# terms

id: GO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll protein, a transmembrane receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Toll binding","synonyms":[{"name":"Tl binding","type":"exact"},{"name":"Toll ligand","type":"narrow"},{"name":"Toll receptor binding","type":"exact"}],"termid":"GO:0005121"}


id: PBO:0011405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_complex,_cellular_component,_biological_process,_molecular_function,_modification_or_sequence_feature","termid":"PBO:0011405"}


id: PBO:0048956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 7","termid":"PBO:0048956"}


id: PBO:0017537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae STE7","termid":"PBO:0017537"}


id: GO:0030112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A carbohydrate rich layer at the outermost periphery of a cell.","definition_xrefs":["PMID:28876829","ISBN:0815316208","GOC:krc","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glycocalyx","secondary_identifiers":["Wikipedia:Glycocalyx"],"termid":"GO:0030112"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: PBO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0000539"}


id: PBO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 179","termid":"PBO:0042106"}


id: PBO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX domain protein","termid":"PBO:0001542"}


id: GO:0043622
data:
  {"annotated_genes":["SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103680],"is_not":false,"summary":null,"term":"GO:0043622"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"},{"relation_name":"is_a","term_name":"cytoplasmic microtubule organization","termid":"GO:0031122"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cortical microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cortical microtubule cytoskeleton organization","type":"exact"},{"name":"cortical microtubule organisation","type":"exact"},{"name":"cortical microtubule organization and biogenesis","type":"related"}],"termid":"GO:0043622","terms_by_termid":{"GO:0043622":null}}


id: GO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome in which the prosthetic group is a tetrapyrrolic chelate of iron in which the degree of conjugation of double bonds is less than in porphyrin. This definition would appear to include siroheme proteins (e.g. nitrite and sulfite reductases), but these are not cytochromes.","definition_xrefs":["GOC:kd","PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome d (obsolete GO:0009462)","synonyms":[{"name":"cytochrome d","type":"exact"}],"termid":"GO:0009462"}


id: PBO:0064217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB2 antisense RNA 1","termid":"PBO:0064217"}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: PR:Q10427
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A maltodextrin glucosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04696","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized glycosyl hydrolase C11E10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.09c","secondary_identifiers":["UniProtKB:Q10427"],"synonyms":[{"name":"Spom972h-malZ","type":"exact"}],"termid":"PR:Q10427"}


id: GO:0097177
data:
  {"annotated_genes":["SJAG_02856","SJAG_04635","SJAG_04351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88170,98801,101761],"is_not":false,"summary":null,"term":"GO:0097177"}]},"cv_name":"molecular_function","definition":"Binding to a mitochondrial ribosome.","definition_xrefs":["GOC:ans","PMID:20739282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02856":null,"SJAG_04351":null,"SJAG_04635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mitochondrial ribosome binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097177","terms_by_termid":{"GO:0097177":null}}


id: PBO:0039471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18A","termid":"PBO:0039471"}


id: GO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylguanosine 5'-triphospho-5'-polynucleotide + H2O = 7-methylguanosine 5'-phosphate + polynucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activity (obsolete GO:0050072)","synonyms":[{"name":"M(7)G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:0050072"}


id: GO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acute inflammatory response","termid":"GO:0002673"}


id: PBO:0110842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lactate dehydrogenase regulator","termid":"PBO:0110842"}


id: GO:0019331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of ammonium (NH4) to nitrogen (N2) in the absence of oxygen, using nitrite (NO2) as the electron acceptor. It is suggested that hydroxylamine and ammonium are combined to yield hydrazine, which is subsequently oxidized to N2.","definition_xrefs":["MetaCyc:P303-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"anaerobic respiration, using ammonium as electron donor","secondary_identifiers":["Wikipedia:Anammox"],"synonyms":[{"name":"anaerobic ammonium oxidation","type":"broad"},{"name":"anammox","type":"exact"}],"termid":"GO:0019331"}


id: PBO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone_at_normal_pheromone_level_(obsolete_FYPO:0000987)","termid":"PBO:0030750"}


id: FYPO:0007365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphoenolpyruvate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphoenolpyruvate level","synonyms":[{"name":"decreased cellular PEP level","type":"exact"},{"name":"decreased cellular phosphoenolpyruvate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphoenolpyruvate level during vegetative growth","type":"exact"},{"name":"decreased level of phosphoenolpyruvate in cell","type":"exact"},{"name":"reduced cellular phosphoenolpyruvate level","type":"exact"}],"termid":"FYPO:0007365"}


id: PATO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001073 relative impulse (obsolete PATO:0001073)","termid":"PATO:0001073"}


id: GO:0005366
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88755,94226],"is_not":false,"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: myo-inositol(out) + H+(out) = myo-inositol(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol transmembrane transporter activity","termid":"GO:0005365"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"myo-inositol:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429101","RHEA:60364"],"synonyms":[{"name":"hydrogen/myo-inositol transporter activity","type":"broad"},{"name":"myo-inositol:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005366","terms_by_termid":{"GO:0005366":null}}


id: GO:1905643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA methylation.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:27336847","GO_REF:0000058","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA methylation (obsolete GO:1905643)","synonyms":[{"name":"activation of DNA methylation","type":"narrow"},{"name":"up regulation of DNA methylation","type":"exact"},{"name":"up-regulation of DNA methylation","type":"exact"},{"name":"upregulation of DNA methylation","type":"exact"}],"termid":"GO:1905643"}


id: PBO:0090149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Nab2","termid":"PBO:0090149"}


id: SO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which decreases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_translational_product_level","synonyms":[{"name":"decrease translational product level","type":"exact"}],"termid":"SO:0001555"}


id: PBO:0044639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 1B","termid":"PBO:0044639"}


id: GO:0016544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect taps the female with his frontal leg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, tapping to detect pheromone","synonyms":[{"name":"male courtship behavior, tapping","type":"related"},{"name":"male courtship behaviour, tapping","type":"exact"},{"name":"male courtship behaviour, tapping to detect pheromone","type":"related"}],"termid":"GO:0016544"}


id: MOD:00563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminogalactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated","termid":"MOD:00734"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylaminogalactosylated residue","synonyms":[{"name":"GalNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00563"}


id: PBO:0111438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger Vcx1","termid":"PBO:0111438"}


id: GO:2001282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of a muscle cell towards a tendon cell in response to an external stimulus. For example, when the muscle cell arrives at the target tendon cell, migration is arrested so that attachments can be made between the cells.","definition_xrefs":["PMID:19793885","PMID:20404543","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of muscle cell chemotaxis toward tendon cell","termid":"GO:2001281"},{"relation_name":"negatively_regulates","term_name":"muscle cell chemotaxis toward tendon cell","termid":"GO:0036061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"arrest of muscle cell chemotaxis","type":"narrow"},{"name":"negative regulation of muscle cell attraction","type":"related"},{"name":"negative regulation of muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:2001282"}


id: PBO:0082660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT transcriptional complex; evolutionarily conserved; involved in controlling mRNA initiation, elongation, and degradation; binds Cdc39p","termid":"PBO:0082660"}


id: PR:Q10178-3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-3.","definition_xrefs":["PRO:DNx","UniProtKB:Q10178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.03c","secondary_identifiers":["UniProtKB:Q10178-3"],"synonyms":[{"name":"Spom972h-SF3B1/iso:E","type":"exact"}],"termid":"PR:Q10178-3"}


id: GO:0051906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a pigment granule is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of vesicle location","termid":"GO:0051655"},{"relation_name":"part_of","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of pigment granule location","synonyms":[{"name":"maintenance of pigment granule localization","type":"related"}],"termid":"GO:0051906"}


id: FYPO:0007053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to zinc ion starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to zinc ion starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"decreased protein level during cellular response to zinc ion depletion","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion deprivation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion limitation","type":"exact"},{"name":"decreased protein level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during cellular response to zinc starvation","type":"exact"},{"name":"reduced protein level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0007053"}


id: PBO:0111779
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain","termid":"PBO:0111779"}


id: GO:0099086
data:
  {"annotated_genes":["SJAG_04303","SJAG_05333","SJAG_00172","SJAG_03843","SJAG_03438","SJAG_02490","SJAG_07002","SJAG_02652","SJAG_04748"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86541,101039,107303,85271,87652,111689,90921,105838,105741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030998"}]},"cv_name":"cellular_component","definition":"A proteinaceous scaffold found between homologous chromosomes during meiosis.","definition_xrefs":["GOC:elh","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00172":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_03438":null,"SJAG_03843":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_05333":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"synaptonemal structure","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099086","terms_by_termid":{"GO:0030998":null}}


id: GO:0017025
data:
  {"annotated_genes":["SJAG_00650","SJAG_02458","SJAG_03900","SJAG_03095","SJAG_00692","SJAG_01523","SJAG_03120","SJAG_02174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57831,65826,69597,69657,70907,74615,75913,76220],"is_not":false,"summary":null,"term":"GO:0017025"}]},"cv_name":"molecular_function","definition":"Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs).","definition_xrefs":["PMID:16858867","GOC:jl","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"TBP-class protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TATA-binding protein binding","type":"narrow"},{"name":"TBP binding","type":"narrow"},{"name":"TBP-related factor (TRF) protein binding","type":"narrow"}],"termid":"GO:0017025","terms_by_termid":{"GO:0017025":null}}


id: GO:0021769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the orbitofrontal cortex over time from its initial formation until its mature state. The orbitofrontal cortex is a cerebral cortex region located in the frontal lobe.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0878937420","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"orbitofrontal cortex development","termid":"GO:0021769"}


id: PR:000037085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 homodimer (Schizosaccharomyces pombe) that is compose of two subunits of the non-acetylated form of tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","termid":"PR:000037083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer, non-acetylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8/AcRes-)*2","type":"exact"}],"termid":"PR:000037085"}


id: PR:Q9P3U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.06c","synonyms":[{"name":"Spom972h-ght8","type":"exact"},{"name":"hexose transporter 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U7"}


id: GO:0055130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-alanine, the D-enantiomer of the amino acid alanine.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine catabolic process","termid":"GO:0006524"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-alanine metabolic process","termid":"GO:0046436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"D-alanine catabolic process","synonyms":[{"name":"(2R)-2-aminopropanoic acid catabolic process","type":"exact"}],"termid":"GO:0055130"}


id: GO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of male sex and sexual phenotypes in the hermaphroditic nematode soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"masculinization of hermaphrodite soma","termid":"GO:0042003"}


id: FYECO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Pantothenate was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate absent","termid":"FYECO:0000187"}


id: GO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction by changing the calcium ion signals that trigger contraction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction by calcium ion signaling","synonyms":[{"name":"regulation of cardiac muscle contraction by calcium ion signalling","type":"exact"}],"termid":"GO:0010882"}


id: GO:0009145
data:
  {"annotated_genes":["SJAG_00885","SJAG_MIT15","SJAG_04122","SJAG_04422","SJAG_02887","SJAG_01298","SJAG_05204","SJAG_02564","SJAG_00985","SJAG_04849","SJAG_00836","SJAG_00542","SJAG_02105","SJAG_00438","SJAG_03114","SJAG_07003","SJAG_00133","SJAG_MIT09","SJAG_01471","SJAG_00915","SJAG_03925","SJAG_MIT37","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104453,96233,98407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[99859,115181,91018,99830,85342,104081,99210,104971,90053,89455,101171,115172,112006,103991,97984,115177,89032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[103438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[114131],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside triphosphate anabolism","type":"exact"},{"name":"purine nucleoside triphosphate biosynthesis","type":"exact"},{"name":"purine nucleoside triphosphate formation","type":"exact"},{"name":"purine nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009145","terms_by_termid":{"GO:0006183":null,"GO:0009216":null,"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: PBO:0073188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein S","termid":"PBO:0073188"}


id: PBO:0054331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1724","termid":"PBO:0054331"}


id: PBO:0076970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 1","termid":"PBO:0076970"}


id: PBO:0045254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1","termid":"PBO:0045254"}


id: GO:0036374
data:
  {"annotated_genes":["SJAG_03316","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94549,95369],"is_not":false,"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione + H2O = L-cysteinylglycine + L-glutamate.","definition_xrefs":["EC:3.4.19.13","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"glutathione hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00494","Reactome:R-HSA-9026916","Reactome:R-HSA-5433072","Reactome:R-HSA-1222712","Reactome:R-HSA-9026757","Reactome:R-HSA-5602984","Reactome:R-HSA-8943279","Reactome:R-HSA-9753634","Reactome:R-HSA-266046","RHEA:28807","Reactome:R-HSA-9026927","Reactome:R-HSA-9026912","MetaCyc:RXN-12618","Reactome:R-HSA-9026907","Reactome:R-HSA-9035966"],"synonyms":[{"name":"gamma-glutamyltranspeptidase activity","type":"related"},{"name":"glutathionase activity","type":"related"}],"termid":"GO:0036374","terms_by_termid":{"GO:0036374":null}}


id: PBO:0082869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core subunit of the ubiquinol-cytochrome c reductase complex; the ubiquinol-cytochrome c reductase complex (bc1 complex) is a component of the mitochondrial inner membrane electron transport chain","termid":"PBO:0082869"}


id: GO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 proteinase activated receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 4 proteinase activated receptor binding","synonyms":[{"name":"type 4 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031875"}


id: PBO:0083072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacid dehydratase; putative 2Fe-2S protein; catalyzes third step in the common pathway leading to biosynthesis of branched-chain amino acids","termid":"PBO:0083072"}


id: PBO:0091174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family small membrane protein, unknown biological role, human BLCAP ortholog","termid":"PBO:0091174"}


id: PBO:0054474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1874","termid":"PBO:0054474"}


id: GO:1903134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any trehalose catabolic process that is involved in cellular response to stress.","definition_xrefs":["PMID:15965643","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose catabolic process involved in cellular response to stress (obsolete GO:1903134)","synonyms":[{"name":"mycose catabolic process involved in cellular response to stress","type":"exact"},{"name":"mycose catabolism involved in cellular response to stress","type":"exact"},{"name":"mykose catabolic process involved in cellular response to stress","type":"exact"},{"name":"mykose catabolism involved in cellular response to stress","type":"exact"},{"name":"trehalose breakdown involved in cellular response to stress","type":"exact"},{"name":"trehalose catabolism involved in cellular response to stress","type":"exact"},{"name":"trehalose degradation involved in cellular response to stress","type":"exact"}],"termid":"GO:1903134"}


id: GO:0034272
data:
  {"annotated_genes":["SJAG_03403","SJAG_01876","SJAG_04552","SJAG_00114"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88804,93763,98298,101877],"is_not":false,"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A class III phosphatidylinositol 3-kinase complex that is involved in vacuolar protein sorting (VPS) via endosomes. In budding yeast, this complex consists of Vps30p, Vps34p, Vps38 and Vps15p.","definition_xrefs":["GOC:rb","PMID:11157979","GOC:ha","PMID:16421251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class III","termid":"GO:0035032"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_03403":null,"SJAG_04552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class III, type II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns-3-kinase complex II","type":"related"},{"name":"phosphatidylinositol 3-kinase complex II","type":"related"}],"termid":"GO:0034272","terms_by_termid":{"GO:0034272":null}}


