# terms

id: GO:0019653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"anaerobic purine nucleobase catabolic process","secondary_identifiers":["MetaCyc:PWY-5497","MetaCyc:PWY-5044","MetaCyc:P164-PWY"],"synonyms":[{"name":"anaerobic purine base catabolic process","type":"exact"},{"name":"anaerobic purine base catabolism","type":"exact"},{"name":"anaerobic purine catabolic process","type":"related"},{"name":"purine base fermentation","type":"exact"},{"name":"purine fermentation","type":"related"}],"termid":"GO:0019653"}


id: GO:0031220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: maltodextrin = glucose-1-phosphate.","definition_xrefs":["PMID:10348846","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"maltodextrin phosphorylase activity","secondary_identifiers":["MetaCyc:RXN-9025","RHEA:29691","MetaCyc:RXN0-5182"],"termid":"GO:0031220"}


id: PBO:0052980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LACTB2 antisense RNA 1","termid":"PBO:0052980"}


id: PBO:0042939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac hypertrophy associated epigenetic regulator 1","termid":"PBO:0042939"}


id: PBO:0002699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor Shf1","termid":"PBO:0002699"}


id: PBO:0110814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type, amino acid sensing","termid":"PBO:0110814"}


id: PBO:0077875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 2","termid":"PBO:0077875"}


id: GO:0002580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002580"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: SO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA between two loop anchor positions that are held in close physical proximity.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"},{"relation_name":"overlaps","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop","synonyms":[{"name":"DNA loop","type":"exact"}],"termid":"SO:0002307"}


id: PBO:0081206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN7 ZNF cluster antisense RNA 1","termid":"PBO:0081206"}


id: PBO:0077699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNKS2 divergent transcript","termid":"PBO:0077699"}


id: PBO:0088615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn11","termid":"PBO:0088615"}


id: GO:0035464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway that is involved in the determination of organismal asymmetry with regard to its left and right halves.","definition_xrefs":["GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor receptor beta signaling pathway involved in determination of left/right asymmetry (obsolete GO:0035464)","synonyms":[{"name":"regulation of TGF-beta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGF-beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:0035464"}


id: PBO:0067834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 136","termid":"PBO:0067834"}


id: PR:O59800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor RBM22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.02c","secondary_identifiers":["UniProtKB:O59800"],"synonyms":[{"name":"Spom972h-RBM22","type":"exact"},{"name":"complexed with cdc5 protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59800"}


id: FYPO:0000361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nucleolar morphology","synonyms":[{"name":"abnormal nucleolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar morphology during vegetative growth","type":"exact"},{"name":"nucleolar morphology: abnormal","type":"related"}],"termid":"FYPO:0000361"}


id: PBO:0030125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphorus_level","termid":"PBO:0030125"}


id: PBO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin binding protein 2","termid":"PBO:0044216"}


id: PBO:0080719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 1","termid":"PBO:0080719"}


id: PBO:0034048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_skeleton","termid":"PBO:0034048"}


id: GO:0015277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ionotropic glutamate receptor activity that exhibits fast gating by glutamate, acts by opening a cation channel permeable to sodium and potassium, and for which kainate is an agonist.","definition_xrefs":["PMID:10049997","PMID:8804111","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ligand-gated sodium channel activity","termid":"GO:0015280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0038023","GO:0022857"],"is_obsolete":false,"name":"kainate selective glutamate receptor activity","termid":"GO:0015277"}


id: PBO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (predicted)","termid":"PBO:0000825"}


id: GO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051941"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of GABA reuptake","type":"exact"},{"name":"regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051947"}


id: PBO:0065104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type II regulatory subunit beta","termid":"PBO:0065104"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: PR:Q04665
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein G(z) subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01051","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein alpha-2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.13c","secondary_identifiers":["UniProtKB:Q04665"],"synonyms":[{"name":"GP2-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GNAZ","type":"exact"}],"termid":"PR:Q04665"}


id: PBO:0048411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 1","termid":"PBO:0048411"}


id: FYPO:0008021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing alanine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:7903653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on alanine nitrogen source","synonyms":[{"name":"decreased growth on alanine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on alanine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with alanine nitrogen source","type":"narrow"},{"name":"reduced cell population growth on alanine nitrogen source","type":"exact"},{"name":"slow cell growth on alanine nitrogen source","type":"narrow"}],"termid":"FYPO:0008021"}


id: PBO:0068153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 460","termid":"PBO:0068153"}


id: PBO:0058430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4800","termid":"PBO:0058430"}


id: FYPO:0002798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001219"},{"relation_name":"is_a","term_name":"abnormal protein degradation during nitrogen starvation","termid":"FYPO:0002796"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation during nitrogen starvation","synonyms":[{"name":"decreased protein catabolic process during nitrogen starvation","type":"exact"},{"name":"decreased protein catabolism during nitrogen starvation","type":"exact"},{"name":"decreased protein degradation during nitrogen depletion","type":"exact"},{"name":"decreased protein degradation during nitrogen deprivation","type":"exact"},{"name":"reduced protein degradation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002798"}


id: PBO:0063901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class X","termid":"PBO:0063901"}


id: PR:P0CT73
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.03","synonyms":[{"name":"Spom972h-rps1101","type":"exact"}],"termid":"PR:P0CT73"}


id: GO:0010616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle adaptation","termid":"GO:0010616"}


id: GO:1990320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXI) chains; type XXI collagen triple helices found in the extracellular matrix component of blood vessel walls and in the cytoplasm of cultured human aortic smooth muscle.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXI trimer","termid":"GO:1990320"}


id: PBO:0081443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300","termid":"PBO:0081443"}


id: PBO:0059711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 19","termid":"PBO:0059711"}


id: PBO:0070730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a","termid":"PBO:0070730"}


id: MOD:01653
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride.","definition_xrefs":["DeltaMass:0","Unimod:139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dansyl chloride derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"Dansyl (Dns)","type":"exact"},{"name":"DansylRes","type":"exact"}],"termid":"MOD:01653"}


id: PATO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000923 relative width (obsolete PATO:0000923)","termid":"PATO:0000923"}


id: PBO:0109393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 21B","termid":"PBO:0109393"}


id: GO:1901522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in cellular response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22840777"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus (obsolete GO:1901522)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"}],"termid":"GO:1901522"}


id: PBO:0031048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation","termid":"PBO:0031048"}


id: GO:0046425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via JAK-STAT.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via JAK-STAT","secondary_identifiers":["GO:2000364","GO:0007262"],"synonyms":[{"name":"STAT protein import into nucleus","type":"narrow"},{"name":"regulation of STAT protein import into nucleus","type":"narrow"},{"name":"regulation of STAT protein nuclear translocation","type":"narrow"}],"termid":"GO:0046425"}


id: GO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar ribonucleoprotein (obsolete GO:0030355)","synonyms":[{"name":"small nucleolar ribonucleoprotein","type":"exact"},{"name":"snoRNP","type":"exact"}],"termid":"GO:0030355"}


id: PBO:0053523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 518","termid":"PBO:0053523"}


id: GO:0044453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nuclear membrane, the envelope that surrounds the nucleus of eukaryotic cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear membrane part (obsolete GO:0044453)","termid":"GO:0044453"}


id: GO:1904257
data:
  {"annotated_genes":["SJAG_00328","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86653,100483],"is_not":false,"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol across the Golgi membrane into the Golgi lumen.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:25732056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosol to Golgi apparatus zinc transport","type":"exact"},{"name":"zinc II ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import into Golgi apparatus","type":"exact"},{"name":"zinc ion import into Golgi membrane","type":"related"},{"name":"zinc(2+) import across Golgi membrane","type":"exact"}],"termid":"GO:1904257","terms_by_termid":{"GO:1904257":null}}


id: GO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a pattern recognition receptor (PRR), and ending with the regulation of a downstream cellular process, e.g. transcription. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species, or damage-associated molecular pattern (DAMPs), endogenous molecules released from damaged cells.","definition_xrefs":["GOC:add","GOC:ar","ISBN:0781735149","PMID:15199967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response-activating signaling pathway","termid":"GO:0002758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"pattern recognition receptor signaling pathway","synonyms":[{"name":"PRR signaling pathway","type":"exact"},{"name":"pathogen receptor signaling pathway","type":"exact"},{"name":"pathogen receptor signalling pathway","type":"exact"}],"termid":"GO:0002221"}


id: GO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + ATP = D-arabinose 5-phosphate + ADP.","definition_xrefs":["EC:2.7.1.54","RHEA:24588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"D-arabinokinase activity","secondary_identifiers":["KEGG_REACTION:R01573","MetaCyc:D-ARABINOKINASE-RXN"],"synonyms":[{"name":"ATP:D-arabinose 5-phosphotransferase activity","type":"related"},{"name":"D-arabinokinase (phosphorylating)","type":"related"}],"termid":"GO:0047814"}


id: GO:1903646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chaperone-mediated protein folding.","definition_xrefs":["GO_REF:0000058","PMID:24375412","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein folding","termid":"GO:1903334"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein folding","termid":"GO:1903644"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated protein folding","synonyms":[{"name":"activation of chaperone-mediated protein folding","type":"narrow"},{"name":"up regulation of chaperone-mediated protein folding","type":"exact"},{"name":"up-regulation of chaperone-mediated protein folding","type":"exact"},{"name":"upregulation of chaperone-mediated protein folding","type":"exact"}],"termid":"GO:1903646"}


id: PBO:0004747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf59","termid":"PBO:0004747"}


id: PR:O74375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.12c","synonyms":[{"name":"Spom972h-SPBC32F12.12c","type":"exact"}],"termid":"PR:O74375"}


id: PBO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_methyltransferase_activity","termid":"PBO:0035940"}


id: PBO:0005419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vigilin (predicted)","termid":"PBO:0005419"}


id: GO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:rn","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acid chemical","synonyms":[{"name":"response to acid","type":"broad"},{"name":"response to acid anion","type":"related"},{"name":"response to oxoanion","type":"related"}],"termid":"GO:0001101"}


id: GO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing margin are generated and organized. The wing margin is a strip of cells in the third instar disc at the boundary between the presumptive dorsal and ventral surfaces of the wing blade.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing margin morphogenesis","synonyms":[{"name":"wing margin morphogenesis","type":"exact"}],"termid":"GO:0008587"}


id: PBO:0003981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog","termid":"PBO:0003981"}


id: GO:0072683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000084","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell extravasation","synonyms":[{"name":"T lymphocyte extravasation","type":"exact"},{"name":"T-cell extravasation","type":"exact"},{"name":"T-lymphocyte extravasation","type":"exact"}],"termid":"GO:0072683"}


id: PBO:0079955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP6NL antisense RNA 1","termid":"PBO:0079955"}


id: GO:0036481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to hydrogen peroxide (H2O2).","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"},{"relation_name":"part_of","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"hydrogen peroxide-induced apoptosis","type":"broad"},{"name":"hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:0036481"}


id: PBO:0076476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 1, ATP binding cassette subfamily B member","termid":"PBO:0076476"}


id: GO:0150179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["GOC:aruk","PMID:30074985","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"}


id: PBO:0057864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3175","termid":"PBO:0057864"}


id: PBO:0028282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028282"}


id: PBO:0073218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6A","termid":"PBO:0073218"}


id: PBO:0018150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated sorting nexin Atg20 (predicted)","termid":"PBO:0018150"}


id: GO:0010017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:lr","GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"cellular response to red or far red light","termid":"GO:0071489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"red or far-red light signaling pathway","synonyms":[{"name":"phytochrome signaling pathway","type":"broad"},{"name":"red or far red light signaling pathway","type":"exact"},{"name":"red or far-red light signal transduction","type":"exact"},{"name":"red or far-red light signalling pathway","type":"exact"},{"name":"red/far red light signaling pathway","type":"exact"}],"termid":"GO:0010017"}


id: FYPO:0006193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mating projection is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal shmoo formation","termid":"FYPO:0000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal shmoo morphology","synonyms":[{"name":"normal conjugation tube morphology","type":"exact"},{"name":"normal mating projection morphology","type":"exact"}],"termid":"FYPO:0006193"}


id: FYPO:0005520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome-dependent ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nucleosome-dependent ATPase activity","termid":"FYPO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abolished nucleosome-dependent ATPase activity","synonyms":[{"name":"nucleosome-dependent ATPase activity abolished","type":"exact"}],"termid":"FYPO:0005520"}


id: GO:0010794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"dolichol biosynthetic process","termid":"GO:0019408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of dolichol biosynthetic process","termid":"GO:0010794"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12172:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: PBO:0063474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 3 pseudogene 1","termid":"PBO:0063474"}


id: PBO:0055070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2487","termid":"PBO:0055070"}


id: GO:0061652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of FAT10 from one protein to another via the reaction X-FAT10 + Y = Y-FAT10 + X, where both the X-FAT10 and Y-FAT10 linkages are thioester bonds between the C-terminal amino acid of FAT10 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAT10 transferase activity","termid":"GO:0019775"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016746","GO:0003674","GO:0019787","GO:0016740"],"is_obsolete":false,"name":"FAT10 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061652"}


id: GO:0030400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A recruiting factor or adaptor molecule associated with the proteasome that activates degradation of specific proteasomal substrates and links them to the degradation machinery; it is not involved in ubiquitination; does not possess proteolytic activity.","definition_xrefs":["PMID:11500370"],"gene_count":0,"genotype_count":0,"name":"obsolete protease substrate recruitment factor activity (obsolete GO:0030400)","synonyms":[{"name":"protease substrate recruitment factor activity","type":"exact"}],"termid":"GO:0030400"}


id: PBO:0030550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histidine_import","termid":"PBO:0030550"}


id: GO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TRAIL production","termid":"GO:0032679"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of TRAIL production","secondary_identifiers":["GO:0045555"],"synonyms":[{"name":"down regulation of TRAIL production","type":"exact"},{"name":"down-regulation of TRAIL production","type":"exact"},{"name":"downregulation of TRAIL production","type":"exact"},{"name":"inhibition of TRAIL production","type":"narrow"},{"name":"negative regulation of TRAIL biosynthetic process","type":"narrow"}],"termid":"GO:0032719"}


id: PBO:0072262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS21 divergent transcript","termid":"PBO:0072262"}


id: GO:1901424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toluene stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to toluene","termid":"GO:1901424"}


id: PBO:0111748
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase C-terminal domain","termid":"PBO:0111748"}


id: PBO:0089561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (Sam37)","termid":"PBO:0089561"}


id: PBO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein Urm1 (predicted)","termid":"PBO:0005054"}


id: PBO:0069392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 652, pseudogene","termid":"PBO:0069392"}


