucosylglycerol from one side of a membrane to the other. A glucosylglycerol is an alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transporter activity","termid":"GO:0051474"}


id: PBO:0062880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 pseudogene 1","termid":"PBO:0062880"}


id: PBO:0062798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 3","termid":"PBO:0062798"}


id: GO:1990882
data:
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id: FYPO:0002054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to hydroxyurea. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to hydroxyurea (obsolete FYPO:0002054)","synonyms":[{"name":"cut during cellular response to HU","type":"exact"},{"name":"cut during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002054"}


id: GO:0019814
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains, held together by disulfide bonds and sometimes complexed with additional proteins. An immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","GOC:jl","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"immunoglobulin complex","synonyms":[{"name":"antibody","type":"narrow"}],"termid":"GO:0019814"}


id: PBO:0111845
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCK subfamily","termid":"PBO:0111845"}


id: GO:0034567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chromate = chromium (III).","definition_xrefs":["UM-BBD_reactionID:r0884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"chromate reductase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034567"}


id: PBO:0078332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-4","termid":"PBO:0078332"}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: GO:0097093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["PMID:19729090","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"polyacyltrehalose metabolic process","termid":"GO:0097092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyacyltrehalose biosynthetic process","synonyms":[{"name":"polyacyltrehalose anabolism","type":"exact"},{"name":"polyacyltrehalose biosynthesis","type":"exact"},{"name":"polyacyltrehalose formation","type":"exact"},{"name":"polyacyltrehalose synthesis","type":"exact"}],"termid":"GO:0097093"}


id: PBO:0039299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG13 UDP-N-acetylglucosaminyltransferase subunit","termid":"PBO:0039299"}


id: PBO:0085134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for 60S ribosomal subunit biogenesis","termid":"PBO:0085134"}


id: PBO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-GATA type","termid":"PBO:0000371"}


id: PBO:0038489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 11","termid":"PBO:0038489"}


id: PBO:0084169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved SUMO E3 ligase subunit of SMC5-SMC6 complex; required for anchoring dsDNA breaks to the nuclear periphery; SMC5-SMC6 plays a key role in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; required for efficient sister chromatid cohesion; mutants are sensitive to MMS, show increased spontaneous mutation and mitotic recombination; SUMOylates and inhibits Snf1p function; supports nucleolar function","termid":"PBO:0084169"}


id: GO:0033086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrathymic T cell differentiation","termid":"GO:0033082"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extrathymic T cell differentiation","synonyms":[{"name":"negative regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033086"}


id: PBO:0005618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf16","termid":"PBO:0005618"}


id: FYPO:0002809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased 6,7-dimethyl-8-ribityllumazine synthase activity","synonyms":[{"name":"reduced 6,7-dimethyl-8-ribityllumazine synthase activity","type":"exact"}],"termid":"FYPO:0002809"}


id: GO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"hemoglobin metabolic process","termid":"GO:0020027"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin biosynthetic process","synonyms":[{"name":"hemoglobin formation","type":"exact"},{"name":"hemoglobin synthesis","type":"exact"},{"name":"haemoglobin biosynthesis","type":"exact"},{"name":"haemoglobin biosynthetic process","type":"exact"},{"name":"hemoglobin anabolism","type":"exact"},{"name":"hemoglobin biosynthesis","type":"exact"}],"termid":"GO:0042541"}


id: PBO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase family member 2","termid":"PBO:0061059"}


id: GO:0047603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetyl-CoA + H2O = acetoacetate + CoA + H+.","definition_xrefs":["EC:3.1.2.11","RHEA:15673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetoacetyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:ACETOACETYL-COA-HYDROLASE-RXN","KEGG_REACTION:R01358"],"synonyms":[{"name":"acetoacetyl CoA deacylase activity","type":"related"},{"name":"acetoacetyl coenzyme A deacylase activity","type":"related"},{"name":"acetoacetyl coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047603"}


id: PBO:0049419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase 1","termid":"PBO:0049419"}


id: PBO:0088290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26","termid":"PBO:0088290"}


id: GO:0010689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a chemical stimulus.","definition_xrefs":["GOC:dph","GOC:txnOH","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus","termid":"GO:0010689"}


id: GO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + acetyl-CoA + H2O = L-2-acetamido-6-oxopimelate + CoA.","definition_xrefs":["RHEA:13085","EC:2.3.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"tetrahydrodipicolinate N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04364","MetaCyc:2.3.1.89-RXN"],"synonyms":[{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydrodipicolinate-2,6-dicarboxylate N2-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 2-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate acetylase activity","type":"related"},{"name":"tetrahydrodipicolinate:acetyl-CoA acetyltransferase activity","type":"related"}],"termid":"GO:0047200"}


id: GO:0032951
data:
  {"annotated_genes":["SJAG_03705","SJAG_04666","SJAG_04668","SJAG_04771","SJAG_00610","SJAG_04462","SJAG_01787","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84130],"is_not":false,"summary":null,"term":"GO:0032951"},{"annotations":[88601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[83750,88604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[88590,114035,88606,99019,86971,101510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways relusting in the formation of beta-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"regulates","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of beta-glucan anabolism","type":"exact"},{"name":"regulation of beta-glucan biosynthesis","type":"exact"},{"name":"regulation of beta-glucan formation","type":"exact"},{"name":"regulation of beta-glucan synthesis","type":"exact"}],"termid":"GO:0032951","terms_by_termid":{"GO:0032951":null,"GO:0060635":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0019707
data:
  {"annotated_genes":["SJAG_01299","SJAG_00895","SJAG_04451","SJAG_01112"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106337,104462,92080,99287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a sulfur atom on the cysteine of a protein molecule.","definition_xrefs":["GOC:ai","RHEA:63372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-cysteine S-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019707","terms_by_termid":{"GO:0019706":null}}


id: PBO:0044166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen triple helix repeat containing 1","termid":"PBO:0044166"}


id: GO:0043494
data:
  {"annotated_genes":["SJAG_02119","SJAG_03680","SJAG_01540","SJAG_04574","SJAG_00756","SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90523,92902,106665,110166,113821,114926],"is_not":false,"summary":null,"term":"GO:0043494"}]},"cv_name":"cellular_component","definition":"An cullin-dependent E3 ubiquitin ligase/histone H3-K9 methyltransferase complex essential for heterochromatin assembly by RNAi.","definition_xrefs":["GOC:vw","PMID:16127433","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"},{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_03680":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"CLRC complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CLRC ubiquitin ligase complex","type":"exact"},{"name":"Clr4-Rik1-Cul4 complex","type":"exact"},{"name":"Rik1 E3 ubiquitin ligase complex","type":"exact"},{"name":"Rik1-E3 ubiquitin ligase complex","type":"exact"}],"termid":"GO:0043494","terms_by_termid":{"GO:0043494":null}}


id: PBO:0057588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892a","termid":"PBO:0057588"}


id: GO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein deubiquitination","secondary_identifiers":["GO:0006514"],"synonyms":[{"name":"deubiquitination","type":"exact"},{"name":"protein deubiquitinylation","type":"exact"},{"name":"protein deubiquitylation","type":"exact"}],"termid":"GO:0016579"}


id: PBO:0053386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 313","termid":"PBO:0053386"}


id: GO:1902747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mr","PMID:17592637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lens fiber cell differentiation","termid":"GO:1902746"},{"relation_name":"negatively_regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lens fiber cell differentiation","synonyms":[{"name":"down regulation of lens fiber cell differentiation","type":"exact"},{"name":"down regulation of lens fibre cell differentiation","type":"exact"},{"name":"down-regulation of lens fiber cell differentiation","type":"exact"},{"name":"down-regulation of lens fibre cell differentiation","type":"exact"},{"name":"downregulation of lens fiber cell differentiation","type":"exact"},{"name":"downregulation of lens fibre cell differentiation","type":"exact"},{"name":"inhibition of lens fiber cell differentiation","type":"narrow"},{"name":"inhibition of lens fibre cell differentiation","type":"narrow"},{"name":"negative regulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902747"}


id: PR:O59801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski2 gene.","definition_xrefs":["UniProtKB:O59801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C550.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.03c","synonyms":[{"name":"Spom972h-ski2","type":"exact"}],"termid":"PR:O59801"}


id: PATO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's exhbiting the morphological characteristics of a gland.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glandular","termid":"PATO:0002117"}


id: PBO:0051815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 1","termid":"PBO:0051815"}


id: FYPO:0006674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished during conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nucleus during mating","synonyms":[{"name":"abolished protein localisation to nucleus during mating","type":"exact"},{"name":"abolished protein localization to nucleus during conjugation","type":"exact"},{"name":"nuclear exclusion during mating","type":"related"},{"name":"nuclear protein exclusion during mating","type":"related"},{"name":"protein localization to nucleus abolished during mating","type":"exact"}],"termid":"FYPO:0006674"}


id: PBO:0070284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 25","termid":"PBO:0070284"}


id: PBO:0067977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 279","termid":"PBO:0067977"}


id: PBO:0070576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 42","termid":"PBO:0070576"}


id: GO:0001172
data:
  {"annotated_genes":["SJAG_02070","SJAG_01436","SJAG_02101","SJAG_03356","SJAG_04030","SJAG_01313","SJAG_04894","SJAG_00119","SJAG_00458"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57862,58174,59162,60050,61805,62757,63121,63433,67034],"is_not":false,"summary":null,"term":"GO:0001172"}]},"cv_name":"biological_process","definition":"The synthesis of an RNA transcript from an RNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_03356":null,"SJAG_04030":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA-templated transcription","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"transcription, RNA-dependent","type":"exact"},{"name":"transcription, RNA-templated","type":"exact"}],"termid":"GO:0001172","terms_by_termid":{"GO:0001172":null}}


id: GO:0042579
data:
  {"annotated_genes":["SJAG_02247","SJAG_03440","SJAG_04823","SJAG_03781","SJAG_01474","SJAG_02384","SJAG_02630","SJAG_03464","SJAG_03166","SJAG_00974","SJAG_00702","SJAG_03091","SJAG_04467","SJAG_03671","SJAG_00891","SJAG_02997","SJAG_03324","SJAG_02619","SJAG_00947","SJAG_03715","SJAG_02496","SJAG_01685","SJAG_03493","SJAG_00114","SJAG_04299","SJAG_02848","SJAG_01854","SJAG_00326","SJAG_02693","SJAG_01165","SJAG_04315","SJAG_04763","SJAG_00706","SJAG_04146"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111914,86635,108031,110907,114404,101470,108014],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005782"},{"annotations":[108032,97470,111064,101405,91608,84440,86627,62849,98674,102861,99266,111915,107417,113397,86432,113447,93136,107568,114290],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005778"},{"annotations":[101277,108033,99267,96001,96114,110120,110241,93760,92769,112887,105810,98933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005777"}]},"cv_name":"cellular_component","definition":"Cytoplasmic organelles, spherical or oval in shape, that are bounded by a single membrane and contain oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_00974":null,"SJAG_01165":null,"SJAG_01474":null,"SJAG_01685":null,"SJAG_01854":null,"SJAG_02247":null,"SJAG_02384":null,"SJAG_02496":null,"SJAG_02619":null,"SJAG_02630":null,"SJAG_02693":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03091":null,"SJAG_03166":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03671":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04299":null,"SJAG_04315":null,"SJAG_04467":null,"SJAG_04763":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"microbody","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microbody"],"termid":"GO:0042579","terms_by_termid":{"GO:0005777":null,"GO:0005778":null,"GO:0005782":null}}


id: PBO:0056957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19b-2","termid":"PBO:0056957"}


id: PR:O94263
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03798","PANTHER:PTHR12708:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.14c","secondary_identifiers":["UniProtKB:O94263"],"synonyms":[{"name":"DNA polymerase II subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE2","type":"exact"}],"termid":"PR:O94263"}


id: PBO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_G0_to_G1_transition","termid":"PBO:0031773"}


id: GO:0009888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue development","secondary_identifiers":["Wikipedia:Histogenesis"],"synonyms":[{"name":"histogenesis","type":"exact"},{"name":"histogenesis and organogenesis","type":"broad"}],"termid":"GO:0009888"}


id: PBO:0088762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein NIFK","termid":"PBO:0088762"}


id: PBO:0029580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_at_low_temperature","termid":"PBO:0029580"}


id: PBO:0041381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 2","termid":"PBO:0041381"}


id: PBO:0041483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 96","termid":"PBO:0041483"}


id: PBO:0082247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082247"}


id: GO:0043379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a newly activated T cell acquires specialized features of a memory T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"immunological memory formation process","termid":"GO:0090715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell differentiation","synonyms":[{"name":"memory T cell development","type":"related"},{"name":"memory T lymphocyte differentiation","type":"exact"},{"name":"memory T-cell differentiation","type":"exact"},{"name":"memory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043379"}


id: PATO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncrowded","termid":"PATO:0000633"}


id: GO:0106256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A hydroperoxy icosatetraenoate = an oxoicosatetraenoate + H2O.","definition_xrefs":["RHEA:55556","PMID:12881489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroperoxy icosatetraenoate dehydratase activity","secondary_identifiers":["EC:4.2.1.152"],"termid":"GO:0106256"}


id: GO:0034385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma lipoprotein particle that has a hydrophobic core enriched in triglycerides surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins. Triglyceride-rich lipoprotein particles transport lipids, which are non-covalently associated with the particles, in the blood.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"triglyceride-rich plasma lipoprotein particle","synonyms":[{"name":"triacylglycerol-rich lipoprotein particle","type":"narrow"},{"name":"triglyceride-rich lipoprotein particle","type":"broad"}],"termid":"GO:0034385"}


id: GO:0140805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-seryl-[protein] + NAD+ = H+ + nicotinamide + O-(ADP-D-ribosyl)-L-seryl-[protein].","definition_xrefs":["RHEA:58232","PMID:32028527","PMID:33186521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-serine ADP-ribosyltransferase activity","termid":"GO:0140805"}


id: PBO:0064895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'alpha","termid":"PBO:0064895"}


id: PBO:0062701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 2","termid":"PBO:0062701"}