id: FYPO:0001118
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115428,115446,115434],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[115606],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[115455,115657,115658,115661],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0000648"},{"annotations":[115503,115514,115540,115508],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[115660,115659,115666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[115664,115665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"abnormal vegetative cell morphology","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03453","SJAG_02819","SJAG_00514","SJAG_03581","SJAG_04522","SJAG_00028","SJAG_04312","SJAG_00266","SJAG_04332","SJAG_02592","SJAG_02013","SJAG_03048","SJAG_04280","SJAG_01794"],"single_locus_genotype_uniquenames":["pyp1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","pka1delta","gef1delta","rga6delta","efc25delta","scd1delta","sty1delta","ras1delta","rga4delta"],"synonyms":[{"name":"abnormal cell morphology during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001118","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0058634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6766","termid":"PBO:0058634"}


id: PBO:0060200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 20, cell surface associated pseudogene 1","termid":"PBO:0060200"}


id: GO:0070877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds to heme and to pri-miRNAs, and is required for the formation of a pre-microRNA (pre-miRNA), the initial step of microRNA (miRNA) biogenesis. The complex is composed of the double-stranded-RNA-specific RNase Drosha (also called RNASEN) and the RNA-binding protein DGCR8 (heme-free or heme-bound forms). Within the complex, DGCR8 function as a molecular anchor necessary for the recognition of pri-miRNA at dsRNA-ssRNA junction and directs RNASEN/Drosha to cleave the 3' and 5' strands of a stem-loop to release hairpin-shaped pre-miRNAs.","definition_xrefs":["PMID:16963499","PMID:17159994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonuclease III complex","termid":"GO:1903095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"microprocessor complex","termid":"GO:0070877"}


id: PBO:0068305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 10","termid":"PBO:0068305"}


id: GO:0099643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any signal release from a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"signal release from synapse","termid":"GO:0099643"}


id: GO:0050778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"positively_regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response","synonyms":[{"name":"stimulation of immune response","type":"narrow"},{"name":"up regulation of immune response","type":"exact"},{"name":"up-regulation of immune response","type":"exact"},{"name":"upregulation of immune response","type":"exact"}],"termid":"GO:0050778"}


id: PBO:0075904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5","termid":"PBO:0075904"}


id: SO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a signal peptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal_peptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:sig_peptide","type":"exact"},{"name":"Signal peptide region of CDS","type":"exact"}],"termid":"SO:0002251"}


id: PBO:0091218
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial gene product adjacent to sequence gap, N-term truncated","termid":"PBO:0091218"}


id: GO:0098554
data:
  {"annotated_genes":["SJAG_01307","SJAG_02196","SJAG_04018","SJAG_02102","SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90080,90890,91258,102001,106034],"is_not":false,"summary":null,"term":"GO:0098554"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the plasma membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02102":null,"SJAG_02196":null,"SJAG_04018":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"cytoplasmic side of endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098554","terms_by_termid":{"GO:0098554":null}}


id: PBO:0080533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 4","termid":"PBO:0080533"}


id: GO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group catabolic process (obsolete GO:0046139)","synonyms":[{"name":"coenzyme and prosthetic group breakdown","type":"exact"},{"name":"coenzyme and prosthetic group catabolic process","type":"exact"},{"name":"coenzyme and prosthetic group catabolism","type":"exact"},{"name":"coenzyme and prosthetic group degradation","type":"exact"}],"termid":"GO:0046139"}


id: PBO:0068668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 49, pseudogene","termid":"PBO:0068668"}


id: PBO:0055356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2785","termid":"PBO:0055356"}


id: GO:0006447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the translation of certain mRNAs involved in iron metabolism; regulated by the concentration of iron.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation by iron","termid":"GO:0006447"}


id: SO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000970 theta_replication (obsolete SO:0000970)","synonyms":[{"name":"theta replication","type":"exact"}],"termid":"SO:0000970"}


id: PBO:0002999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formamidase-like protein (predicted)","termid":"PBO:0002999"}


id: FYECO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to stationary phase.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase","termid":"FYECO:0000123"}


id: PBO:0078539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM31 antisense RNA 1","termid":"PBO:0078539"}


id: MOD:00928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:16771548","Unimod:513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[3-(2,5)-dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","synonyms":[{"name":"C8-QAT","type":"related"},{"name":"[3-(2,5)-Dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","type":"related"}],"termid":"MOD:00928"}


id: PBO:0017569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase Ept1 (predicted)","termid":"PBO:0017569"}


id: PBO:0050594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2","termid":"PBO:0050594"}


id: GO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism disseminates its spores.","definition_xrefs":["Wikipedia:Spore"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore dispersal","secondary_identifiers":["GO:0075327","GO:0075326"],"synonyms":[{"name":"active spore dispersal on or near host","type":"narrow"},{"name":"active spore dispersal on or near host during symbiotic interaction","type":"narrow"},{"name":"passive spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host during symbiotic interaction","type":"exact"}],"termid":"GO:0075325"}


id: GO:0106439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-lysine(out) + L-arginine(in) = L-lysine(in) + L-arginine(out).","definition_xrefs":["RHEA:70827","PMID:10903140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-lysine:L-arginine antiporter activity","termid":"GO:0106439"}


id: PBO:0089984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Syp1","termid":"PBO:0089984"}


id: GO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylation at centromere (obsolete GO:0031066)","termid":"GO:0031066"}


id: PBO:0075761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 3","termid":"PBO:0075761"}


id: GO:0042307
data:
  {"annotated_genes":["SJAG_02592","SJAG_03453","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87047,90550,98556],"is_not":false,"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein import into nucleus","termid":"GO:0042306"},{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"positively_regulates","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein import into nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein import into nucleus","type":"narrow"},{"name":"positive regulation of protein import into cell nucleus","type":"exact"},{"name":"positive regulation of protein transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of protein-nucleus import","type":"exact"},{"name":"stimulation of protein import into nucleus","type":"narrow"},{"name":"up regulation of protein import into nucleus","type":"exact"},{"name":"up-regulation of protein import into nucleus","type":"exact"},{"name":"upregulation of protein import into nucleus","type":"exact"}],"termid":"GO:0042307","terms_by_termid":{"GO:0042307":null}}


id: PBO:0087133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in synthesis of 18S and 5.8S rRNAs; component of ribosomal small subunit (SSU) processome and 90S preribosome; required for pre-rRNA packaging and compaction of processome into dense terminal balls; part of Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription with role in biogenesis of large ribosomal subunit; binds single stranded tracts of U's; relocalizes from nucleolus to nucleus upon DNA replication stress","termid":"PBO:0087133"}


id: PBO:0030095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_rapamycin","termid":"PBO:0030095"}


id: PBO:0029744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_calcium_import","termid":"PBO:0029744"}


id: GO:0075235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of zoospore movement on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of zoospore movement on or near host (obsolete GO:0075235)","synonyms":[{"name":"regulation of zoospore motility on or near host","type":"exact"}],"termid":"GO:0075235"}


id: GO:0009652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, such as leaves or tendrils, in response to a touch stimulus, usually toward or away from it.","definition_xrefs":["GOC:jl","PMID:16153165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thigmotropism","secondary_identifiers":["Wikipedia:Thigmotropism"],"termid":"GO:0009652"}


id: GO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteoglycan (obsolete GO:0005203)","synonyms":[{"name":"proteoglycan","type":"exact"}],"termid":"GO:0005203"}


id: GO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the swelling of soft tissues of the bitten organism as a result of excess water accumulation.","definition_xrefs":["PMID:20562011","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in induction of edema in another organism","synonyms":[{"name":"envenomation resulting in induction of edema in other organism","type":"exact"},{"name":"envenomation resulting in induction of oedema in other organism","type":"exact"}],"termid":"GO:0044398"}


id: PBO:0053821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1082","termid":"PBO:0053821"}


id: PBO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 15 pseudogene","termid":"PBO:0042640"}


id: PBO:0089632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm2","termid":"PBO:0089632"}


id: GO:2000326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nuclear receptor transcription coactivator activity (obsolete GO:2000326)","synonyms":[{"name":"negative regulation of ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"negative regulation of ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"}],"termid":"GO:2000326"}


id: PBO:0049755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holocytochrome c synthase","termid":"PBO:0049755"}


id: PBO:0075193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 5","termid":"PBO:0075193"}


id: PBO:0003276
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id: PBO:0080957
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id: PATO:0000407
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id: GO:0017153
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id: PBO:0055357
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id: PBO:0002159
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id: PBO:0063310
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id: PBO:0004291
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id: GO:1990979
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id: GO:0043427
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id: GO:0033043
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id: PBO:0065062
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id: PBO:0090498
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id: GO:0060411
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id: GO:0036070
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id: GO:0071955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from recycling endosomes to the Golgi.","definition_xrefs":["GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"recycling endosome to Golgi transport","termid":"GO:0071955"}


id: PBO:0043333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmin","termid":"PBO:0043333"}


id: GO:1900692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"regulation of (+)-kotanin anabolism","type":"exact"},{"name":"regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"regulation of (+)-kotanin formation","type":"exact"},{"name":"regulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900692"}


id: PBO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targets correlated with Clr3 and Sir2 targets","termid":"PBO:0001405"}


id: GO:1901531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hypochlorite.","definition_xrefs":["GOC:pr","PMID:22223481","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hypochlorite binding","termid":"GO:1901531"}


id: PR:O74789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 4 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03924","PANTHER:PTHR11668:SF22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase C26H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.05c","secondary_identifiers":["UniProtKB:O74789"],"synonyms":[{"name":"Spom972h-PPP4C","type":"exact"}],"termid":"PR:O74789"}


id: PR:O13897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C22A12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.06c","synonyms":[{"name":"Spom972h-SPAC22A12.06c","type":"exact"}],"termid":"PR:O13897"}


id: PBO:0068790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 27, pseudogene","termid":"PBO:0068790"}


id: PATO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000751 locomotor activity value (obsolete PATO:0000751)","termid":"PATO:0000751"}


id: PBO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-36 (pseudogene)","termid":"PBO:0051348"}


id: PBO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (predicted)","termid":"PBO:0000263"}


id: PBO:0051275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-5","termid":"PBO:0051275"}


id: GO:1905154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane invagination.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL","PMID:26589353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of membrane invagination","termid":"GO:1905153"},{"relation_name":"negatively_regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane invagination","synonyms":[{"name":"down regulation of membrane invagination","type":"exact"},{"name":"down-regulation of membrane invagination","type":"exact"},{"name":"downregulation of membrane invagination","type":"exact"},{"name":"inhibition of membrane invagination","type":"narrow"}],"termid":"GO:1905154"}


id: PBO:0049358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 16","termid":"PBO:0049358"}


id: PBO:0049398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametocyte specific factor 1","termid":"PBO:0049398"}


id: PBO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 19","termid":"PBO:0070520"}


id: GO:0072044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a collecting duct over time, from its formation to the mature structure. The collecting duct responds to vasopressin and aldosterone to regulate water, electrolyte and acid-base balance. It is the final common path through which urine flows before entering the ureter and then emptying into the bladder.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collecting duct development","termid":"GO:0072044"}


id: GO:2000906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"positively_regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of starch metabolic process","synonyms":[{"name":"positive regulation of starch metabolism","type":"exact"}],"termid":"GO:2000906"}


id: GO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + UDP-D-glucose = 5'-O-beta-D-glucosylpyridoxine + H+ + UDP.","definition_xrefs":["EC:2.4.1.160","RHEA:20177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"pyridoxine 5'-O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.160-RXN","KEGG_REACTION:R01912"],"synonyms":[{"name":"UDP-glucose-pyridoxine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-pyridoxine 5'-beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0047231"}


id: GO:0046348
data:
  {"annotated_genes":["SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87949,97678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino sugar breakdown","type":"exact"},{"name":"amino sugar catabolism","type":"exact"},{"name":"amino sugar degradation","type":"exact"},{"name":"aminosaccharide catabolic process","type":"exact"},{"name":"aminosaccharide catabolism","type":"exact"}],"termid":"GO:0046348","terms_by_termid":{"GO:0034232":null}}


id: PBO:0108904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 1","termid":"PBO:0108904"}


id: PBO:0048621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 2","termid":"PBO:0048621"}


id: FYPO:0000495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitochondrial transport","synonyms":[{"name":"abnormal mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: abnormal","type":"related"}],"termid":"FYPO:0000495"}


id: PBO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 20","termid":"PBO:0071722"}


id: SO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the structure of the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:transcript_variant","type":"exact"},{"name":"VAAST:transcript_variant","type":"exact"},{"name":"snpEff:TRANSCRIPT","type":"exact"},{"name":"transcript variant","type":"exact"}],"termid":"SO:0001576"}


id: SO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydrophobic regions are regions with a low affinity for water.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"hydrophobic_region_of_peptide","synonyms":[{"name":"hydropathic","type":"related"},{"name":"hydrophobic region of peptide","type":"related"},{"name":"hydrophobic_region","type":"exact"},{"name":"hydrophobicity","type":"related"}],"termid":"SO:0100013"}


id: FYPO:0005310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"},{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005310"}


id: PBO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft3","termid":"PBO:0001340"}


id: PBO:0085980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein-coding gene that evolved de novo via a series of point mutations in noncoding sequence; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough is increased upon depletion of Sup35p; may be involved in DNA repair pathway during stationary phase and contribute to robustness of cells when shifted to a nutrient-poor environment","termid":"PBO:0085980"}


id: PR:O74401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ERO1-like protein beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERO1-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.16c","secondary_identifiers":["UniProtKB:O74401"],"synonyms":[{"name":"SPBC4F6.16c","type":"related"},{"name":"Spom972h-ERO1LB","type":"exact"},{"name":"endoplasmic reticulum oxidoreductin-1-like protein A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74401"}


id: PBO:0084799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of the mitochondrial carrier family; high affinity pyridoxal 5'-phosphate (PLP) transporter, important for delivery of the PLP cofactor to mitochondrial enzymes; involved in mitochondrial iron homeostasis","termid":"PBO:0084799"}


id: PBO:0086219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that exhibits physical and genetic interactions with Rpb8p; Rpb8p is a subunit of RNA polymerases I, II, and III; computational analysis of large-scale protein-protein interaction data suggests a role in chromosome segregation","termid":"PBO:0086219"}


id: PBO:0029308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell_during_G0","termid":"PBO:0029308"}


id: PBO:0046989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 87 member A","termid":"PBO:0046989"}


id: PBO:0027134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027134"}


id: PBO:0038576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 1","termid":"PBO:0038576"}


id: GO:0070488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one neutrophil to one or more other neutrophils via adhesion molecules.","definition_xrefs":["GOC:sl","PMID:12972508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte aggregation","termid":"GO:0070486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neutrophil aggregation","synonyms":[{"name":"neutrocyte aggregation","type":"exact"},{"name":"neutrophil leucocyte aggregation","type":"exact"},{"name":"neutrophil leukocyte aggregation","type":"exact"},{"name":"neutrophilic leucocyte aggregation","type":"exact"},{"name":"neutrophilic leukocyte aggregation","type":"exact"}],"termid":"GO:0070488"}


id: FYPO:0007209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"decreased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"},{"name":"reduced sister chromatid cohesion along chromosome arms during mitotic interphase","type":"exact"}],"termid":"FYPO:0007209"}


id: PBO:0027593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027593"}


id: PBO:0054027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1358","termid":"PBO:0054027"}


id: PBO:0027137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_glucose_starvation","termid":"PBO:0027137"}


id: GO:1990343
data:
  {"annotated_genes":["SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115597],"is_not":false,"summary":null,"term":"GO:1990343"}]},"cv_name":"cellular_component","definition":"A region of heterochromatin that is formed dynamically under specific growth conditions by a process that requires RNAi, and is enriched in histone H3 methylated on lysine 9 (H3K9me).","definition_xrefs":["PMID:23151475","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"heterochromatin domain","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"HOOD","type":"exact"}],"termid":"GO:1990343","terms_by_termid":{"GO:1990343":null}}