id: PBO:0034665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_stable_microtubule_bundle","termid":"PBO:0034665"}


id: PBO:0051673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 3","termid":"PBO:0051673"}


id: PBO:0030728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actomyosin_contractile_ring_assembly","termid":"PBO:0030728"}


id: PBO:0066089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASA2 intronic transcript 1","termid":"PBO:0066089"}


id: GO:0043532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to angiostatin, a proteolytic product of plasminogen or plasmin containing at least one intact kringle domain, and which is an inhibitor of angiogenesis.","definition_xrefs":["PMID:16043488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"angiostatin binding","termid":"GO:0043532"}


id: GO:1900925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine import.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of glycine import across plasma membrane","termid":"GO:1900923"},{"relation_name":"positively_regulates","term_name":"glycine import across plasma membrane","termid":"GO:1903804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glycine import across plasma membrane","synonyms":[{"name":"activation of glycine import","type":"narrow"},{"name":"positive regulation of glycine import","type":"broad"},{"name":"up regulation of glycine import","type":"exact"},{"name":"up-regulation of glycine import","type":"exact"},{"name":"upregulation of glycine import","type":"exact"}],"termid":"GO:1900925"}


id: GO:0048929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an efferent axon in the posterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in the posterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efferent axon development in a lateral line nerve","termid":"GO:0048894"},{"relation_name":"part_of","term_name":"posterior lateral line nerve development","termid":"GO:0048918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"efferent axon development in posterior lateral line nerve","termid":"GO:0048929"}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: PBO:0027600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027600"}


id: PBO:0091035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem8","termid":"PBO:0091035"}


id: PBO:0083162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene PSK2/YOL045W","termid":"PBO:0083162"}


id: GO:1990931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N6-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N6-methyladenosine as formaldehyde.","definition_xrefs":["PMID:22002720","PMID:26458103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mRNA N6-methyladenosine dioxygenase activity","secondary_identifiers":["RHEA:49520","EC:1.14.11.53"],"synonyms":[{"name":"RNA N6-methyladenosine dioxygenase activity","type":"related"},{"name":"mRNA N(6)-methyladenine demethylase","type":"exact"},{"name":"mRNA N(6)-methyladenosine dioxygenase activity","type":"exact"}],"termid":"GO:1990931"}


id: GO:0097643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with amylin to initiate a change in cell activity.","definition_xrefs":["PMID:12037140","PMID:10871296","GOC:bhm","PMID:18687416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor activity","termid":"GO:0097642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"amylin receptor activity","termid":"GO:0097643"}


id: PBO:0068134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 441","termid":"PBO:0068134"}


id: PATO:0001366
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being small and resembling a point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"punctiform","termid":"PATO:0001366"}


id: PBO:0082378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic zinc-finger protein; similar to human and mouse Kin17 proteins which are chromatin-associated proteins involved in UV response and DNA replication","termid":"PBO:0082378"}


id: GO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = thromboxane A(2).","definition_xrefs":["EC:5.3.99.5","RHEA:17137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thromboxane-A synthase activity","secondary_identifiers":["GO:0008400","Reactome:R-HSA-76500","KEGG_REACTION:R02268","Reactome:R-HSA-5603275","MetaCyc:THROMBOXANE-A-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate isomerase activity","type":"related"},{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate thromboxane-A2-isomerase activity","type":"related"},{"name":"cytochrome P450 CYP5","type":"narrow"},{"name":"thromboxane synthase activity","type":"related"},{"name":"thromboxane synthetase activity","type":"related"}],"termid":"GO:0004796"}


id: PBO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4","termid":"PBO:0090629"}


id: PBO:0082229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, Ub-ligase adaptor for Rsp5p; regulates starvation- and substrate-induced Ub-dependent endocytosis of select plasma membrane localized amino acid transporters, recruiting Rsp5p to its targets; role in basal internalization and turnover of Ste2p, mating and zygote formation; recruits Rsp5p to Ste2p via its 2 PPXY motifs; inhibited by Npr1p-mediated phosphorylation, affecting cytosol and plasma membrane translocation; localization regulated by Rsp5p-dependent ubiquitination","termid":"PBO:0082229"}


id: MOD:01720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01720"}


id: PBO:0075061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-24","termid":"PBO:0075061"}


id: FYPO:0000783
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000783","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0091237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase-like and DUF1989 family protein, implicated in urea metabolism","termid":"PBO:0091237"}


id: PBO:0047256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 241 member A","termid":"PBO:0047256"}


id: PBO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.3","termid":"PBO:0005192"}


id: PBO:0078957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 1-1","termid":"PBO:0078957"}


id: PBO:0076188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 3","termid":"PBO:0076188"}


id: GO:1990612
data:
  {"annotated_genes":["SJAG_01538","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92894,98989],"is_not":false,"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair.","definition_xrefs":["PMID:24947240","GOC:vw","PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane microtubule tethering complex","termid":"GO:0034993"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Sad1-Kms1 LINC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990612","terms_by_termid":{"GO:1990612":null}}


id: PBO:0049053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 52","termid":"PBO:0049053"}


id: GO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-26 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-26 receptor activity","synonyms":[{"name":"IL-26 receptor activity","type":"exact"},{"name":"IL-26R","type":"exact"}],"termid":"GO:0045508"}


id: GO:0099555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of nitric oxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide, modulating synaptic transmission","termid":"GO:0099555"}


id: GO:0031515
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97132,108331],"is_not":false,"summary":null,"term":"GO:0031515"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 1-methyladenosine (m1A) in tRNA. In yeast, it is a heterotetramer of two subunits, Gcd10p and Gcd14p, while in bacteria and archaea it is a homotetramer.","definition_xrefs":["PMID:10779558","PMID:14739239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031515","terms_by_termid":{"GO:0031515":null}}


id: PBO:0077648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8","termid":"PBO:0077648"}


id: PBO:0088153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Verprolin, proline-rich actin-associated protein; involved in cytoskeletal organization and cytokinesis; promotes actin nucleation and endocytosis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP)","termid":"PBO:0088153"}


id: PBO:0110988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF34 family, possible chaperone or insertase (PMID: 34572495)","termid":"PBO:0110988"}


id: PBO:0051732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 1","termid":"PBO:0051732"}


id: PBO:0090522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Got1","termid":"PBO:0090522"}


id: PBO:0036544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase Met1","termid":"PBO:0036544"}


id: GO:0051712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"positively_regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of killing of cells of another organism","secondary_identifiers":["GO:0052518","GO:0052330","GO:0052388","GO:0052501","GO:0052529"],"synonyms":[{"name":"activation by organism of apoptotic programmed cell death in other organism during symbiotic interaction","type":"related"},{"name":"activation of killing of cells of another organism","type":"narrow"},{"name":"enhancement of other organism programmed cell death by organism","type":"related"},{"name":"positive regulation of killing of cells of other organism","type":"exact"},{"name":"stimulation of killing of cells of another organism","type":"narrow"},{"name":"up regulation of killing of cells of another organism","type":"exact"},{"name":"up-regulation of killing of cells of another organism","type":"exact"},{"name":"upregulation of killing of cells of another organism","type":"exact"}],"termid":"GO:0051712"}


id: GO:0048814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite morphogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"regulates","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite morphogenesis","termid":"GO:0048814"}


id: PR:000027715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spi1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:18422602","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1","synonyms":[{"name":"SPI1","type":"related"},{"name":"spi1","type":"exact"}],"termid":"PR:000027715"}


id: PBO:0091529
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RHO1","termid":"PBO:0091529"}


id: PBO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell","termid":"PBO:0030367"}


id: PR:Q10336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp6 gene.","definition_xrefs":["UniProtKB:Q10336","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.06c","synonyms":[{"name":"Spom972h-mcp6","type":"exact"},{"name":"horsetail movement protein hrs1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 3 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10336"}


id: PBO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIG4 syndrome","termid":"PBO:0005211"}


id: FYPO:0003932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an exonucleolytic RNA catabolic process that proceeds in the 5' to 3' direction to degrade mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0034428","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear mRNA catabolic process","termid":"FYPO:0002939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process","synonyms":[{"name":"normal 5'-3' exonucleolytic nuclear-transcribed mRNA catabolic process","type":"exact"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'","type":"exact"}],"termid":"FYPO:0003932"}


id: GO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP-D-glucose = beta-D-glucosyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP.","definition_xrefs":["EC:2.4.1.188","MetaCyc:2.4.1.188-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphoundecaprenol glucosyltransferase activity","secondary_identifiers":["RHEA:20952"],"synonyms":[{"name":"UDP-D-glucose:N-acetylglucosaminyl pyrophosphorylundecaprenol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-acetylglucosaminylpyrophosphorylundecaprenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047245"}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: PBO:0057991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3915","termid":"PBO:0057991"}


id: GO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the plasma membrane-derived thylakoid, containing either both large and small subunits or just small subunits. It carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatophore ribulose bisphosphate carboxylase complex","termid":"GO:0048494"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"},{"name":"plasma membrane ribulose bisphosphate carboxylase complex","type":"exact"},{"name":"ribulose bisphosphate carboxylase complex","type":"broad"}],"termid":"GO:0048493"}


id: PBO:0068906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 148, pseudogene","termid":"PBO:0068906"}


id: PBO:0046790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ezrin","termid":"PBO:0046790"}


id: GO:0140157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an ammonium ion from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMID:16999738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium transmembrane transport","termid":"GO:0072488"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"ammonium import across plasma membrane","termid":"GO:0140157"}


id: GO:0030033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus organization","termid":"GO:0032528"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microvillus assembly","synonyms":[{"name":"microvillus biogenesis","type":"related"}],"termid":"GO:0030033"}


id: PBO:0027312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_5'_deoxyribonuclease_(pyrimidine_dimer)_activity","termid":"PBO:0027312"}


id: PBO:0050983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 52","termid":"PBO:0050983"}


id: PBO:0077767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 3","termid":"PBO:0077767"}


id: PBO:0090245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase inhibitor and disassembly protein linked to MTOR","termid":"PBO:0090245"}


id: GO:0048893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an afferent axon in a lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the afferent axons in any lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon development","termid":"GO:0061564"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"afferent axon development in lateral line nerve","termid":"GO:0048893"}


id: PR:O75006
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O75006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.01","synonyms":[{"name":"Spom972h-sec15","type":"exact"}],"termid":"PR:O75006"}


id: GO:0006216
data:
  {"annotated_genes":["SJAG_03771","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85409,104558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine metabolic process","termid":"GO:0046087"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside catabolic process","termid":"GO:0046133"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"cytidine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytidine breakdown","type":"exact"},{"name":"cytidine catabolism","type":"exact"},{"name":"cytidine degradation","type":"exact"}],"termid":"GO:0006216","terms_by_termid":{"GO:0009972":null}}


id: PBO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-trimethylguanosine cap","termid":"PBO:0034716"}


id: MOD:00502
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three hydrogen atoms of a residue with three iodine atoms.","definition_xrefs":["OMSSA:116","PubMed:2026710","PubMed:15627961","Unimod:131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated residue","termid":"MOD:00755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triiodinated residue","synonyms":[{"name":"I3Res","type":"exact"},{"name":"Triiodo","type":"related"},{"name":"tri-Iodination","type":"related"},{"name":"triiodinationy","type":"exact"}],"termid":"MOD:00502"}


id: PBO:0091715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PSMC1","termid":"PBO:0091715"}


id: FYPO:0007304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short bipolar mitotic spindle","termid":"FYPO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002399","FYPO:0000120","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"short bipolar mitotic spindle during anaphase","synonyms":[{"name":"decreased mitotic spindle length during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase","type":"exact"},{"name":"short mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"short mitotic spindles during anaphase","type":"exact"},{"name":"short spindle during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007304"}


id: GO:2001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"positively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"positive regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"positive regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001196"}


id: GO:0045853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"negative regulation of intracellular mRNA localization","termid":"GO:1904581"},{"relation_name":"negatively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bicoid mRNA localization","synonyms":[{"name":"down regulation of bicoid mRNA localization","type":"exact"},{"name":"down-regulation of bicoid mRNA localization","type":"exact"},{"name":"downregulation of bicoid mRNA localization","type":"exact"},{"name":"inhibition of bicoid mRNA localization","type":"narrow"},{"name":"negative regulation of bicoid mRNA localisation","type":"exact"}],"termid":"GO:0045853"}


id: PBO:0087014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleoprotein that contains two RNA recognition motifs (RRM); RNP1 has a paralog, SBP1, that arose from the whole genome duplication","termid":"PBO:0087014"}


id: PBO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 3 (predicted)","termid":"PBO:0000350"}


id: GO:0071902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"}


id: FYPO:0001108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutathione-disulfide reductase activity","termid":"FYPO:0001106"},{"relation_name":"is_a","term_name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"increased glutathione-disulfide reductase activity","synonyms":[{"name":"increased glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001108"}


id: PBO:0061878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 2","termid":"PBO:0061878"}


id: PBO:0003780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine transporter Can1","termid":"PBO:0003780"}


id: FYPO:0004581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter is increased.","definition_xrefs":["GO:0007329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"},{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased transcriptional response to pheromone","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004581"}


id: PBO:0001171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Isoleucine","termid":"PBO:0001171"}


id: GO:0075012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of germ tube formation","termid":"GO:0075010"},{"relation_name":"negatively_regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ tube formation","synonyms":[{"name":"negative regulation of germ tube formation on or near host","type":"exact"}],"termid":"GO:0075012"}


id: GO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + vitexin 2''-O-beta-L-rhamnoside = S-adenosyl-L-homocysteine + 7-O-methylvitexin 2''-O-beta-L-rhamnoside.","definition_xrefs":["EC:2.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"vitexin 2''-O-rhamnoside 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4981","RHEA:11432"],"synonyms":[{"name":"S-adenosyl-L-methionine:vitexin-2''-O-beta-L-rhamnoside 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033801"}


id: PATO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the middle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved medial","termid":"PATO:0002164"}


id: PBO:0042658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 7","termid":"PBO:0042658"}


id: PBO:0065496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMG3 pseudogene 1","termid":"PBO:0065496"}


id: PBO:0003101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor, cytoplasmic nucleoporin Gle1","termid":"PBO:0003101"}