id: PBO:0051779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing B2 pseudogene","termid":"PBO:0051779"}


id: GO:0015995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll biosynthetic process","secondary_identifiers":["MetaCyc:CHLOROPHYLL-SYN"],"synonyms":[{"name":"chlorophyll anabolism","type":"exact"},{"name":"chlorophyll biosynthesis","type":"exact"},{"name":"chlorophyll formation","type":"exact"},{"name":"chlorophyll synthesis","type":"exact"}],"termid":"GO:0015995"}


id: PBO:0030593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_glutamate_level","termid":"PBO:0030593"}


id: PBO:0045524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTW domain containing 1","termid":"PBO:0045524"}


id: PBO:0050778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1B","termid":"PBO:0050778"}


id: PBO:0072901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cancer cell invasion","termid":"PBO:0072901"}


id: GO:0008981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protease IV activity (obsolete GO:0008981)","synonyms":[{"name":"protease IV activity","type":"exact"}],"termid":"GO:0008981"}


id: PBO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2473","termid":"PBO:0055057"}


id: GO:1990943
data:
  {"annotated_genes":["SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89534],"is_not":false,"summary":null,"term":"GO:1990943"}]},"cv_name":"molecular_function","definition":"Binding to the replication fork barrier found in the mating type region of fission yeast.","definition_xrefs":["PMID:18723894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork barrier binding","termid":"GO:0031634"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mating type region replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RTS1 barrier binding","type":"exact"},{"name":"RTS1 element binding","type":"exact"}],"termid":"GO:1990943","terms_by_termid":{"GO:1990943":null}}


id: PBO:0091884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm7","termid":"PBO:0091884"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: PBO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor EF-Tu Tuf1","termid":"PBO:0003784"}


id: GO:0035377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of water (H2O) from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"is_a","term_name":"epithelial fluid transport","termid":"GO:0042045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"transepithelial water transport","termid":"GO:0035377"}


id: PBO:0090277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exonuclease, C-terminal domain superfamily","termid":"PBO:0090277"}


id: RO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a localization process (localization covers maintenance of localization as well as its establishment)  and the outcome of this process is to regulate the localization of c.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports_or_maintains_localization_of","termid":"RO:0002313"}


id: FYPO:0001856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during iron starvation","synonyms":[{"name":"normal transcription during iron depletion","type":"exact"},{"name":"normal transcription during iron deprivation","type":"exact"},{"name":"normal transcription during iron ion starvation","type":"exact"},{"name":"normal transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal transcription during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001856"}


id: PBO:0058271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4649","termid":"PBO:0058271"}


id: PBO:0074459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4","termid":"PBO:0074459"}


id: GO:0048099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["PMID:10625531","GOC:jid","PMID:9374402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc lineage restriction","termid":"GO:0035161"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"}


id: PBO:0084074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein; regulates nitrogen starvation response, sporulation, and filamentous growth; farnesylation and palmitoylation required for activity and localization to plasma membrane; activated by increased levels of glycolysis intermediate fructose-1,6-bisphosphate; homolog of mammalian Ras proto-oncogenes; RAS2 has a paralog, RAS1, that arose from the whole genome duplication","termid":"PBO:0084074"}


id: FYPO:0004153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of flocculation when the population is in stationary phase. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PomBase:mah","PMID:15047724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased flocculation in stationary phase","termid":"FYPO:0004153"}


id: PBO:0075136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A","termid":"PBO:0075136"}


id: GO:2001065
data:
  {"annotated_genes":["SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114644],"is_not":false,"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to mannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mannan binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoglycan binding","type":"related"}],"termid":"GO:2001065","terms_by_termid":{"GO:2001065":null}}


id: SO:0000077
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region sequence that is complementary to a sequence of messenger RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense","secondary_identifiers":["http://en.wikipedia.org/wiki/Antisense"],"termid":"SO:0000077"}


id: PBO:0031832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_morphology","termid":"PBO:0031832"}


id: GO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP required for the ATP-dependent assembly of nucleosome cores, in decondensation of sperm chromatin and in other histone-involving processes.","definition_xrefs":["EC:3.6.4.11"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasmin ATPase activity (obsolete GO:0008572)","synonyms":[{"name":"nucleoplasmin ATPase activity","type":"exact"}],"termid":"GO:0008572"}


id: PBO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4A","termid":"PBO:0061881"}


id: SO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes gain of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_gain_of_function_variant","synonyms":[{"name":"polypeptide gain of function variant","type":"exact"}],"termid":"SO:0001557"}


id: PBO:0064972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 28, pseudogene","termid":"PBO:0064972"}


id: PBO:0015219
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SEC14","termid":"PBO:0015219"}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: PBO:0000929
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.2.1.8","termid":"PBO:0000929"}


id: GO:0043273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + H2O = CDP + H+ + phosphate. May or may not be coupled to another reaction.","definition_xrefs":["RHEA:29387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"CTPase activity","secondary_identifiers":["GO:0061747","GO:0061748"],"synonyms":[{"name":"CTPase activity, coupled","type":"related"},{"name":"cytidine triphosphatase activity","type":"exact"},{"name":"single-stranded DNA-dependent CTPase activity","type":"narrow"}],"termid":"GO:0043273"}


id: PBO:0048804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha z","termid":"PBO:0048804"}


id: PBO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 6","termid":"PBO:0045648"}


id: PBO:0005893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Histidine, mitochondrial","termid":"PBO:0005893"}


id: PR:000037316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein Crb2 (Schizosaccharomyces pombe) that is phosphorylated in two Thr residues within CDK consensus TP motifs, and a Thr within the sequence VPETV. Example: UniProtKB:P87074-1, Thr-187/Thr-215/Thr-235, MOD:00047.","definition_xrefs":["PMID:24074952","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crb2/Phos(T187,T215,T235)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"Crb2 phosphorylated","type":"related"},{"name":"DNA repair protein rhp9 phosphorylated 1 (Schizosaccharomyces pombe)","type":"related"},{"name":"crb2/Phos(T187,T215,T235)","type":"exact"}],"termid":"PR:000037316"}


id: PBO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 12","termid":"PBO:0070904"}


id: GO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased.","definition_xrefs":["GOC:go_curators","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure","synonyms":[{"name":"activation of blood pressure","type":"narrow"},{"name":"stimulation of blood pressure","type":"narrow"},{"name":"up regulation of blood pressure","type":"exact"},{"name":"up-regulation of blood pressure","type":"exact"},{"name":"upregulation of blood pressure","type":"exact"}],"termid":"GO:0045777"}


id: PBO:0013778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Mdb1","termid":"PBO:0013778"}


id: GO:0016863
data:
  {"annotated_genes":["SJAG_04307","SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000247"},{"annotations":[98048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["EC:5.3.3.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03598":null,"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing C=C bonds","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing C=C bonds","type":"exact"}],"termid":"GO:0016863","terms_by_termid":{"GO:0000247":null,"GO:0004452":null}}


id: PBO:0070037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1334, pseudogene","termid":"PBO:0070037"}


id: PR:O74841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An FAD synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23293:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.04c","secondary_identifiers":["UniProtKB:O74841"],"synonyms":[{"name":"FAD pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FLAD1","type":"exact"},{"name":"flavin adenine dinucleotide synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74841"}


id: PBO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 12","termid":"PBO:0048091"}


id: GO:0010658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations.","definition_xrefs":["GOC:mtg_apoptosis","CL:0000737","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell apoptotic process","synonyms":[{"name":"striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010658"}


id: GO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + a quinone = 7,9,9'-tri-cis-neurosporene + a quinol.","definition_xrefs":["RHEA:30959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9,9'-dicis-carotene:quinone oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-11356","EC:1.3.5.6","KEGG_REACTION:R09656"],"synonyms":[{"name":"9,9'-di-cis-zeta-carotene desaturase activity","type":"broad"},{"name":"ZDS activity","type":"broad"},{"name":"zeta-carotene desaturase activity","type":"broad"}],"termid":"GO:0052886"}


id: PBO:0071185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 26","termid":"PBO:0071185"}


id: SO:0000763
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000763 fosmid_clone (obsolete SO:0000763)","termid":"SO:0000763"}


id: PBO:0041405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 120","termid":"PBO:0041405"}


id: SO:0002098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from an immunoglobulin gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_pseudogene","termid":"SO:0002097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin_pseudogene","synonyms":[{"name":"immunoglobulin pseudogene","type":"exact"}],"termid":"SO:0002098"}


id: GO:0005803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A small subcellular vesicle, or granule, surrounded by a single-layered membrane; formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory vesicle (obsolete GO:0005803)","synonyms":[{"name":"secretory vesicle","type":"exact"},{"name":"transition vesicle","type":"narrow"}],"termid":"GO:0005803"}


id: PBO:0036274
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil domain Telomerase Regulatory protein","termid":"PBO:0036274"}


id: GO:0060865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand and contributing to the decrease in the rate or frequency of floral organ abscission.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signaling pathway (obsolete GO:0060865)","synonyms":[{"name":"negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0060865"}


id: PBO:0050951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon beta 1","termid":"PBO:0050951"}


id: PBO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 3","termid":"PBO:0043135"}


id: PBO:0064171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group V","termid":"PBO:0064171"}


id: GO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung vasculature development","synonyms":[{"name":"pulmonary vasculature development","type":"exact"}],"termid":"GO:0060426"}


id: GO:0046372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-arabinose, the D-enantiomer of arabino-pentose. D-arabinose occurs in plant glycosides and is a constituent of arabinonucleosides.","definition_xrefs":["GOC:jsg","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-arabinose metabolic process","synonyms":[{"name":"D-arabinose metabolism","type":"exact"}],"termid":"GO:0046372"}


id: PBO:0052027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jupiter microtubule associated homolog 1","termid":"PBO:0052027"}


id: GO:1905340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to kinetochore.","definition_xrefs":["GO_REF:0000058","PMID:22581055","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to kinetochore","synonyms":[{"name":"regulation of condensin localization to kinetochore","type":"narrow"},{"name":"regulation of protein localisation to kinetochore","type":"exact"}],"termid":"GO:1905340"}


id: GO:0003873
data:
  {"annotated_genes":["SJAG_02713","SJAG_02596","SJAG_03336","SJAG_00039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85188,89043,96103,97540],"is_not":false,"summary":null,"term":"GO:0003873"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 6-phosphate + ATP = beta-D-fructose 2,6-bisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.105","RHEA:15653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"6-phosphofructo-2-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02732","MetaCyc:6-PHOSPHOFRUCTO-2-KINASE-RXN","Reactome:R-HSA-71802"],"synonyms":[{"name":"6-phosphofructo-2-kinase (phosphorylating)","type":"related"},{"name":"6-phosphofructose 2-kinase activity","type":"related"},{"name":"ATP:D-fructose-6-phosphate 2-phosphotransferase activity","type":"related"},{"name":"ATP:beta-D-fructose-6-phosphate 2-phosphotransferase activity","type":"related"},{"name":"fructose 6-phosphate 2-kinase activity","type":"related"},{"name":"phosphofructokinase 2 activity","type":"related"}],"termid":"GO:0003873","terms_by_termid":{"GO:0003873":null}}


id: GO:0052089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the salicylic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"},{"relation_name":"is_a","term_name":"regulation of salicylic acid mediated signaling pathway","termid":"GO:2000031"},{"relation_name":"regulates","term_name":"systemic acquired resistance, salicylic acid mediated signaling pathway","termid":"GO:0009862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation by symbiont of host salicylic acid-mediated defense response","secondary_identifiers":["GO:0052284"],"synonyms":[{"name":"modulation by organism of host SA-mediated defense response","type":"exact"},{"name":"modulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052089"}


id: GO:0075081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated signal transduction (obsolete GO:0075081)","termid":"GO:0075081"}


id: PBO:0076997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 11","termid":"PBO:0076997"}


id: PBO:0018229
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ERG20","termid":"PBO:0018229"}


id: PBO:0028178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vanadate","termid":"PBO:0028178"}


id: GO:0070096
data:
  {"annotated_genes":["SJAG_03416","SJAG_02361"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87102,106593],"is_not":false,"summary":null,"term":"GO:0070096"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial outer membrane translocase complex.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02361":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0065003","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TOM complex assembly","type":"exact"},{"name":"mitochondrion outer membrane translocase complex assembly","type":"exact"}],"termid":"GO:0070096","terms_by_termid":{"GO:0070096":null}}


id: GO:0034713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type I transforming growth factor beta receptor.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor binding","termid":"GO:0005160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type I transforming growth factor beta receptor binding","secondary_identifiers":["GO:0005120","GO:0005103","GO:0005116"],"synonyms":[{"name":"TGF-beta type I binding","type":"exact"},{"name":"babo binding","type":"narrow"},{"name":"babo ligand","type":"narrow"},{"name":"baboon binding","type":"narrow"},{"name":"baboon ligand","type":"narrow"},{"name":"baboon receptor ligand","type":"narrow"},{"name":"sax binding","type":"narrow"},{"name":"sax ligand","type":"narrow"},{"name":"saxophone binding","type":"narrow"},{"name":"saxophone ligand","type":"narrow"},{"name":"thickveins binding","type":"narrow"},{"name":"thickveins ligand","type":"narrow"},{"name":"tkv binding","type":"narrow"},{"name":"tkv ligand","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"related"},{"name":"transforming growth factor beta receptor type I binding","type":"exact"},{"name":"type I TGF-beta binding","type":"exact"}],"termid":"GO:0034713"}


id: PBO:0090052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto2","termid":"PBO:0090052"}


id: GO:0009259
data:
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id: GO:1902586
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id: GO:0071766
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id: GO:0034066
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id: GO:0103068
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id: PBO:0034756
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id: FYPO:0000928
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id: PBO:0013126
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id: PR:Q9US47
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id: GO:0070014
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id: PBO:0087127
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id: PBO:0075518
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id: GO:0032030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin I complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin I binding","termid":"GO:0017024"},{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"myosin I light chain binding","termid":"GO:0032030"}


id: PBO:0031912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease, minor transcript isoform Apn1","termid":"PBO:0031912"}