id: GO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein intermediate light chain (obsolete GO:0001685)","synonyms":[{"name":"axonemal dynein intermediate light chain","type":"exact"}],"termid":"GO:0001685"}


id: PBO:0048164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 9","termid":"PBO:0048164"}


id: GO:0099175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a postsynapse.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse organization","synonyms":[{"name":"regulation of postsynapse organisation","type":"exact"},{"name":"regulation of postsynapse organization and biogenesis","type":"related"},{"name":"regulation of postsynapse structure","type":"exact"}],"termid":"GO:0099175"}


id: PATO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001081 physical measure value (obsolete PATO:0001081)","termid":"PATO:0001081"}


id: GO:0044127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont regulates its progression from an initial condition to a later condition, within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of development of symbiont in host","termid":"GO:0044127"}


id: PBO:0062673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily A member 2","termid":"PBO:0062673"}


id: PBO:0055930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37B","termid":"PBO:0055930"}


id: GO:0102677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + campesterol + O2 + NADPH = (22S)-22-hydroxycampesterol + H2O + NADP.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"campesterol,NADPH:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-4225"],"termid":"GO:0102677"}


id: GO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synapse maturation","termid":"GO:0090128"},{"relation_name":"positively_regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse maturation","termid":"GO:0090129"}


id: PBO:0109051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL3 pseudogene 2","termid":"PBO:0109051"}


id: PBO:0090920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase Guk1","termid":"PBO:0090920"}


id: PBO:0055658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3098","termid":"PBO:0055658"}


id: FYPO:0009006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle without either of the normal steps that precede it: conjugation with cellular fusion and karyogamy with nuclear fusion.","definition_xrefs":["PomBase:mlr","PMID:36650056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}


id: GO:0140059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated and organized into dendritic branches.","definition_xrefs":["PMID:23270857","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"is_a","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite arborization","termid":"GO:0140059"}


id: GO:1904859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis to vascular endothelial growth factor.","definition_xrefs":["PMID:21885851","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:1904857"},{"relation_name":"positively_regulates","term_name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis to vascular endothelial growth factor","synonyms":[{"name":"activation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"narrow"},{"name":"up regulation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"exact"},{"name":"up-regulation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"exact"},{"name":"upregulation of endothelial cell chemotaxis to vascular endothelial growth factor","type":"exact"}],"termid":"GO:1904859"}


id: GO:0047016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 7-alpha-hydroxycholesterol = NADH + H+ + 7-alpha-hydroxycholest-4-en-3-one.","definition_xrefs":["EC:1.1.1.181","MetaCyc:1.1.1.181-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity","secondary_identifiers":["RHEA:11896"],"synonyms":[{"name":"3-beta-hydroxy-Delta(5)-C(27)-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"cholest-5-ene-3beta,7alpha-diol 3beta-dehydrogenase activity","type":"related"},{"name":"cholest-5-ene-3beta,7alpha-diol:NAD+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047016"}


id: GO:0061503
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88092],"is_not":false,"summary":null,"term":"GO:0061503"}]},"cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent dehydration of t6A to form cyclic t6A.","definition_xrefs":["PMID:23242255","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016829","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061503","terms_by_termid":{"GO:0061503":null}}


id: PBO:0039831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox pseudogene 2","termid":"PBO:0039831"}


id: PBO:0039727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4","termid":"PBO:0039727"}


id: GO:0008770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [acyl-carrier protein] + H2O = 4'-phosphopantetheine + apoprotein.","definition_xrefs":["EC:3.1.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140096","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"[acyl-carrier-protein] phosphodiesterase activity","secondary_identifiers":["MetaCyc:3.1.4.14-RXN","RHEA:20537"],"synonyms":[{"name":"ACP hydrolyase activity","type":"related"},{"name":"ACP phosphodiesterase activity","type":"exact"},{"name":"AcpH","type":"related"},{"name":"[acyl-carrier protein] phosphodiesterase activity","type":"exact"},{"name":"[acyl-carrier-protein] 4'-pantetheine-phosphohydrolase activity","type":"related"},{"name":"acyl-carrier-protein 4'-pantetheine-phosphohydrolase activity","type":"related"},{"name":"acyl-carrier-protein phosphodiesterase activity","type":"related"},{"name":"holo-acyl-carrier-protein 4'-pantetheine-phosphohydrolase activity","type":"related"}],"termid":"GO:0008770"}


id: GO:1900437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"}


id: PBO:0041605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 2","termid":"PBO:0041605"}


id: PBO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8A","termid":"PBO:0052482"}


id: PBO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RPC40","termid":"PBO:0016572"}


id: GO:0008207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"C21-steroid hormone metabolic process","synonyms":[{"name":"C21-steroid hormone metabolism","type":"exact"}],"termid":"GO:0008207"}


id: PBO:0017957
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease","termid":"PBO:0017957"}


id: GO:0044728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of adding or removing a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation or demethylation (obsolete GO:0044728)","synonyms":[{"name":"changes in DNA methylation","type":"related"}],"termid":"GO:0044728"}


id: FYPO:0000950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"elongated aseptate vegetative cell","synonyms":[{"name":"elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated aseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0000950"}


id: PBO:0070869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15","termid":"PBO:0070869"}


id: PBO:0027067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_metabolic_process","termid":"PBO:0027067"}


id: GO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a cocaine stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to cocaine","termid":"GO:0042220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to cocaine","synonyms":[{"name":"behavioural response to cocaine","type":"exact"}],"termid":"GO:0048148"}


id: GO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling.","definition_xrefs":["GOC:dph","GOC:PARL","PMID:16618809","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory granule maturation","termid":"GO:0061792"}


id: RO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differs_in","termid":"RO:0002424"}


id: PBO:0016049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpp40 (predicted)","termid":"PBO:0016049"}


id: PBO:0065163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion locus lncRNA, testis expressed","termid":"PBO:0065163"}


id: PBO:0075375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 12","termid":"PBO:0075375"}


id: PBO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 10","termid":"PBO:0072133"}


id: PBO:0013465
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similarity to YCL030C is at the C-term, S. pombe his7 is similar to YCl030C at the N-term","termid":"PBO:0013465"}


id: PBO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member B, pseudogene","termid":"PBO:0047083"}


id: GO:0009448
data:
  {"annotated_genes":["SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87883],"is_not":false,"summary":null,"term":"GO:0009448"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gamma-aminobutyric acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4-aminobutanoate metabolic process","type":"exact"},{"name":"4-aminobutanoate metabolism","type":"exact"},{"name":"4-aminobutyrate metabolic process","type":"exact"},{"name":"4-aminobutyrate metabolism","type":"exact"},{"name":"GABA metabolic process","type":"exact"},{"name":"GABA metabolism","type":"exact"},{"name":"gamma-aminobutyric acid metabolism","type":"exact"}],"termid":"GO:0009448","terms_by_termid":{"GO:0009448":null}}


id: PBO:0052166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 14","termid":"PBO:0052166"}


id: PBO:0069117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 366, pseudogene","termid":"PBO:0069117"}


id: GO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"acetylcholine secretion","termid":"GO:0061526"}


id: GO:0006564
data:
  {"annotated_genes":["SJAG_04964","SJAG_02791","SJAG_04449","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88399,96426,106329,113066],"is_not":false,"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"serine family amino acid biosynthetic process","termid":"GO:0009070"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_04449":null,"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-serine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SERSYN-PWY"],"synonyms":[{"name":"L-serine anabolism","type":"exact"},{"name":"L-serine biosynthesis","type":"exact"},{"name":"L-serine formation","type":"exact"},{"name":"L-serine synthesis","type":"exact"}],"termid":"GO:0006564","terms_by_termid":{"GO:0006564":null}}


id: PBO:0039824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor interacting protein 1","termid":"PBO:0039824"}


id: PBO:0062489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 5 pseudogene","termid":"PBO:0062489"}


id: PBO:0108964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1A","termid":"PBO:0108964"}


id: FYPO:0003514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynylselenocysteine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"hercynylselenocysteine absent from cell","termid":"FYPO:0003514"}


id: GO:0048442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sepal over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"flower calyx development","termid":"GO:0048464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal development","secondary_identifiers":["GO:0048421"],"termid":"GO:0048442"}


id: GO:0031069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hair follicle are generated and organized.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"hair cycle process","termid":"GO:0022405"},{"relation_name":"part_of","term_name":"hair follicle development","termid":"GO:0001942"},{"relation_name":"part_of","term_name":"epidermis morphogenesis","termid":"GO:0048730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle morphogenesis","termid":"GO:0031069"}


id: PBO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6 pseudogene","termid":"PBO:0062158"}


id: PBO:0065803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1B, member RAS oncogene family","termid":"PBO:0065803"}


id: GO:0140707
data:
  {"annotated_genes":["SJAG_03449","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115712,85292,87536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"}]},"cv_name":"molecular_function","definition":"Binding to chromatin and the nuclear inner membrane, in order to establish and maintain the heterochromatin location and organization, or to enable equal segregation of the nuclear membrane during mitosis.","definition_xrefs":["PMID:24184107","PMID:31048766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"chromatin-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0140707","terms_by_termid":{"GO:0062239":null}}


id: PBO:0076101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 6","termid":"PBO:0076101"}


id: FYPO:0003257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal proline import","termid":"FYPO:0003256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased proline import","synonyms":[{"name":"decreased L-proline import","type":"exact"},{"name":"decreased L-proline import across plasma membrane","type":"exact"},{"name":"decreased proline import during mitotic cell cycle","type":"related"},{"name":"decreased proline import during vegetative growth","type":"exact"},{"name":"decreased proline import into cell","type":"exact"},{"name":"decreased proline uptake","type":"exact"},{"name":"reduced proline import","type":"exact"}],"termid":"FYPO:0003257"}


id: PBO:0057030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 125b-2","termid":"PBO:0057030"}


id: PBO:0056301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 pseudogene","termid":"PBO:0056301"}


id: GO:0019795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of any amino acid that does not normally occur as a constituent residue of proteins.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete nonprotein amino acid biosynthetic process (obsolete GO:0019795)","synonyms":[{"name":"nonprotein amino acid anabolism","type":"exact"},{"name":"nonprotein amino acid biosynthesis","type":"exact"},{"name":"nonprotein amino acid biosynthetic process","type":"exact"},{"name":"nonprotein amino acid formation","type":"exact"},{"name":"nonprotein amino acid synthesis","type":"exact"}],"termid":"GO:0019795"}


id: PBO:0082679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; ESCRT-I is involved in ubiquitin-dependent sorting of proteins into the endosome; prevents polyubiquitination of the arrestin-related protein Rim8p, thereby directing its monoubiquitination by Rsp5p; homologous to the mouse and human Tsg101 tumor susceptibility gene; mutants exhibit a Class E Vps phenotype;","termid":"PBO:0082679"}


id: GO:0030404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete collagenase 3 activity (obsolete GO:0030404)","synonyms":[{"name":"MMP-13","type":"exact"},{"name":"collagenase 3 activity","type":"exact"},{"name":"matrix metalloproteinase 13","type":"exact"}],"termid":"GO:0030404"}


id: PBO:0050952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon epsilon","termid":"PBO:0050952"}


id: GO:2000446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"regulation of MIF signaling pathway","type":"exact"},{"name":"regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000446"}


id: PBO:0089562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol diphosphate phosphatase","termid":"PBO:0089562"}


id: PBO:0082516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the NatC type N-terminal acetyltransferase (NAT); involved in subcellular targeting of select N-terminally acetylated substrates to the Golgi apparatus (Arl3p and Grh1p) and the inner nuclear membrane (Trm1p); required for replication of dsRNA virus; human NatC ortholog, NAA30, functionally complements the null, requiring either auxiliary subunit Mak10p or co-expression of human ortholog, NAA35; NAA60, the human NatF gene, also complements the null allele","termid":"PBO:0082516"}


id: PR:Q10109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lem2 gene.","definition_xrefs":["UniProtKB:Q10109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.10","synonyms":[{"name":"LEM domain protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lem2","type":"exact"}],"termid":"PR:Q10109"}


id: PBO:0069433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 698, pseudogene","termid":"PBO:0069433"}


id: MOD:01812
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to 5x(13)C,1x(15)N labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:12771378","Unimod:268#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"},{"relation_name":"is_a","term_name":"5x(13)C,1x(15)N labeled residue","termid":"MOD:01809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C,1x(15)N labeled L-methionine sulfoxide","synonyms":[{"name":"13C(5) 15N(1) Silac label","type":"related"},{"name":"Label:13C(5)15N(1)","type":"related"}],"termid":"MOD:01812"}


id: PR:O74766
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC24C6.04 gene.","definition_xrefs":["UniProtKB:O74766","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.04","synonyms":[{"name":"L-glutamate gamma-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P5C dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC24C6.04","type":"exact"}],"termid":"PR:O74766"}


id: PATO:0000107
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000107 alkali sensitivity (obsolete PATO:0000107)","termid":"PATO:0000107"}


id: PBO:0072880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS pseudogene 1","termid":"PBO:0072880"}


id: PBO:0057569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 764","termid":"PBO:0057569"}


id: PBO:0067886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 188","termid":"PBO:0067886"}


id: FYPO:0004372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic G2 DNA damage checkpoint is decreased. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0072435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased response to mitotic G2 DNA damage checkpoint signaling","synonyms":[{"name":"decreased G2 DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"reduced response to mitotic G2 DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0004372"}


id: PBO:0067878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 180","termid":"PBO:0067878"}


id: GO:0099166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099166)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane of symmetric synapse","type":"narrow"}],"termid":"GO:0099166"}


id: PBO:0045931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member D2","termid":"PBO:0045931"}


id: GO:0010293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisic aldehyde + H2O + O2 = abscisate + H2O2 + H+.","definition_xrefs":["RHEA:20529","EC:1.2.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl-aldehyde oxidase activity","termid":"GO:0018488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"abscisic aldehyde oxidase activity","secondary_identifiers":["GO:0033725","MetaCyc:1.2.3.14-RXN","KEGG_REACTION:R06957"],"synonyms":[{"name":"AAO3","type":"related"},{"name":"AOdelta","type":"related"},{"name":"abscisic-aldehyde oxidase activity","type":"related"},{"name":"abscisic-aldehyde:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0010293"}


id: GO:0015418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + quaternary ammonium(out) = ADP + H+ + phosphate + quaternary ammonium(in).","definition_xrefs":["GOC:pz","RHEA:11036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type quaternary ammonium compound transporting activity","secondary_identifiers":["GO:0102908","EC:7.6.2.9","MetaCyc:RXN-8638"],"synonyms":[{"name":"ATP-dependent quaternary-ammonium compound transmembrane transporting activity","type":"related"},{"name":"ATPase-coupled quaternary ammonium compound transmembrane transporting activity","type":"related"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"quarternary amine transporter activity","type":"broad"},{"name":"quaternary amine uptake transporter activity","type":"related"},{"name":"quaternary-amine-transporting ATPase activity","type":"related"},{"name":"quaternary-ammonium-compound ABC transporter","type":"exact"},{"name":"quaternary-ammonium-compound-transporting ATPase activity","type":"related"}],"termid":"GO:0015418"}


id: PBO:0064732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 68","termid":"PBO:0064732"}


id: PATO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated green","synonyms":[{"name":"pale green","type":"exact"}],"termid":"PATO:0001272"}


id: PBO:0046391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP400 pseudogene 1","termid":"PBO:0046391"}


id: FYPO:0002382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation occurs to a greater extent than normal in centromere outer repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H4 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H4 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H4 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H4 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002382"}