id: FYPO:0002652
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115406,115409,115407,115418,115421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more intracellular endomembrane system structures than normal. The endomembrane system includes the endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope; in this phenotype, excess plasma membrane does not accumulate, but increased amounts of one or more internal intracellular endomembrane system structures may be present.","definition_xrefs":["PMID:21899677","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system","termid":"FYPO:0002404"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":5,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"excess intracellular endomembrane system present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_01906","SJAG_03940"],"single_locus_genotype_uniquenames":["ned1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","nem2delta"],"synonyms":[{"name":"accumulation of internal endomembrane system structures","type":"exact"},{"name":"excess intracellular endomembrane system present during mitotic cell cycle","type":"related"},{"name":"excess intracellular endomembrane system present during vegetative growth","type":"exact"},{"name":"increased level of intracellular endomembrane system structures","type":"related"},{"name":"intracellular endomembrane system structures present in greater numbers","type":"exact"}],"termid":"FYPO:0002652","terms_by_termid":{"FYPO:0001784":null,"FYPO_EXT:0000001":null}}


id: FYPO:0002956
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[115558,115569,115582,115566,115584,115568,115559,115585,115565,115586,115587,115588,115589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[115561],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_03892"],"name":"abnormal protein localization to nucleus","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050","SJAG_05207","SJAG_04489","SJAG_03892","SJAG_03783","SJAG_01745"],"single_locus_genotype_uniquenames":["vps24delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","cmp7delta","nur1delta","vps4delta","did4delta"],"synonyms":[{"name":"abnormal protein localisation to nucleus","type":"exact"}],"termid":"FYPO:0002956","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0003657":null,"FYPO:0007073":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1900766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of emericellin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"emericellin metabolic process","termid":"GO:1900764"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"emericellin biosynthetic process","synonyms":[{"name":"emericellin biosynthesis","type":"exact"},{"name":"emericellin anabolism","type":"exact"},{"name":"Variecoxanthone B anabolism","type":"related"},{"name":"Variecoxanthone B biosynthesis","type":"related"},{"name":"Variecoxanthone B biosynthetic process","type":"related"},{"name":"Variecoxanthone B formation","type":"related"},{"name":"Variecoxanthone B synthesis","type":"related"},{"name":"emericellin formation","type":"exact"},{"name":"emericellin synthesis","type":"exact"}],"termid":"GO:1900766"}


id: PBO:0085143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that mediates homolog segregation during meiosis I; forms a complex with Lrs4p and then Mam1p at kinetochores; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation","termid":"PBO:0085143"}


id: PBO:0017043
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FEN2","termid":"PBO:0017043"}


id: PBO:0040982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 like 2","termid":"PBO:0040982"}


id: PBO:0054375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1770","termid":"PBO:0054375"}


id: PBO:0110970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 antisense RNA 1","termid":"PBO:0110970"}


id: PR:000027570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:11242054","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.1","termid":"PR:000027569"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"SPAC1834.04","type":"related"},{"name":"Spom-hht1","type":"exact"}],"termid":"PR:000027570"}


id: PBO:0042920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 3","termid":"PBO:0042920"}


id: PBO:0067558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 711, pseudogene","termid":"PBO:0067558"}


id: PBO:0091334
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Z Homolog","termid":"PBO:0091334"}


id: PBO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 42","termid":"PBO:0072513"}


id: PBO:0029827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vacuolated_vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0029827"}


id: PBO:0043369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin associated protein 1","termid":"PBO:0043369"}


id: GO:1901335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone catabolic process","synonyms":[{"name":"lactone breakdown","type":"exact"},{"name":"lactone catabolism","type":"exact"},{"name":"lactone degradation","type":"exact"}],"termid":"GO:1901335"}


id: GO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of new blood vessels as a result of the insertion and extension of lumenal tissue pillars.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intussusceptive angiogenesis","termid":"GO:0002041"}


id: GO:0006158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyadenosine deaminase reaction (obsolete GO:0006158)","synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0006158"}


id: PBO:0056168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal vascular addressin cell adhesion molecule 1","termid":"PBO:0056168"}


id: GO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Covalent attachment of the ubiquitin-like protein NEDD8 (or equivalent protein) to another protein, as a part of NEDD8-dependant protein catabolism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein neddylation during NEDD8 class-dependent protein catabolic process (obsolete GO:0042798)","synonyms":[{"name":"protein neddylation during NEDD8 class-dependent protein breakdown","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolism","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein degradation","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolism","type":"exact"}],"termid":"GO:0042798"}


id: PBO:0045351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DONSON pseudogene 1","termid":"PBO:0045351"}


id: PBO:0003177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25 (predicted)","termid":"PBO:0003177"}


id: GO:0075286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangiospore formation","termid":"GO:0075286"}


id: GO:1905296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:rl","GOC:BHF","PMID:15073157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of neural crest formation","termid":"GO:0090301"},{"relation_name":"is_a","term_name":"negative regulation of neural crest cell differentiation","termid":"GO:1905293"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"negatively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest cell fate specification","synonyms":[{"name":"down regulation of neural crest cell fate specification","type":"exact"},{"name":"down-regulation of neural crest cell fate specification","type":"exact"},{"name":"downregulation of neural crest cell fate specification","type":"exact"},{"name":"inhibition of neural crest cell fate specification","type":"narrow"}],"termid":"GO:1905296"}


id: MOD:00014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-cysteine.","definition_xrefs":["RESID:AA0005","ChEBI:29950","PubMed:7338899","PubMed:6692818","PubMed:1310545","DeltaMass:0","PubMed:15790858","PubMed:3447159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine residue","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"(R)-cysteine","type":"exact"},{"name":"2-amino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-amino-3-mercaptopropionic acid","type":"exact"},{"name":"2-azanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"3-mercapto-L-alanine","type":"exact"},{"name":"Cys","type":"exact"},{"name":"Cysteine (C, Cys)","type":"exact"},{"name":"L-(+)-cysteine","type":"exact"},{"name":"L-cysteine","type":"exact"},{"name":"alpha-amino-beta-mercaptopropanoic acid","type":"exact"},{"name":"alpha-amino-beta-mercaptopropionic acid","type":"exact"},{"name":"alpha-amino-beta-thiolpropionic acid","type":"exact"},{"name":"beta-mercaptoalanine","type":"exact"},{"name":"half-cystine","type":"exact"},{"name":"thioserine","type":"exact"}],"termid":"MOD:00014"}


id: PBO:0075524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E4","termid":"PBO:0075524"}


id: PBO:0080765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X chromosome inactivation center","termid":"PBO:0080765"}


id: PBO:0081712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF630 antisense RNA 1","termid":"PBO:0081712"}


id: PBO:0085267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal 2,4-dienoyl-CoA reductase; auxiliary enzyme of fatty acid beta-oxidation; homodimeric enzyme required for growth and sporulation on petroselineate medium; expression induced during late sporulation and in the presence of oleate","termid":"PBO:0085267"}


id: GO:0031538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin metabolic process","synonyms":[{"name":"down regulation of anthocyanin metabolic process","type":"exact"},{"name":"down-regulation of anthocyanin metabolic process","type":"exact"},{"name":"downregulation of anthocyanin metabolic process","type":"exact"},{"name":"inhibition of anthocyanin metabolic process","type":"narrow"},{"name":"negative regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031538"}


id: PBO:0075996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP3 metalloreductase","termid":"PBO:0075996"}


id: GO:2000990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemicellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"positively_regulates","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemicellulose catabolic process","synonyms":[{"name":"positive regulation of hemicellulose catabolism","type":"exact"}],"termid":"GO:2000990"}


id: PBO:0069176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 430, pseudogene","termid":"PBO:0069176"}


id: PBO:0078081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 2","termid":"PBO:0078081"}


id: FYPO:0002494
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115342,115350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[115345,115341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115547],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[115335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein modification is abnormal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein modification","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551","SJAG_02592","SJAG_03940","SJAG_01787","SJAG_04697"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck1delta","sty1delta","pck2delta","nem2delta","gms1delta"],"termid":"FYPO:0002494","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0074784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 5","termid":"PBO:0074784"}


id: GO:0072032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the S2 portion of the proximal convoluted tubule over time, from its formation to the mature structure. The S2 portion of the tubule is involved in reabsorption of water and sodium chloride.","definition_xrefs":["MA:0002613","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"proximal convoluted tubule development","termid":"GO:0072019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 2 development","synonyms":[{"name":"S2 development","type":"exact"}],"termid":"GO:0072032"}


id: GO:0097480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a synaptic vesicle or vesicles to a specific location.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"synaptic vesicle localization","termid":"GO:0097479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of synaptic vesicle localization","synonyms":[{"name":"establishment of synaptic vesicle localisation","type":"exact"}],"termid":"GO:0097480"}


id: PBO:0049287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 6, pseudogene","termid":"PBO:0049287"}


id: PBO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved GTPase Gpn2 (predicted)","termid":"PBO:0034746"}


id: PBO:0108561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 and Mei2-associated RNA","termid":"PBO:0108561"}


id: PBO:0083114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase IV; undergoes pair-wise interactions with Dnl4p-Lif1p and Rad27p to mediate repair of DNA double-strand breaks by non-homologous end joining (NHEJ); homologous to mammalian DNA polymerase beta","termid":"PBO:0083114"}


id: GO:0042537
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60980,95549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation, or any of its derivatives.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"benzene and derivative metabolic process","type":"exact"},{"name":"benzene and derivative metabolism","type":"exact"},{"name":"benzene-containing compound metabolism","type":"exact"}],"termid":"GO:0042537","terms_by_termid":{"GO:0097052":null}}


id: PBO:0046444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 3","termid":"PBO:0046444"}


id: PBO:0054798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2211","termid":"PBO:0054798"}


id: PBO:0044187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTR9 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0044187"}


id: PBO:0085374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth in response to nutrients and TORC2, a complex that regulates cell-cycle dependent polarization of the actin cytoskeleton; involved in meiosis; TOR2 has a paralog, TOR1, that arose from the whole genome duplication","termid":"PBO:0085374"}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: PBO:0047359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 13","termid":"PBO:0047359"}


id: PBO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 60","termid":"PBO:0071058"}


id: GO:0007476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing are generated and organized. The wing is an appendage modified for flying.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"wing disc morphogenesis","termid":"GO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing morphogenesis","synonyms":[{"name":"wing morphogenesis","type":"exact"}],"termid":"GO:0007476"}


id: PR:O13987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and IPT/TIG repeat-containing protein C26H5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.05","synonyms":[{"name":"Spom972h-mga2","type":"exact"}],"termid":"PR:O13987"}


id: PBO:0069711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 991, pseudogene","termid":"PBO:0069711"}


id: PBO:0017024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 family regulatory subunit Ckb2 (predicted)","termid":"PBO:0017024"}


id: GO:0102728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5alpha)-campestan-3-one + NADP = H+ + campest-4-en-3-one + NADPH.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete campest-4-en-3-one,NADPH:steroid 5alpha-reductase activity (obsolete GO:0102728)","termid":"GO:0102728"}


id: PBO:0075924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 16","termid":"PBO:0075924"}


id: GO:0008385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric protein complex that phosphorylates inhibitory-kappaB (I-kappaB) proteins. The complex is composed of two kinase subunits (alpha and beta) and a regulatory gamma subunit (also called NEMO). In a resting state, NF-kappaB dimers are bound to inhibitory IKB proteins, sequestering NF-kappaB in the cytoplasm. Phosphorylation of I-kappaB targets I-kappaB for ubiquitination and proteasomal degradation, thus releasing the NF-kappaB dimers, which can translocate to the nucleus to bind DNA and regulate transcription.","definition_xrefs":["PMID:12055104","GOC:ma","PMID:20300203","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"IkappaB kinase complex","synonyms":[{"name":"IKK complex","type":"exact"},{"name":"heterotrimeric IKK complex","type":"exact"},{"name":"trimeric IKK complex","type":"exact"}],"termid":"GO:0008385"}


id: GO:0030619
data:
  {"annotated_genes":["SJAG_04497","SJAG_04911","SJAG_05009","SJAG_03983"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87747,94200,106833,109464],"is_not":false,"summary":null,"term":"GO:0030619"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear RNA (U1 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03983":null,"SJAG_04497":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"U1 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030619","terms_by_termid":{"GO:0030619":null}}


id: PBO:0027141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methyltransferase_activity","termid":"PBO:0027141"}


id: FYPO:0002433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and have abnormal cell shape, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population with abnormal cell shape (obsolete FYPO:0002433)","synonyms":[{"name":"inviable, abnormally shaped vegetative cell population","type":"exact"},{"name":"lethal; vegetative cell population with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002433"}


id: GO:2000799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal stem cell differentiation","termid":"GO:2000741"},{"relation_name":"is_a","term_name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"},{"relation_name":"positively_regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amniotic stem cell differentiation","termid":"GO:2000799"}


id: PBO:0039038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 1","termid":"PBO:0039038"}


id: FYECO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron trichloride was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl3","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron trichloride added","type":"exact"},{"name":"iron(III) chloride","type":"exact"}],"termid":"FYECO:0000281"}


id: PR:O60121
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A stomatin-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04040","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.07c","secondary_identifiers":["UniProtKB:O60121"],"synonyms":[{"name":"Spom972h-STOML2","type":"exact"}],"termid":"PR:O60121"}


id: PBO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1M2 pseudogene 1","termid":"PBO:0039652"}


id: SO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element, a few hundred base pairs long, that is dispersed throughout the genome. A common human SINE is the Alu element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINE_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Short_interspersed_nuclear_element"],"synonyms":[{"name":"SINE element","type":"exact"},{"name":"Short interspersed element","type":"exact"},{"name":"Short interspersed nuclear element","type":"exact"}],"termid":"SO:0000206"}


id: PBO:0083035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase; required for biosynthesis of isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; also has a role in tRNA gene-mediated silencing; gene encodes two isozymic forms; converts to a prion form, prion conversion contributes to azole antifungal resistance by upregulating ergosterol biosynthesis; homolog of human TRIT1, a mutation in which is associated with severe combined respiratory chain defects","termid":"PBO:0083035"}


id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: PBO:0043363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain A","termid":"PBO:0043363"}


id: PBO:0068095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 402","termid":"PBO:0068095"}


id: PBO:0012835
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens NRAS","termid":"PBO:0012835"}


id: GO:0002536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus as part of an inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"},{"relation_name":"is_a","term_name":"respiratory burst involved in defense response","termid":"GO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in inflammatory response","synonyms":[{"name":"oxidative burst during acute inflammatory response","type":"broad"},{"name":"production of reactive oxygen species during acute inflammatory response","type":"broad"},{"name":"respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002536"}


id: FYPO:0007384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during a cellular response to oxidative stress.","definition_xrefs":["PMID:28652406","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during cellular response to oxidative stress","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during cellular response to oxidative stress","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during cellular response to oxidative stress","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007384"}


id: PBO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia","termid":"PBO:0001866"}