id: FYPO:0001047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal nuclear division and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe (obsolete FYPO:0001047)","synonyms":[{"name":"mitotic catastrophe during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe during vegetative growth","type":"exact"}],"termid":"FYPO:0001047"}


id: PBO:0058123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4425","termid":"PBO:0058123"}


id: PBO:0078125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-7 (pseudogene)","termid":"PBO:0078125"}


id: PBO:0071635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 54","termid":"PBO:0071635"}


id: PBO:0077448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 181","termid":"PBO:0077448"}


id: GO:0009227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule catabolic process","termid":"GO:0034656"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleotide-sugar catabolic process","synonyms":[{"name":"nucleotide-sugar breakdown","type":"exact"},{"name":"nucleotide-sugar catabolism","type":"exact"},{"name":"nucleotide-sugar degradation","type":"exact"}],"termid":"GO:0009227"}


id: PBO:0024805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables","termid":"PBO:0024805"}


id: PBO:0088277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase Pro3","termid":"PBO:0088277"}


id: SO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Residues which interact with a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand_binding_site","termid":"SO:0001657"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_ligand_contact","secondary_identifiers":["BS:00157"],"synonyms":[{"name":"polypeptide ligand contact","type":"exact"},{"name":"protein-ligand interaction","type":"related"}],"termid":"SO:0001105"}


id: MOD:00441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a geranylgeranyl group.","definition_xrefs":["DeltaMass:0","PubMed:15609361","Unimod:48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranylated residue","synonyms":[{"name":"Geranyl-geranyl","type":"related"},{"name":"GeranylGeranyl","type":"related"},{"name":"Geranylgeranylation","type":"exact"},{"name":"GergerRes","type":"exact"}],"termid":"MOD:00441"}


id: GO:1900601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of endocrocin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"endocrocin catabolic process","synonyms":[{"name":"endocrocin breakdown","type":"exact"},{"name":"endocrocin catabolism","type":"exact"},{"name":"endocrocin degradation","type":"exact"}],"termid":"GO:1900601"}


id: GO:0001522
data:
  {"annotated_genes":["SJAG_01234","SJAG_04754","SJAG_02978","SJAG_03755","SJAG_04065","SJAG_00319","SJAG_03213","SJAG_01172","SJAG_00566","SJAG_01054","SJAG_00088","SJAG_03125","SJAG_00083","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67989,101664,104788],"is_not":false,"summary":null,"term":"GO:0001522"},{"annotations":[87394,88458,102396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[91533,110466,90835,108669,98661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"},{"annotations":[97327,91534,86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[102455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"},{"annotations":[102397,86222,102456,97328,91535,110467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[108670,102398,98662,87395,90836,110468,113312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031119"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine within an RNA molecule.","definition_xrefs":["GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00566":null,"SJAG_01054":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_02978":null,"SJAG_03125":null,"SJAG_03213":null,"SJAG_03572":null,"SJAG_03755":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:Pseudouridine","Wikipedia:Pseudouridylation"],"synonyms":[{"name":"pseudouridylation","type":"exact"}],"termid":"GO:0001522","terms_by_termid":{"GO:0000454":null,"GO:0000455":null,"GO:0001522":null,"GO:0031118":null,"GO:0031119":null,"GO:0031120":null,"GO:1990481":null}}


id: SO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA","secondary_identifiers":["http://www.gencodegenes.org/gencode_biotypes.html","http://en.wikipedia.org/wiki/NcRNA"],"synonyms":[{"name":"INSDC_qualifier:other","type":"broad"},{"name":"known_ncrna","type":"exact"},{"name":"noncoding RNA","type":"exact"}],"termid":"SO:0000655"}


id: PBO:0071898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 36","termid":"PBO:0071898"}


id: PBO:0041501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 75","termid":"PBO:0041501"}


id: PATO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000960 absolute opacity (obsolete PATO:0000960)","termid":"PATO:0000960"}


id: GO:1903118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of urate within an organism or cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000072","PMID:22306318","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete urate homeostasis (obsolete GO:1903118)","termid":"GO:1903118"}


id: GO:0140320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding and sequestering PAMP ligands in order to prevent them from binding and activating to the host PAMP receptor. Usually this activity is encoded by a symbiont or a pathogen to prevent activation of the host innate immune response.","definition_xrefs":["PMID:20724636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor decoy activity","termid":"GO:0140319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"PAMP receptor decoy activity","synonyms":[{"name":"pathogen-associated molecular pattern receptor decoy activity","type":"exact"},{"name":"pattern recognition receptor decoy activity","type":"exact"}],"termid":"GO:0140320"}


id: PBO:0074965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-7","termid":"PBO:0074965"}


id: FYECO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrichrome was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ferrichrome","termid":"FYECO:0000420"}


id: PBO:0056511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscleblind like splicing regulator 1","termid":"PBO:0056511"}


id: PBO:0029474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_volume_septated_spheroid_vegetative_cell","termid":"PBO:0029474"}


id: PBO:0056442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 15","termid":"PBO:0056442"}


id: GO:0009658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast organization","synonyms":[{"name":"chloroplast organisation","type":"exact"},{"name":"chloroplast organization and biogenesis","type":"related"}],"termid":"GO:0009658"}


id: PBO:0078238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 20-1","termid":"PBO:0078238"}


id: PBO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase (predicted)","termid":"PBO:0001365"}


id: PBO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Overexpressed Cyr1","termid":"PBO:0000712"}


id: SO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of synthetic nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_oligo","synonyms":[{"name":"synthetic oligo","type":"exact"}],"termid":"SO:0001247"}


id: PBO:0003080
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains HSE element","termid":"PBO:0003080"}


id: PBO:0004075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Nak1","termid":"PBO:0004075"}


id: PBO:0084847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L16 ribosomal protein; synthetic lethality with hac1 mutation suggests a possible role in synthesis of precursors for protein glycosylation","termid":"PBO:0084847"}


id: PBO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp2 (predicted)","termid":"PBO:0005382"}


id: PBO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/DEAH box helicase","termid":"PBO:0002412"}


id: GO:0016602
data:
  {"annotated_genes":["SJAG_05247","SJAG_04607","SJAG_01062","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89895,100425,105878,108060],"is_not":false,"summary":null,"term":"GO:0016602"}]},"cv_name":"cellular_component","definition":"A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.","definition_xrefs":["PMID:7828851","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_01062":null,"SJAG_04607":null,"SJAG_05247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"CCAAT-binding factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CBF complex","type":"related"},{"name":"NF-Y transcription factor complex","type":"related"},{"name":"nuclear transcription factor Y complex","type":"related"}],"termid":"GO:0016602","terms_by_termid":{"GO:0016602":null}}


id: GO:0009770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P700 chlorophylls on photosystem I donate an electron to a loosely bound Quinone acceptor molecule X, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["ISBN:0716731363","ISBN:0816017360","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem I (obsolete GO:0009770)","termid":"GO:0009770"}


id: PBO:0045141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 10","termid":"PBO:0045141"}


id: PBO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 51","termid":"PBO:0071210"}


id: GO:0019338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentachlorophenol metabolic process","termid":"GO:0018961"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol catabolic process","secondary_identifiers":["MetaCyc:PCPDEG-PWY"],"synonyms":[{"name":"pentachlorophenol breakdown","type":"exact"},{"name":"pentachlorophenol catabolism","type":"exact"},{"name":"pentachlorophenol degradation","type":"exact"}],"termid":"GO:0019338"}


id: PBO:0062431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 93 pseudogene","termid":"PBO:0062431"}


id: GO:0003717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription by RNA polymerase II.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription termination factor activity (obsolete GO:0003717)","synonyms":[{"name":"Pol II transcription termination factor activity","type":"exact"},{"name":"RNA polymerase II transcription termination factor activity","type":"exact"}],"termid":"GO:0003717"}


id: PBO:0084245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner plaque spindle pole body (SPB) component; gamma-tubulin small complex (gamma-TuSC) receptor that interacts with Spc98p to recruit the complex to the nuclear side of the SPB, connecting nuclear microtubules to the SPB; promotes gamma-TuSC assembly and oligomerization to initiate microtubule nucleation; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner; ortholog of human pericentrin (kendrin)","termid":"PBO:0084245"}


id: GO:0010298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrocamalexic acid = camalexin + CO2 + H+.","definition_xrefs":["PMID:16766671","MetaCyc:RXN-8275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"dihydrocamalexic acid decarboxylase activity","secondary_identifiers":["RHEA:34807"],"termid":"GO:0010298"}


id: GO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an icosanoid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"icosanoid receptor activity","synonyms":[{"name":"eicosanoid receptor activity","type":"exact"}],"termid":"GO:0004953"}


id: FYPO:0001033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal double-strand break repair","synonyms":[{"name":"normal double-strand break repair during mitotic cell cycle","type":"related"},{"name":"normal double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0001033"}


id: GO:0140736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of lovastin.","definition_xrefs":["PMID:10334994","PMID:19781329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"positively_regulates","term_name":"lovastatin biosynthetic process","termid":"GO:0140735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"positive regulation of lovastatin biosynthetic process","synonyms":[{"name":"positive regulation of mevacor biosynthetic process","type":"exact"},{"name":"positive regulation of mevinolin biosynthetic process","type":"exact"},{"name":"positive regulation of monacolin K biosynthetic process","type":"exact"}],"termid":"GO:0140736"}


id: PBO:0013459
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol DeHydrogenase","termid":"PBO:0013459"}


id: PBO:0049837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"highly divergent homeobox","termid":"PBO:0049837"}


id: SO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that is never translated into a protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_primary_transcript","synonyms":[{"name":"nc primary transcript","type":"exact"},{"name":"noncoding primary transcript","type":"exact"}],"termid":"SO:0000483"}


id: PBO:0043938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 2","termid":"PBO:0043938"}


id: GO:0038102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting with an activin receptor complex to reduce the action of another ligand, the agonist. A receptor antagonist does not initiate signaling upon binding to a receptor, but instead blocks an agonist from binding to the receptor.","definition_xrefs":["PMID:15062104","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0140678","GO:0098772","GO:0005488"],"is_obsolete":false,"name":"activin receptor antagonist activity","termid":"GO:0038102"}


id: FYPO:0004279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of hypoxanthine DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal hypoxanthine DNA N-glycosylase activity","termid":"FYPO:0004279"}


id: PBO:0082526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell fusion regulator; cytoplasmic protein localized to shmoo tip; required for alignment of parental nuclei before nuclear fusion during mating; contains a Dbl-homology domain; binds specifically with activated Cdc42p","termid":"PBO:0082526"}


id: PBO:0081608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 530","termid":"PBO:0081608"}


id: PBO:0049033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 20","termid":"PBO:0049033"}


id: GO:0075089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont G protein-coupled receptor signal transduction (obsolete GO:0075089)","synonyms":[{"name":"negative regulation by host of symbiont G-protein coupled receptor protein signal transduction","type":"exact"}],"termid":"GO:0075089"}


id: PBO:0067011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 19, pseudogene","termid":"PBO:0067011"}


id: GO:0106147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fraxetin.","definition_xrefs":["PMID:29581584","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fraxetin biosynthesis","termid":"GO:0106147"}


id: PBO:0068012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 317","termid":"PBO:0068012"}


id: GO:0018479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NAD+ + H2O = benzoate + NADH + H+.","definition_xrefs":["EC:1.2.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"},{"relation_name":"is_a","term_name":"benzaldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0019115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:11840","MetaCyc:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN","UM-BBD_reactionID:r0269"],"synonyms":[{"name":"benzaldehyde (NAD) dehydrogenase activity","type":"related"},{"name":"benzaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018479"}


id: PBO:0086700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; located adjacent to ARS503 and the telomere on the left arm of chromosome V; regulated by inositol/choline","termid":"PBO:0086700"}


id: GO:0019446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tyrosine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine catabolic process to phosphoenolpyruvate (obsolete GO:0019446)","synonyms":[{"name":"tyrosine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"tyrosine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019446"}


id: GO:0150173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylcholine metabolic process.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:30074985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylcholine metabolic process","termid":"GO:0150173"}


id: _global:quality_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality_of","secondary_identifiers":["RO:0000080"],"termid":"_global:quality_of"}


id: GO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a trace amine to initiate a change in cell activity. Trace amines are biogenic amines that are synthesized from aromatic amino acids and are substrates for monoamine oxidase, and are therefore detectable only at trace levels in mammals.","definition_xrefs":["GOC:mah","PMID:19325074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"trace-amine receptor activity","termid":"GO:0001594"}


id: GO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: synephrine = (4-hydroxyphenyl)acetaldehyde + methylammonium.","definition_xrefs":["RHEA:32203","EC:4.2.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"synephrine dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03359","MetaCyc:SYNEPHRINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"1-(4-hydroxyphenyl)-2-(methylamino)ethanol hydro-lyase (methylamine-forming)","type":"related"}],"termid":"GO:0050315"}


id: GO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid","synonyms":[{"name":"response to jasmonic acid stimulus","type":"exact"}],"termid":"GO:0009753"}


id: PR:Q9Y7I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.20 gene.","definition_xrefs":["UniProtKB:Q9Y7I1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B3.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.20","synonyms":[{"name":"Spom972h-SPAC1B3.20","type":"exact"}],"termid":"PR:Q9Y7I1"}


id: GO:1900299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of hexasaccharide transport","termid":"GO:1900297"},{"relation_name":"positively_regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexasaccharide transport","synonyms":[{"name":"activation of hexasaccharide transport","type":"narrow"},{"name":"up regulation of hexasaccharide transport","type":"exact"},{"name":"up-regulation of hexasaccharide transport","type":"exact"},{"name":"upregulation of hexasaccharide transport","type":"exact"}],"termid":"GO:1900299"}


id: PBO:0041304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 6","termid":"PBO:0041304"}


id: PBO:0054957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2371","termid":"PBO:0054957"}


id: PBO:0052714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 6","termid":"PBO:0052714"}


id: GO:0032938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to oxidative stress","termid":"GO:0032938"}


id: PBO:0038642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 9","termid":"PBO:0038642"}