id: PBO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin/tropomyosin family","termid":"PBO:0001292"}


id: GO:2001135
data:
  {"annotated_genes":["SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84132],"is_not":false,"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocytic recycling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of endocytic recycling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of retrograde transport of endocytic vesicles","type":"related"}],"termid":"GO:2001135","terms_by_termid":{"GO:2001135":null}}


id: PBO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan glucosidase Exg2, unknown specificity","termid":"PBO:0002595"}


id: PR:O14194
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ggt2 gene.","definition_xrefs":["UniProtKB:O14194","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.06c","synonyms":[{"name":"Spom972h-ggt2","type":"exact"},{"name":"gamma-glutamyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14194"}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: PBO:0061786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncomodulin 2","termid":"PBO:0061786"}


id: PBO:0070842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 21","termid":"PBO:0070842"}


id: PBO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.71","termid":"PBO:0002641"}


id: PBO:0069581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 855, pseudogene","termid":"PBO:0069581"}


id: PBO:0069894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1184, pseudogene","termid":"PBO:0069894"}


id: GO:0097475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.","definition_xrefs":["CL:0000100","PMID:20711475","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron migration","termid":"GO:0097475"}


id: GO:1903346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["GO_REF:0000058","GOC:sart","GOC:TermGenie","PMID:21298005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein polyglycylation","termid":"GO:1903344"},{"relation_name":"positively_regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein polyglycylation","synonyms":[{"name":"activation of protein polyglycylation","type":"narrow"},{"name":"up regulation of protein polyglycylation","type":"exact"},{"name":"up-regulation of protein polyglycylation","type":"exact"},{"name":"upregulation of protein polyglycylation","type":"exact"}],"termid":"GO:1903346"}


id: FYPO:0002281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal size, shape, or structure.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination with abnormal germ tube morphology","synonyms":[{"name":"inviable following spore germination with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0002281"}


id: FYPO:0008139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"dilated endoplasmic reticulum lumen","synonyms":[{"name":"dialted ER lumen","type":"exact"}],"termid":"FYPO:0008139"}


id: SO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_N6_2prime_O_trimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_N6_2_prime_O_trimethyladenosine","secondary_identifiers":["RNAMOD:089"],"synonyms":[{"name":"N6,N6,2'-O-trimethyladenosine","type":"exact"},{"name":"m62Am","type":"exact"}],"termid":"SO:0001313"}


id: PBO:0073527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2","termid":"PBO:0073527"}


id: PBO:0067782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 84","termid":"PBO:0067782"}


id: PBO:0042492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 13","termid":"PBO:0042492"}


id: PBO:0086519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; overlaps ORF YLR235C","termid":"PBO:0086519"}


id: PBO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 11","termid":"PBO:0070706"}


id: PBO:0088150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuole membrane protein that interacts with Atg8p; functions in the vacuolar membrane recruitment of Atg8p to facilitate the degradation of vacuolar integral membrane proteins during early-stationary vacuole turnover (EVT), a general degradation process for vacuolar integral membrane proteins when cells enter stationary phase; null mutant is defective in stationary phase-induced vacuolar microdomain formation; homolog of S. pombe hfl1; homolog of human TMEM184","termid":"PBO:0088150"}


id: PR:Q9P4X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh6 gene.","definition_xrefs":["UniProtKB:Q9P4X2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.04c","synonyms":[{"name":"Spom972h-omh6","type":"exact"}],"termid":"PR:Q9P4X2"}


id: GO:0007386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which embryonic segments are divided into compartments that will result in differences in cell differentiation.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compartment pattern specification","synonyms":[{"name":"compartment specification","type":"related"}],"termid":"GO:0007386"}


id: FYPO:0006598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of threonine at position 3 of histone H3 is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-T3 phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone H3 phosphorylation at T3 during vegetative growth","type":"exact"},{"name":"decreased histone H3-T3 phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-pT3 during vegetative growth","type":"related"},{"name":"decreased histone H3T3 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-T3 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006598"}


id: GO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"}


id: PBO:0031807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_passage_through_START_of_mitotic_cell_cycle","termid":"PBO:0031807"}


id: GO:0004467
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109606,101770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[101771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[101772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-CoA + AMP + diphosphate. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:15421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"long-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-193766","Reactome:R-HSA-193424","MetaCyc:RXN-7904","Reactome:R-HSA-201035","Reactome:R-HSA-548843","Reactome:R-HSA-5696004","MetaCyc:PWY-5143","Reactome:R-HSA-192137","Reactome:R-HSA-193401","Reactome:R-HSA-193727","Reactome:R-HSA-193407","UM-BBD_enzymeID:e0025","Reactome:R-HSA-159425","GO:0003996","Reactome:R-HSA-193743","Reactome:R-HSA-2046085","Reactome:R-HSA-193711","EC:6.2.1.3","Reactome:R-HSA-2046098","Reactome:R-HSA-9734535"],"synonyms":[{"name":"LCFA synthetase activity","type":"related"},{"name":"acyl-CoA ligase activity","type":"related"},{"name":"acyl-CoA synthetase activity","type":"related"},{"name":"acyl-activating enzyme activity","type":"broad"},{"name":"fatty acid thiokinase (long-chain) activity","type":"related"},{"name":"lignoceroyl-CoA synthase activity","type":"related"},{"name":"long chain fatty acyl-CoA synthetase activity","type":"related"},{"name":"long-chain acyl CoA synthetase activity","type":"related"},{"name":"long-chain acyl-CoA synthetase activity","type":"exact"},{"name":"long-chain acyl-coenzyme A synthetase activity","type":"related"},{"name":"long-chain fatty acid activation","type":"related"},{"name":"long-chain fatty acyl coenzyme A synthetase activity","type":"related"},{"name":"long-chain-fatty-acid-CoA ligase activity","type":"exact"},{"name":"long-chain-fatty-acyl-CoA synthetase activity","type":"exact"},{"name":"pristanoyl-CoA synthetase","type":"narrow"},{"name":"stearoyl-CoA synthetase","type":"narrow"},{"name":"thiokinase","type":"related"}],"termid":"GO:0004467","terms_by_termid":{"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: PR:O94307
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03960","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.02","secondary_identifiers":["UniProtKB:O94307"],"synonyms":[{"name":"Spom972h-PFDN5","type":"exact"},{"name":"byr1-binding protein Bob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94307"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: GO:0007150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process whereby cells develop a specific morphology under a specific set of circumstances.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete growth pattern (obsolete GO:0007150)","synonyms":[{"name":"growth pattern","type":"exact"}],"termid":"GO:0007150"}


id: MOD:00413
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a cysteine residue with biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine.","definition_xrefs":["Unimod:20#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine derivatized cysteine","synonyms":[{"name":"Biotinyl-iodoacetamidyl-3,6-dioxaoctanediamine","type":"related"},{"name":"PEO-Iodoacetyl-LC-Biotin","type":"related"}],"termid":"MOD:00413"}


id: PBO:0076210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 20","termid":"PBO:0076210"}


id: PBO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin (predicted)","termid":"PBO:0000552"}


id: PR:O60016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-9 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.08c","synonyms":[{"name":"H3-K9-HMTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-clr4","type":"exact"},{"name":"cryptic loci regulator 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"histone H3-K9 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysine N-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60016"}


id: PBO:0078515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 1","termid":"PBO:0078515"}


id: PBO:0044201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L","termid":"PBO:0044201"}


id: PBO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit mu 2","termid":"PBO:0039667"}


id: GO:0008319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete prenyl protein specific endopeptidase activity (obsolete GO:0008319)","synonyms":[{"name":"prenyl protein specific endopeptidase activity","type":"exact"}],"termid":"GO:0008319"}


id: SO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_region that codes for a protease cleavage site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"protease_site","synonyms":[{"name":"protease site","type":"exact"}],"termid":"SO:0001956"}


id: PBO:0111860
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin homology (CH) domain","termid":"PBO:0111860"}


id: PBO:0018113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP-glucose-1-phosphate uridylyltransferase-like Ugp1","termid":"PBO:0018113"}


id: GO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dehydration of peptidyl-serine, followed by hydrogenation to produce peptidyl-D-alanine.","definition_xrefs":["RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-D-alanine racemization","termid":"GO:0019122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-D-alanine racemization via peptidyl-L-serine","termid":"GO:0019917"}


id: PBO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNL-type zinc finger","termid":"PBO:0045265"}


id: PBO:0064753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 89","termid":"PBO:0064753"}


id: PBO:0012296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in transcription (predicted)","termid":"PBO:0012296"}


id: FYPO:0007479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the assembly and stable inheritance of heterochromatic structure is normal (i.e. indistinguishable from wild type) in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PomBase:mah","PMID:31278118","PMID:29899117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"normal epigenetic heterochromatin inheritance","synonyms":[{"name":"normal PEV","type":"related"},{"name":"normal epigenetic heterochromatin propagation","type":"exact"},{"name":"normal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007479"}


id: PBO:0081387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 226","termid":"PBO:0081387"}


id: PBO:0056306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 2","termid":"PBO:0056306"}


id: SO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid LSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_LSU_rRNA_gene","synonyms":[{"name":"plastid large subunit rRNA gene","type":"exact"}],"termid":"SO:0002367"}


id: GO:1903027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opsonization.","definition_xrefs":["GO_REF:0000058","PMID:22333221","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of opsonization","termid":"GO:1903027"}


id: GO:0022894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 20 to 85 picoSiemens that opens in response to stimulus by internal calcium ions. Intermediate conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["OMIM:602754","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intermediate conductance calcium-activated potassium channel activity","synonyms":[{"name":"IK KCa channels","type":"exact"},{"name":"IK calcium-activated potassium channel activity","type":"exact"},{"name":"intermdiate conductance KCa channels","type":"exact"}],"termid":"GO:0022894"}


id: PBO:0088537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit H","termid":"PBO:0088537"}


id: PBO:0041016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 3","termid":"PBO:0041016"}


id: PBO:0054943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2357","termid":"PBO:0054943"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: PBO:0079604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F pseudogene 1","termid":"PBO:0079604"}


id: PBO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad6 homolog, ubiquitin conjugating enzyme E2 Rhp6","termid":"PBO:0000269"}


id: GO:0061801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3B, beta3 and gamma2 polypeptide chains.","definition_xrefs":["GOC:dph","PMID:15979864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-5B complex","synonyms":[{"name":"laminin 3B32 complex","type":"exact"}],"termid":"GO:0061801"}


id: GO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-12","termid":"GO:0070671"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-12","synonyms":[{"name":"cellular response to IL-12","type":"exact"}],"termid":"GO:0071349"}


id: PBO:0061485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRG3 antisense RNA 1","termid":"PBO:0061485"}


id: GO:0005826
data:
  {"annotated_genes":["SJAG_02831","SJAG_03625","SJAG_03681","SJAG_00677","SJAG_03596","SJAG_00185","SJAG_04597","SJAG_00845","SJAG_00750","SJAG_02737","SJAG_03703","SJAG_04498","SJAG_02838","SJAG_02278","SJAG_01143","SJAG_00663","SJAG_00807","SJAG_04375","SJAG_01114","SJAG_00279","SJAG_01665","SJAG_02431","SJAG_04077","SJAG_01889","SJAG_03887","SJAG_03704","SJAG_04887","SJAG_02864","SJAG_03631","SJAG_00938","SJAG_00228","SJAG_04621","SJAG_04461","SJAG_03145","SJAG_02320","SJAG_00229","SJAG_00268","SJAG_02266","SJAG_02392","SJAG_03374","SJAG_03025","SJAG_00082","SJAG_01277","SJAG_05285","SJAG_04703","SJAG_03088","SJAG_03581","SJAG_04509","SJAG_03379","SJAG_03564","SJAG_02169","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98588,115266,115267,115268,115269,115270,115545,115682],"is_not":false,"summary":null,"term":"GO:0005826"},{"annotations":[84503,114950,97426,112059,91112,114758,91464,115622,115716,103215,115627,88719,86191,88764,103061,86019,102369,97433,90582,94206,88504,90007,93822,108482,99872,90753,106942,111974,113182,114019,115624,109540,115629,84121,98592,96861,106982,85536,97095,92492,94463,114001,86966,115631,86920,93382,104309,113771,101518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110085"},{"annotations":[96691,114002,101307,96862,105244],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[114020,102370,92024,93383,91113,99873,92493,90583,97096,109541,105245,86967,114003,84504,108483,106983,86192],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[113092,96272,94072,88765,105246,113183,94207,104310,114004,93823,103216,100094,97122,88505,98593],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. In animal cells, the contractile ring is located at the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms at the mother-bud neck before mitosis.","definition_xrefs":["GOC:expert_jrp","GOC:sgd_curators","PMID:28914606","ISBN:0805319409","GOC:vw","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile ring","termid":"GO:0070938"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_01665":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04077":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0070938","GO:0015629","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"secondary_identifiers":["GO:0030480"],"synonyms":[{"name":"CAR","type":"exact"},{"name":"actomyosin ring","type":"related"},{"name":"constriction ring","type":"related"},{"name":"contractile actomyosin ring","type":"exact"},{"name":"cytokinetic ring","type":"related"}],"termid":"GO:0005826","terms_by_termid":{"GO:0005826":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: PBO:0083920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1; major enzyme of polyprenol synthesis in both the endoplasmic reticulum (ER) and in lipid droplets; participates in ER protein sorting; human ortholog DHDDS functionally complements the heat sensitive growth defect of a ts allele, and is associated with retinitis pigmentosa","termid":"PBO:0083920"}


id: PBO:0054604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2009","termid":"PBO:0054604"}


id: GO:0106377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-ATP + H2O = 2-hydroxy-AMP + H+ + diphosphate.","definition_xrefs":["PMID:11139615","RHEA:67392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0047429","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-ATP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2395872"],"termid":"GO:0106377"}


id: PR:O13704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C13F5.05, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.05","synonyms":[{"name":"Spom972h-mpd1","type":"exact"}],"termid":"PR:O13704"}


id: PBO:0055725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 2","termid":"PBO:0055725"}


id: PR:P78827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ilv5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketol-acid reductoisomerase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.12","synonyms":[{"name":"Spom972h-ilv5","type":"exact"},{"name":"acetohydroxy-acid reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78827"}


id: PBO:0015659
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific splicing","termid":"PBO:0015659"}


id: GO:1900207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:TermGenie","PMID:9758706","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"},{"relation_name":"negatively_regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pronephric nephron tubule development","synonyms":[{"name":"down regulation of pronephric nephron tubule development","type":"exact"},{"name":"down-regulation of pronephric nephron tubule development","type":"exact"},{"name":"downregulation of pronephric nephron tubule development","type":"exact"},{"name":"inhibition of pronephric nephron tubule development","type":"narrow"}],"termid":"GO:1900207"}


id: GO:0010133
data:
  {"annotated_genes":["SJAG_02235","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103293,114134],"is_not":false,"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including glutamate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"proline catabolic process","termid":"GO:0006562"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"proline catabolic process to glutamate","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019494","MetaCyc:PROUT-PWY"],"synonyms":[{"name":"proline breakdown to glutamate","type":"exact"},{"name":"proline degradation to glutamate","type":"exact"},{"name":"proline oxidation","type":"related"}],"termid":"GO:0010133","terms_by_termid":{"GO:0010133":null}}


id: GO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol = D-myo-inositol 1,2-cyclic phosphate + diacylglycerol.","definition_xrefs":["EC:4.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["MetaCyc:3.1.4.10-RXN","RHEA:17093"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase (1D-myo-inositol-1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol inositolphosphohydrolase (cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidylinositol phosphodiesterase activity","type":"exact"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"}],"termid":"GO:0004436"}