id: GO:0004307
data:
  {"annotated_genes":["SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89235],"is_not":false,"summary":null,"term":"GO:0004307"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-ethanolamine + 1,2-diacylglycerol = CMP + a phosphatidylethanolamine.","definition_xrefs":["EC:2.7.8.1","RHEA:32943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ethanolaminephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ETHANOLAMINEPHOSPHOTRANSFERASE-RXN","Reactome:R-HSA-1482962"],"synonyms":[{"name":"CDP-ethanolamine:1,2-diacylglycerol ethanolaminephosphotransferase activity","type":"related"},{"name":"CDPethanolamine diglyceride phosphotransferase activity","type":"related"},{"name":"EPT","type":"related"},{"name":"diacylglycerol ethanolaminephosphotransferase activity","type":"related"},{"name":"phosphorylethanolamine-glyceride transferase activity","type":"related"}],"termid":"GO:0004307","terms_by_termid":{"GO:0004307":null}}


id: FYPO:0003344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed when a cell population is in stationary phase in which a cell is elongated, has two or more nuclei and more than one septum, and the septa not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"elongated multinucleate multiseptate cell, single septa between nuclei, during stationary phase","synonyms":[{"name":"elongated multinucleate multiseptate cell, single septa between nuclei during stationary phase","type":"exact"},{"name":"elongated multinucleate multiseptate cell, single septa between nuclei, during stationary phase during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003344"}


id: GO:0097749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane organization process resulting in the formation of a tubular projection. This may face inwardly (as in tubular membrane invaginations) or outwardly (as in endosomal tubules).","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane tubulation","termid":"GO:0097749"}


id: PBO:0086683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology to <i>Ashbya gossypii</i>","termid":"PBO:0086683"}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: PBO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymuconolactone decarboxylase-like protein, Pxp2","termid":"PBO:0089719"}


id: GO:0061674
data:
  {"annotated_genes":["SJAG_16460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92058],"is_not":false,"summary":null,"term":"GO:0061674"}]},"cv_name":"biological_process","definition":"Repair of the gaps in the DNA helix using a discontinuous template during double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"gap filling involved in double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061674","terms_by_termid":{"GO:0061674":null}}


id: PBO:0060289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6","termid":"PBO:0060289"}


id: PBO:0034427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_localization_(obsolete_requires_localization)","termid":"PBO:0034427"}


id: SO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyladenosine","secondary_identifiers":["RNAMOD:003"],"synonyms":[{"name":"N6 methyladenosine","type":"exact"},{"name":"N6-methyladenosine","type":"exact"},{"name":"m6A","type":"exact"}],"termid":"SO:0001297"}


id: FYPO:0005631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of protein degradation during vegetative growth","synonyms":[{"name":"decreased rate of protein breakdown during vegetative growth","type":"exact"},{"name":"decreased rate of protein catabolic process during vegetative growth","type":"exact"},{"name":"decreased rate of protein catabolism during vegetative growth","type":"exact"},{"name":"decreased rate of protein degradation during mitotic cell cycle","type":"related"},{"name":"reduced rate of protein degradation","type":"exact"}],"termid":"FYPO:0005631"}


id: GO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a brassinosteroid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"brassinosteroid binding","termid":"GO:0090411"}


id: PBO:0069694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 973, pseudogene","termid":"PBO:0069694"}


id: PBO:0011510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon Dpb3 (predicted)","termid":"PBO:0011510"}


id: PBO:0071460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 1","termid":"PBO:0071460"}


id: PBO:0053517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 507","termid":"PBO:0053517"}


id: FYPO:0004408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing triplatin tetranitrate (also called BBR 3464).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on triplatin tetranitrate","synonyms":[{"name":"normal cell population growth in presence of triplatin tetranitrate","type":"exact"},{"name":"normal cell population growth on BBR 3464","type":"exact"},{"name":"normal cell population growth on triplatin tetranitrate","type":"exact"},{"name":"normal cellular response to triplatin tetranitrate","type":"related"},{"name":"normal vegetative cell population growth on triplatin tetranitrate","type":"exact"}],"termid":"FYPO:0004408"}


id: PATO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division into symmetrical halves by only one longitudinal plane passing through the axis.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral symmetry","termid":"PATO:0001324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygomorphic","termid":"PATO:0001327"}


id: PBO:0082503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase zeta; involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev7p, Pol31p and Pol32p","termid":"PBO:0082503"}


id: PR:O43015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2G2.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase C2G2.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.17c","synonyms":[{"name":"Spom972h-SPBC2G2.17c","type":"exact"}],"termid":"PR:O43015"}


id: GO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisol stimulus. Cortisol is the major natural glucocorticoid synthesized in the zona fasciculata of the adrenal cortex; it affects the metabolism of glucose, protein, and fats and has appreciable mineralocorticoid activity. It also regulates the immune system and affects many other functions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cortisol","termid":"GO:0051414"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cortisol stimulus","synonyms":[{"name":"cellular response to hydrocortisone stimulus","type":"exact"}],"termid":"GO:0071387"}


id: PBO:0076399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF1A antisense RNA 1","termid":"PBO:0076399"}


id: PBO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana COQ9","termid":"PBO:0036333"}


id: PR:Q9Y7L9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC685.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C685.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.08","synonyms":[{"name":"Spom972h-SPBC685.08","type":"exact"}],"termid":"PR:Q9Y7L9"}


id: GO:0071740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgD immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["ISBN:0781765196","PMID:11282392","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"IgD B cell receptor complex","synonyms":[{"name":"membrane-bound IgD","type":"exact"},{"name":"surface IgD","type":"exact"}],"termid":"GO:0071740"}


id: PBO:0057741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1471","termid":"PBO:0057741"}


id: GO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Ala-Gly bond in repressor lexA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete repressor LexA activity (obsolete GO:0008992)","synonyms":[{"name":"LexA repressor","type":"related"},{"name":"repressor LexA activity","type":"exact"},{"name":"repressor lexA","type":"related"}],"termid":"GO:0008992"}


id: PBO:0013470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl6","termid":"PBO:0013470"}


id: GO:0052212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by one of the organisms, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via secreted substance involved in symbiotic interaction (obsolete GO:0052212)","synonyms":[{"name":"modification of host morphology or physiology via effector molecule","type":"narrow"},{"name":"modification of host morphology or physiology via ellicitor","type":"narrow"},{"name":"modification of morphology or physiology of other organism via secreted substance during symbiotic interaction","type":"related"}],"termid":"GO:0052212"}


id: GO:0042170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a plastid and form the plastid envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid membrane","termid":"GO:0042170"}


id: GO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete urinary protein (obsolete GO:0005192)","synonyms":[{"name":"urinary protein","type":"exact"}],"termid":"GO:0005192"}


id: PBO:0070419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPAP3 divergent transcript","termid":"PBO:0070419"}


id: PBO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Map1","termid":"PBO:0002912"}


id: PBO:0062932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase family member 4 (inactive)","termid":"PBO:0062932"}


id: PR:O94444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10223:SF0","OMA:SCHPO01888","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.10c","secondary_identifiers":["UniProtKB:O94444"],"synonyms":[{"name":"Spom972h-PSMD4","type":"exact"}],"termid":"PR:O94444"}


id: PBO:0046206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 3","termid":"PBO:0046206"}


id: GO:0023030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class Ib molecules via the antigen binding groove.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class Ib protein binding","termid":"GO:0023029"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex binding","termid":"GO:0023025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"MHC class Ib protein binding, via antigen binding groove","termid":"GO:0023030"}


id: GO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminomuconate + H2O + H+ = (Z)-5-oxohex-2-enedioate + NH4.","definition_xrefs":["RHEA:20996","EC:3.5.99.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"2-aminomuconate deaminase activity","secondary_identifiers":["MetaCyc:3.5.99.5-RXN","KEGG_REACTION:R03887"],"synonyms":[{"name":"2-aminomuconate aminohydrolase activity","type":"related"}],"termid":"GO:0050540"}


id: GO:0009017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-succinyl-L-glutamate + H2O = L-glutamate + succinate.","definition_xrefs":["RHEA:15169","EC:3.5.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"succinylglutamate desuccinylase activity","secondary_identifiers":["MetaCyc:SUCCGLUDESUCC-RXN","KEGG_REACTION:R00411"],"synonyms":[{"name":"AstE","type":"related"},{"name":"N-succinyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N2-succinylglutamate desuccinylase activity","type":"exact"},{"name":"SGDS","type":"related"}],"termid":"GO:0009017"}


id: GO:0090736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a meprin and TRAF homology (MATH) domain.","definition_xrefs":["InterPro:IPR002083","PMID:22621901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"MATH domain binding","termid":"GO:0090736"}


id: PBO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI1 antisense RNA 1","termid":"PBO:0045766"}


id: PBO:0053603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 635","termid":"PBO:0053603"}


id: PBO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 18","termid":"PBO:0050691"}


id: PBO:0044523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAB2 interacting protein","termid":"PBO:0044523"}


id: GO:1904726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:23496142","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of replicative senescence","termid":"GO:1904726"}


id: PBO:0049807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 2","termid":"PBO:0049807"}


id: PBO:0041085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain and CAAX motif containing","termid":"PBO:0041085"}


id: PBO:0071928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 5","termid":"PBO:0071928"}


id: PBO:0111382
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentameric","termid":"PBO:0111382"}


id: PBO:0045731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL associated factor 1","termid":"PBO:0045731"}


id: GO:0039711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a helical viral capsid in the cytoplasm. Occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic helical capsid assembly","termid":"GO:0039711"}


id: PBO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 1","termid":"PBO:0060652"}


id: PBO:0034216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-endoparasite_of","termid":"PBO:0034216"}


id: PBO:0080789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC1 N-terminal domain containing 1, N-terminal like","termid":"PBO:0080789"}


id: PBO:0068244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 1","termid":"PBO:0068244"}


id: PATO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of unique homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Monoploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoploid","termid":"PATO:0001376"}


id: PBO:0040137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 3","termid":"PBO:0040137"}


id: SO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of translation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_regulatory_region","synonyms":[{"name":"translation regulatory region","type":"exact"}],"termid":"SO:0001680"}


id: PBO:0038280
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first_approved_timestamp","termid":"PBO:0038280"}


id: GO:1905355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a spine apparatus.","definition_xrefs":["GO_REF:0000079","GOC:PARL","GOC:bf","GOC:TermGenie","PMID:12928494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"spine apparatus assembly","synonyms":[{"name":"dense material assembly","type":"narrow"},{"name":"dense material formation","type":"narrow"},{"name":"spine apparatus formation","type":"exact"}],"termid":"GO:1905355"}


id: PBO:0045072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 4","termid":"PBO:0045072"}


id: PBO:0056349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP6 domain containing 1","termid":"PBO:0056349"}


id: PBO:0029459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology","termid":"PBO:0029459"}


id: GO:1990691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a cis-Golgi-derived vesicle to the lipid bilayer membrane around the medial-Golgi cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["PMID:24119662","GOC:bhm","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cis-Golgi-derived vesicle fusion with Golgi medial cisterna membrane","synonyms":[{"name":"cis-Golgi-derived vesicle fusion with medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990691"}


id: FYPO:0005391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA recombination is increased during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased DNA recombination during cellular response to ionizing radiation","synonyms":[{"name":"increased DNA recombination during cellular response to IR","type":"exact"},{"name":"increased DNA recombination during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased DNA recombination during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased DNA recombination frequency during cellular response to ionizing radiation","type":"related"},{"name":"increased DNA recombination rate during cellular response to ionizing radiation during vegetative growth","type":"related"},{"name":"increased recombination during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005391"}


id: PBO:0062466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 157 pseudogene","termid":"PBO:0062466"}


id: PBO:0072857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcosine dehydrogenase","termid":"PBO:0072857"}


id: SO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The variable region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"V_region","synonyms":[{"name":"INSDC_feature:V_region","type":"exact"},{"name":"V region","type":"exact"}],"termid":"SO:0001833"}


id: GO:0047268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: raffinose + 1-alpha-D-galactosyl-myo-inositol = stachyose + myo-inositol.","definition_xrefs":["MetaCyc:2.4.1.67-RXN","EC:2.4.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"galactinol-raffinose galactosyltransferase activity","secondary_identifiers":["RHEA:20776"],"synonyms":[{"name":"alpha-D-(1->3)-galactosyl-myo-inositol:raffinose galactosyltransferase activity","type":"related"},{"name":"stachyose synthetase activity","type":"related"}],"termid":"GO:0047268"}


id: PBO:0058564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6506","termid":"PBO:0058564"}


id: PBO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.2","termid":"PBO:0000396"}


id: GO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor adaptor protein activity (obsolete GO:0005037)","synonyms":[{"name":"death receptor adaptor protein activity","type":"exact"}],"termid":"GO:0005037"}


id: GO:0007093
data:
  {"annotated_genes":["SJAG_02098","SJAG_02771","SJAG_01084","SJAG_01010","SJAG_02026","SJAG_03695","SJAG_01297","SJAG_03353","SJAG_03160","SJAG_01401","SJAG_04999","SJAG_03681","SJAG_03720","SJAG_00486","SJAG_00082","SJAG_01680","SJAG_00623","SJAG_03602","SJAG_01330","SJAG_01708","SJAG_01082","SJAG_00364","SJAG_01429","SJAG_01210","SJAG_00429","SJAG_03026","SJAG_04126","SJAG_01679","SJAG_01873","SJAG_00327","SJAG_00883","SJAG_02451","SJAG_01677","SJAG_03927","SJAG_01605","SJAG_02336","SJAG_03898","SJAG_02266","SJAG_01044","SJAG_03942","SJAG_02576","SJAG_04259","SJAG_03048","SJAG_00640","SJAG_04884","SJAG_01146","SJAG_03073","SJAG_01837","SJAG_02392","SJAG_01855","SJAG_01205","SJAG_04597","SJAG_04332","SJAG_01076","SJAG_05373","SJAG_00169","SJAG_02563","SJAG_04287","SJAG_04140","SJAG_04280","SJAG_02169","SJAG_00071","SJAG_04699","SJAG_04671","SJAG_02074","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86924,110441,103408,112062,104435,109966,95750,100069,108140],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[96697,90586,86203,97600,112167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[110638,112398,79015,113841,98530,95355,87972,90125,105504,112168,102789,110432,89745,107378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[88711,90148,99495,112226,95356,87613,113415,104016,85333,105505,95522,112963,113250,102790,90126,108214,96698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[105072,112064,97789,98531,85161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[87491,105863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[112169,90716,94609,92030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[110433,84775,107909,105506,87973,97216,113170,87614,85334,96699,90128,102791,113842,86422,95523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[95357,102792,84776,107910,86647,88712,95524,108216,87615,112227,112228,98532,97688,92195,90717,113251,85380,85335,97021,103849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[111710,86926,110670,95599,106096,109970,112835,102486,97965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[90377],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112839],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90378],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"A signaling process that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"mitotic cell cycle 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cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072474","GO:0071780","GO:0072413","GO:0031575","GO:0072456"],"synonyms":[{"name":"mitotic cell cycle checkpoint","type":"exact"},{"name":"mitotic checkpoint","type":"related"},{"name":"signal transduction involved in mitotic G2/M transition checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle G1/S checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0007093","terms_by_termid":{"GO:0007094":null,"GO:0007095":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null,"GO:0044878":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0005511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside diphosphatase Ynd1","termid":"PBO:0005511"}