id: GO:0051796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle maturation","termid":"GO:0048817"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"negatively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of timing of catagen","synonyms":[{"name":"down regulation of catagen","type":"related"},{"name":"down-regulation of catagen","type":"related"},{"name":"downregulation of catagen","type":"related"},{"name":"inhibition of catagen","type":"narrow"},{"name":"negative regulation of catagen","type":"related"}],"termid":"GO:0051796"}


id: PBO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tacrolimus_during_salt_stress","termid":"PBO:0030456"}


id: PBO:0072515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 44","termid":"PBO:0072515"}


id: PBO:0055992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and WD repeat domain containing 1","termid":"PBO:0055992"}


id: GO:0045239
data:
  {"annotated_genes":["SJAG_01524","SJAG_03920","SJAG_02398","SJAG_02464","SJAG_01671","SJAG_03163","SJAG_00260","SJAG_03290","SJAG_06382","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85031,85395,112915,109377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005749"},{"annotations":[102906,108249,106315,83655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[111133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042709"},{"annotations":[86120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"Any of the heteromeric enzymes that act in the TCA cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01524":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tricarboxylic acid cycle heteromeric enzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TCA cycle enzyme complex","type":"exact"}],"termid":"GO:0045239","terms_by_termid":{"GO:0005749":null,"GO:0009361":null,"GO:0042709":null,"GO:0045252":null}}


id: PBO:0049599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 2","termid":"PBO:0049599"}


id: GO:0106309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + progesterone + reduced [NADPH--hemoprotein reductase] = 21-hydroxyprogesterone + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:25855791","RHEA:50304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"progesterone 21-hydroxylase activity","termid":"GO:0106309"}


id: GO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannan, a group of polysaccharides containing a backbone composed of a polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannan metabolic process","synonyms":[{"name":"mannan metabolism","type":"exact"}],"termid":"GO:0010412"}


id: PBO:0063633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 11","termid":"PBO:0063633"}


id: GO:0045644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eosinophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of eosinophil differentiation","termid":"GO:0045643"},{"relation_name":"negatively_regulates","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil differentiation","synonyms":[{"name":"down regulation of eosinophil differentiation","type":"exact"},{"name":"down-regulation of eosinophil differentiation","type":"exact"},{"name":"downregulation of eosinophil differentiation","type":"exact"},{"name":"inhibition of eosinophil differentiation","type":"narrow"}],"termid":"GO:0045644"}


id: PBO:0056689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 10","termid":"PBO:0056689"}


id: GO:0061082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a myeloid cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}


id: GO:1900790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pseurotin A biosynthetic process","synonyms":[{"name":"Pseurotin anabolism","type":"related"},{"name":"Pseurotin biosynthesis","type":"related"},{"name":"Pseurotin biosynthetic process","type":"related"},{"name":"Pseurotin formation","type":"related"},{"name":"Pseurotin synthesis","type":"related"},{"name":"pseurotin A anabolism","type":"exact"},{"name":"pseurotin A biosynthesis","type":"exact"},{"name":"pseurotin A formation","type":"exact"},{"name":"pseurotin A synthesis","type":"exact"}],"termid":"GO:1900790"}


id: PBO:0066394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 4","termid":"PBO:0066394"}


id: GO:0004648
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88400],"is_not":false,"summary":null,"term":"GO:0004648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"O-phospho-L-serine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PSERTRANSAM-RXN","RHEA:14329","Reactome:R-HSA-977333","GO:0004646"],"synonyms":[{"name":"3-O-phospho-L-serine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"3-phosphoserine aminotransferase activity","type":"related"},{"name":"3PHP transaminase activity","type":"related"},{"name":"L-phosphoserine aminotransferase activity","type":"related"},{"name":"PSAT activity","type":"related"},{"name":"PdxC","type":"related"},{"name":"SerC","type":"related"},{"name":"hydroxypyruvic phosphate--glutamic transaminase activity","type":"related"},{"name":"phosphohydroxypyruvate transaminase activity","type":"related"},{"name":"phosphohydroxypyruvic--glutamic transaminase activity","type":"related"},{"name":"phosphoserine aminotransferase activity","type":"broad"},{"name":"phosphoserine transaminase activity","type":"broad"}],"termid":"GO:0004648","terms_by_termid":{"GO:0004648":null}}


id: GO:0047559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate + NAD(P)+ = (4R,5S)-4,5,6-trihydroxy-2,3-dioxohexanoate + NAD(P)H + H+.","definition_xrefs":["MetaCyc:3-DEHYDRO-L-GULONATE-2-DEHYDROGENASE-RXN","EC:1.1.1.130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-dehydro-L-gulonate 2-dehydrogenase activity","synonyms":[{"name":"2,3-diketo-L-gulonate reductase activity","type":"related"},{"name":"3-dehydro-L-gulonate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"3-keto-L-gulonate dehydrogenase activity","type":"related"},{"name":"3-ketogulonate dehydrogenase activity","type":"related"}],"termid":"GO:0047559"}


id: SO:1000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000109 mutation_causing_out_of_frame_polypeptide_C_terminal_elongation (obsolete SO:1000109)","synonyms":[{"name":"mutation causing out of frame polypeptide C terminal elongation","type":"exact"},{"name":"out of frame polypeptide C-terminal elongation","type":"exact"}],"termid":"SO:1000109"}


id: PR:000050560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the tif211 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC3G9.09c","termid":"PR:000050560"}


id: FYPO:0003777
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum","termid":"FYPO:0006377"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"abnormal protein localization to ER during vegetative growth","type":"exact"},{"name":"abnormal protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003777","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt4","termid":"PBO:0018058"}


id: PBO:0109627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 2 (pseudogene)","termid":"PBO:0109627"}


id: PR:Q9HDZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr101 gene.","definition_xrefs":["UniProtKB:Q9HDZ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C589.09, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.09","synonyms":[{"name":"Spom972h-csr101","type":"exact"}],"termid":"PR:Q9HDZ5"}


id: GO:0033855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + nicotianamine = 3''-deamino-3''-oxonicotianamine + L-glutamate.","definition_xrefs":["EC:2.6.1.80","RHEA:22104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nicotianamine aminotransferase activity","secondary_identifiers":["KEGG_REACTION:R07277","MetaCyc:2.6.1.80-RXN"],"synonyms":[{"name":"NAAT","type":"related"},{"name":"NAAT-I","type":"related"},{"name":"NAAT-II","type":"related"},{"name":"NAAT-III","type":"related"},{"name":"nicotianamine transaminase activity","type":"related"},{"name":"nicotianamine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0033855"}


id: PBO:0074097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 11","termid":"PBO:0074097"}


id: FYPO:0002905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000293"],"is_obsolete":false,"name":"normal telomere maintenance","synonyms":[{"name":"normal telomere maintenance during mitotic cell cycle","type":"related"},{"name":"normal telomere maintenance during vegetative growth","type":"exact"}],"termid":"FYPO:0002905"}


id: GO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin3 (DDX20), Gemin4, and Gemin5, and can bind to snRNAs; may be an intermediate in SMN complex assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Gemin3-Gemin4-Gemin5 complex","termid":"GO:0034716"}


id: PBO:0083611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious ORF that overlaps YDR520C; mutant increases expression of PIS1 and RPL3 in glycerol","termid":"PBO:0083611"}


id: PBO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GAR1","termid":"PBO:0017040"}


id: GO:1900710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of tensidol B biosynthetic process","synonyms":[{"name":"regulation of tensidol B anabolism","type":"exact"},{"name":"regulation of tensidol B biosynthesis","type":"exact"},{"name":"regulation of tensidol B formation","type":"exact"},{"name":"regulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900710"}


id: GO:0072233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric thick ascending limb over time, from its formation to the mature structure. The metanephric thick ascending limb is the last part of the metanephric loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick ascending limb development","termid":"GO:0072023"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric thick ascending limb development","synonyms":[{"name":"metanephric TAL development","type":"exact"}],"termid":"GO:0072233"}


id: FYPO:0003834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in the duration of meiotic interphase, which begins after cytokinesis and ends when meiotic prophase begins, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0051328","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of meiotic interphase","termid":"FYPO:0003834"}


id: PBO:0065827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6B, member RAS oncogene family","termid":"PBO:0065827"}


id: GO:0010108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which a glutamine stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of glutamine (obsolete GO:0010108)","synonyms":[{"name":"glutamine detection","type":"exact"},{"name":"glutamine perception","type":"related"},{"name":"glutamine sensing","type":"related"}],"termid":"GO:0010108"}


id: GO:0061246
data:
  {"annotated_genes":["SJAG_00845","SJAG_00236","SJAG_04461","SJAG_00596","SJAG_03581","SJAG_03637","SJAG_02022","SJAG_01799","SJAG_00661","SJAG_00333"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100697],"is_not":false,"summary":null,"term":"GO:0061246"},{"annotations":[101523,96337,89925,99877],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[100701,114906,109235,96340,91847,101526,87329,90760],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a bipolar intracellular organization or cell growth patterns that regulates the shaping of a cell.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity","termid":"GO:0061245"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061246","terms_by_termid":{"GO:0061246":null,"GO:2000100":null,"GO:2000247":null}}


id: PBO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 1","termid":"PBO:0043318"}


id: PBO:0030978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030978"}


id: GO:0052804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitroimidazoles, imidazole derivatives with a nitro group attached to one ring.","definition_xrefs":["PMID:16387854","PMID:19039139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imidazole-containing compound catabolic process","termid":"GO:0052805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroimidazole catabolic process","synonyms":[{"name":"nitroimidazole breakdown","type":"exact"},{"name":"nitroimidazole catabolism","type":"exact"},{"name":"nitroimidazole degradation","type":"exact"}],"termid":"GO:0052804"}


id: MOD:01664
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 7'-hydroxy-L-tryptophan.","definition_xrefs":["RESID:AA0520","PubMed:20223990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7'-hydroxy-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(7-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"7'-hydroxy-L-tryptophan","type":"exact"},{"name":"7-hydroxy-L-tryptophan","type":"exact"}],"termid":"MOD:01664"}


id: GO:0018352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and pyridoxal-5-phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}


id: PBO:0031423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_phenotype","termid":"PBO:0031423"}


id: PATO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's processing a surface free of roughness or irregularities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth","termid":"PATO:0000701"}


id: PBO:0090266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis and translation Rli1","termid":"PBO:0090266"}


id: PBO:0068954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 198, pseudogene","termid":"PBO:0068954"}


id: PBO:0041417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 alpha chain","termid":"PBO:0041417"}


id: GO:0047796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexane-1,3-dione + H2O = 5-oxohexanoate + H+.","definition_xrefs":["RHEA:16473","EC:3.7.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"cyclohexane-1,3-dione hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03211","MetaCyc:CYCLOHEXANE-13-DIONE-HYDROLASE-RXN"],"synonyms":[{"name":"1,3-cyclohexanedione hydrolase activity","type":"related"},{"name":"cyclohexane-1,3-dione acylhydrolase (decyclizing)","type":"related"}],"termid":"GO:0047796"}


id: GO:0009544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein complex that catalyzes the phosphorylation of ADP to ATP in chloroplasts.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"chloroplast ATP synthase complex","termid":"GO:0009544"}


id: GO:0090556
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731","SJAG_01945","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90610,94113,95644,108685],"is_not":false,"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:20224745","RHEA:38567","GOC:ab","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase-coupled phosphatidylserine transporter activity","type":"broad"},{"name":"ATPase-dependent phosphatidylserine transporter activity","type":"broad"},{"name":"phosphatidylserine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylserine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090556","terms_by_termid":{"GO:0090556":null}}


id: PBO:0086963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory gamma subunit of fatty acid synthase (FAS); ATPase dedicated chaperone that adapts proteasome assembly to stress; induced upon stress; interacts with Rpt6p to assist its pairing to Rpt3p and early steps in proteasome biogenesis; associates with ribosomes; heterozygous deletion demonstrated increases in chromosome instability in a rad9 deletion background; protein abundance is decreased upon intracellular iron depletion","termid":"PBO:0086963"}


id: GO:0000101
data:
  {"annotated_genes":["SJAG_00991","SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62994,115125,109877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[89508],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of amino acids containing sulfur (cystine, methionine and their derivatives) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_04295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sulfur amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulphur amino acid transport","type":"exact"}],"termid":"GO:0000101","terms_by_termid":{"GO:1903712":null,"GO:1905626":null}}


id: PBO:0078094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 3","termid":"PBO:0078094"}


id: PBO:0029654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock","termid":"PBO:0029654"}


id: PBO:0017466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genomically_related_to","termid":"PBO:0017466"}


id: PBO:0066695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 1","termid":"PBO:0066695"}


id: GO:1990655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 4 iron, 3 sulfur (4Fe-3S) cluster, an uncommon iron-sulfur cluster with unique properties found in oxygen-tolerant Ni-Fe hydrogenases of various bacteria.","definition_xrefs":["PMID:23267108","GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"4 iron, 3 sulfur cluster binding","synonyms":[{"name":"4Fe-3S cluster binding","type":"related"}],"termid":"GO:1990655"}


id: PBO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 27","termid":"PBO:0046233"}


id: PBO:0058651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6780a","termid":"PBO:0058651"}


id: PBO:0076143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 2","termid":"PBO:0076143"}


id: GO:0031735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR10 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR10 chemokine receptor binding","synonyms":[{"name":"CCR10 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031735"}


id: GO:0071535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RING-like zinc finger domain domain of a protein. The RING-like domain is a zinc finger domain that is related to the C3HC4 RING finger domain.","definition_xrefs":["GOC:mah","InterPro:IPR014857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RING-like zinc finger domain binding","termid":"GO:0071535"}


id: PBO:0057234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 421","termid":"PBO:0057234"}


id: PBO:0084665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial acetyl-coenzyme A carboxylase; catalyzes production of malonyl-CoA in mitochondrial fatty acid biosynthesis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress; genetic and comparative analysis suggests that translation begins at a non-canonical (Ile) start codon at -372 relative to the annotated start codon","termid":"PBO:0084665"}


id: PBO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain","termid":"PBO:0048079"}