id: FYPO:0001992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is elongated, and is inviable. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell with mislocalized septum and anucleate compartment","termid":"FYPO:0001226"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate monoseptate vegetative cell","termid":"FYPO:0001917"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with abnormal septum","termid":"FYPO:0002889"},{"relation_name":"output_of","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000631","FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell with mislocalized septum","secondary_identifiers":["FYPO:0001993"],"synonyms":[{"name":"inviable elongated mononucleate cell with abnormal septum location","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal septum position","type":"exact"},{"name":"inviable elongated mononucleate cell with asymmetric septum","type":"exact"},{"name":"inviable elongated mononucleate cell with asymmetrically located septum","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalised septum","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalized septum during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate monoseptate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized septum and mislocalized nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized septum during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate vegetative cell with misplaced septum","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with single mislocalized septum","type":"exact"},{"name":"inviable long mononucleate cell with mislocalized septum","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell with mislocalized septum","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell with mislocalized septum","type":"exact"}],"termid":"FYPO:0001992"}


id: PBO:0062284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 1","termid":"PBO:0062284"}


id: PBO:0084365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER protein, enriched at nucleus-vacuolar junctions (NVJ); involved in nonvesicular transfer of ceramides from ER to Golgi; may be involved in sterol metabolism or signaling at the NVJ; contains a synaptotagmin-like-mitochondrial-lipid binding protein (SMP) domain; binds phosphatidylinositols and other lipids in a large-scale study; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0084365"}


id: FYPO:0004563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha-galactosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal alpha-galactosidase activity","termid":"FYPO:0004563"}


id: GO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity","termid":"GO:0001914"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"positively_regulates","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated cytotoxicity","synonyms":[{"name":"activation of T cell mediated cytotoxicity","type":"narrow"},{"name":"positive regulation of T cell mediated apoptosis","type":"exact"},{"name":"positive regulation of T cell mediated cell death","type":"exact"},{"name":"positive regulation of T cell mediated cell killing","type":"exact"},{"name":"positive regulation of T cell mediated cytolysis","type":"related"},{"name":"positive regulation of T lymphocyte mediated cytotoxicity","type":"exact"},{"name":"positive regulation of T-cell mediated apoptosis","type":"exact"},{"name":"positive regulation of T-cell mediated cell death","type":"exact"},{"name":"positive regulation of T-cell mediated cell killing","type":"exact"},{"name":"positive regulation of T-cell mediated cytolysis","type":"related"},{"name":"positive regulation of T-cell mediated cytotoxicity","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated cytotoxicity","type":"exact"},{"name":"stimulation of T cell mediated cytotoxicity","type":"narrow"},{"name":"up regulation of T cell mediated cytotoxicity","type":"exact"},{"name":"up-regulation of T cell mediated cytotoxicity","type":"exact"},{"name":"upregulation of T cell mediated cytotoxicity","type":"exact"}],"termid":"GO:0001916"}


id: PBO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane-actinomyosin ring linker protein Sbg1","termid":"PBO:0036415"}


id: PBO:0062535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 4","termid":"PBO:0062535"}


id: GO:0033580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid at the surface of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation at cell surface (obsolete GO:0033580)","synonyms":[{"name":"protein amino acid galactosylation at cell surface","type":"exact"}],"termid":"GO:0033580"}


id: PBO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex beta subunit","termid":"PBO:0002723"}


id: GO:0010829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"negatively_regulates","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucose transmembrane transport","synonyms":[{"name":"negative regulation of glucose transport","type":"related"}],"termid":"GO:0010829"}


id: PBO:0088659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic trafficking protein","termid":"PBO:0088659"}


id: PBO:0089712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase Msf1","termid":"PBO:0089712"}


id: PBO:0038419
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0038419"}


id: PBO:0091496
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monogenic PPCDC","termid":"PBO:0091496"}


id: GO:0051650
data:
  {"annotated_genes":["SJAG_03938","SJAG_03268","SJAG_01925","SJAG_04960","SJAG_02166","SJAG_02320","SJAG_00594","SJAG_03011","SJAG_04391","SJAG_03864","SJAG_04044","SJAG_03357","SJAG_03005","SJAG_00938","SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89401,113873],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[98089,113858,95713,84852,110051,86950,110331,114957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[104318,112351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[100713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00594":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of vesicle localisation","type":"exact"}],"termid":"GO:0051650","terms_by_termid":{"GO:0030050":null,"GO:0047496":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: PBO:0027624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_chromosome_condensation","termid":"PBO:0027624"}


id: GO:0009005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of N-terminal leader sequences from membrane prolipoproteins. Hydrolyzes the terminal bond of Xaa-Xbb-Xbb-Cys, in which Xaa is hydrophobic (preferably Leu), Xbb is often Ser or Ala, Xcc is often Gly or Ala, and the Cys is alkylated on sulfur with a diacylglyceryl group.","definition_xrefs":["EC:3.4.23.36"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase II activity (obsolete GO:0009005)","synonyms":[{"name":"SPase II activity","type":"related"},{"name":"leader peptidase II","type":"related"},{"name":"lipoprotein signal peptidase activity","type":"related"},{"name":"premurein leader proteinase activity","type":"related"},{"name":"premurein-leader peptidase activity","type":"narrow"},{"name":"prolipoprotein signal peptidase activity","type":"related"},{"name":"prolipoprotein-signal peptidase activity","type":"related"},{"name":"signal peptidase II activity","type":"exact"}],"termid":"GO:0009005"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.215","EC:1.1.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: SO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant occurring in the intron, within 10 bases of exon.","definition_xrefs":["sanger:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_intronic_splice_region_variant","synonyms":[{"name":"extended intronic splice region variant","type":"exact"}],"termid":"SO:0001995"}


id: PBO:0041806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 17, pseudogene","termid":"PBO:0041806"}


id: GO:0120331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endothelial tube.","definition_xrefs":["PMID:23239824","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube formation","termid":"GO:0120331"}


id: GO:1903579
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72033,75078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP metabolic process.","definition_xrefs":["PMID:20695849","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"negatively_regulates","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ATP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of ATP metabolic process","type":"exact"},{"name":"down regulation of ATP metabolism","type":"exact"},{"name":"down-regulation of ATP metabolic process","type":"exact"},{"name":"down-regulation of ATP metabolism","type":"exact"},{"name":"downregulation of ATP metabolic process","type":"exact"},{"name":"downregulation of ATP metabolism","type":"exact"},{"name":"inhibition of ATP metabolic process","type":"narrow"},{"name":"inhibition of ATP metabolism","type":"narrow"},{"name":"negative regulation of ATP metabolism","type":"exact"}],"termid":"GO:1903579","terms_by_termid":{"GO:0045820":null}}


id: GO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the retina.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within retina (obsolete GO:0048876)","termid":"GO:0048876"}


id: PBO:0075033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-44","termid":"PBO:0075033"}


id: GO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:jl","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of vacuolar membrane (obsolete GO:0000306)","synonyms":[{"name":"extrinsic to vacuolar membrane","type":"exact"}],"termid":"GO:0000306"}


id: PBO:0087596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; green fluorescent protein (GFP)-fusion protein localizes to the endosome; YLR408C is not an essential gene","termid":"PBO:0087596"}


id: GO:0060185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The opening and spreading out of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear unfolding","termid":"GO:0060185"}


id: FYPO:0003371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:18256290","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to actomyosin contractile ring","termid":"FYPO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to actomyosin contractile ring abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003371"}


id: PBO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASp homolog","termid":"PBO:0002724"}


id: PBO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Pci2 (predicted)","termid":"PBO:0018278"}


id: FYPO:0003825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has two nuclei but no septum, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation","termid":"FYPO:0005689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"inviable binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","synonyms":[{"name":"inviable binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation during vegetative growth","type":"exact"},{"name":"inviable binucleate aseptate cell with cell cycle arrest in mitotic G2 phase before cell separation","type":"related"},{"name":"inviable binucleate aseptate cell with mitotic G2/M phase transition arrest before cell separation","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cytokinesis","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest at G2/M phase transition before cell separation","type":"exact"},{"name":"inviable binucleate cell with mitotic cell cycle arrest at G2/M before division septum assembly","type":"exact"},{"name":"inviable cell with mitotic G2/M arrest after failed cytokinesis","type":"related"},{"name":"inviable cell with nuclear division arrest at G2/M without septation (normal cell length)","type":"exact"},{"name":"lethal; binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"exact"},{"name":"mitotic cell cycle arrest at G2/M before cell separation with inviable binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0003825"}


id: GO:1901796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"}


id: PBO:0041653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 3","termid":"PBO:0041653"}


id: MOD:00341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-methyl-L-isoleucine.","definition_xrefs":["PubMed:11875433","RESID:AA0336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated isoleucine","termid":"MOD:00715"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-methylamino-3-methylpentanoic acid","type":"exact"},{"name":"MOD_RES N-methylisoleucine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-isoleucine","type":"exact"},{"name":"N-methylated L-isoleucine","type":"exact"},{"name":"N-methylisoleucine","type":"exact"},{"name":"NMe1Ile","type":"exact"}],"termid":"MOD:00341"}


id: SO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed resulting in a codon that encodes for a different but similar amino acid. These variants may or may not be deleterious.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"missense_variant","termid":"SO:0001583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_missense_variant","synonyms":[{"name":"conservative missense codon","type":"exact"},{"name":"conservative missense variant","type":"exact"},{"name":"neutral missense codon","type":"related"},{"name":"quiet missense codon","type":"related"}],"termid":"SO:0001585"}


id: PBO:0041963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 6","termid":"PBO:0041963"}


id: PBO:0049054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 53, pseudogene","termid":"PBO:0049054"}


id: PBO:0078853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 1","termid":"PBO:0078853"}


id: GO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nickel ions within a cell.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular nickel ion homeostasis","synonyms":[{"name":"cellular nickel homeostasis","type":"exact"},{"name":"cellular nickel ion homeostasis","type":"exact"}],"termid":"GO:0035785"}


id: PBO:0076030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 26","termid":"PBO:0076030"}


id: MOD:01700
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton to a residue alpha-amnino or alpha-imino group forming an alpha-aminium or alpha-iminium group, respectively.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protonated residue","termid":"MOD:01699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino protonated residue","synonyms":[{"name":"N2H+NRes","type":"exact"}],"termid":"MOD:01700"}


id: PBO:0077995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha constant","termid":"PBO:0077995"}


id: GO:0036361
data:
  {"annotated_genes":["SJAG_04298","SJAG_00036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88647,113503],"is_not":false,"summary":null,"term":"GO:0036361"}]},"cv_name":"molecular_function","definition":"Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"racemase activity, acting on amino acids and derivatives","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036361","terms_by_termid":{"GO:0036361":null}}


id: GO:0075236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of zoospore movement on or near host (obsolete GO:0075236)","termid":"GO:0075236"}


id: PBO:0039513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 1","termid":"PBO:0039513"}


id: PBO:0003383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR checkpoint kinase Rad3","termid":"PBO:0003383"}


id: PBO:0056120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 7","termid":"PBO:0056120"}


id: GO:0006837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transport","termid":"GO:0015844"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"serotonin transport","termid":"GO:0006837"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["PMID:25736836","GOC:TermGenie","GO_REF:0000058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: PBO:0052851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-7","termid":"PBO:0052851"}


id: GO:0102697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + O-beta-D-glucosyl-trans-zeatin = H+ + trans-zeatin-O-glucoside-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trans-zeatin-O-glucoside UDP glycosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4736"],"termid":"GO:0102697"}


id: GO:0072158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a proximal tubule are generated and organized. The proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule morphogenesis","termid":"GO:0072158"}


id: GO:0015291
data:
  {"annotated_genes":["SJAG_04673","SJAG_04905","SJAG_00276","SJAG_03960","SJAG_01872","SJAG_04698","SJAG_00057","SJAG_03608","SJAG_01033","SJAG_03951","SJAG_02463","SJAG_01541","SJAG_03401","SJAG_04714","SJAG_01960","SJAG_02780","SJAG_00547","SJAG_02958","SJAG_00339","SJAG_01183","SJAG_04068","SJAG_00233","SJAG_04136","SJAG_03606","SJAG_03595","SJAG_04241","SJAG_04506","SJAG_00612","SJAG_04028","SJAG_01406","SJAG_04616","SJAG_04406","SJAG_01145","SJAG_02050","SJAG_01059","SJAG_02779","SJAG_00275","SJAG_03820","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85194,89285,92673,113175,89517,108441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015297"},{"annotations":[107081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[99029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[87389,86905,111718,94505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[110344,72181,113348,75414,88674,106837,110351,99159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[87961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[113352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[115118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015398"},{"annotations":[96843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[87390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[88755,94226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[111953,100793,112671,90230,99962,105894,108909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[101869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[106312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[92920,85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[107149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[88247,88241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[108448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[84677,91722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy, not direct ATP coupling. Secondary active transporters include symporters and antiporters.","definition_xrefs":["ISBN:0815340729","PMID:10839820","GOC:mtg_transport","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00233":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01406":null,"SJAG_01541":null,"SJAG_01872":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04136":null,"SJAG_04241":null,"SJAG_04406":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04673":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015290","GO:0015404","GO:0015353","TC:2.A","GO:0015570"],"synonyms":[{"name":"active transporter","type":"broad"},{"name":"coupled carrier","type":"exact"},{"name":"electrochemical potential-driven transporter activity","type":"exact"},{"name":"energizer of outer membrane receptor-mediated transport activity","type":"narrow"},{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"},{"name":"heavy metal ion porter activity","type":"narrow"},{"name":"ion-gradient-driven energizer activity","type":"narrow"},{"name":"multidrug endosomal transmembrane transporter activity","type":"narrow"},{"name":"nitrite/nitrate porter activity","type":"narrow"},{"name":"porter activity","type":"exact"},{"name":"porters","type":"exact"},{"name":"secondary carrier-type facilitators","type":"exact"}],"termid":"GO:0015291","terms_by_termid":{"GO:0005315":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005371":null,"GO:0005452":null,"GO:0005471":null,"GO:0008271":null,"GO:0008506":null,"GO:0010486":null,"GO:0015295":null,"GO:0015297":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015398":null,"GO:0015505":null,"GO:0034216":null,"GO:0071913":null,"GO:0097434":null,"GO:0140987":null}}


id: PBO:0048363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 74","termid":"PBO:0048363"}


id: GO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of receptor activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of receptor activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044511"}


id: PBO:0058921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7a-3","termid":"PBO:0058921"}


id: PBO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0004234"}


id: PBO:0051784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F2","termid":"PBO:0051784"}


id: PBO:0055989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and transmembrane domains 1","termid":"PBO:0055989"}


id: PBO:0049699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUWE1 associated protein modifying stress responses","termid":"PBO:0049699"}


id: RO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a substance and a chemical entity, if the chemical entity is part of the substance, and the chemical entity forms the biologically active component of the substance.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_active_ingredient","synonyms":[{"name":"has active pharmaceutical ingredient","type":"related"},{"name":"has active substance","type":"exact"}],"termid":"RO:0002248"}


id: GO:0015740
data:
  {"annotated_genes":["SJAG_00522","SJAG_01406","SJAG_02011","SJAG_00671","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[97823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[114577,91202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"},{"annotations":[84642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"},{"annotations":[63919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902356"},{"annotations":[97826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"},{"annotations":[97827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071422"}]},"cv_name":"biological_process","definition":"The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"C4-dicarboxylate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015740","terms_by_termid":{"GO:0070778":null,"GO:0071422":null,"GO:0071423":null,"GO:0098714":null,"GO:0098720":null,"GO:1902356":null,"GO:1990555":null}}