id: GO:0006753
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id: PR:O74342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1A4.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.11c","synonyms":[{"name":"Spom972h-SPBC1A4.11c","type":"exact"}],"termid":"PR:O74342"}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: PBO:0011410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-axis_of","termid":"PBO:0011410"}


id: GO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal tyrosine of proteins to form the derivative N-acetyl-L-tyrosine.","definition_xrefs":["RESID:AA0053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-tyrosine acetylation","termid":"GO:0018000"}


id: GO:0004741
data:
  {"annotated_genes":["SJAG_03310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84094],"is_not":false,"summary":null,"term":"GO:0004741"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + H2O = L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + phosphate.","definition_xrefs":["EC:3.1.3.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0004721","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:12669","GO:0019906","MetaCyc:3.1.3.43-RXN","Reactome:R-HSA-204169"],"synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase activity","type":"exact"},{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic catalyst activity","type":"exact"},{"name":"pyruvate dehydrogenase (lipoamide) phosphatase activity","type":"exact"}],"termid":"GO:0004741","terms_by_termid":{"GO:0004741":null}}


id: PBO:0080206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VGF nerve growth factor inducible","termid":"PBO:0080206"}


id: PBO:0066526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 2","termid":"PBO:0066526"}


id: PBO:0073493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase 2","termid":"PBO:0073493"}


id: PBO:0057650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-3","termid":"PBO:0057650"}


id: PBO:0054874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2288","termid":"PBO:0054874"}


id: PBO:0048252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin and GMAP prepropeptide","termid":"PBO:0048252"}


id: GO:0015667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA cytosine = S-adenosyl-L-homocysteine + DNA N4-methylcytosine.","definition_xrefs":["EC:2.1.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"site-specific DNA-methyltransferase (cytosine-N4-specific) activity","secondary_identifiers":["RHEA:16857","MetaCyc:2.1.1.113-RXN"],"synonyms":[{"name":"DNA[cytosine-N4]methyltransferase activity","type":"related"},{"name":"N(4)-cytosine-specific DNA methylase activity","type":"related"},{"name":"N4-cytosine-specific DNA methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine 4-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine N4-methyltransferase activity","type":"related"},{"name":"m4C-forming MTase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"}],"termid":"GO:0015667"}


id: GO:0141026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to cholesterol on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23239883","PMID:17557817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane cholesterol","termid":"GO:0141026"}


id: SO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes one or more entire codons from the coding sequence but does not change any remaining codons.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_inframe_deletion","synonyms":[{"name":"conservative decrease in CDS length","type":"related"},{"name":"conservative inframe deletion","type":"exact"}],"termid":"SO:0001825"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: GO:0038167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epidermal growth factor receptor signaling pathway in which the signal transmitted via the activation of the transcription factor NF-kappaB.","definition_xrefs":["PMID:22132240","PMID:21229383","GOC:uh","PMID:21518868","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor signaling pathway via positive regulation of NF-kappaB transcription factor activity (obsolete GO:0038167)","synonyms":[{"name":"EGFR signaling pathway via activation of NF-kappaB","type":"exact"},{"name":"epidermal growth factor receptor signalling pathway via positive regulation of NF-kappaB transcription factor activity","type":"exact"}],"termid":"GO:0038167"}


id: PBO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_plasma_membrane_permeability","termid":"PBO:0036192"}


id: PBO:0090893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-mannosyltransferase Och1","termid":"PBO:0090893"}


id: GO:0015560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (L-idonate or D-gluconate)(out) + H+(out) = (L-iodonate or D-gluconate)(in) + H+(in).","definition_xrefs":["TC:2.A.8.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate/D-gluconate:hydrogen symporter activity (obsolete GO:0015560)","synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"exact"},{"name":"L-idonate/D-gluconate:proton symporter","type":"exact"}],"termid":"GO:0015560"}


id: GO:0015879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"carnitine transport","synonyms":[{"name":"vitamin Bt transport","type":"exact"}],"termid":"GO:0015879"}


id: PBO:0058284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4660","termid":"PBO:0058284"}


id: PBO:0073673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 2","termid":"PBO:0073673"}


id: PBO:0031209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_activation_of_bipolar_cell_growth","termid":"PBO:0031209"}


id: PATO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated purple","synonyms":[{"name":"pale purple","type":"exact"}],"termid":"PATO:0001282"}


id: GO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyroxine (T4) or triiodothyronine (T3), tyrosine-based hormones produced by the thyroid gland.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thyroid hormone binding","synonyms":[{"name":"thyroxine binding","type":"narrow"},{"name":"triiodothyronine binding","type":"narrow"}],"termid":"GO:0070324"}


id: FYPO:0007946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination","termid":"FYPO:0006977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein ubiquitination","termid":"FYPO:0007946"}


id: MOD:01000
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tyrosine residue with one bromine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated tyrosine","termid":"MOD:00988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated tyrosine","synonyms":[{"name":"Br1Tyr","type":"exact"}],"termid":"MOD:01000"}


id: PBO:0073050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 8","termid":"PBO:0073050"}


id: PBO:0005320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Cdc21","termid":"PBO:0005320"}


id: PBO:0087782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087782"}


id: PR:P78860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.15c","secondary_identifiers":["UniProtKB:P78860"],"synonyms":[{"name":"21S rRNA (uridine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ2","type":"exact"}],"termid":"PR:P78860"}


id: PATO:0000999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's successive change from one thing or state to another and back again.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternation","termid":"PATO:0000999"}


id: PBO:0004547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav1","termid":"PBO:0004547"}


id: GO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanin-concentrating hormone, a cyclic peptide hormone that, upon receptor binding, induces melanin aggregation in melanocytes, and is also involved in regulating food intake and energy balance in mammals.","definition_xrefs":["PMID:9792536","GOC:mah","PMID:11416225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0003674","GO:0005488","GO:0098772"],"is_obsolete":false,"name":"melanin-concentrating hormone activity","termid":"GO:0030354"}


id: PR:O13923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crn1 gene.","definition_xrefs":["UniProtKB:O13923","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin-like protein crn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.02","synonyms":[{"name":"Spom972h-crn1","type":"exact"}],"termid":"PR:O13923"}


id: PBO:0069020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 264, pseudogene","termid":"PBO:0069020"}


id: FYPO:0005082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at long terminal repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome at long terminal repeat","termid":"FYPO:0002575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at long terminal repeat","synonyms":[{"name":"normal protein localisation to chromatin at long terminal repeat","type":"exact"},{"name":"normal protein localization to chromatin at LTR","type":"exact"},{"name":"normal protein localization to chromatin at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at long terminal repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005082"}


id: FYPO:0003138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the ascospore wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"},{"relation_name":"output_of","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0002946","FYPO:0005447","FYPO:0001985","FYPO:0000121","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ascospore wall morphology","synonyms":[{"name":"abnormal spore wall morphology","type":"exact"},{"name":"abnormal spore wall organization","type":"related"}],"termid":"FYPO:0003138"}


id: PBO:0070740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 10","termid":"PBO:0070740"}


id: PATO:0000625
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being reversed in position, order, or condition.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","synonyms":[{"name":"backward","type":"related"},{"name":"reversed","type":"related"}],"termid":"PATO:0000625"}


id: PR:O13904
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug84 gene.","definition_xrefs":["UniProtKB:O13904","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 84 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.13","synonyms":[{"name":"Spom972h-mug84","type":"exact"}],"termid":"PR:O13904"}


id: PBO:0056913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane integral NOTCH2 associated receptor 2","termid":"PBO:0056913"}


id: PBO:0059919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 5","termid":"PBO:0059919"}


id: GO:0098726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a skeletal muscle satellite stem cell, resulting in two skeletal muscle satellite stem cells. This process is involved in amplification of the pool of these cells.","definition_xrefs":["PMID:23303905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"},{"relation_name":"is_a","term_name":"symmetric stem cell division","termid":"GO:0098724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric division of skeletal muscle satellite stem cell","termid":"GO:0098726"}


id: FYPO:0004548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"normal protein kinase activity during cellular response to HU","type":"exact"},{"name":"normal protein kinase activity in response to hydroxyurea","type":"related"}],"termid":"FYPO:0004548"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: PBO:0059149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 1","termid":"PBO:0059149"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: GO:0015453
data:
  {"annotated_genes":["SJAG_00976","SJAG_03337","SJAG_MIT13","SJAG_02646","SJAG_03490","SJAG_01490","SJAG_MIT03","SJAG_07007","SJAG_02504","SJAG_01355","SJAG_00601","SJAG_01077","SJAG_MIT04","SJAG_01190","SJAG_04152","SJAG_00755","SJAG_05629","SJAG_07006","SJAG_MIT20"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115166,88133,115167,115191,115190,84429,104465,112979,111613,85437,115146,110822,110401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[109039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[100659,115170,104142,100253,109586,113819,114282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Primary active transport of a solute across a membrane, driven by exothermic flow of electrons from a reduced substrate to an oxidized substrate. Primary active transport is catalysis of the transport of a solute across a membrane, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is driven by a primary energy source.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","TC:3.D.-.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oxidoreduction-driven active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.D"],"synonyms":[{"name":"oxidoreduction-driven transporter","type":"exact"}],"termid":"GO:0015453","terms_by_termid":{"GO:0004129":null,"GO:0008121":null,"GO:0008137":null}}


id: PBO:0054858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2272","termid":"PBO:0054858"}


id: GO:1904978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22511594","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosome organization","synonyms":[{"name":"regulation of endosome organisation","type":"exact"},{"name":"regulation of endosome organization and biogenesis","type":"related"}],"termid":"GO:1904978"}


id: PBO:0038683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 2","termid":"PBO:0038683"}


id: PBO:0088273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase/ ubiquitin-protein ligase E3 Irc20","termid":"PBO:0088273"}


id: PBO:0043953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 1","termid":"PBO:0043953"}


id: PBO:0073443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor proline and glutamine rich pseudogene 1","termid":"PBO:0073443"}


id: GO:0047844
data:
  {"annotated_genes":["SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85412],"is_not":false,"summary":null,"term":"GO:0047844"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxycytidine + H2O = deoxyuridine + NH3.","definition_xrefs":["MetaCyc:DEOXYCYTIDINE-DEAMINASE-RXN","EC:3.5.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"deoxycytidine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:13433","MetaCyc:CYTIDEAM-RXN"],"synonyms":[{"name":"deoxycytidine aminohydrolase activity","type":"related"}],"termid":"GO:0047844","terms_by_termid":{"GO:0047844":null}}


id: SO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. GGTTTTTGT), part of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"J_gene_recombination_feature","termid":"SO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_nonamer","synonyms":[{"name":"J nonamer","type":"exact"},{"name":"J-NONAMER","type":"exact"}],"termid":"SO:0000514"}


id: PBO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing J","termid":"PBO:0051793"}


id: GO:0010401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactan, a polymer of D-galactosyl units that can be found as a side chain of the pectin rhamnogalacturonan I.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I side chain metabolic process","termid":"GO:0010400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"pectic galactan metabolic process","synonyms":[{"name":"pectic galactan metabolism","type":"exact"}],"termid":"GO:0010401"}


id: PBO:0079764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFD1 antisense RNA 1","termid":"PBO:0079764"}


id: PBO:0078529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 22","termid":"PBO:0078529"}


id: PBO:0048068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 19","termid":"PBO:0048068"}


id: GO:0048531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule to an oligosaccharide, forming a beta-1,3-linkage.","definition_xrefs":["PMID:11551958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}


id: PBO:0091192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile","termid":"PBO:0091192"}


id: PBO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E2","termid":"PBO:0075521"}


id: PBO:0084019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylated integral membrane protein localized to plasma membrane; plays a role in fructose-1,6-bisphosphatase (FBPase) degradation; involved in FBPase transport from the cytosol to Vid (vacuole import and degradation) vesicles; VID22 has a paralog, ENV11, that arose from the whole genome duplication","termid":"PBO:0084019"}


id: GO:2000444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 21 signaling pathway","termid":"GO:2000443"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"negative regulation of TLR21 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000444"}


id: GO:0019358
data:
  {"annotated_genes":["SJAG_04467","SJAG_00957","SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85235,86856,105811],"is_not":false,"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The generation of nicotinate nucleotide without de novo synthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"},{"relation_name":"is_a","term_name":"pyridine nucleotide salvage","termid":"GO:0019365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinate nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5381","MetaCyc:PYRIDNUCSAL-PWY"],"synonyms":[{"name":"nicotinate nucleotide biosynthesis, salvage pathway","type":"exact"},{"name":"nicotinate nucleotide biosynthetic process, salvage pathway","type":"exact"}],"termid":"GO:0019358","terms_by_termid":{"GO:0019358":null}}


id: PBO:0055178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2602","termid":"PBO:0055178"}


id: PBO:0087468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; negatively regulates the GTPase cycle of Gtr1p, a Ran/TC4 homolog; subunit of EGO, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and endosome to plasma membrane sorting of Gap1p; activates transcription when chromatin bound; activated by the Lst4p-Lst7p GAP complex; homolog of human RagC","termid":"PBO:0087468"}


id: GO:0098804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a non-motile cilium.","definition_xrefs":["GOC:dos","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"part_of","term_name":"non-motile cilium","termid":"GO:0097730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"non-motile cilium membrane","synonyms":[{"name":"nonmotile primary cilium membrane","type":"related"}],"termid":"GO:0098804"}


id: FYPO:0003985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of an amino acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular amino acid level during vegetative growth","termid":"FYPO:0003984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular amino acid level","synonyms":[{"name":"decreased cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular amino acid level during vegetative growth","type":"exact"},{"name":"decreased level of amino acid in cell","type":"exact"},{"name":"reduced cellular amino acid level","type":"exact"},{"name":"reduced level of amino acid in cell","type":"exact"}],"termid":"FYPO:0003985"}