id: PBO:0070884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 16","termid":"PBO:0070884"}


id: FYPO:0003867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured in the cell is higher than normal when the cell is in G0 phase. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during G0","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during G0","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cell quiescence","type":"exact"},{"name":"increased level of ubiquitinated protein in cell during quiescence","type":"exact"},{"name":"increased ubiquitinated protein level during G0","type":"exact"}],"termid":"FYPO:0003867"}


id: FYPO:0006164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to linear element","termid":"FYPO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to linear element","synonyms":[{"name":"decreased protein localisation to linear element","type":"exact"},{"name":"reduced protein localization to linear element","type":"exact"}],"termid":"FYPO:0006164"}


id: PBO:0040427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 4","termid":"PBO:0040427"}


id: PR:P32825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine carboxypeptidase CPVL that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase sxa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.03c","secondary_identifiers":["UniProtKB:P32825"],"synonyms":[{"name":"SPAC1296.03c","type":"related"},{"name":"Spom972h-CPVL","type":"exact"}],"termid":"PR:P32825"}


id: FYPO:0001677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is increased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"increased protein localization to cell division site","termid":"FYPO:0004655"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to medial cortex during vegetative growth","synonyms":[{"name":"increased protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"increased protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"increased protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0001677"}


id: PBO:0085712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in spore wall assembly; shares similarity with Lds1p and Lds2p and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; identified in a screen for mutants with increased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to lipid particles; protein abundance increases in response to DNA replication stress","termid":"PBO:0085712"}


id: PBO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_mislocalized_to_nucleus_and_spindle_pole_body","termid":"PBO:0034641"}


id: GO:0006787
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin breakdown","type":"related"},{"name":"porphyrin catabolic process","type":"related"},{"name":"porphyrin catabolism","type":"related"},{"name":"porphyrin degradation","type":"related"}],"termid":"GO:0006787","terms_by_termid":{"GO:0042167":null}}


id: FYPO:0003086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding","termid":"FYPO:0003086"}


id: PBO:0057242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 433","termid":"PBO:0057242"}


id: PBO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, splicing factor 45 ortholog","termid":"PBO:0090395"}


id: MOD:00635
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:10611275","Unimod:325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"10-fluoroethoxyphosphinyl-N-(biotinamidopentyl)decanamide","synonyms":[{"name":"10-ethoxyphosphinyl-N-(biotinamidopentyl)decanamide","type":"related"},{"name":"FP-Biotin","type":"related"}],"termid":"MOD:00635"}


id: PBO:0078379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 3, pseudogene","termid":"PBO:0078379"}


id: PBO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 52","termid":"PBO:0048341"}


id: GO:0014862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by regulating force and velocity of shortening. The force of skeletal muscle contraction is produced by acto-myosin interaction processes through formation of cross bridges. The shortening leads to reduction of length of muscle fiber and sarcomeres.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by chemo-mechanical energy conversion","termid":"GO:0014862"}


id: GO:0010033
data:
  {"annotated_genes":["SJAG_00226","SJAG_07000","SJAG_00993","SJAG_04345","SJAG_01345","SJAG_04429","SJAG_02444","SJAG_02341","SJAG_01709","SJAG_04471","SJAG_01699","SJAG_03032","SJAG_03081","SJAG_01585","SJAG_00990","SJAG_04103","SJAG_00931","SJAG_04283","SJAG_00472","SJAG_02960","SJAG_03611","SJAG_01160","SJAG_00403","SJAG_00681","SJAG_06611","SJAG_00627","SJAG_04118","SJAG_01858","SJAG_00054","SJAG_01626","SJAG_00270","SJAG_04583","SJAG_00131","SJAG_03482","SJAG_02685","SJAG_01457","SJAG_00574","SJAG_02010","SJAG_00530","SJAG_00948","SJAG_01516","SJAG_00126","SJAG_04026","SJAG_01754","SJAG_02774","SJAG_00219","SJAG_01254","SJAG_00766","SJAG_00552","SJAG_03815","SJAG_01051","SJAG_05274","SJAG_05256","SJAG_00173","SJAG_01737","SJAG_04187","SJAG_04571","SJAG_01162","SJAG_03153","SJAG_03657","SJAG_03841","SJAG_00564","SJAG_05022","SJAG_03227","SJAG_01134","SJAG_01556","SJAG_04262","SJAG_02601","SJAG_04904","SJAG_01978","SJAG_02233","SJAG_02419","SJAG_01768","SJAG_00790","SJAG_03340","SJAG_00941","SJAG_01584","SJAG_02923","SJAG_03209","SJAG_02694","SJAG_04612","SJAG_02539","SJAG_03345","SJAG_04312","SJAG_01854","SJAG_04435","SJAG_04567","SJAG_01718","SJAG_04384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98014,102661,105710,112726,102069,90405,103017,105198,111685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[108912],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[101209],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[109686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[101388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[100382,101377,106190,84308,106191,108471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[99101,106192,106193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[105832,105934,104183,106517,109807],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[112192,113368,113522,90672,110383,85872,89125,94884,97402,105756,109994,103351,110251,112939],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[89270,109946,108159,111349,111926,88881,93143,100144,99584,109167,89751,103856,87586,90894,109652,112758,113295,100988,99102,112018,90673,112557,91161,100902,84032,85751,85873,104354,86157,88195,96933,94398,101463,104291,105757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[91718,99653],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[85473,99585,109168,84033],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[85721,89271],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[84562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"},{"annotations":[112581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[107039,86623],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"},{"annotations":[85446,93226,92557,88368,89500,102444],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[84374,103311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"},{"annotations":[101693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000749"},{"annotations":[85475,89126],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[91894,89729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.","definition_xrefs":["PMID:23356676","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 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to organic substance","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990367"],"synonyms":[{"name":"process resulting in tolerance to organic substance","type":"narrow"}],"termid":"GO:0010033","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0010619":null,"GO:0030968":null,"GO:0030970":null,"GO:0031990":null,"GO:0034514":null,"GO:0034620":null,"GO:0036245":null,"GO:0036498":null,"GO:0036503":null,"GO:0046294":null,"GO:0071218":null,"GO:0071244":null,"GO:0071507":null,"GO:0071629":null,"GO:0071630":null,"GO:0097466":null,"GO:0110095":null,"GO:0140041":null,"GO:0180027":null}}


id: PBO:0047621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin, microtubule severing factor","termid":"PBO:0047621"}


id: PBO:0082983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosine deaminase; zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to uracil; of biomedical interest because it also catalyzes the deamination of 5-fluorocytosine (5FC) to form anticancer drug 5-fluorouracil (5FU)","termid":"PBO:0082983"}


id: GO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose.","definition_xrefs":["RHEA:21656","EC:5.1.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"CDP-abequose epimerase activity","secondary_identifiers":["KEGG_REACTION:R04266","MetaCyc:RXN-9160"],"synonyms":[{"name":"CDP-3,6-dideoxy-D-glucose 2-epimerase activity","type":"related"},{"name":"CDP-D-abequose 2-epimerase activity","type":"related"},{"name":"CDP-paratose 2-epimerase activity","type":"related"},{"name":"CDP-paratose epimerase activity","type":"related"},{"name":"CDP-tyvelose 2-epimerase activity","type":"related"},{"name":"cytidine diphosphate paratose-2-epimerase activity","type":"related"},{"name":"cytidine diphosphoabequose epimerase activity","type":"related"},{"name":"cytidine diphosphodideoxyglucose epimerase activity","type":"related"},{"name":"cytidine diphosphoparatose epimerase activity","type":"related"}],"termid":"GO:0047732"}


id: PBO:0077347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 87B","termid":"PBO:0077347"}


id: PBO:0079712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4 pseudogene 2","termid":"PBO:0079712"}


id: PBO:0074829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 25","termid":"PBO:0074829"}


id: PBO:0088165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 domain-containing protein involved in endosomal recycling; forms a complex with Rrt2p that functions in the retromer-mediated pathway for recycling internalized cell-surface proteins; interacts with Trm7p for 2'-O-methylation of N34 of substrate tRNAs; has a role in regulation of Ty1 transposition; human ortholog is WDR6","termid":"PBO:0088165"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PBO:0013006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unrecorded","termid":"PBO:0013006"}


id: PBO:0065420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 7","termid":"PBO:0065420"}


id: PR:O13622
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mss116 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mss116, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.04","synonyms":[{"name":"Spom972h-mss116","type":"exact"}],"termid":"PR:O13622"}


id: PBO:0073182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein M","termid":"PBO:0073182"}


id: PBO:0089884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20 family","termid":"PBO:0089884"}


id: GO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to an external stimulus.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taxis","secondary_identifiers":["Wikipedia:Taxis"],"synonyms":[{"name":"directed movement in response to stimulus","type":"exact"}],"termid":"GO:0042330"}


id: PBO:0085607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of glucose-regulated gene expression; interacts with kinase Snf1p, glucose sensors Snf3p and Rgt2p, TATA-binding Spt15p; regulator of transcription factor Rgt1p; interactions with Pma1p appear to propagate [GAR+]; STD1 has a paralog, MTH1, that arose from the whole genome duplication","termid":"PBO:0085607"}


id: PBO:0018276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4 (predicted)","termid":"PBO:0018276"}


id: SO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A locatable feature on a transcript that is edited.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_transcript_feature","synonyms":[{"name":"edited transcript feature","type":"exact"}],"termid":"SO:0000579"}


id: PBO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Kinase","termid":"PBO:0002305"}


id: PBO:0048182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 3","termid":"PBO:0048182"}


id: PBO:0007419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent amino acid oxidase involved in late endosome to Golgi transport (predicted)","termid":"PBO:0007419"}


id: MOD:01410
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to an hydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated leucine","synonyms":[{"name":"HyLeu","type":"exact"}],"termid":"MOD:01410"}


id: PBO:0070790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 20","termid":"PBO:0070790"}


id: GO:0106386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3R-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH.","definition_xrefs":["PMID:19571038","PMID:25203508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:32711","EC:1.1.1.n12"],"synonyms":[{"name":"(3R)-hydroxyacyl-CoA dehydrogenase (NAD) activity","type":"exact"}],"termid":"GO:0106386"}


id: GO:0019120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid halide bond in substances containing halogen atoms in organic linkage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds","termid":"GO:0016824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","secondary_identifiers":["Reactome:R-HSA-9011595","EC:3.8.1.-"],"termid":"GO:0019120"}


id: PBO:0044854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 135","termid":"PBO:0044854"}


id: FYECO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which the proteasome inhibitor MG132 was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MG132","synonyms":[{"name":"proteasome inhibitor","type":"broad"}],"termid":"FYECO:0000327"}


id: PATO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of particles that have neither a defined volume nor defined shape.","definition_xrefs":["Chemistry:http://chemistry.about.com/od/chemistryglossary/a/gasdefinition.htm","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a gas","synonyms":[{"name":"gaseous","type":"exact"}],"termid":"PATO:0001547"}


id: PBO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEven Binding","termid":"PBO:0000689"}


id: PBO:0058468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5197","termid":"PBO:0058468"}


id: GO:0141058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone demethylase activity","termid":"GO:0032452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0032452","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H4 demethylase activity","termid":"GO:0141058"}


id: PBO:0089284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding ribosome biogenesis protein Nip7","termid":"PBO:0089284"}


id: PBO:0086670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086670"}


id: PBO:0111934
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family 6","termid":"PBO:0111934"}


id: PBO:0041052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 3","termid":"PBO:0041052"}


id: PBO:0078353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 1-1","termid":"PBO:0078353"}


id: GO:0060186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear emergence","synonyms":[{"name":"ear elevation","type":"related"},{"name":"ear extroversion","type":"related"},{"name":"outer ear growth","type":"related"}],"termid":"GO:0060186"}


id: PBO:0003317
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.3","termid":"PBO:0003317"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: PBO:0048903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A7","termid":"PBO:0048903"}


id: PBO:0055411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2841","termid":"PBO:0055411"}


id: PBO:0055295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2722","termid":"PBO:0055295"}


id: PBO:0056307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 3","termid":"PBO:0056307"}


id: PBO:0031412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell","termid":"PBO:0031412"}


id: PBO:0044678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible 1 homolog 2","termid":"PBO:0044678"}


id: GO:0010672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["PMID:12161753","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010672)","synonyms":[{"name":"regulation of meiosis by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"}],"termid":"GO:0010672"}


id: PBO:0059703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 11","termid":"PBO:0059703"}


id: PBO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport","termid":"PBO:0031219"}


id: PBO:0111878
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0111878"}


id: GO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation and organization of a platelet, a non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.","definition_xrefs":["GOC:vk","CL:0000233","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet morphogenesis","termid":"GO:0036344"}


id: PBO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_degradation","termid":"PBO:0031681"}


id: GO:1903479
data:
  {"annotated_genes":["SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94211],"is_not":false,"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"Any actin filament organization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036","GO:0044085","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903479","terms_by_termid":{"GO:1903479":null}}


id: RO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure  (e.g.- a brain region) in which its dendrite receives synaptic input.\\n\\n\t","direct_ancestors":[{"relation_name":"is_a","term_name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrite_synapsed_in","termid":"RO:0002121"}


id: PBO:0067372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 473, pseudogene","termid":"PBO:0067372"}


id: PBO:0087660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of SEAC, a coatomer-related complex that associates dynamically with the vacuole; Npr3p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and leading to inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; null mutant has meiotic defects; human NPRL3 homolog","termid":"PBO:0087660"}


id: GO:0043299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules by a leukocyte.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"leukocyte degranulation","synonyms":[{"name":"immune cell degranulation","type":"exact"},{"name":"immune cell granule exocytosis","type":"exact"},{"name":"leucocyte degranulation","type":"exact"},{"name":"leukocyte granule exocytosis","type":"exact"}],"termid":"GO:0043299"}


id: GO:0060422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a peptidyl-dipeptidase. Peptidyl-dipeptidase activity catalyzes the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0004857","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"peptidyl-dipeptidase inhibitor activity","termid":"GO:0060422"}


id: PBO:0081422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF277 antisense RNA 1","termid":"PBO:0081422"}