id: PBO:0012020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal5h2 (predicted)","termid":"PBO:0012020"}


id: GO:0007515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the lymph gland over time, from its formation to the mature structure. The lymph gland is a small bean-shaped organ made up of a loose meshwork of reticular tissue in which are enmeshed large numbers of lymphocytes, macrophages and accessory cells. Lymph glands are located along the lymphatic system.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete lymph gland development (obsolete GO:0007515)","synonyms":[{"name":"lymph gland development","type":"exact"}],"termid":"GO:0007515"}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: PBO:0034294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visited_by","termid":"PBO:0034294"}


id: GO:0019099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a female organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"female sex determination","termid":"GO:0030237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line sex determination","secondary_identifiers":["GO:0007544"],"synonyms":[{"name":"sex determination, female germ-line determination","type":"exact"}],"termid":"GO:0019099"}


id: PBO:0004459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein (predicted)","termid":"PBO:0004459"}


id: GO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol, across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transport","synonyms":[{"name":"glucosylglycerol transport","type":"broad"}],"termid":"GO:0051475"}


id: PBO:0029698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_multiseptate_vegetative_cell","termid":"PBO:0029698"}


id: PBO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 4","termid":"PBO:0042446"}


id: PBO:0029004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_S_phase_progression","termid":"PBO:0029004"}


id: GO:1901940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-exo-alpha-bergamotene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"(-)-exo-alpha-bergamotene metabolic process","termid":"GO:1901938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene biosynthetic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene anabolism","type":"exact"},{"name":"(-)-exo-alpha-bergamotene biosynthesis","type":"exact"},{"name":"(-)-exo-alpha-bergamotene formation","type":"exact"},{"name":"(-)-exo-alpha-bergamotene synthesis","type":"exact"}],"termid":"GO:1901940"}


id: GO:0003391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an amphid sensory organ's neuronal dendrite over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"},{"relation_name":"part_of","term_name":"neuron development involved in amphid sensory organ development","termid":"GO:0003388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}


id: PBO:0076760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDH antisense RNA 1","termid":"PBO:0076760"}


id: GO:1904662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1716172","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"regulation of sensory perception of bitter taste","termid":"GO:1904660"},{"relation_name":"positively_regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory perception of bitter taste","synonyms":[{"name":"activation of bitter taste perception","type":"narrow"},{"name":"activation of sensory perception of bitter taste","type":"narrow"},{"name":"positive regulation of bitter taste perception","type":"exact"},{"name":"up regulation of bitter taste perception","type":"exact"},{"name":"up regulation of sensory perception of bitter taste","type":"exact"},{"name":"up-regulation of bitter taste perception","type":"exact"},{"name":"up-regulation of sensory perception of bitter taste","type":"exact"},{"name":"upregulation of bitter taste perception","type":"exact"},{"name":"upregulation of sensory perception of bitter taste","type":"exact"}],"termid":"GO:1904662"}


id: PBO:0052164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 12","termid":"PBO:0052164"}


id: PBO:0045680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1","termid":"PBO:0045680"}


id: GO:0032943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell proliferation","synonyms":[{"name":"PBMC proliferation","type":"narrow"},{"name":"peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032943"}


id: PBO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cds1/Rad53/Chk2 family protein kinase Mek1","termid":"PBO:0002892"}


id: PBO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 6","termid":"PBO:0052705"}


id: PBO:0078299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-4","termid":"PBO:0078299"}


id: PBO:0040107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 2","termid":"PBO:0040107"}


id: PBO:0073721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAIN motif family member 1","termid":"PBO:0073721"}


id: GO:0043905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ser-tRNA(Thr).","definition_xrefs":["GOC:jl","PMID:15240874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0140098","GO:0140101","GO:0016788"],"is_obsolete":false,"name":"L-seryl-tRNA(Thr) hydrolase activity","synonyms":[{"name":"Ser-tRNA(Thr) hydrolase activity","type":"exact"},{"name":"Ser-tRNAThr hydrolase activity","type":"exact"}],"termid":"GO:0043905"}


id: PBO:0047434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 5","termid":"PBO:0047434"}


id: PBO:0088399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L14","termid":"PBO:0088399"}


id: GO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactarate, the anion of galactaric acid.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"galactarate catabolic process","secondary_identifiers":["MetaCyc:GALACTARDEG-PWY","GO:0019582"],"synonyms":[{"name":"D-galactarate breakdown","type":"related"},{"name":"D-galactarate catabolic process","type":"related"},{"name":"D-galactarate catabolism","type":"related"},{"name":"D-galactarate degradation","type":"related"},{"name":"galactarate breakdown","type":"exact"},{"name":"galactarate catabolism","type":"exact"},{"name":"galactarate degradation","type":"exact"}],"termid":"GO:0046392"}


id: PR:O94257
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine carboxyl methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.08c","secondary_identifiers":["UniProtKB:O94257"],"synonyms":[{"name":"Spom972h-LCMT1","type":"exact"},{"name":"[Phosphatase 2A protein]-leucine-carboxy methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein phosphatase methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94257"}


id: PBO:0065894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB40A, member RAS oncogene family","termid":"PBO:0065894"}


id: FYPO:0004235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels vary over the course of the mitotic cell cycle normally (i.e. levels are indistinguishable from wild type at any assayed point). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:21118960","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"normal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"normal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"normal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004235"}


id: PBO:0077372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM109 divergent transcript","termid":"PBO:0077372"}


id: GO:0018686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 6-hydroxypseudooxynicotine + O2 = 2 2,6-dihydroxypseudooxynicotine.","definition_xrefs":["UM-BBD_reactionID:r0480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-hydroxy pseudo-oxynicotine monooxygenase activity","termid":"GO:0018686"}


id: PBO:0036041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036041"}


id: GO:0014023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural rod formation","termid":"GO:0014023"}


id: GO:0075032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"modulation of formation of symbiont germ tube hook structure for appressorium development","termid":"GO:0075030"},{"relation_name":"negatively_regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"negative regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"},{"name":"negative regulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"negative regulation of symbiont germ tube hook structure formation on or near host","type":"related"}],"termid":"GO:0075032"}


id: GO:0015159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}


id: GO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear outer membrane (obsolete GO:0031309)","synonyms":[{"name":"integral to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031309"}


id: PBO:0054543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1943","termid":"PBO:0054543"}


id: GO:0102119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A20 + S-adenosyl-L-methionine = gibberellin A20 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"gibberellin A20 carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11360"],"termid":"GO:0102119"}


id: PBO:0073201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3B","termid":"PBO:0073201"}


id: PBO:0061163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 1-1","termid":"PBO:0061163"}


id: PBO:0040830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 6","termid":"PBO:0040830"}


id: GO:0018623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + NADH + H+ + O2 = catechol + CO2 + NAD+.","definition_xrefs":["EC:1.14.12.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"benzoate 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0154","MetaCyc:BENZOATE-12-DIOXYGENASE-RXN","RHEA:12633"],"synonyms":[{"name":"benzoate dioxygenase activity","type":"related"},{"name":"benzoate hydroxylase activity","type":"related"},{"name":"benzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"},{"name":"benzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating, decarboxylating)","type":"related"},{"name":"benzoic hydroxylase activity","type":"related"}],"termid":"GO:0018623"}


id: GO:0060365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the coronal suture is generated and organized.","definition_xrefs":["GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronal suture morphogenesis","termid":"GO:0060365"}


id: GO:0015448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type III protein (virulence-related) secretor activity (obsolete GO:0015448)","synonyms":[{"name":"type III protein (virulence-related) secretor activity","type":"exact"}],"termid":"GO:0015448"}


id: PR:Q9UUE7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc73 gene.","definition_xrefs":["UniProtKB:Q9UUE7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.02c","synonyms":[{"name":"Spom972h-cdc73","type":"exact"}],"termid":"PR:Q9UUE7"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: GO:0035254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glutamate receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glutamate receptor binding","termid":"GO:0035254"}


id: GO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + ceramide = ADP + ceramide-1-phosphate.","definition_xrefs":["EC:2.7.1.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ceramide kinase activity","secondary_identifiers":["Reactome:R-HSA-1638845","MetaCyc:CERAMIDE-KINASE-RXN","RHEA:17929"],"synonyms":[{"name":"ATP:ceramide 1-phosphotransferase activity","type":"related"},{"name":"acylsphingosine kinase activity","type":"related"}],"termid":"GO:0001729"}


id: PBO:0062566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AE member 3 pseudogene","termid":"PBO:0062566"}


id: GO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in replicative cell aging (obsolete GO:0001307)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001307"}


id: PR:Q9HFE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP16F5.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol-specific monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.08c","synonyms":[{"name":"Spom972h-SPBP16F5.08c","type":"exact"},{"name":"flavin-dependent monooxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE4"}


id: MOD:01076
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:00414. Remap to MOD:00414.","definition_xrefs":["DeltaMass:215"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01076 N-methyl arginyl (obsolete MOD:01076)","termid":"MOD:01076"}


id: PBO:0049691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid oxidase 1","termid":"PBO:0049691"}


id: PBO:0027954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxal_kinase_activity","termid":"PBO:0027954"}


id: GO:0004344
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + acceptor = D-glucono-1,5-lactone + reduced acceptor.","definition_xrefs":["PMID:22027299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glucose dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.99.35","GO:0008708","RHEA:24540"],"synonyms":[{"name":"glucose dehydrogenase (acceptor) activity","type":"exact"},{"name":"soluble glucose dehydrogenase","type":"exact"}],"termid":"GO:0004344","terms_by_termid":{"GO:0047935":null}}


id: PBO:0039315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase","termid":"PBO:0039315"}


id: RO:HOM0000048
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes that experienced duplications more recent than the species split that created them.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_many_to_many_homology_relationship_with","termid":"RO:HOM0000036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_many_to_many_orthology_relationship_with","synonyms":[{"name":"co-orthology","type":"related"},{"name":"many to many orthologous to","type":"exact"},{"name":"many-to-many orthology","type":"exact"},{"name":"many:many orthology","type":"exact"},{"name":"trans-homology","type":"related"},{"name":"trans-orthology","type":"exact"}],"termid":"RO:HOM0000048"}


id: PBO:0089975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucan synthase adaptor protein Smi1","termid":"PBO:0089975"}


id: GO:0032154
data:
  {"annotated_genes":["SJAG_04668","SJAG_02222","SJAG_04358","SJAG_03915","SJAG_04509","SJAG_00514","SJAG_02572","SJAG_01114","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84114,86062,88578,95917,102265,103211,111969],"is_not":false,"summary":null,"term":"GO:0032154"},{"annotations":[84221,87465],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090689"}]},"cv_name":"cellular_component","definition":"The cleavage furrow is a plasma membrane invagination at the cell division site. The cleavage furrow begins as a shallow groove and eventually deepens to divide the cytoplasm.","definition_xrefs":["ISBN:0805319409","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_02222":null,"SJAG_02572":null,"SJAG_03915":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04668":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cleavage furrow","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cleavage_furrow"],"termid":"GO:0032154","terms_by_termid":{"GO:0032154":null,"GO:0090689":null}}


id: PBO:0071809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 4","termid":"PBO:0071809"}


id: PBO:0061571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 3","termid":"PBO:0061571"}


id: PBO:0005746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate dioxygenase (predicted)","termid":"PBO:0005746"}


id: GO:0048211
data:
  {"annotated_genes":["SJAG_01633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91737],"is_not":false,"summary":null,"term":"GO:0048211"}]},"cv_name":"biological_process","definition":"The initial attachment of a Golgi transport vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the Golgi vesicle and the target membrane.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0140056","GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle docking with target membrane","type":"exact"},{"name":"Golgi vesicle to membrane docking","type":"exact"},{"name":"Golgi-derived vesicle docking","type":"exact"},{"name":"dictyosome vesicle docking to target membrane","type":"narrow"}],"termid":"GO:0048211","terms_by_termid":{"GO:0048211":null}}


id: GO:0008493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tetracycline from one side of a membrane to the other. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tetracycline transmembrane transporter activity","synonyms":[{"name":"tetracyclin transporter activity","type":"exact"},{"name":"tetracycline transporter activity","type":"related"}],"termid":"GO:0008493"}


id: PBO:0047756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate hydrolase 1","termid":"PBO:0047756"}


id: FYPO:0001774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to eisosome filament","synonyms":[{"name":"abnormal protein localisation to eisosome filament","type":"exact"},{"name":"abnormal protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abnormal protein localization to linear eisosome","type":"exact"}],"termid":"FYPO:0001774"}


id: FYPO:0000763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cadmium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to cadmium","synonyms":[{"name":"resistance to cadmium during mitotic cell cycle","type":"related"},{"name":"resistance to cadmium during vegetative growth","type":"exact"},{"name":"resistance to cadmium ion","type":"exact"},{"name":"resistance to cadmium ions","type":"exact"},{"name":"resistant to cadmium","type":"exact"}],"termid":"FYPO:0000763"}


id: PBO:0064440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 2","termid":"PBO:0064440"}


id: GO:0006738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide riboside metabolic process","termid":"GO:0046495"},{"relation_name":"is_a","term_name":"pyridine nucleoside catabolic process","termid":"GO:0070638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nicotinamide riboside catabolic process","synonyms":[{"name":"N-ribosylnicotinamide catabolic process","type":"exact"},{"name":"nicotinamide riboside breakdown","type":"exact"},{"name":"nicotinamide riboside catabolism","type":"exact"},{"name":"nicotinamide riboside degradation","type":"exact"}],"termid":"GO:0006738"}


id: PBO:0089061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein, possibly be part of SJAG_01450","termid":"PBO:0089061"}


id: GO:0006027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan catabolic process","termid":"GO:0006026"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan catabolic process","synonyms":[{"name":"glycosaminoglycan breakdown","type":"exact"},{"name":"glycosaminoglycan catabolism","type":"exact"},{"name":"glycosaminoglycan degradation","type":"exact"}],"termid":"GO:0006027"}


id: PATO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is the distance between the end of the inserted object and the surface of the object into which it penetrates.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion depth","termid":"PATO:0002207"}


id: GO:0047364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + desulfoglucotropeolin = adenosine 3',5'-diphosphate + glucotropeolin + H+.","definition_xrefs":["EC:2.8.2.24","RHEA:20281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-4606","KEGG_REACTION:R03214"],"synonyms":[{"name":"3'-phosphoadenosine-5'-phosphosulfate:desulfoglucosinolate sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:desulfoglucosinolate sulfotransferase activity","type":"related"},{"name":"PAPS-desulfoglucosinolate sulfotransferase activity","type":"related"},{"name":"desulphoglucosinolate sulphotransferase activity","type":"exact"}],"termid":"GO:0047364"}


id: PBO:0050606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B1 antisense RNA 1","termid":"PBO:0050606"}


id: PBO:0068670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 51, pseudogene","termid":"PBO:0068670"}


id: PBO:0108701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp1","termid":"PBO:0108701"}


id: PBO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_cell_during_nitrogen_starvation","termid":"PBO:0036178"}


id: PBO:0030963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation","termid":"PBO:0030963"}