id: FYPO:0000816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a substance released into the growth medium by cells is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased concentration of substance in growth medium","synonyms":[{"name":"decreased accumulation of substance in growth medium","type":"related"},{"name":"decreased level of substance in growth medium","type":"exact"},{"name":"decreased release of substance into growth medium","type":"related"},{"name":"reduced concentration of substance in growth medium","type":"exact"}],"termid":"FYPO:0000816"}


id: PR:000050529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PMID:22150589","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me1(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf1/Me1(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050529"}


id: PBO:0054047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1388","termid":"PBO:0054047"}


id: PBO:0017700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein Spa2","termid":"PBO:0017700"}


id: PBO:0082896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin for the Sgv1p (Bur1p) protein kinase; subunit of the CDK-cyclin BUR kinase complex with Sgv1p (Bur2p); regulates Set2p-dependent H3K36 trimethylation; regulates transcriptional elongation through the phosphorylation of the carboxy-terminal domain (CTD) of Rpo21p; involved in the recruitment of Spt6p to the CTD at the onset of transcription; regulates telomere elongation","termid":"PBO:0082896"}


id: PBO:0005383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2-C, Ubc11","termid":"PBO:0005383"}


id: GO:0061383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of shaping a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecula morphogenesis","termid":"GO:0061383"}


id: PBO:0062974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 4 like","termid":"PBO:0062974"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: GO:2001167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B ubiquitination (obsolete GO:2001167)","termid":"GO:2001167"}


id: PBO:0053683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 870","termid":"PBO:0053683"}


id: PR:Q09760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cullin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00186","PANTHER:PTHR11932:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.03","secondary_identifiers":["UniProtKB:Q09760"],"synonyms":[{"name":"Cul-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CUL3","type":"exact"}],"termid":"PR:Q09760"}


id: GO:1901275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tartrate.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate metabolic process","synonyms":[{"name":"tartrate metabolism","type":"exact"}],"termid":"GO:1901275"}


id: GO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.","definition_xrefs":["GOC:mah","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caffeine","termid":"GO:0031000"}


id: PBO:0063760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1 pseudogene 1","termid":"PBO:0063760"}


id: GO:0032224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, cholinergic","synonyms":[{"name":"activation of synaptic transmission, cholinergic","type":"narrow"},{"name":"stimulation of synaptic transmission, cholinergic","type":"narrow"},{"name":"up regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"up-regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"upregulation of synaptic transmission, cholinergic","type":"exact"}],"termid":"GO:0032224"}


id: PR:Q9UTD6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yea6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTD6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C227.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.03c","synonyms":[{"name":"Spom972h-yea6","type":"exact"}],"termid":"PR:Q9UTD6"}


id: GO:0075132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont interferes with protein kinase-mediated signal transduction in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of host protein kinase-mediated signal transduction (obsolete GO:0075132)","synonyms":[{"name":"negative regulation by symbiont of host protein kinase-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host protein kinase-mediated signal transduction","type":"exact"}],"termid":"GO:0075132"}


id: SO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated as it is translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_regulated","synonyms":[{"name":"translationally regulated","type":"exact"}],"termid":"SO:0000131"}


id: PBO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1 and alpha 3, variable copy number locus","termid":"PBO:0044788"}


id: GO:1905800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27930654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"negatively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intraciliary retrograde transport","synonyms":[{"name":"down regulation of intraciliary retrograde transport","type":"exact"},{"name":"down regulation of intraflagellar retrograde transport","type":"exact"},{"name":"down-regulation of intraciliary retrograde transport","type":"exact"},{"name":"down-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"downregulation of intraciliary retrograde transport","type":"exact"},{"name":"downregulation of intraflagellar retrograde transport","type":"exact"},{"name":"inhibition of intraciliary retrograde transport","type":"narrow"},{"name":"inhibition of intraflagellar retrograde transport","type":"narrow"},{"name":"negative regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905800"}


id: PR:Q7LKZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein FAM50A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM50 family protein C1020.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.12c","secondary_identifiers":["UniProtKB:Q7LKZ5"],"synonyms":[{"name":"Spom972h-FAM50A","type":"exact"}],"termid":"PR:Q7LKZ5"}


id: FYPO:0000174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal cell wall","termid":"FYPO:0002946"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell wall biogenesis","synonyms":[{"name":"abnormal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0000174"}


id: GO:0070428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"regulation of NOD1 signaling pathway","type":"exact"},{"name":"regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070428"}


id: GO:1903546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a photoreceptor outer segment.","definition_xrefs":["PMID:21867699","GO_REF:0000087","PMID:11481257","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to non-motile cilium","termid":"GO:0097499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to photoreceptor outer segment","synonyms":[{"name":"protein localisation in photoreceptor outer segment","type":"exact"},{"name":"protein localisation to photoreceptor outer segment","type":"exact"},{"name":"protein localization in photoreceptor outer segment","type":"exact"}],"termid":"GO:1903546"}


id: PBO:0044687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartate oxidase","termid":"PBO:0044687"}


id: PBO:0073240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 4","termid":"PBO:0073240"}


id: PBO:0069800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1086, pseudogene","termid":"PBO:0069800"}


id: GO:2000248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or maintenance of neuroblast polarity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"is_a","term_name":"negative regulation of asymmetric cell division","termid":"GO:0045769"},{"relation_name":"negatively_regulates","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment or maintenance of neuroblast polarity","synonyms":[{"name":"negative regulation of establishment and/or maintenance of neuroblast cell polarity","type":"exact"}],"termid":"GO:2000248"}


id: PBO:0080473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 4","termid":"PBO:0080473"}


id: PBO:0053094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3B","termid":"PBO:0053094"}


id: PBO:0059143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose phosphate isomerase","termid":"PBO:0059143"}


id: PBO:0082836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm","termid":"PBO:0082836"}


id: GO:0036449
data:
  {"annotated_genes":["SJAG_02761","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95376,96536],"is_not":false,"summary":null,"term":"GO:0036449"}]},"cv_name":"cellular_component","definition":"The end of a microtubule that does not preferentially grow (polymerize).","definition_xrefs":["PMID:23169647","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"microtubule minus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule minus end","type":"exact"}],"termid":"GO:0036449","terms_by_termid":{"GO:0036449":null}}


id: PBO:0086302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in UDP-galactose transport to the Golgi lumen; has similarity to human UDP-galactose transporter UGTrel1, exhibits a genetic interaction with S. cerevisiae ERO1","termid":"PBO:0086302"}


id: FYPO:0007478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations retains heterochromatic structure for fewer generations than normal.","definition_xrefs":["PMID:31278118","PMID:29899117","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007477"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0007477"],"is_obsolete":false,"name":"decreased epigenetic heterochromatin inheritance","synonyms":[{"name":"decreased PEV","type":"related"},{"name":"decreased epigenetic heterochromatin propagation","type":"exact"},{"name":"epigenetic inheritance of heterochromatin","type":"exact"},{"name":"reduced epigenetic heterochromatin inheritance","type":"exact"}],"termid":"FYPO:0007478"}


id: PBO:0042587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDR2 divergent transcript","termid":"PBO:0042587"}


id: PBO:0029322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_centromeric_tDNA_during_mitotic_S_phase","termid":"PBO:0029322"}


id: GO:1904943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GOC:bc","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","PMID:23575307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac chamber formation","termid":"GO:1901211"},{"relation_name":"is_a","term_name":"negative regulation of cardiac ventricle development","termid":"GO:1904413"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle formation","termid":"GO:1904942"},{"relation_name":"negatively_regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac ventricle formation","synonyms":[{"name":"down regulation of cardiac ventricle formation","type":"exact"},{"name":"down-regulation of cardiac ventricle formation","type":"exact"},{"name":"downregulation of cardiac ventricle formation","type":"exact"},{"name":"inhibition of cardiac ventricle formation","type":"narrow"}],"termid":"GO:1904943"}


id: GO:0043198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic shaft","secondary_identifiers":["NIF_Subcellular:sao2034472720"],"synonyms":[{"name":"trunk","type":"related"}],"termid":"GO:0043198"}


id: PBO:0031900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level, annotation_extension=during(GO:0000090)","termid":"PBO:0031900"}


id: PBO:0069949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1242, pseudogene","termid":"PBO:0069949"}


id: PBO:0046069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L","termid":"PBO:0046069"}


id: PBO:0056630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 10","termid":"PBO:0056630"}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: PBO:0025441
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G6PD deficiency","termid":"PBO:0025441"}


id: PBO:0029942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_elongated_cell_during_cellular_response_to_hydroxyurea","termid":"PBO:0029942"}


id: GO:0140989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-deoxyloganate + O2 + reduced [NADPH-hemoprotein reductase] = H+ + H2O + loganate + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:24710322","RHEA:57576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"7-deoxyloganate 7-hydroxylase activity","secondary_identifiers":["EC:1.14.14.85"],"termid":"GO:0140989"}


id: PBO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 3","termid":"PBO:0061099"}


id: PBO:0048920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member Q","termid":"PBO:0048920"}


id: PBO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase activator","termid":"PBO:0044542"}


id: GO:0047678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + O2 = 4-guanidinobutanamide + CO2 + H2O.","definition_xrefs":["EC:1.13.12.1","RHEA:10548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arginine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00559","MetaCyc:ARGININE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-arginine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"arginine decarboxy-oxidase activity","type":"related"},{"name":"arginine monooxygenase activity","type":"related"},{"name":"arginine oxygenase (decarboxylating) activity","type":"related"}],"termid":"GO:0047678"}


id: GO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"},{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histamine metabolic process","synonyms":[{"name":"histamine metabolism","type":"exact"}],"termid":"GO:0001692"}


id: PBO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.1","termid":"PBO:0000676"}


id: PBO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 87","termid":"PBO:0042031"}


id: PBO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 14","termid":"PBO:0050312"}


id: PR:P87015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.03 gene.","definition_xrefs":["UniProtKB:P87015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.03","synonyms":[{"name":"L-asparagine amidohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC186.03","type":"exact"}],"termid":"PR:P87015"}


id: PBO:0004081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase (predicted)","termid":"PBO:0004081"}


id: PBO:0109456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, human ZNRF3 homolog","termid":"PBO:0109456"}


id: PBO:0063434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 8","termid":"PBO:0063434"}


id: GO:1903608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cytoplasmic stress granule.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:24755092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytoplasmic stress granule","synonyms":[{"name":"protein localisation in cytoplasmic stress granule","type":"exact"},{"name":"protein localisation to cytoplasmic stress granule","type":"exact"},{"name":"protein localization in cytoplasmic stress granule","type":"exact"},{"name":"protein localization to stress granule","type":"broad"}],"termid":"GO:1903608"}


id: PBO:0028196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-azetidine-2-carboxylic_acid","termid":"PBO:0028196"}


id: GO:1902543
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103409],"is_not":false,"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to mitotic spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:22809626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to spindle pole body","termid":"GO:1902364"},{"relation_name":"is_a","term_name":"regulation of protein localization to mitotic spindle pole body","termid":"GO:1902542"},{"relation_name":"negatively_regulates","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"down regulation of protein localization to mitotic spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation in mitotic spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"down-regulation of protein localization to mitotic spindle pole body","type":"exact"},{"name":"downregulation of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"downregulation of protein localization to mitotic spindle pole body","type":"exact"},{"name":"inhibition of protein localisation to mitotic spindle pole body","type":"narrow"},{"name":"inhibition of protein localization to mitotic spindle pole body","type":"narrow"},{"name":"negative regulation of protein localisation to mitotic spindle pole body","type":"exact"}],"termid":"GO:1902543","terms_by_termid":{"GO:1902543":null}}


id: PBO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb6","termid":"PBO:0002857"}


id: PBO:0074007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 8","termid":"PBO:0074007"}


id: PBO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 1","termid":"PBO:0046405"}


id: GO:0004737
data:
  {"annotated_genes":["SJAG_02734","SJAG_04842","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84736,93450,93451],"is_not":false,"summary":null,"term":"GO:0004737"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxo acid = an aldehyde + CO2.","definition_xrefs":["EC:4.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate decarboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:11628","MetaCyc:PYRUVATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"2-oxo-acid carboxy-lyase (aldehyde-forming)","type":"related"},{"name":"2-oxo-acid carboxy-lyase activity","type":"related"},{"name":"alpha-carboxylase activity","type":"related"},{"name":"alpha-ketoacid carboxylase activity","type":"related"},{"name":"pyruvic decarboxylase activity","type":"related"}],"termid":"GO:0004737","terms_by_termid":{"GO:0004737":null}}


id: GO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic metabolic process","synonyms":[{"name":"peptide antibiotic metabolism","type":"exact"}],"termid":"GO:0030650"}


id: PBO:0091252
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD54","termid":"PBO:0091252"}


id: PBO:0052610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 1","termid":"PBO:0052610"}


id: PBO:0013458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase Gcd10 (predicted)","termid":"PBO:0013458"}


id: PBO:0053193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 1 pseudogene 1","termid":"PBO:0053193"}


id: GO:0097649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complete microtubule with 13 protofilaments that fuses with an incomplete microtubule called B tubule (containing 10 protofilaments only) to form an axonemal outer doublet. Inner and outer dynein arms, as well as the radial spoke, are attached to the A tubule.","definition_xrefs":["GOC:cilia","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal outer doublet","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"A axonemal microtubule","synonyms":[{"name":"A tubule","type":"broad"}],"termid":"GO:0097649"}


id: PBO:0072380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 6","termid":"PBO:0072380"}


id: GO:1900237
data:
  {"annotated_genes":["SJAG_05153","SJAG_03346","SJAG_01113","SJAG_02472","SJAG_03309","SJAG_04206","SJAG_00256","SJAG_02066","SJAG_03067","SJAG_04009","SJAG_06638","SJAG_04813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84089,95664,96657,97551,99540,100609,103226,104758,104988,112440,115198,115199],"is_not":false,"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of induction of conjugation with cellular fusion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_01113":null,"SJAG_02066":null,"SJAG_02472":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_04009":null,"SJAG_04206":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"up regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of induction of conjugation with cellular fusion","type":"exact"}],"termid":"GO:1900237","terms_by_termid":{"GO:1900237":null}}


id: PBO:0091247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh1","termid":"PBO:0091247"}