id: GO:0018693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + ethylbenzene + H2O = (S)-1-phenylethanol + AH(2).","definition_xrefs":["EC:1.17.99.2","RHEA:17897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ethylbenzene hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-1301","KEGG_REACTION:R05745","UM-BBD_reactionID:r0234"],"synonyms":[{"name":"ethylbenzene dehydrogenase activity","type":"related"},{"name":"ethylbenzene:(acceptor) oxidoreductase activity","type":"related"}],"termid":"GO:0018693"}


id: PBO:0111522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 2","termid":"PBO:0111522"}


id: GO:0034595
data:
  {"annotated_genes":["SJAG_02289","SJAG_04545","SJAG_00063","SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034485"},{"annotations":[107348,83968,104485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"},{"annotations":[97117,104486,107349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the 5-phosphate group of a phosphatidylinositol phosphate.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_02289":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol phosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphoinositide 5-phosphatase activity","type":"exact"},{"name":"polyphosphoinositol lipid 5-phosphatase activity","type":"exact"}],"termid":"GO:0034595","terms_by_termid":{"GO:0004439":null,"GO:0034485":null,"GO:0043813":null}}


id: GO:0036091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:18439143","GOC:rn","PMID:14978214"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0036091)","termid":"GO:0036091"}


id: GO:1990228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of sulfur atoms from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm","PMID:17350958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"sulfurtransferase complex","synonyms":[{"name":"SufE complex","type":"narrow"},{"name":"SufE dimer","type":"narrow"},{"name":"ThiF-ThiS complex","type":"related"},{"name":"sulfur transfer complex","type":"exact"}],"termid":"GO:1990228"}


id: PBO:0065488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 3","termid":"PBO:0065488"}


id: GO:0090235
data:
  {"annotated_genes":["SJAG_05290","SJAG_00082","SJAG_01837","SJAG_03048","SJAG_03126","SJAG_01805","SJAG_04280","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[86205,108141,101343,112172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[98553,89991,86209,107382,112842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"metaphase chromosome alignment","termid":"GO:0051310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaphase plate congression","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome congression","type":"exact"}],"termid":"GO:0090235","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null}}


id: GO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An angiotensin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","PMID:17376402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"angiotensin-activated signaling pathway involved in heart process","synonyms":[{"name":"angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"angiotensin receptor signalling pathway involved in heart process","type":"exact"},{"name":"angiotensin-mediated signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086098"}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: GO:0042746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of the circadian sleep/wake cycle where the organism is not asleep.","definition_xrefs":["PMID:12575468","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}


id: PBO:0048521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 4","termid":"PBO:0048521"}


id: PBO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein (predicted)","termid":"PBO:0001123"}


id: PATO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000075 threshability (obsolete PATO:0000075)","termid":"PATO:0000075"}


id: PR:Q9UTA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C25B8.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.12c","synonyms":[{"name":"Spom972h-SPAC25B8.12c","type":"exact"}],"termid":"PR:Q9UTA6"}


id: PBO:0081245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 16","termid":"PBO:0081245"}


id: PBO:0042977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 3","termid":"PBO:0042977"}


id: PBO:0072105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 3","termid":"PBO:0072105"}


id: PBO:0051644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impact RWD domain protein","termid":"PBO:0051644"}


id: GO:1904413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19590510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle development","synonyms":[{"name":"down regulation of cardiac ventricle development","type":"exact"},{"name":"down-regulation of cardiac ventricle development","type":"exact"},{"name":"downregulation of cardiac ventricle development","type":"exact"},{"name":"inhibition of cardiac ventricle development","type":"narrow"}],"termid":"GO:1904413"}


id: PR:O13789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized beta-glucan synthesis-associated protein C17G6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.11c","synonyms":[{"name":"Spom972h-SPAC17G6.11c","type":"exact"}],"termid":"PR:O13789"}


id: GO:0021518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a commissural neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"commissural neuron differentiation in spinal cord","termid":"GO:0021528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord commissural neuron specification","termid":"GO:0021518"}


id: PBO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 2","termid":"PBO:0043090"}


id: PBO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faster-evolving copy","termid":"PBO:0002347"}


id: GO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: taurochenodeoxycholate + NADPH + H+ + O2 = taurohyocholate + NADP+ + H2O, and lithocholate + NADPH + H+ + O2 = hyodeoxycholate + NADP+ + H2O.","definition_xrefs":["RHEA:23644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"taurochenodeoxycholate 6alpha-hydroxylase activity","secondary_identifiers":["EC:1.14.14.57","MetaCyc:RXN-7977"],"synonyms":[{"name":"CYP3A4","type":"related"},{"name":"CYP4A21","type":"related"},{"name":"taurochenodeoxycholate 6alpha-monooxygenase activity","type":"related"},{"name":"taurochenodeoxycholate,NADPH:oxygen oxidoreductase (6alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033780"}


id: GO:0140608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a cysteine-type endopeptidase.","definition_xrefs":["PMID:32558991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activator activity","termid":"GO:0061133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity","synonyms":[{"name":"caspase activator activator activity","type":"narrow"}],"termid":"GO:0140608"}


id: GO:2000279
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"negatively_regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA anabolism","type":"exact"},{"name":"negative regulation of DNA biosynthesis","type":"exact"},{"name":"negative regulation of DNA formation","type":"exact"},{"name":"negative regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000279","terms_by_termid":{"GO:1904332":null}}


id: PBO:0059173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I-related","termid":"PBO:0059173"}


id: PBO:0011166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4 (predicted)","termid":"PBO:0011166"}


id: PBO:0074746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105B","termid":"PBO:0074746"}


id: PBO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMBR1-like membrane protein","termid":"PBO:0005490"}


id: GO:0033425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"CAU codon-amino acid adaptor activity","synonyms":[{"name":"CAT codon-amino acid adaptor activity","type":"exact"},{"name":"histidine tRNA","type":"related"}],"termid":"GO:0033425"}


id: FYPO:0007740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar ring assembly is normal (i.e. indistinguishable from wild type). Nucleolar rings are structures located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress.","definition_xrefs":["PomBase:mah","PMID:33176152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleolar ring assembly","synonyms":[{"name":"normal NuR assembly","type":"exact"},{"name":"normal nucleolar ring assembly during mitotic cell cycle","type":"related"},{"name":"normal nucleolar ring assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007740"}


id: PBO:0086325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to mammalian monocarboxylate permeases; monocarboxylate permeases are involved in transport of monocarboxylic acids across the plasma membrane but mutant is not deficient in monocarboxylate transport","termid":"PBO:0086325"}


id: GO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"sophorosyloxydocosanoate metabolic process","termid":"GO:0019434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sophorosyloxydocosanoate biosynthetic process","secondary_identifiers":["MetaCyc:SOPHOROSYLOXYDOCOSANOATE-SYN-PWY"],"synonyms":[{"name":"sophorosyloxydocosanoate anabolism","type":"exact"},{"name":"sophorosyloxydocosanoate biosynthesis","type":"exact"},{"name":"sophorosyloxydocosanoate formation","type":"exact"},{"name":"sophorosyloxydocosanoate synthesis","type":"exact"}],"termid":"GO:0019435"}


id: GO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17875938"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035949)","synonyms":[{"name":"positive regulation of gluconeogenesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of gluconeogenesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of glucose biosynthetic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035949"}


id: PBO:0047377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 8","termid":"PBO:0047377"}


id: PBO:0052896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-7","termid":"PBO:0052896"}


id: MOD:00013
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-aspartic acid.","definition_xrefs":["ChEBI:29958","PubMed:339692","DeltaMass:0","PubMed:4399050","PubMed:1097438","PubMed:9521123","PubMed:9582379","PubMed:5764436","PubMed:8089117","RESID:AA0004","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid residue","synonyms":[{"name":"(2S)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"Asp","type":"exact"},{"name":"L-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:00013"}


id: PBO:0057223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 379","termid":"PBO:0057223"}


id: PBO:0068769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 6, pseudogene","termid":"PBO:0068769"}


id: PBO:0077694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 2","termid":"PBO:0077694"}


id: PR:O13825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immediate early response 3-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15858:SF0","OMA:SCHPO01030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.09","secondary_identifiers":["UniProtKB:O13825"],"synonyms":[{"name":"Spom972h-IER3IP1","type":"exact"}],"termid":"PR:O13825"}


id: FYPO:0006629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane","synonyms":[{"name":"normal 1-phosphatidyl-1D-myo-inositol 4-phosphate level in plasma membrane","type":"exact"},{"name":"normal phosphatidylinositol-4-phosphate level in cell membrane","type":"exact"},{"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal phosphatidylinositol-4-phosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"normal plasma membrane PI(5)P level","type":"exact"},{"name":"normal plasma membrane phosphatidylinositol-4-phosphate level","type":"exact"}],"termid":"FYPO:0006629"}


id: PBO:0088330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi multispanning membrane VanZ-like family protein","termid":"PBO:0088330"}


id: PBO:0108518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L histone deacetylase subunit, Sds3-like family protein Dep1","termid":"PBO:0108518"}


id: GO:0140891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional small regulatory non-coding RNA derived from a tRNA.","definition_xrefs":["PMID:29120263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA-derived regulatory ncRNA processing","synonyms":[{"name":"tRNA-derived small RNA processing","type":"related"}],"termid":"GO:0140891"}


id: PR:Q9URZ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cat1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.11","synonyms":[{"name":"Spom972h-cat1","type":"exact"}],"termid":"PR:Q9URZ4"}


id: GO:0033434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"AUC codon-amino acid adaptor activity","synonyms":[{"name":"ATC codon-amino acid adaptor activity","type":"exact"},{"name":"isoleucine tRNA","type":"related"}],"termid":"GO:0033434"}


id: PBO:0059673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 39","termid":"PBO:0059673"}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: PBO:0071389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 12","termid":"PBO:0071389"}


id: MOD:01203
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[(pyrid-3-yl)acetyl]lysine.","definition_xrefs":["Unimod:25#K","PubMed:9276974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridylacetylated residue","termid":"MOD:00418"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(pyridylacetyl)lysine","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:01203"}


id: GO:0103020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-D-xylulose + ATP = H+ + 1-deoxy-D-xylulose 5-phosphate + ADP.","definition_xrefs":["PMID:16920870","PMID:11168365","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-deoxy-D-xylulose kinase activity","secondary_identifiers":["RHEA:27990","MetaCyc:RXN0-382"],"termid":"GO:0103020"}


id: GO:0018779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity (obsolete GO:0018779)","synonyms":[{"name":"2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity","type":"exact"}],"termid":"GO:0018779"}


id: PBO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 40","termid":"PBO:0050130"}


id: MOD:00813
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an threonine residue to an O-fucosylthreonine.","definition_xrefs":["PubMed:11344537","PubMed:11857757","PubMed:1740125","PubMed:1900431","RESID:AA0405","PubMed:15189151","Unimod:295#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"fucosylated","termid":"MOD:00614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-fucosyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(6-deoxy-alpha-D-galactopyranosyloxy)butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Fuc) threonine","type":"exact"},{"name":"CARBOHYD O-linked (dHex)","type":"exact"},{"name":"Fucose","type":"related"},{"name":"O-fucosyl-L-threonine","type":"exact"},{"name":"O-glycosylthreonine","type":"exact"},{"name":"O3-fucosylthreonine","type":"exact"},{"name":"OFucThr","type":"exact"},{"name":"dHex","type":"related"}],"termid":"MOD:00813"}


id: PBO:0090147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan endo-1,3-alpha-glucosidase Agn1","termid":"PBO:0090147"}


id: FYPO:0002406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, contains one or more septa, and is curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"viable curved stubby vegetative cell","termid":"FYPO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"viable curved stubby septated vegetative cell","synonyms":[{"name":"curved stubby septated viable cell","type":"exact"},{"name":"viable curved stubby septated cell during vegetative growth","type":"exact"},{"name":"viable curved stubby septated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable curved watermelon-shaped septated vegetative cell","type":"exact"}],"termid":"FYPO:0002406"}


id: PR:Q9USH9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized ABC transporter ATP-binding protein YjjK that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C825.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.01","secondary_identifiers":["UniProtKB:Q9USH9"],"synonyms":[{"name":"Spom972h-yjjK","type":"exact"}],"termid":"PR:Q9USH9"}


id: GO:0060459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a left lung from an initial condition to its mature state. This process begins with the formation of the left lung and ends with the mature structure. The left lung is the lung which is on the left side of the anterior posterior axis looking from a dorsal to ventral aspect.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left lung development","synonyms":[{"name":"left pulmonary development","type":"exact"}],"termid":"GO:0060459"}


id: PBO:0110044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP3 pseudogene 1","termid":"PBO:0110044"}


id: RO:HOM0000065
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that is characterized by interchangeability in function.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_functional_equivalence_relationship_with","synonyms":[{"name":"functional similarity","type":"related"}],"termid":"RO:HOM0000065"}


id: GO:0032671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-27 production","secondary_identifiers":["GO:0045531"],"synonyms":[{"name":"regulation of IL-27 production","type":"exact"},{"name":"regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-27 formation","type":"narrow"},{"name":"regulation of interleukin-27 synthesis","type":"narrow"}],"termid":"GO:0032671"}


id: PBO:0068822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 60, pseudogene","termid":"PBO:0068822"}


id: PBO:0065421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB7 pseudogene 1","termid":"PBO:0065421"}


id: PBO:0074563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 17","termid":"PBO:0074563"}


id: GO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the thylakoid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of thylakoid membrane (obsolete GO:0031361)","synonyms":[{"name":"integral to thylakoid membrane","type":"narrow"}],"termid":"GO:0031361"}


id: GO:0045984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"down regulation of pyrimidine base metabolic process","type":"exact"},{"name":"down-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"downregulation of pyrimidine base metabolic process","type":"exact"},{"name":"inhibition of pyrimidine base metabolic process","type":"narrow"},{"name":"negative regulation of pyrimidine base metabolic process","type":"exact"},{"name":"negative regulation of pyrimidine base metabolism","type":"exact"}],"termid":"GO:0045984"}