id: GO:0032822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell proliferation","termid":"GO:0032819"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation involved in immune response","termid":"GO:0032820"},{"relation_name":"positively_regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"activation of natural killer cell proliferation during immune response","type":"narrow"},{"name":"positive regulation of NK cell proliferation during immune response","type":"related"},{"name":"positive regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"stimulation of natural killer cell proliferation during immune response","type":"narrow"},{"name":"up regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"up-regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"upregulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032822"}


id: GO:0009940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amino terminal propeptide, which functions as a sorting signal to sort away the soluble vacuolar protein from Golgi to lytic vacuole via clathrin-coated vesicles.","definition_xrefs":["GOC:sm","PMID:10871276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar sorting signal binding","termid":"GO:0010209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"amino-terminal vacuolar sorting propeptide binding","termid":"GO:0009940"}


id: PBO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member A","termid":"PBO:0047089"}


id: PR:Q9USH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13186:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.03c","secondary_identifiers":["UniProtKB:Q9USH1"],"synonyms":[{"name":"SPCP31B10.03c","type":"related"},{"name":"Spom972h-MED31","type":"exact"},{"name":"cell separation protein sep10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sep10","type":"related"},{"name":"soh1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH1"}


id: FYPO:0001836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to spindle pole body","synonyms":[{"name":"normal protein localisation to spindle pole body","type":"exact"},{"name":"normal protein localization to SPB","type":"exact"}],"termid":"FYPO:0001836"}


id: PBO:0086229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that inhibits Doa4p deubiquitinating activity; contributes to ubiquitin homeostasis by regulating the conversion of free ubiquitin chains to ubiquitin monomers by Doa4p; GFP-fusion protein localizes to endosomes","termid":"PBO:0086229"}


id: PBO:0055869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 1","termid":"PBO:0055869"}


id: GO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a voltage-gated calcium channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of calcium channel activity in another organism","termid":"GO:0044473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044474"}


id: GO:1905045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["PMID:22393241","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"down regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"down-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"downregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"inhibition of Schwann cell proliferation involved in axon regeneration","type":"narrow"}],"termid":"GO:1905045"}


id: PBO:0075549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 1","termid":"PBO:0075549"}


id: PBO:0080722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 transcription factor","termid":"PBO:0080722"}


id: PBO:0004746
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNL3L","termid":"PBO:0004746"}


id: PBO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transporter (predicted)","termid":"PBO:0002336"}


id: PBO:0041049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7","termid":"PBO:0041049"}


id: FYPO:0005671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal in a population that is exposed to methyl methanesulfonate. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septation index","termid":"FYPO:0000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased septation index during cellular response to MMS","type":"exact"},{"name":"increased septation index in response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005671"}


id: PBO:0053896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1181","termid":"PBO:0053896"}


id: GO:1904742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","GOC:BHF","GOC:TermGenie","PMID:24415760","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of telomeric DNA binding","synonyms":[{"name":"regulation of telomere binding","type":"exact"},{"name":"regulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904742"}


id: GO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-based cuticle development (obsolete GO:0007592)","synonyms":[{"name":"protein-based cuticle anabolism","type":"exact"},{"name":"protein-based cuticle biosynthetic process","type":"exact"},{"name":"protein-based cuticle development","type":"exact"},{"name":"protein-based cuticle formation","type":"exact"},{"name":"protein-based cuticle synthesis","type":"exact"}],"termid":"GO:0007592"}


id: PR:G2TRM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.19","synonyms":[{"name":"Spom972h-SPAC11D3.19","type":"exact"}],"termid":"PR:G2TRM3"}


id: PBO:0041457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf71 antisense RNA 1","termid":"PBO:0041457"}


id: GO:0090590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + D-glucosamine(out) = protein histidine + glucosamine-6-phosphate(in).","definition_xrefs":["PMID:8246840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0022857","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-D-glucosamine phosphotransferase system transporter activity","termid":"GO:0090590"}


id: PBO:0056322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K5 antisense RNA 2","termid":"PBO:0056322"}


id: GO:0021816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rearrangements of the microtubule cytoskeleton that result in the extension of a leading process, where this process is involved in the movement of cells along radial glial cells.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","PMID:12626695","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration","termid":"GO:0021815"},{"relation_name":"is_a","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration","termid":"GO:0021816"}


id: GO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A viral factory located in the cytoplasm of a host cell.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"viral factory","termid":"GO:0039713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic viral factory","termid":"GO:0039714"}


id: GO:0045231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a slime layer. A slime layer is an easily removed, diffuse, unorganized layer of extracellular material that surrounds a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"slime layer organization","synonyms":[{"name":"slime layer organisation","type":"exact"},{"name":"slime layer organization and biogenesis","type":"related"}],"termid":"GO:0045231"}


id: GO:0009039
data:
  {"annotated_genes":["SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87633],"is_not":false,"summary":null,"term":"GO:0009039"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: urea + H2O = CO2 + 2 NH3.","definition_xrefs":["EC:3.5.1.5","RHEA:20557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"urease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r0120","MetaCyc:UREASE-RXN"],"synonyms":[{"name":"urea amidohydrolase activity","type":"related"}],"termid":"GO:0009039","terms_by_termid":{"GO:0009039":null}}


id: GO:0072353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular age-dependent response to reactive oxygen species (obsolete GO:0072353)","termid":"GO:0072353"}


id: GO:1990155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Dsc E3 ubiquitin ligase complex, an E3 ubiquitin ligase complex localized to the ER and Golgi membrane.","definition_xrefs":["GOC:mah","PMID:23760507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex assembly","synonyms":[{"name":"Dsc complex assembly","type":"exact"}],"termid":"GO:1990155"}


id: PBO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export adaptor Nmd3","termid":"PBO:0090391"}


id: GO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 3-beta-hydroxy-gibberellin + succinate + CO2.","definition_xrefs":["GOC:kad","EC:1.14.11.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gibberellin 3-beta-dioxygenase activity","secondary_identifiers":["RHEA:10104","MetaCyc:RXN1F-170"],"synonyms":[{"name":"(gibberellin-20),2-oxoglutarate:oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"(gibberrellin-20),2-oxoglutarate: oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"gibberellin 3-beta-hydroxylase activity","type":"related"},{"name":"gibberellin 3beta-dioxygenase activity","type":"related"},{"name":"gibberellin 3beta-hydroxylase activity","type":"related"}],"termid":"GO:0016707"}


id: GO:0050311
data:
  {"annotated_genes":["SJAG_05027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84008],"is_not":false,"summary":null,"term":"GO:0050311"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 oxidized ferredoxin + 3 H2O = sulfite + 3 reduced ferredoxin.","definition_xrefs":["EC:1.8.7.1","MetaCyc:SULFITE-REDUCTASE-FERREDOXIN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","termid":"GO:0016673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfite reductase (ferredoxin) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:23132"],"synonyms":[{"name":"ferredoxin-sulfite reductase activity","type":"related"},{"name":"hydrogen-sulfide:ferredoxin oxidoreductase activity","type":"related"},{"name":"sulphite reductase (ferredoxin) activity","type":"exact"}],"termid":"GO:0050311","terms_by_termid":{"GO:0050311":null}}


id: FYPO:0001216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a SAGA complex onto chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal SAGA complex assembly","synonyms":[{"name":"normal SAGA complex assembly during mitotic cell cycle","type":"related"},{"name":"normal SAGA complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001216"}


id: PBO:0028141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sulfide_absent_from_cell","termid":"PBO:0028141"}


id: GO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a NAD(P)+ to NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","secondary_identifiers":["EC:1.20.1.-"],"termid":"GO:0050499"}


id: GO:0042283
data:
  {"annotated_genes":["SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86582],"is_not":false,"summary":null,"term":"GO:0042283"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Glc(1)Man(9)GlcNAc(2)-PP-Dol.","definition_xrefs":["MetaCyc:RXN-5471","PMID:12480927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:31307","EC:2.4.1.265"],"synonyms":[{"name":"dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase activity","type":"exact"}],"termid":"GO:0042283","terms_by_termid":{"GO:0042283":null}}


id: PBO:0064484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase lambda","termid":"PBO:0064484"}


id: PBO:0046910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E2","termid":"PBO:0046910"}


id: PBO:0049227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 1","termid":"PBO:0049227"}


id: FYPO:0006938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal during cytokinesis.","definition_xrefs":["PomBase:mah","PMID:30709916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cables present in increased numbers","termid":"FYPO:0006027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"actin cables present in increased numbers during cytokinesis","synonyms":[{"name":"actin cables present in increased numbers during cytokinesis during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during cytokinesis during vegetative growth","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers during cytokinesis","type":"exact"},{"name":"increased level of actin cables during cytokinesis","type":"related"},{"name":"more actin cables present during cytokinesis","type":"exact"}],"termid":"FYPO:0006938"}


id: PBO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.4","termid":"PBO:0005492"}


id: PBO:0065108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C beta","termid":"PBO:0065108"}


id: PBO:0063510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5B divergent transcript","termid":"PBO:0063510"}


id: PBO:0070602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 70","termid":"PBO:0070602"}


id: FYPO:0006939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction progresses in a radially asymmetric fashion.","definition_xrefs":["PomBase:mah","PMID:30709916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"asymmetric actomyosin contractile ring contraction","synonyms":[{"name":"asymmetric actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"asymmetric actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"non-concentric actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0006939"}


id: GO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-5-hydroxymethyl-2-methylpyrimidine pyrophosphate + H2O = hydroxymethylpyrimidine phosphate + phosphate + H+.","definition_xrefs":["MetaCyc:RXN0-3543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine diphosphatase activity","secondary_identifiers":["RHEA:27914"],"synonyms":[{"name":"HMP-PP diphosphatase","type":"exact"},{"name":"HMP-PP pyrophosphatase","type":"exact"}],"termid":"GO:0002145"}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: GO:0060926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell development","synonyms":[{"name":"pacemaker cell development","type":"broad"}],"termid":"GO:0060926"}


id: SO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000682 splicing_feature (obsolete SO:0000682)","termid":"SO:0000682"}


id: GO:0000447
data:
  {"annotated_genes":["SJAG_02644","SJAG_04582","SJAG_02547","SJAG_03234","SJAG_02553","SJAG_03952","SJAG_06613","SJAG_01623","SJAG_00965","SJAG_00897","SJAG_03796","SJAG_02250","SJAG_00955","SJAG_04524","SJAG_04916","SJAG_00772","SJAG_04174","SJAG_01551","SJAG_03425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89595,90884,92678,92968,95654,95976,99299,100725,100941,101733,101825,101826,103800,104129,105189,109672,111466,111550,114716],"is_not":false,"summary":null,"term":"GO:0000447"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A2","type":"narrow"}],"termid":"GO:0000447","terms_by_termid":{"GO:0000447":null}}


id: PBO:0081040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 18","termid":"PBO:0081040"}


id: PBO:0075072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 121B","termid":"PBO:0075072"}


id: PBO:0036230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase, pseudogene (4 frameshifts)","termid":"PBO:0036230"}


id: GO:0004347
data:
  {"annotated_genes":["SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99822],"is_not":false,"summary":null,"term":"GO:0004347"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["EC:5.3.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:11816","Reactome:R-HSA-70475","Reactome:R-HSA-70471","MetaCyc:PGLUCISOM-RXN"],"synonyms":[{"name":"D-glucose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"glucose phosphate isomerase activity","type":"related"},{"name":"hexose monophosphate isomerase activity","type":"broad"},{"name":"hexose phosphate isomerase activity","type":"related"},{"name":"hexosephosphate isomerase activity","type":"broad"},{"name":"oxoisomerase activity","type":"related"},{"name":"phosphoglucoisomerase activity","type":"related"},{"name":"phosphoglucose isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphohexose isomerase activity","type":"broad"},{"name":"phosphosaccharomutase activity","type":"broad"}],"termid":"GO:0004347","terms_by_termid":{"GO:0004347":null}}


id: PBO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Fic1","termid":"PBO:0003675"}


id: SO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000760 YAC_clone (obsolete SO:0000760)","termid":"SO:0000760"}


id: GO:0050403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-zeatin + UDP-D-glucose = O-beta-D-glucosyl-trans-zeatin + H+ + UDP.","definition_xrefs":["EC:2.4.1.203","RHEA:23224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-zeatin O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4723","KEGG_REACTION:R02118"],"synonyms":[{"name":"UDP-glucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-zeatin O-glucosyltransferase activity","type":"related"},{"name":"zeatin O-b-D-glucosyltransferase activity","type":"exact"},{"name":"zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"zeatin O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050403"}


id: PBO:0046558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group I member 1","termid":"PBO:0046558"}


id: GO:1902544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["GOC:TermGenie","PMID:15518571","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA N-glycosylase activity (obsolete GO:1902544)","synonyms":[{"name":"regulation of DNA glycosylase activity","type":"exact"},{"name":"regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902544"}


id: PBO:0054054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1396","termid":"PBO:0054054"}


id: GO:0102892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + betanidin = H+ + betanin + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"betanidin 5-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8479"],"termid":"GO:0102892"}


id: PBO:0040119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 6","termid":"PBO:0040119"}


id: GO:0007576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell aging process that results in the nucleolus breaking down into fragments.","definition_xrefs":["GOC:mah","PMID:9271578"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation (obsolete GO:0007576)","synonyms":[{"name":"nucleolar size increase","type":"related"}],"termid":"GO:0007576"}


id: GO:1904798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of core promoter binding.","definition_xrefs":["PMID:22723415","GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of core promoter binding","synonyms":[{"name":"activation of core promoter binding","type":"narrow"},{"name":"up regulation of core promoter binding","type":"exact"},{"name":"up-regulation of core promoter binding","type":"exact"},{"name":"upregulation of core promoter binding","type":"exact"}],"termid":"GO:1904798"}


id: GO:0022877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + fructose(out) = protein histidine + fructose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0003824","GO:0016740","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity","synonyms":[{"name":"fructose PTS transporter activity","type":"exact"}],"termid":"GO:0022877"}


id: GO:0009466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class I cytochrome c (obsolete GO:0009466)","synonyms":[{"name":"class I cytochrome c","type":"exact"}],"termid":"GO:0009466"}


id: GO:0102402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylethyl 6-O-beta-D-xylopyranosyl-beta-D-glucopyranoside + H2O = 2-phenylethanol + 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranose.","definition_xrefs":["EC:3.2.1.149","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"2-phenylethyl 6-O-beta-D-xylopyranosyl-beta-D-glucopyranoside glucosidase (Yabukita) activity","secondary_identifiers":["MetaCyc:RXN-13694"],"termid":"GO:0102402"}


id: GO:0045345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"positively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of MHC class I biosynthetic process","synonyms":[{"name":"activation of MHC class I biosynthetic process","type":"narrow"},{"name":"positive regulation of MHC class I anabolism","type":"exact"},{"name":"positive regulation of MHC class I biosynthesis","type":"exact"},{"name":"positive regulation of MHC class I formation","type":"exact"},{"name":"positive regulation of MHC class I synthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"positive regulation of major histocompatibility complex class I biosynthetic process","type":"exact"},{"name":"stimulation of MHC class I biosynthetic process","type":"narrow"},{"name":"up regulation of MHC class I biosynthetic process","type":"exact"},{"name":"up-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"upregulation of MHC class I biosynthetic process","type":"exact"}],"termid":"GO:0045345"}


id: GO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: choline(out) + Na+(out) = choline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline transmembrane transporter activity","termid":"GO:0015220"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"choline:sodium symporter activity","secondary_identifiers":["RHEA:76443"],"synonyms":[{"name":"sodium/choline symporter activity","type":"exact"}],"termid":"GO:0005307"}