id: GO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of T/G mismatches arising from deamination of 5-methylcytosine in DNA by nicking double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the mismatched thymidine residue. The incision is mismatch-dependent and strand-specific, in favor of the G-containing strand. The incision serves as a starting point for subsequent excision repair by DNA polymerase I, which excises thymidine and reinserts cytidine.","definition_xrefs":["PMID:17651368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"T/G mismatch-specific endonuclease activity","synonyms":[{"name":"DNA mismatch endonuclease","type":"broad"},{"name":"V.EcoKDcm","type":"related"},{"name":"Vsr mismatch endonuclease","type":"related"},{"name":"very short patch repair protein","type":"related"}],"termid":"GO:0043765"}


id: PBO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-W","termid":"PBO:0002626"}


id: PBO:0077931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 4","termid":"PBO:0077931"}


id: PBO:0060298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 7","termid":"PBO:0060298"}


id: PBO:0055662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, muscle differentiation 1","termid":"PBO:0055662"}


id: PBO:0076120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 4","termid":"PBO:0076120"}


id: PBO:0031226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_caffeine","termid":"PBO:0031226"}


id: GO:0042834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently, in a non-covalent manner, with peptidoglycan, any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["PMID:14698226","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peptidoglycan binding","termid":"GO:0042834"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: PBO:0039428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 8","termid":"PBO:0039428"}


id: PBO:0049367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2","termid":"PBO:0049367"}


id: PBO:0059514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded minor H-strand promoter","termid":"PBO:0059514"}


id: PBO:0012278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1 (predicted)","termid":"PBO:0012278"}


id: PBO:0064539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin C","termid":"PBO:0064539"}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: PBO:0065757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 2","termid":"PBO:0065757"}


id: GO:0141126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acyl-CoA + H2O = a short fatty acid + CoA + H+. A short-chain fatty acid has an aliphatic tail of less than 6 carbons.","definition_xrefs":["RHEA:68180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA hydrolase activity","secondary_identifiers":["EC:3.1.2.18","MetaCyc:3.1.2.18-RXN"],"termid":"GO:0141126"}


id: PBO:0061351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 9","termid":"PBO:0061351"}


id: PBO:0028197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hypothemycin","termid":"PBO:0028197"}


id: FYPO:0007016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of rRNA genes in ribosomal DNA repeat regions is increased.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at rDNA","termid":"FYPO:0004032"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of rRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of rRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of ribosomal RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at rRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007016"}


id: GO:0060741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the prostate gland stroma is generated and organized. The prostate gland stroma is made up of the mesenchymal or fibroblast cells of the prostate gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"prostate gland morphogenesis","termid":"GO:0060512"},{"relation_name":"part_of","term_name":"connective tissue development","termid":"GO:0061448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland stromal morphogenesis","termid":"GO:0060741"}


id: FYPO:0001042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division","synonyms":[{"name":"inviable following spore germination, single or double cell division","type":"exact"},{"name":"inviable germinated spore, single or double cell division","type":"exact"},{"name":"lethal after spore germination, single or double cell division","type":"exact"}],"termid":"FYPO:0001042"}


id: GO:0102910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 2 coniferol + O2 = (+)-pinoresinol + 2 H2O.","definition_xrefs":["GOC:pz","EC:1.10.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dirigent protein activity","secondary_identifiers":["MetaCyc:RXN-8677"],"termid":"GO:0102910"}


id: PBO:0065542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotriesterase related","termid":"PBO:0065542"}


id: GO:0035961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ergosterol biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:11533229"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035961)","synonyms":[{"name":"positive regulation of ergosterol anabolism by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol anabolism by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol anabolism by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol anabolism by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthetic process by activation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by positive regulation of transcription from Pol II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by stimulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by up regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by up-regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by upregulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol formation by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol formation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol formation by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol formation by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol formation by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol synthesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035961"}


id: FYPO:0001658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of valine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal valine import","synonyms":[{"name":"abnormal L-valine import","type":"exact"},{"name":"abnormal L-valine import across plasma membrane","type":"exact"},{"name":"abnormal valine import during mitotic cell cycle","type":"related"},{"name":"abnormal valine import during vegetative growth","type":"exact"},{"name":"abnormal valine import into cell","type":"exact"},{"name":"abnormal valine uptake","type":"exact"}],"termid":"FYPO:0001658"}


id: PBO:0082332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK","termid":"PBO:0082332"}


id: FYPO:0002260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-glutamate import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal glutamate import","synonyms":[{"name":"normal L-glutamate import across plasma membrane","type":"exact"},{"name":"normal L-glutamic acid import","type":"exact"},{"name":"normal glutamate import during mitotic cell cycle","type":"related"},{"name":"normal glutamate import during vegetative growth","type":"exact"},{"name":"normal glutamate import into cell","type":"exact"},{"name":"normal glutamate uptake","type":"exact"},{"name":"normal glutamic acid import","type":"exact"}],"termid":"FYPO:0002260"}


id: PBO:0061086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 4","termid":"PBO:0061086"}


id: PBO:0081902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 859, pseudogene","termid":"PBO:0081902"}


id: PBO:0088312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0088312"}


id: PBO:0017756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase beta subunit Frs1 (predicted)","termid":"PBO:0017756"}


id: PBO:0088783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Atf31","termid":"PBO:0088783"}


id: PBO:0030384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subcellular_component","termid":"PBO:0030384"}


id: PBO:0039435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and armadillo repeat containing","termid":"PBO:0039435"}


id: PBO:0046577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 19, envelope","termid":"PBO:0046577"}


id: GO:1901267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephalosporin C.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00172","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"cephalosporin C catabolic process","synonyms":[{"name":"cephalosporin C breakdown","type":"exact"},{"name":"cephalosporin C catabolism","type":"exact"},{"name":"cephalosporin C degradation","type":"exact"}],"termid":"GO:1901267"}


id: GO:0008044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Behavior in a fully developed and mature organism, as seen in insects.","definition_xrefs":["GOC:bf","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete adult behavior (sensu Insecta) (obsolete GO:0008044)","synonyms":[{"name":"adult behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0008044"}


id: FYPO:0002814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is abnormal. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to cell surface","synonyms":[{"name":"abnormal protein localisation to cell surface","type":"exact"},{"name":"abnormal protein localization to cell surface during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell surface during vegetative growth","type":"exact"}],"termid":"FYPO:0002814"}


id: PBO:0109172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKMYT1 associated lncRNA","termid":"PBO:0109172"}


id: PBO:0065714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PVR related immunoglobulin domain containing","termid":"PBO:0065714"}


id: SO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small untranslated RNA involved in expression of the dipeptide and oligopeptide transport systems in Escherichia coli.","direct_ancestors":[{"relation_name":"is_a","term_name":"DsrA_RNA","termid":"SO:0000378"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GcvB_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/GcvB_RNA"],"synonyms":[{"name":"GcvB RNA","type":"exact"}],"termid":"SO:0000379"}


id: PBO:0061607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1","termid":"PBO:0061607"}


id: PBO:0038376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-root_parasite_of","termid":"PBO:0038376"}


id: GO:0031363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}


id: PBO:0040959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 30","termid":"PBO:0040959"}


id: PBO:0030194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology_during_nitrogen_starvation","termid":"PBO:0030194"}


id: GO:0030887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stimulates, induces or increases the rate of myeloid dendritic cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell activation","termid":"GO:0030885"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell activation","synonyms":[{"name":"activation of myeloid dendritic cell activation","type":"narrow"},{"name":"stimulation of myeloid dendritic cell activation","type":"narrow"},{"name":"up regulation of myeloid dendritic cell activation","type":"exact"},{"name":"up-regulation of myeloid dendritic cell activation","type":"exact"},{"name":"upregulation of myeloid dendritic cell activation","type":"exact"}],"termid":"GO:0030887"}


id: PBO:0078011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 1 (non-functional)","termid":"PBO:0078011"}


id: GO:0017169
data:
  {"annotated_genes":["SJAG_00168","SJAG_00999","SJAG_04319","SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008444"},{"annotations":[88330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003881"},{"annotations":[110844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003882"},{"annotations":[89234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004142"},{"annotations":[89235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004307"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP + alcohol = CMP + phosphatidyl alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00999":null,"SJAG_01233":null,"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"CDP-alcohol phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017169","terms_by_termid":{"GO:0003881":null,"GO:0003882":null,"GO:0004142":null,"GO:0004307":null,"GO:0008444":null}}


id: PBO:0029120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate","termid":"PBO:0029120"}


id: PBO:0047881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(5)(q15)","termid":"PBO:0047881"}


id: PBO:0056740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METAP2 pseudogene 1","termid":"PBO:0056740"}


id: PBO:0073145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 homolog B, COPII coat complex component","termid":"PBO:0073145"}


id: PBO:0079054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 10-1","termid":"PBO:0079054"}


id: PBO:0065212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin 2","termid":"PBO:0065212"}


id: PBO:0055171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2595","termid":"PBO:0055171"}


id: PBO:0072340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 26","termid":"PBO:0072340"}


id: PBO:0052696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 4","termid":"PBO:0052696"}


id: PBO:0084905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); involved in regulation of pyruvate dehydrogenase activity by dephosphorylating the serine 133 of the Pda1p subunit; localizes to the intermembrane space and is imported via the presequence pathway and processed by the inner membrane protease (Imp1p-Imp2p); acts in concert with kinases Pkp1p and Pkp2p and phosphatase Ptc6p","termid":"PBO:0084905"}


id: FYPO:0006793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the specificity between a meiotic driver gene and a drive suppressor gene differs from that observed when both genes are wild type. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PMID:30475921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered meiotic drive suppression specificity","synonyms":[{"name":"abnormal meiotic drive suppression specificity","type":"exact"},{"name":"abnormal specificity of suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006793"}


id: FYPO:0001915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000121","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished prospore membrane formation","synonyms":[{"name":"abolished ascospore-type prospore membrane assembly","type":"exact"},{"name":"abolished forespore membrane formation","type":"exact"},{"name":"prospore membrane formation abolished","type":"exact"}],"termid":"FYPO:0001915"}


id: GO:0034496
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90104],"is_not":false,"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the membranes of multivesicular bodies.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"part_of","term_name":"multivesicular body organization","termid":"GO:0036257"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"multivesicular body membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MVB membrane disassembly","type":"exact"}],"termid":"GO:0034496","terms_by_termid":{"GO:0034496":null}}


id: GO:0102950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-valine + ATP = H+ + indole-3-acetyl-valine + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"indole-3-acetyl-valine synthetase activity","secondary_identifiers":["MetaCyc:RXN-9083"],"termid":"GO:0102950"}


id: MOD:00096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamic acid 1-amide.","definition_xrefs":["PubMed:1093875","PubMed:14550575","RESID:AA0087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 1-amide","synonyms":[{"name":"(2S)-2-amino-1-pentanediamic acid","type":"exact"},{"name":"1-amidated L-glutamic acid","type":"exact"},{"name":"4,5-diamino-5-oxopentanoic acid","type":"exact"},{"name":"GluN","type":"exact"},{"name":"L-glutamic acid 1-amide","type":"exact"},{"name":"MOD_RES Glutamic acid 1-amide","type":"exact"},{"name":"isoglutamine","type":"exact"}],"termid":"MOD:00096"}


id: GO:0043748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoate + H2O = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate.","definition_xrefs":["PMID:8335646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-succinylbenzoate synthase activity","secondary_identifiers":["EC:4.2.1.113"],"termid":"GO:0043748"}


id: GO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron apoptotic process","synonyms":[{"name":"regulation of apoptosis of neuronal cells","type":"exact"},{"name":"regulation of apoptosis of neurons","type":"exact"},{"name":"regulation of neuron apoptosis","type":"narrow"},{"name":"regulation of neuron programmed cell death","type":"exact"},{"name":"regulation of neuronal cell programmed cell death","type":"exact"},{"name":"regulation of programmed cell death of neuronal cells","type":"exact"},{"name":"regulation of programmed cell death, neurons","type":"exact"}],"termid":"GO:0043523"}


id: PBO:0049845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 6","termid":"PBO:0049845"}


id: PBO:0064481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta pseudogene 1","termid":"PBO:0064481"}


id: PBO:0044936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyguanosine kinase","termid":"PBO:0044936"}


id: PBO:0065752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 5","termid":"PBO:0065752"}


id: PBO:0024854
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cowden syndrome","termid":"PBO:0024854"}


id: PR:Q9HDU8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.07c gene.","definition_xrefs":["UniProtKB:Q9HDU8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein PB2B2.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.07c","synonyms":[{"name":"Spom972h-SPBPB2B2.07c","type":"exact"}],"termid":"PR:Q9HDU8"}


id: PBO:0041833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 9","termid":"PBO:0041833"}


id: GO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes ERAD-luminal misfolded substrates and brings them to the ubiquitination/extraction machinery. In yeast, this complex consists of Yos9p, Kar2p and Hrd3p proteins.","definition_xrefs":["PMID:16873065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"luminal surveillance complex","termid":"GO:0034099"}


id: PBO:0068469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 46, pseudogene","termid":"PBO:0068469"}


id: PBO:0035875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035875"}


id: SO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_translocation","termid":"SO:0001884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_translocation","synonyms":[{"name":"TFBS binding site translocation","type":"exact"},{"name":"transcription factor binding site translocation","type":"exact"}],"termid":"SO:0001885"}


id: FYPO:0004317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the post-anaphase array of microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal post-anaphase array morphology","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase array morphology during vegetative growth","type":"exact"},{"name":"abnormal post-anaphase microtubule array morphology","type":"exact"}],"termid":"FYPO:0004317"}


id: PBO:0031223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_drug_(obsolete_FYPO:0000211)","termid":"PBO:0031223"}


id: PBO:0080546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 5","termid":"PBO:0080546"}


id: FYPO:0004013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4,6-pyruvylated D-galactose (4,6-O-[(1R)-1-carboxyethylidene]-D-galactose) measured at the cell surface is lower than normal. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:25195688","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell surface pyruvylated galactose level","synonyms":[{"name":"decreased cell surface 4,6-4,6-O-[(1R)-1-carboxyethylidene]-D-galactose level","type":"exact"},{"name":"decreased cell surface 4,6-pyruvylated D-galactose level","type":"exact"},{"name":"decreased cell surface PvGal level","type":"exact"},{"name":"decreased cell surface pyruvylated galactose level during mitotic cell cycle","type":"related"},{"name":"decreased cell surface pyruvylated galactose level during vegetative growth","type":"exact"},{"name":"decreased level of pyruvylated galactose at cell surface","type":"exact"},{"name":"reduced cell surface pyruvylated galactose level","type":"exact"}],"termid":"FYPO:0004013"}


id: PBO:0087914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in regulating arginine-responsive genes; acts with Arg81p and Arg82p","termid":"PBO:0087914"}