id: GO:0031857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid hormone receptor binding","termid":"GO:0031856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 parathyroid hormone receptor binding","synonyms":[{"name":"type 1 parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031857"}


id: GO:0035707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T-helper 2 cell in response to an external stimulus.","definition_xrefs":["CL:0000546","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell chemotaxis","synonyms":[{"name":"Th2 cell chemotaxis","type":"exact"}],"termid":"GO:0035707"}


id: PBO:0080597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 27","termid":"PBO:0080597"}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: PBO:0062335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 74","termid":"PBO:0062335"}


id: SO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' splice site which does not have the sequence \\\"GT\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"five_prime_cis_splice_site","termid":"SO:0000163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_five_prime_splice_site","synonyms":[{"name":"non canonical 5' splice site","type":"exact"},{"name":"non canonical five prime splice site","type":"exact"},{"name":"non-canonical five prime splice site","type":"exact"}],"termid":"SO:0000679"}


id: FYPO:0005328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal error-free translesion synthesis","termid":"FYPO:0005325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"normal error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"}],"termid":"FYPO:0005328"}


id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["PMID:20505341","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: PBO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 2","termid":"PBO:0048719"}


id: PBO:0053013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3","termid":"PBO:0053013"}


id: GO:0032784
data:
  {"annotated_genes":["SJAG_02057","SJAG_00150","SJAG_03061","SJAG_01707","SJAG_02551","SJAG_01151","SJAG_03967","SJAG_01213","SJAG_01149","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[107098,105058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[102211,91988,113150,105220,99232,101533,111458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01707":null,"SJAG_02057":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"regulation of DNA-templated transcription elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"regulation of DNA-templated transcription, elongation","type":"exact"},{"name":"regulation of RNA elongation","type":"broad"},{"name":"regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"regulation of transcriptional elongation","type":"broad"},{"name":"transcription elongation regulator activity","type":"related"}],"termid":"GO:0032784","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0034244":null}}


id: FYPO:0005352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore mitosis","type":"exact"},{"name":"normal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"normal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005352"}


id: PBO:0091305
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative mRNA processing","termid":"PBO:0091305"}


id: GO:1904529
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91469,101315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament binding.","definition_xrefs":["PMID:24520051","GOC:TermGenie","GOC:als","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin binding","termid":"GO:1904616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of F-actin binding","type":"exact"},{"name":"regulation of actin cross-linking activity","type":"related"}],"termid":"GO:1904529","terms_by_termid":{"GO:1904530":null}}


id: GO:0034469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by any of the membranes of the thin, flattened cisternae that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi lumen","termid":"GO:0005796"},{"relation_name":"part_of","term_name":"Golgi stack","termid":"GO:0005795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Golgi stack lumen","termid":"GO:0034469"}


id: PBO:0077419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 156","termid":"PBO:0077419"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: PBO:0041711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 3","termid":"PBO:0041711"}


id: PBO:0036440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex (derlin) Der1 (predicted)","termid":"PBO:0036440"}


id: GO:0036189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-diene + NADPH + H+ + O2 = abieta-7,13-dien-18-ol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"abieta-7,13-diene hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-8507","RHEA:26217","KEGG_REACTION:R06351"],"synonyms":[{"name":"abietadiene hydroxylase","type":"broad"}],"termid":"GO:0036189"}


id: PBO:0030826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_lithium_ion","termid":"PBO:0030826"}


id: GO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of ecdysiostatic hormone, a peptide hormone that inhibits ecdysone secretion.","definition_xrefs":["DOI:10.1002/(SICI)1520-6327(1997)35:1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0140677","GO:0005515","GO:0003674","GO:0098772","GO:0005488"],"is_obsolete":false,"name":"ecdysiostatic hormone activity","termid":"GO:0016087"}


id: PBO:0075446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 1","termid":"PBO:0075446"}


id: PBO:0040662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS7 divergent transcript","termid":"PBO:0040662"}


id: GO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinomycetes and glutathione in many species.","definition_xrefs":["PMID:20308541","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"bacillithiol metabolic process","termid":"GO:0071792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"bacillithiol biosynthetic process","synonyms":[{"name":"bacillithiol anabolism","type":"exact"},{"name":"bacillithiol biosynthesis","type":"exact"},{"name":"bacillithiol formation","type":"exact"},{"name":"bacillithiol synthesis","type":"exact"}],"termid":"GO:0071793"}


id: PBO:0043161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector a","termid":"PBO:0043161"}


id: FYPO:0007482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the first meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007482"}


id: PBO:0082125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid trehalase required for utilization of extracellular trehalose; involved in intracellular trehalose degradation during growth recovery after saline stress","termid":"PBO:0082125"}


id: PBO:0080495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor C and EGF domains","termid":"PBO:0080495"}


id: PBO:0091342
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human BCL2","termid":"PBO:0091342"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: FYPO:0007805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the ATP hydrolysis-dependent activity that loads H3-H4 histone dimers onto DNA is absent.","definition_xrefs":["PMID:31848341","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal H3-H4 dimer loading onto DNA","termid":"FYPO:0007804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000641","FYPO:0000707","FYPO:0000002","FYPO:0001985","FYPO:0000654","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"abolished H3-H4 dimer loading onto DNA","synonyms":[{"name":"abolished H3-H4 dimer loading activity","type":"exact"},{"name":"abolished histone H3-H4 dimer loading activity","type":"exact"}],"termid":"FYPO:0007805"}


id: PBO:0055030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2445","termid":"PBO:0055030"}


id: PATO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000857 lordosis reflex value (obsolete PATO:0000857)","termid":"PATO:0000857"}


id: PBO:0069804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1090, pseudogene","termid":"PBO:0069804"}


id: PR:Q10497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26F1.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.11","synonyms":[{"name":"Spom972h-SPAC26F1.11","type":"exact"}],"termid":"PR:Q10497"}


id: PBO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein","termid":"PBO:0004278"}


id: FYPO:0004984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the central core of the centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at centromere central core","synonyms":[{"name":"reduced chromatin binding at centromere central core","type":"exact"}],"termid":"FYPO:0004984"}


id: MOD:01772
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The palmityl cation protein modification reporter fragment produced by fragmentation of some palmitoyl modified residues.","definition_xrefs":["PubMed:8413602","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmityl reporter fragment","synonyms":[{"name":"Pam+","type":"exact"},{"name":"palmityl cation","type":"related"}],"termid":"MOD:01772"}


id: GO:0034838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-(2S,5R)-menthone + NAD+ = (5R)-menth-2-enone + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"menthone dehydrogenase activity","termid":"GO:0034838"}


id: GO:0015085
data:
  {"annotated_genes":["SJAG_04096","SJAG_03895","SJAG_02019","SJAG_02877","SJAG_01090","SJAG_02322","SJAG_05229","SJAG_04668","SJAG_04028","SJAG_04698","SJAG_01400","SJAG_03850","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92166,105560],"is_not":false,"summary":null,"term":"GO:0015085"},{"annotations":[91869,95794,88591,110608,88532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[86905,94505,87389,111718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[95795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[97802,104855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[88592,110110,88533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transfer of calcium (Ca) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf","RHEA:29671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03850":null,"SJAG_03895":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"calcium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-144","Reactome:R-HSA-2534359"],"termid":"GO:0015085","terms_by_termid":{"GO:0005262":null,"GO:0005388":null,"GO:0008331":null,"GO:0015085":null,"GO:0015275":null,"GO:0015369":null}}


id: PBO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2","termid":"PBO:0090226"}


id: GO:0070373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["ISBN:0896039986","GOC:add","ISBN:0121245462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK1 and ERK2 cascade","termid":"GO:0070372"},{"relation_name":"negatively_regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"down regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"down-regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"downregulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"inhibition of ERK1 and ERK2 cascade","type":"narrow"},{"name":"negative regulation of ERK cascade","type":"broad"},{"name":"negative regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"negative regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"negative regulation of ERK1 cascade","type":"narrow"},{"name":"negative regulation of ERK1/2 cascade","type":"exact"},{"name":"negative regulation of ERK2 cascade","type":"narrow"},{"name":"negative regulation of MAPK1 cascade","type":"narrow"},{"name":"negative regulation of MAPK3 cascade","type":"narrow"}],"termid":"GO:0070373"}


id: PBO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNO divergent transcript","termid":"PBO:0042217"}


id: GO:1903860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendrite extension.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:pad","PMID:24898855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of dendrite extension","termid":"GO:1903859"},{"relation_name":"negatively_regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendrite extension","synonyms":[{"name":"down regulation of dendrite extension","type":"exact"},{"name":"down-regulation of dendrite extension","type":"exact"},{"name":"downregulation of dendrite extension","type":"exact"},{"name":"inhibition of dendrite extension","type":"narrow"},{"name":"up regulation of dendrite retraction","type":"exact"},{"name":"up-regulation of dendrite retraction","type":"exact"}],"termid":"GO:1903860"}


id: GO:0051918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of fibrinolysis","termid":"GO:0051917"},{"relation_name":"negatively_regulates","term_name":"fibrinolysis","termid":"GO:0042730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibrinolysis","synonyms":[{"name":"down regulation of fibrinolysis","type":"exact"},{"name":"down-regulation of fibrinolysis","type":"exact"},{"name":"downregulation of fibrinolysis","type":"exact"},{"name":"inhibition of fibrinolysis","type":"narrow"}],"termid":"GO:0051918"}


id: PBO:0079544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 6","termid":"PBO:0079544"}


id: MOD:01179
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N,N-dimethyl-L-alanine.","definition_xrefs":["PubMed:17691833","RESID:AA0433","PubMed:387091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-alanine","synonyms":[{"name":"(S)-1-carboxy-N,N-dimethylaminoethane","type":"exact"},{"name":"(S)-2-(dimethylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylalanine","type":"exact"},{"name":"N,N-dimethyl-L-alanine","type":"exact"},{"name":"N,N-dimethylalanine","type":"exact"},{"name":"NMe2Ala","type":"exact"}],"termid":"MOD:01179"}


id: CHEBI:26710
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An inorganic chloride salt having sodium(1+) as the counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium chloride","termid":"CHEBI:26710"}


id: GO:1904242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12771515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"regulation of pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1904242"}


id: GO:0072384
data:
  {"annotated_genes":["SJAG_03673","SJAG_04597","SJAG_03073","SJAG_04143","SJAG_01863","SJAG_01662","SJAG_02045","SJAG_02286","SJAG_00397","SJAG_00594","SJAG_02737","SJAG_02561","SJAG_02431","SJAG_00140","SJAG_04001","SJAG_05185","SJAG_01370","SJAG_01613","SJAG_00368","SJAG_00113"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113098,93753,99140,91386,97594,107402,83993,88020,107233,107580,87189,110131,87568,96891,99432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[107404,102763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"},{"annotations":[93829,95399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[87570,95400,91388,83997,93755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90592],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[100713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"organelle transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based organelle localization","type":"exact"}],"termid":"GO:0072384","terms_by_termid":{"GO:0000743":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:1902854":null,"GO:1903563":null}}


id: PBO:0002939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme synthase (predicted)","termid":"PBO:0002939"}


id: GO:0014721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The twitch skeletal muscle responds to neurostimulations with a contraction followed by a relaxation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"twitch skeletal muscle contraction","termid":"GO:0014721"}


id: FYPO:0002713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of DNA recombination is decreased at the mating type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased DNA recombination at mating type locus","synonyms":[{"name":"decreased DNA recombination frequency at mating type locus","type":"exact"},{"name":"decreased DNA recombination rate at mating type locus","type":"related"},{"name":"decreased recombination at mating type locus","type":"exact"},{"name":"reduced DNA recombination at mating type locus","type":"exact"}],"termid":"FYPO:0002713"}


id: PBO:0015249
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with non-coding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015249"}


id: PR:O42934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromo domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.10","synonyms":[{"name":"Spom972h-chp2","type":"exact"}],"termid":"PR:O42934"}


id: POMBASE_GENE_EX_REL_INTERNAL:modified_residue
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"For internal PomBase use: modified residue position","definition_xrefs":["PomBase:kmr"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_residue","termid":"POMBASE_GENE_EX_REL_INTERNAL:modified_residue"}


id: GO:0061573
data:
  {"annotated_genes":["SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112345],"is_not":false,"summary":null,"term":"GO:0061573"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that results in the arrangement of actin filament bundles from the periphery toward the interior of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle distribution","termid":"GO:0070650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin filament bundle retrograde transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament cable retrograde transport","type":"related"}],"termid":"GO:0061573","terms_by_termid":{"GO:0061573":null}}


id: PBO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt4","termid":"PBO:0002770"}


id: GO:0019140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myo-inositol = ADP + 1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"inositol 3-kinase activity","secondary_identifiers":["RHEA:21804","MetaCyc:MYO-INOSITOL-1-KINASE-RXN"],"synonyms":[{"name":"ATP:myo-inositol 1-phosphotransferase activity","type":"related"},{"name":"inositol 1-kinase activity","type":"related"},{"name":"inositol-1-kinase (phosphorylating)","type":"related"},{"name":"myo-inositol 1-kinase activity","type":"related"},{"name":"myo-inositol 3-kinase activity","type":"exact"},{"name":"myoinositol kinase activity","type":"broad"}],"termid":"GO:0019140"}


id: GO:0090534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calcium ion-transporting ATPase complex","termid":"GO:0090534"}


id: PBO:0075042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-5","termid":"PBO:0075042"}


id: PR:Q9Y7X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose 4-epimerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03313","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase uge1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.14c","secondary_identifiers":["UniProtKB:Q9Y7X5"],"synonyms":[{"name":"Galactowaldenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GALE","type":"exact"}],"termid":"PR:Q9Y7X5"}


id: GO:1902020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:TermGenie","GOC:jl","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cilium-dependent cell motility","synonyms":[{"name":"down regulation of ciliary cell motility","type":"exact"},{"name":"down-regulation of ciliary cell motility","type":"exact"},{"name":"downregulation of ciliary cell motility","type":"exact"},{"name":"inhibition of ciliary cell motility","type":"narrow"},{"name":"negative regulation of ciliary cell motility","type":"related"},{"name":"negative regulation of cilium cell motility","type":"exact"}],"termid":"GO:1902020"}