id: PR:O13657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.12c gene.","definition_xrefs":["UniProtKB:O13657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C27B12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.12c","synonyms":[{"name":"Spom972h-SPBC27B12.12c","type":"exact"}],"termid":"PR:O13657"}


id: PBO:0034072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcribed_from","termid":"PBO:0034072"}


id: GO:0008131
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"primary amine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-141200","Reactome:R-HSA-141202","KEGG_REACTION:R02613","KEGG_REACTION:R02529","Reactome:R-HSA-5603108","KEGG_REACTION:R02173","MetaCyc:RXN-9597","MetaCyc:RXN-1401","Reactome:R-HSA-5696146","Reactome:R-HSA-5696183","Reactome:R-HSA-374909","Reactome:R-HSA-141186","GO:0004041","MetaCyc:AMACETOXID-RXN","Reactome:R-HSA-379382","KEGG_REACTION:R01853","RHEA:28186","GO:0008122","MetaCyc:RXN-10817","Reactome:R-HSA-379395","RHEA:16153"],"synonyms":[{"name":"amine oxidase (copper-containing) activity","type":"narrow"},{"name":"amine oxidase activity","type":"broad"},{"name":"primary-amine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0008131","terms_by_termid":{"GO:0003884":null}}


id: PBO:0082878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cu(+2)-transporting P-type ATPase; required for export of copper from the cytosol into an extracytosolic compartment; similar to human proteins involved in Menkes and Wilsons diseases; protein abundance increases in response to DNA replication stress; affects TBSV model (+)RNA virus replication by regulating copper metabolism; human homologs ATP7A and ATP7B both complement yeast null mutant","termid":"PBO:0082878"}


id: PR:Q10227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E12.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2E12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E12.03c","synonyms":[{"name":"Spom972h-SPAC2E12.03c","type":"exact"}],"termid":"PR:Q10227"}


id: PBO:0053374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 299","termid":"PBO:0053374"}


id: PBO:0052716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 8","termid":"PBO:0052716"}


id: GO:0061416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under salt stress. The stress is usually an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:dph","PMID:18667581"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to salt stress (obsolete GO:0061416)","termid":"GO:0061416"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: PBO:0039900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF3 antisense RNA 1","termid":"PBO:0039900"}


id: PBO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity (predicted)","termid":"PBO:0001316"}


id: GO:1990467
data:
  {"annotated_genes":["SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86954],"is_not":false,"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A NuA3 complex that catalyzes the acetylation of Histone H3. In S. cerevisiae, this complex consists of Eaf6p, Nto1p, Sas3p, Taf14p, Yng1p and associates with H3K4me3 using Yng1p.","definition_xrefs":["GOC:rb","PMID:25104842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuA3 histone acetyltransferase complex","termid":"GO:0033100"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"NuA3a histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990467","terms_by_termid":{"GO:1990467":null}}


id: PBO:0079981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 19","termid":"PBO:0079981"}


id: PBO:0066951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 253","termid":"PBO:0066951"}


id: PBO:0045175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A3","termid":"PBO:0045175"}


id: PBO:0029000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_septation","termid":"PBO:0029000"}


id: PBO:0089130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor alpha subunit Srp101","termid":"PBO:0089130"}


id: PBO:0056388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK activated protein kinase 3","termid":"PBO:0056388"}


id: GO:0140738
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of NLRP6, PYCARD/ASC and caspase-1 or caspase-4/caspase-11.","definition_xrefs":["PMID:30674671","PMID:34678144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"NLRP6 inflammasome complex","termid":"GO:0140738"}


id: PBO:0079796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A3 pseudogene 7","termid":"PBO:0079796"}


id: GO:0030640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"polyketide catabolic process","synonyms":[{"name":"polyketide breakdown","type":"exact"},{"name":"polyketide catabolism","type":"exact"},{"name":"polyketide degradation","type":"exact"}],"termid":"GO:0030640"}


id: PBO:0089591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Thi5","termid":"PBO:0089591"}


id: GO:0000465
data:
  {"annotated_genes":["SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103629],"is_not":false,"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 5'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000465","terms_by_termid":{"GO:0000465":null}}


id: PBO:0067371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 472, pseudogene","termid":"PBO:0067371"}


id: GO:0006063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving uronic acid, any monocarboxylic acid formally derived by oxidizing to a carboxyl group the terminal hydroxymethylene group of either an aldose with four or more carbon atoms in the molecule, or of any glycoside derived from such an aldose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"uronic acid metabolic process","synonyms":[{"name":"uronic acid metabolism","type":"exact"}],"termid":"GO:0006063"}


id: PBO:0085540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication","termid":"PBO:0085540"}


id: GO:0033834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + kaempferol = UDP + kaempferol 3-O-beta-D-galactoside.","definition_xrefs":["EC:2.4.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"kaempferol 3-O-galactosyltransferase activity","secondary_identifiers":["RHEA:15709","MetaCyc:2.4.1.234-RXN"],"synonyms":[{"name":"F3GalTase activity","type":"related"},{"name":"UDP-galactose:kaempferol 3-O-beta-D-galactosyltransferase activity","type":"related"}],"termid":"GO:0033834"}


id: GO:0150172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylcholine metabolic process.","definition_xrefs":["GOC:bc","PMID:30074985","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"}


id: PBO:0044938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7-dehydrocholesterol reductase","termid":"PBO:0044938"}


id: GO:0042894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fosmidomycin, a phosphonic acid derivative with potent activity against Gram-negative organisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:12543685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"fosmidomycin transport","termid":"GO:0042894"}


id: PBO:0085311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidate phosphatase, converts phosphatidate to diacylglycerol; App1p, Pah1p, Dpp1p, and Lpp1p are responsible for all the phosphatidate phosphatase activity; component of cortical actin patches; interacts with components of endocytic pathway","termid":"PBO:0085311"}


id: PBO:0058027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3976 host gene","termid":"PBO:0058027"}


id: GO:0046113
data:
  {"annotated_genes":["SJAG_01997","SJAG_05287","SJAG_04297","SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[87955,110242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[113499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01997":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleobase catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase breakdown","type":"exact"},{"name":"nucleobase catabolism","type":"exact"},{"name":"nucleobase degradation","type":"exact"}],"termid":"GO:0046113","terms_by_termid":{"GO:0006145":null,"GO:0006147":null,"GO:0009115":null}}


id: GO:1904881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen sulfide stimulus.","definition_xrefs":["PMID:24012591","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to hydrogen sulfide","termid":"GO:1904880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen sulfide","synonyms":[{"name":"cellular response to dihydridosulfur","type":"exact"},{"name":"cellular response to sulfane","type":"exact"}],"termid":"GO:1904881"}


id: GO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic host cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete host cell microsome (obsolete GO:0044189)","synonyms":[{"name":"host cell microsomal membrane","type":"exact"},{"name":"host cell microsome","type":"exact"}],"termid":"GO:0044189"}


id: GO:1901724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["GOC:TermGenie","PMID:18182616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in kidney development","synonyms":[{"name":"activation of cell proliferation involved in kidney development","type":"narrow"},{"name":"up regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"up-regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"upregulation of cell proliferation involved in kidney development","type":"exact"}],"termid":"GO:1901724"}


id: PBO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium channel Cch1","termid":"PBO:0001701"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: PBO:0087657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; HIR is a nucleosome assembly complex involved in regulation of histone gene transcription; mutants display synthetic defects with subunits of FACT, a complex that allows passage of RNA Pol II through nucleosomes","termid":"PBO:0087657"}


id: GO:0052375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of nitric oxide produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced nitric oxide (obsolete GO:0052375)","synonyms":[{"name":"evasion or tolerance by organism of symbiont nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of symbiont NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by symbiont in response to organism","type":"exact"}],"termid":"GO:0052375"}


id: PBO:0074870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 53B","termid":"PBO:0074870"}


id: PBO:0079133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic stromal lymphopoietin","termid":"PBO:0079133"}


id: FYPO:0004873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 2-oxoglutarate-dependent dioxygenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal 2-oxoglutarate dioxygenase activity","termid":"FYPO:0004871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased 2-oxoglutarate dioxygenase activity","synonyms":[{"name":"decreased 2-oxoglutarate-dependent dioxygenase activity","type":"exact"},{"name":"decreased oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"},{"name":"reduced 2-oxoglutarate dioxygenase activity","type":"exact"}],"termid":"FYPO:0004873"}


id: PBO:0057891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3195","termid":"PBO:0057891"}


id: PBO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase Glt1 (predicted)","termid":"PBO:0001987"}


id: PBO:0028563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028563"}


id: GO:1990457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle involved in the degradation of peroxisome by macropexophagy.","definition_xrefs":["PMID:22536249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"pexophagosome","termid":"GO:1990457"}


id: PBO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 24","termid":"PBO:0071183"}


id: GO:0010621
data:
  {"annotated_genes":["SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97161],"is_not":false,"summary":null,"term":"GO:0010621"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0051179","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription by transcription factor localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of transcription by transcription factor localisation","type":"exact"}],"termid":"GO:0010621","terms_by_termid":{"GO:0010621":null}}


id: PBO:0084656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor succinate dehydrogenase isozyme; participates in oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner; YJL045W has a paralog, SDH1, that arose from the whole genome duplication","termid":"PBO:0084656"}


id: PBO:0085600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; may play an indirect role in fluid-phase endocytosis; protein abundance increases in response to DNA replication stress; SDS24 has a paralog, SDS23, that arose from the whole genome duplication","termid":"PBO:0085600"}


id: PBO:0000594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5-thioadenosine phosphorylase (predicted)","termid":"PBO:0000594"}


id: GO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate embryonic development","termid":"GO:0043009"}


id: PBO:0111381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Llp1","termid":"PBO:0111381"}


id: PBO:0069744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1025, pseudogene","termid":"PBO:0069744"}


id: RO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"precedes","termid":"BFO:0000063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_precedes","termid":"RO:0002090"}


id: PBO:0079052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 8-1","termid":"PBO:0079052"}


id: PBO:0067342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 438, pseudogene","termid":"PBO:0067342"}


id: PBO:0034618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_II_metaphase/anaphase_transition_delay","termid":"PBO:0034618"}


id: GO:0102854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-18:1-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:1-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-18:2-2-18:1-phosphatidylcholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8321"],"termid":"GO:0102854"}


id: PBO:0083119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Topoisomerase III; conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially; DNA catenation/decatenation activity is stimulated by RPA and Sgs1p-Top3p-Rmi1p; involved in telomere stability and regulation of mitotic recombination","termid":"PBO:0083119"}


id: PBO:0043154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 22","termid":"PBO:0043154"}


id: PBO:0013029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf16","termid":"PBO:0013029"}


id: GO:0010894
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of steroid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010894","terms_by_termid":{"GO:0010895":null}}


id: PBO:0090576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23","termid":"PBO:0090576"}


id: GO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of one or more phosphate groups to an actin molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"actin modification","termid":"GO:0030047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin phosphorylation","termid":"GO:0031289"}


id: GO:0007219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Notch on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway","secondary_identifiers":["Wikipedia:Notch_signaling_pathway","GO:0030179"],"synonyms":[{"name":"N signaling pathway","type":"exact"},{"name":"N signalling pathway","type":"exact"},{"name":"Notch receptor signaling pathway","type":"exact"},{"name":"Notch receptor signalling pathway","type":"exact"},{"name":"Notch signalling pathway","type":"exact"},{"name":"Notch-receptor signaling pathway","type":"exact"},{"name":"Notch-receptor signalling pathway","type":"exact"}],"termid":"GO:0007219"}


id: GO:0071430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains pre-microRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071430)","synonyms":[{"name":"pre-microRNA-containing RNP export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071430"}


id: PBO:0045479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 1","termid":"PBO:0045479"}


id: PBO:0091848
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris-Related Protein 2","termid":"PBO:0091848"}


id: GO:0043646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cephalosporin, any of large class of tetracyclic triterpene broad-spectrum antibiotics similar both chemically and in their mode of action to penicillin, first isolated from the culture filtrates of mediterranean fungus acremonium (cephalosporium acremonium), and effective against gram-positive bacteria.","definition_xrefs":["Wikipedia:Cephalosporin","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"cephalosporin metabolic process","termid":"GO:0043645"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"cephalosporin biosynthetic process","termid":"GO:0043646"}


id: GO:0102466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-carotene + 2 NADH + 2 H+ + 2 O2 = (2R,2'R)-dihydroxy-all-trans-beta-carotene + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-carotene 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14019"],"termid":"GO:0102466"}


id: FYPO:0005730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal arginase activity","termid":"FYPO:0005730"}


id: PBO:0087298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA origin-binding and annealing protein; required for initiation of DNA replication; phosphorylated in S phase by cyclin-dependent kinases (Cdks), promoting origin binding, DNA replication and Dpb11p complex formation; component of the preloading complex; binds the Mcm2-7p complex to prevent inappropriate Mcm2-7p interaction with the GINS complex in G1; required for S phase checkpoint; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087298"}


id: MOD:01882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the carbonyl of an amino acid residue at position n with the alpha amino of a glycine residue at position n+2 to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"}


id: PBO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 2 receptor","termid":"PBO:0048703"}


id: PBO:0065906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 2","termid":"PBO:0065906"}


id: GO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of ectoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of primary germ layer","termid":"GO:0001704"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectoderm formation","termid":"GO:0001705"}


id: PBO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1 like","termid":"PBO:0060384"}


id: PBO:0054023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1354","termid":"PBO:0054023"}


id: GO:0006271
data:
  {"annotated_genes":["SJAG_00814","SJAG_02667","SJAG_05239","SJAG_02294","SJAG_00272","SJAG_00729","SJAG_03780","SJAG_01762","SJAG_01823","SJAG_00198","SJAG_03495","SJAG_04183","SJAG_00863","SJAG_05232","SJAG_00618","SJAG_04190","SJAG_02690","SJAG_04210","SJAG_02818","SJAG_01010","SJAG_00884","SJAG_02182","SJAG_00874","SJAG_02908","SJAG_02199","SJAG_04877","SJAG_05197","SJAG_04879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108456],"is_not":false,"summary":null,"term":"GO:0006271"},{"annotations":[111268,91447,103525,111438,91236,103422,85781,91414,100396,108457,101096,109750,109340,108699,98999,103156,105295,106133,90147,111562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[93607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[93608,106135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006272"},{"annotations":[100400,101098,91416,99001,105297,114302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[85782,91448,100401,103157,103527,91417,90149,101099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"},{"annotations":[97668,96807,100326,91238,96771,88744,88833],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication.","definition_xrefs":["ISBN:0815316194","ISBN:071673706X","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA strand elongation involved in DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication elongation","type":"exact"},{"name":"DNA strand elongation during DNA replication","type":"related"}],"termid":"GO:0006271","terms_by_termid":{"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:1902983":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null}}


id: PBO:0074561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 15","termid":"PBO:0074561"}


id: PBO:0043221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Leyden crystal galectin","termid":"PBO:0043221"}


id: PBO:0049385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C6 pseudogene 1","termid":"PBO:0049385"}


id: GO:0048806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genitalia development","synonyms":[{"name":"genital development","type":"exact"}],"termid":"GO:0048806"}


id: GO:0021608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the accessory nerve. This process pertains to the initial formation of a structure from unspecified parts. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:dph","GO_REF:0000021","ISBN:0838580343","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"accessory nerve morphogenesis","termid":"GO:0021607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve formation","synonyms":[{"name":"CN XI biosynthesis","type":"related"},{"name":"CN XI formation","type":"related"}],"termid":"GO:0021608"}


id: PBO:0091698
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae sgt1","termid":"PBO:0091698"}