id: MOD:00949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01933. Remap to MOD:01933.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00949 desmosine (obsolete MOD:00949)","termid":"MOD:00949"}


id: GO:0006490
data:
  {"annotated_genes":["SJAG_00437","SJAG_00924","SJAG_01950","SJAG_03056","SJAG_02903","SJAG_03774","SJAG_03311","SJAG_04770","SJAG_04952","SJAG_00394","SJAG_02102","SJAG_00334","SJAG_04821","SJAG_04954","SJAG_03656","SJAG_03764","SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105477],"is_not":false,"summary":null,"term":"GO:0006490"},{"annotations":[96151,94519,87316,86581,94572,96168,105476,101167,83736,90082,92602,107266,112901,98468,99746,94854,108737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an oligosaccharide-lipid intermediate, such as a molecule of dolichol-P-man or dolicol-P-Glc used in N-linked glycosylation.","definition_xrefs":["GOC:rb","GOC:isa_complete","GOC:dph","GOC:pr","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"oligosaccharide-lipid intermediate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oligosaccharide-lipid intermediate assembly","type":"narrow"}],"termid":"GO:0006490","terms_by_termid":{"GO:0006488":null,"GO:0006490":null}}


id: MOD:01574
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01574"}


id: GO:0038128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB2 on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription. ERBB2 receptors are themselves unable to bind to ligands, but act as a signal-amplifying tyrosine kinase within a heterodimeric pair.","definition_xrefs":["GOC:jc","PMID:16460914","Reactome:R-HSA-1227986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB2 signaling pathway","synonyms":[{"name":"ERBB2 signalling pathway","type":"exact"},{"name":"HER2 signaling pathway","type":"exact"},{"name":"NEU signaling","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-2 signaling pathway","type":"exact"}],"termid":"GO:0038128"}


id: GO:0050006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose = 6-O-alpha-D-glucopyranosyl-D-fructofuranose.","definition_xrefs":["EC:5.4.99.11","MetaCyc:ISOMALTULOSE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"isomaltulose synthase activity","secondary_identifiers":["RHEA:24032"],"synonyms":[{"name":"isomaltulose synthetase activity","type":"related"},{"name":"sucrose alpha-glucosyltransferase activity","type":"related"},{"name":"sucrose glucosylmutase activity","type":"related"},{"name":"trehalulose synthase activity","type":"related"}],"termid":"GO:0050006"}


id: GO:0016237
data:
  {"annotated_genes":["SJAG_01283","SJAG_04655","SJAG_05017","SJAG_04502","SJAG_01135","SJAG_06309","SJAG_01080","SJAG_00355","SJAG_02100","SJAG_04232","SJAG_01722","SJAG_01382","SJAG_03718","SJAG_03851","SJAG_00645","SJAG_01274","SJAG_03100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110684],"is_not":false,"summary":null,"term":"GO:0016237"},{"annotations":[104388,96141,104836,84071,107872,86293,71690,112387,113947,95862,94054,100999,87799,90107,90424,99766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"A type of autophagy where cytosolic components are ingested by late endosomes, lysosomes or yeast-type lytic vacuoles by direct invagination of the compartment membrane without prior sequestration into an autophagosome. The engulfing membranes fuse, resulting in the lysosomal delivery of the cargo wrapped in a single membrane derived from the invaginated lysosomal membrane.","definition_xrefs":["PMID:9566964","PMID:15798367","PMID:16973210","PMID:14679207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00645":null,"SJAG_01080":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01722":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"microautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"lysosomal microautophagy","type":"broad"}],"termid":"GO:0016237","terms_by_termid":{"GO:0016237":null,"GO:0034727":null}}


id: SO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uORF beginning with the canonical start codon AUG.","definition_xrefs":["PMID:27313038","PMID:26684391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uORF","termid":"SO:0002027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUG_initiated_uORF","synonyms":[{"name":"AUG initiated uORF","type":"exact"}],"termid":"SO:0002150"}


id: GO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a B cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"},{"relation_name":"is_a","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"B cell cytokine production","synonyms":[{"name":"B lymphocyte cytokine production","type":"exact"},{"name":"B-cell cytokine production","type":"exact"},{"name":"B-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002368"}


id: GO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-16 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-16 receptor activity","synonyms":[{"name":"IL-16 receptor activity","type":"exact"},{"name":"IL-16R","type":"exact"}],"termid":"GO:0042012"}


id: PBO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein","termid":"PBO:0004023"}


id: PBO:0090891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex subunit Red1","termid":"PBO:0090891"}


id: GO:0061264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell fate commitment","termid":"GO:0061264"}


id: GO:0070759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"negatively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070759"}


id: PBO:0043238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel Kb","termid":"PBO:0043238"}


id: PBO:0017738
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(6)","termid":"PBO:0017738"}


id: PBO:0078514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 7","termid":"PBO:0078514"}


id: GO:0102067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-3,7,11,15-tetramethylhexadec-2-en-1-yl diphosphate + 3 NADP = 2-trans,6-trans,10-trans-geranylgeranyl diphosphate + 3 NADPH + 3 H+.","definition_xrefs":["EC:1.3.1.83","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geranylgeranyl diphosphate reductase activity","secondary_identifiers":["MetaCyc:RXN-10625","RHEA:26229"],"termid":"GO:0102067"}


id: PBO:0067176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 233, pseudogene","termid":"PBO:0067176"}


id: MOD:00450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this isotopic label from Unimod entry 57 is deprecated","definition_xrefs":["PubMed:11857757"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00450 acetate labeling reagent light form (K) (obsolete MOD:00450)","termid":"MOD:00450"}


id: PATO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light green","termid":"PATO:0001250"}


id: PR:O14450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01436","PANTHER:PTHR21431:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.13","secondary_identifiers":["UniProtKB:O14450"],"synonyms":[{"name":"Spom972h-PFDN6","type":"exact"}],"termid":"PR:O14450"}


id: PBO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 1","termid":"PBO:0052170"}


id: PBO:0072799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 5","termid":"PBO:0072799"}


id: GO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine metabolic process","synonyms":[{"name":"phenylethylamine metabolism","type":"exact"}],"termid":"GO:0042443"}


id: PBO:0042662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 18","termid":"PBO:0042662"}


id: PBO:0071268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 2","termid":"PBO:0071268"}


id: GO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta2 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-9 complex","synonyms":[{"name":"laminin-421 complex","type":"exact"}],"termid":"GO:0043258"}


id: PBO:0043434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 4","termid":"PBO:0043434"}


id: PBO:0067656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 833, pseudogene","termid":"PBO:0067656"}


id: PBO:0066379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIG-I dependent antiviral response regulator RNA","termid":"PBO:0066379"}


id: PR:O94285
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12709:SF2","OMA:SCHPO03339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.07c","secondary_identifiers":["UniProtKB:O94285"],"synonyms":[{"name":"RNA polymerase III subunit C25 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3H","type":"exact"}],"termid":"PR:O94285"}


id: PBO:0082012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 9","termid":"PBO:0082012"}


id: PBO:0057615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1181","termid":"PBO:0057615"}


id: GO:2000311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of AMPA selective glutamate receptor activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of AMPA receptor activity","synonyms":[{"name":"regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity","type":"exact"}],"termid":"GO:2000311"}


id: PBO:0044578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor-like 5 pseudogene 2","termid":"PBO:0044578"}


id: PBO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CaCA proton/calcium exchanger (predicted)","termid":"PBO:0005357"}


id: GO:0032426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A distinct compartment at the tip of a stereocilium, distal to the site of attachment to the apical cell surface. It consists of a dense matrix bridging the barbed ends of the stereocilium actin filaments with the overlying plasma membrane, is dynamic compared to the shaft, and is required for stereocilium elongation.","definition_xrefs":["PMID:17021180","GOC:ecd","PMID:27565685","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium tip","termid":"GO:0032426"}


id: GO:0047779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + citrate + CoA = (3S)-citryl-CoA + ADP + H+ + phosphate.","definition_xrefs":["RHEA:21472","EC:6.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"citrate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R01322","MetaCyc:CITRATE--COA-LIGASE-RXN"],"synonyms":[{"name":"citrate thiokinase activity","type":"related"},{"name":"citrate:CoA ligase (ADP-forming)","type":"related"},{"name":"citrate:CoA ligase activity","type":"related"},{"name":"citryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047779"}


id: PBO:0005336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase","termid":"PBO:0005336"}


id: PBO:0073833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 9","termid":"PBO:0073833"}


id: PBO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen related receptor beta","termid":"PBO:0046671"}


id: GO:0036345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a platelet to attain its fully functional state. A platelet is a non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.","definition_xrefs":["CL:0000233","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet maturation","termid":"GO:0036345"}


id: PBO:0044058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin S","termid":"PBO:0044058"}


id: PBO:0076761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan 2,3-dioxygenase","termid":"PBO:0076761"}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: FYPO:0002335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing","synonyms":[{"name":"normal chromatin silencing during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0002335"}


id: GO:0044048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type V secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type V secretion system (obsolete GO:0044048)","termid":"GO:0044048"}


id: GO:0180002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of zinc ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["PMID:28196538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal zinc excretion","synonyms":[{"name":"renal zinc ion excretion","type":"exact"},{"name":"renal zinc secretion","type":"exact"}],"termid":"GO:0180002"}


id: GO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a protein.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking (obsolete GO:0018142)","synonyms":[{"name":"DNA-protein covalent cross-linking","type":"exact"}],"termid":"GO:0018142"}


id: FYPO:0005127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from late meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of late meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of late meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of late meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005127"}


id: PBO:0061778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occludin/ELL domain containing 1","termid":"PBO:0061778"}


id: GO:0046641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"positively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of alpha-beta T cell proliferation","synonyms":[{"name":"activation of alpha-beta T cell proliferation","type":"narrow"},{"name":"positive regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"positive regulation of alpha-beta T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of alpha-beta T cell proliferation","type":"narrow"},{"name":"up regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"up-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"upregulation of alpha-beta T cell proliferation","type":"exact"}],"termid":"GO:0046641"}


id: PR:O14174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.10c","synonyms":[{"name":"Spom972h-spt20","type":"exact"}],"termid":"PR:O14174"}


id: FYPO:0007691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA strand exchange activator activity","synonyms":[{"name":"normal RecA-family recombinase activator activity","type":"exact"},{"name":"normal positive regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007691"}


id: GO:0032007
data:
  {"annotated_genes":["SJAG_04249","SJAG_04910","SJAG_05346","SJAG_01983","SJAG_00457","SJAG_03072","SJAG_00169","SJAG_00875","SJAG_03089","SJAG_04206","SJAG_03355","SJAG_00289","SJAG_03799","SJAG_00991","SJAG_01142","SJAG_01184","SJAG_00824","SJAG_03486","SJAG_02765","SJAG_03501","SJAG_02231","SJAG_03720","SJAG_00209","SJAG_03678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87448],"is_not":false,"summary":null,"term":"GO:0032007"},{"annotations":[95045,92279,103576,105450,112295,99186,101296,112647,84254,112399,89505,95734,90350,97616,107139,110745,105866,114346,103323,113194,109343,110162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[112438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TOR signaling pathway","type":"exact"},{"name":"down-regulation of TOR signaling pathway","type":"exact"},{"name":"downregulation of TOR signaling pathway","type":"exact"},{"name":"inhibition of TOR signaling pathway","type":"narrow"},{"name":"negative regulation of TOR signaling cascade","type":"related"},{"name":"negative regulation of TOR signaling pathway","type":"exact"},{"name":"negative regulation of TOR signalling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0032007","terms_by_termid":{"GO:0032007":null,"GO:1903940":null,"GO:1904262":null}}


id: PBO:0035967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_checkpoint_complex_level","termid":"PBO:0035967"}


id: PBO:0045881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 5","termid":"PBO:0045881"}


id: PBO:0084329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Key component of the RAM signaling network; required for proper cell morphogenesis and cell separation after mitosis","termid":"PBO:0084329"}


id: PBO:0063815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHLDA1 antisense RNA 1","termid":"PBO:0063815"}


id: GO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to self antigen","synonyms":[{"name":"down regulation of tolerance induction to self antigen","type":"exact"},{"name":"down-regulation of tolerance induction to self antigen","type":"exact"},{"name":"downregulation of tolerance induction to self antigen","type":"exact"},{"name":"inhibition of tolerance induction to self antigen","type":"narrow"}],"termid":"GO:0002650"}


id: PBO:0077106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10","termid":"PBO:0077106"}


id: PBO:0041333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3a receptor 1","termid":"PBO:0041333"}


id: PR:O74991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/TPR repeat protein pof3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.16","synonyms":[{"name":"Spom972h-pof3","type":"exact"}],"termid":"PR:O74991"}


id: PBO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase Dak2","termid":"PBO:0000112"}


id: GO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of dopamine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"dopamine secretion","termid":"GO:0014046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of dopamine secretion","termid":"GO:0014059"}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: GO:1904976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bleomycin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:11553781","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bleomycin","termid":"GO:1904975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bleomycin","termid":"GO:1904976"}


id: GO:0072283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the metanephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}


id: GO:1901781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cumate.","definition_xrefs":["PMID:8631713","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"p-cumate metabolic process","synonyms":[{"name":"p-cumate metabolism","type":"exact"}],"termid":"GO:1901781"}


id: PBO:0003240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon alpha subunit Sec61","termid":"PBO:0003240"}


id: PBO:0049568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 5","termid":"PBO:0049568"}


id: GO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a section of DNA from a larger DNA molecule by the making of dual incisions that flank the section to be excised.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA excision","termid":"GO:0044349"}


id: PBO:0039253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member B1","termid":"PBO:0039253"}


id: PBO:0089741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage ubiquitin-protein ligase E3 Mpe1","termid":"PBO:0089741"}


id: PBO:0028673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport","termid":"PBO:0028673"}


id: GO:1900363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","GOC:TermGenie","PMID:15121841"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA polyadenylation (obsolete GO:1900363)","synonyms":[{"name":"regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900363"}