id: GO:0038142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated epidermal growth factor receptor (EGFR/ERBB1). ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as EGFR.","definition_xrefs":["Reactome:R-HSA-1227939","GOC:signaling","Reactome:R-HSA-1963573","Reactome:R-HSA-1963589","PMID:16460914","PMID:1973074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EGFR:ERBB2 complex","synonyms":[{"name":"EGF:EGFR:ERBB2 complex","type":"narrow"},{"name":"EGFR:ERBB2 heterodimer","type":"related"}],"termid":"GO:0038142"}


id: PBO:0091097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF ATP-dependent chromatin remodeler Snf22","termid":"PBO:0091097"}


id: GO:0002734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dendritic cell cytokine production","termid":"GO:0002731"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell cytokine production","synonyms":[{"name":"down regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"downregulation of myeloid dendritic cell cytokine production","type":"exact"},{"name":"inhibition of myeloid dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002734"}


id: GO:2000710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000710"}


id: PBO:0028936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_polypeptone","termid":"PBO:0028936"}


id: GO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area in which the heart will develop.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart field specification","termid":"GO:0003128"}


id: PR:Q9UTS8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: fex1/fex2.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0695 membrane protein C977.11/PB8B6.06c (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-fex2","type":"exact"}],"termid":"PR:Q9UTS8"}


id: PBO:0075356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 4","termid":"PBO:0075356"}


id: GO:0017087
data:
  {"annotated_genes":["SJAG_04641","SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101752,109372],"is_not":false,"summary":null,"term":"GO:0017087"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of a regulatory subunit (alpha-MPP) and a catalytic subunit (beta-MPP) that catalyzes the release of N-terminal targeting peptides from precursor proteins imported into the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02397":null,"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitochondrial processing peptidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017087","terms_by_termid":{"GO:0017087":null}}


id: PBO:0065127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, DNA-activated, catalytic subunit","termid":"PBO:0065127"}


id: GO:1904330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast contraction.","definition_xrefs":["GO_REF:0000058","PMID:19239477","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"is_a","term_name":"regulation of myofibroblast contraction","termid":"GO:1904328"},{"relation_name":"positively_regulates","term_name":"myofibroblast contraction","termid":"GO:1990764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast contraction","synonyms":[{"name":"activation of MF contraction","type":"narrow"},{"name":"activation of MFB contraction","type":"narrow"},{"name":"activation of myofibroblast contraction","type":"narrow"},{"name":"positive regulation of MF contraction","type":"exact"},{"name":"positive regulation of MFB contraction","type":"exact"},{"name":"up regulation of MF contraction","type":"exact"},{"name":"up regulation of MFB contraction","type":"exact"},{"name":"up regulation of myofibroblast contraction","type":"exact"},{"name":"up-regulation of MF contraction","type":"exact"},{"name":"up-regulation of MFB contraction","type":"exact"},{"name":"up-regulation of myofibroblast contraction","type":"exact"},{"name":"upregulation of MF contraction","type":"exact"},{"name":"upregulation of MFB contraction","type":"exact"},{"name":"upregulation of myofibroblast contraction","type":"exact"}],"termid":"GO:1904330"}


id: GO:0102367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2alpha-hydroxytaxusin + NADPH + O2 + H+ = 2alpha, 7beta-dihydroxytaxusin + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-alpha-hydroxytaxusin 7-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13488"],"termid":"GO:0102367"}


id: FYPO:0007039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased, and the protein is instead visible in one or a few foci or dots in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:30181366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitochondrion","termid":"FYPO:0007038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"decreased protein localisation to mitochondrion, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"decreased protein localization to mitochondrion, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"}],"termid":"FYPO:0007039"}


id: GO:0034834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-mercaptobenzothiazole + O2 + 2 H+ + 2 e- = 2-mercaptobenzothiazole-cis-6,7-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-mercaptobenzothiazole dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034834"}


id: PR:O94663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar-sorting protein SNF8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12806:SF0","OMA:SCHPO02784","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar-sorting protein dot2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.05c","secondary_identifiers":["UniProtKB:O94663"],"synonyms":[{"name":"ELL-associated protein of 30 kDa homolog dot2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNF8","type":"exact"},{"name":"defective organization of telomere protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94663"}


id: GO:0034805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene-trans-11,12-dihydrodiol = 11,12-dihydroxybenzo(a)pyrene + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzo(a)pyrene-trans-11,12-dihydrodiol dehydrogenase activity","termid":"GO:0034805"}


id: PBO:0077916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 7","termid":"PBO:0077916"}


id: PBO:0076611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 29, pseudogene","termid":"PBO:0076611"}


id: PBO:0108939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 18","termid":"PBO:0108939"}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: PBO:0051501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Indian hedgehog signaling molecule","termid":"PBO:0051501"}


id: PBO:0063361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 1","termid":"PBO:0063361"}


id: PBO:0005557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf13","termid":"PBO:0005557"}


id: PBO:0085964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p","termid":"PBO:0085964"}


id: PBO:0052758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 50","termid":"PBO:0052758"}


id: FYPO:0002463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved septated vegetative cell","termid":"FYPO:0002282"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002481"],"synonyms":[{"name":"inviable branched curved cell","type":"exact"},{"name":"inviable branched, curved cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved septated cell","type":"exact"},{"name":"inviable branched, curved vegetative cell","type":"exact"},{"name":"inviable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, curved septated cell","type":"exact"},{"name":"inviable branched, long, curved, septated cell","type":"exact"},{"name":"inviable curved branched cell","type":"exact"},{"name":"inviable curved branched elongated cell","type":"exact"},{"name":"inviable elongated branched curved cell","type":"exact"},{"name":"lethal; branched, curved, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002463"}


id: PBO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 4","termid":"PBO:0050921"}


id: FYPO:0005701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the interphase microtubule organizing center does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to iMTOC","synonyms":[{"name":"abolished protein localisation to iMTOC","type":"exact"},{"name":"abolished protein localization to iMTOC during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to iMTOC during vegetative growth","type":"exact"},{"name":"abolished protein localization to interphase microtubule organizing center","type":"exact"},{"name":"protein absent from iMTOC","type":"related"},{"name":"protein localization to iMTOC abolished","type":"exact"}],"termid":"FYPO:0005701"}


id: MOD:01706
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}


id: GO:0102529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + apigenin-7-olate = S-adenosyl-L-homocysteine + genkwanin.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"apigenin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14661"],"termid":"GO:0102529"}


id: PBO:0057432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-2","termid":"PBO:0057432"}


id: GO:0070137
data:
  {"annotated_genes":["SJAG_02214","SJAG_16454"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86477,102300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003824","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"ubiquitin-like protein-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small conjugating protein-specific endopeptidase activity","type":"exact"}],"termid":"GO:0070137","terms_by_termid":{"GO:0070139":null}}


id: PATO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000801 motor function value (obsolete PATO:0000801)","termid":"PATO:0000801"}


id: PATO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having a three dimensional cavity with a narrow or no opening, and often containing an anatomical substance.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccular","synonyms":[{"name":"sacular","type":"exact"}],"termid":"PATO:0001987"}


id: PBO:0049642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 45","termid":"PBO:0049642"}


id: GO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"asperthecin biosynthetic process","synonyms":[{"name":"asperthecin biosynthesis","type":"exact"},{"name":"asperthecin formation","type":"exact"},{"name":"asperthecin synthesis","type":"exact"}],"termid":"GO:0036184"}


id: GO:1990928
data:
  {"annotated_genes":["SJAG_04873","SJAG_00209","SJAG_02026","SJAG_02424","SJAG_00169","SJAG_02973","SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84253,90854,91401,105860,107138,87490,85630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids.","definition_xrefs":["PMID:7765311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_01184":null,"SJAG_02026":null,"SJAG_02424":null,"SJAG_02973":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amino acid starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990928","terms_by_termid":{"GO:0034198":null}}


id: PBO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliated left-right organizer metallopeptidase","termid":"PBO:0043179"}


id: GO:1905781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GOC:kmv","GO_REF:0000058","PMID:17401362","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid translocation","termid":"GO:0061093"},{"relation_name":"is_a","term_name":"negative regulation of execution phase of apoptosis","termid":"GO:1900118"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"down regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"down-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"down-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"downregulation of externalization of phosphatidylserine","type":"exact"},{"name":"downregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"inhibition of externalization of phosphatidylserine","type":"narrow"},{"name":"inhibition of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"negative regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905781"}


id: PBO:0079903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase binding protein pseudogene 1","termid":"PBO:0079903"}


id: PBO:0078726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 2-1","termid":"PBO:0078726"}


id: GO:1901547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle lumen acidification.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle lumen acidification","termid":"GO:1901546"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle lumen acidification","termid":"GO:0097401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle lumen acidification","synonyms":[{"name":"down regulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"down regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"down-regulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"down-regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"downregulation of synaptic vesicle lumen acidification","type":"exact"},{"name":"downregulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"inhibition of synaptic vesicle lumen acidification","type":"narrow"},{"name":"inhibition of synaptic vesicle lumen pH reduction","type":"narrow"},{"name":"negative regulation of proton loading","type":"exact"},{"name":"negative regulation of synaptic vesicle lumen pH reduction","type":"exact"}],"termid":"GO:1901547"}


id: FYPO:0002442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cell division site","synonyms":[{"name":"normal protein localisation to cell division site","type":"exact"},{"name":"normal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0002442"}


id: FYPO:0002315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular FPP level","synonyms":[{"name":"normal cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"normal cellular FPP accumulation","type":"related"},{"name":"normal cellular FPP level during mitotic cell cycle","type":"related"},{"name":"normal cellular FPP level during vegetative growth","type":"exact"},{"name":"normal cellular farnesyl diphosphate level","type":"broad"},{"name":"normal cellular farnesyl pyrophosphate level","type":"broad"}],"termid":"FYPO:0002315"}


id: PBO:0079114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 15 pseudogene 2","termid":"PBO:0079114"}


id: GO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoxylem development","termid":"GO:0090059"}


id: PR:Q9UUH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bmt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA adenine-N(1) methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.10","synonyms":[{"name":"Spom972h-bmt2","type":"exact"}],"termid":"PR:Q9UUH2"}


id: GO:0102427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allocryptopine + NADPH + O2 + H+ = 6-hydroxy-allocryptopine + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"allocryptopine 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13828"],"termid":"GO:0102427"}


id: PBO:0086754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proper regulation of expression during heat stress is sphingolipid-dependent; mCherry fusion protein localizes to the vacuole; YOR186W has a paralog, YLR297W, that arose from the whole genome duplication","termid":"PBO:0086754"}


id: FYPO:0001125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal vegetative cell shape","synonyms":[{"name":"normal cell shape during vegetative growth","type":"exact"},{"name":"normal vegetative cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001125"}


id: FYPO:0007273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cortical endoplasmic reticulum (ER) remodeling occurs to a greater extent than normal. Cortical ER remodeling is the dynamic spatial rearrangement of ER tubules near the cell cortex.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cortical endoplasmic reticulum remodeling","synonyms":[{"name":"increased cortical ER remodeling","type":"exact"},{"name":"increased cortical endoplasmic reticulum remodeling during mitotic cell cycle","type":"related"},{"name":"increased cortical endoplasmic reticulum remodeling during vegetative growth","type":"exact"}],"termid":"FYPO:0007273"}


id: GO:0019646
data:
  {"annotated_genes":["SJAG_00976","SJAG_01671","SJAG_01355","SJAG_07006","SJAG_02504","SJAG_05629","SJAG_03337","SJAG_03920","SJAG_MIT03","SJAG_01490","SJAG_00080","SJAG_00260","SJAG_02646","SJAG_01190","SJAG_01077","SJAG_MIT20","SJAG_MIT04","SJAG_02744","SJAG_00601","SJAG_02398","SJAG_MIT13","SJAG_07007","SJAG_00755","SJAG_03490","SJAG_01763","SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115145,115165,110400,112273,88132,110821,112978,104464,115188,85436,84428,111612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[109037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[112917,109380,85032,85397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[109585,114281,115169,100252,104140,113816,112274,86182,100657,111260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic electron transport chain","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006136","GO:0006138","GO:0006137"],"synonyms":[{"name":"NADH-O2 electron transport","type":"narrow"},{"name":"succinate-O2 electron transport","type":"narrow"},{"name":"ubiquinone-8-O2 electron transport","type":"narrow"}],"termid":"GO:0019646","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null}}


id: GO:1900093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"positively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of raffinose biosynthetic process","synonyms":[{"name":"activation of raffinose anabolism","type":"exact"},{"name":"activation of raffinose biosynthesis","type":"exact"},{"name":"activation of raffinose biosynthetic process","type":"narrow"},{"name":"activation of raffinose formation","type":"exact"},{"name":"activation of raffinose synthesis","type":"exact"},{"name":"positive regulation of raffinose anabolism","type":"exact"},{"name":"positive regulation of raffinose biosynthesis","type":"exact"},{"name":"positive regulation of raffinose formation","type":"exact"},{"name":"positive regulation of raffinose synthesis","type":"exact"},{"name":"up regulation of raffinose anabolism","type":"exact"},{"name":"up regulation of raffinose biosynthesis","type":"exact"},{"name":"up regulation of raffinose biosynthetic process","type":"exact"},{"name":"up regulation of raffinose formation","type":"exact"},{"name":"up regulation of raffinose synthesis","type":"exact"},{"name":"up-regulation of raffinose anabolism","type":"exact"},{"name":"up-regulation of raffinose biosynthesis","type":"exact"},{"name":"up-regulation of raffinose biosynthetic process","type":"exact"},{"name":"up-regulation of raffinose formation","type":"exact"},{"name":"up-regulation of raffinose synthesis","type":"exact"},{"name":"upregulation of raffinose anabolism","type":"exact"},{"name":"upregulation of raffinose biosynthesis","type":"exact"},{"name":"upregulation of raffinose biosynthetic process","type":"exact"},{"name":"upregulation of raffinose formation","type":"exact"},{"name":"upregulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900093"}


id: GO:0072722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amitrole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amitrole","synonyms":[{"name":"response to 3-amino-1,2,4-triazole","type":"exact"}],"termid":"GO:0072722"}


id: PBO:0086885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor, contains Forkhead Associated domain; binds chromatin; involved in expression homeostasis, buffering of mRNA synthesis rate against gene dosage changes during S phase; target of SBF transcription factor; expression is periodic and peaks in G1; involved in DNA replication checkpoint response; interacts with Rpd3 and Set3 histone deacetylase complexes; APCC(Cdh1) substrate; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0086885"}


id: GO:1903980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","PMID:19100238","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macrophage activation","termid":"GO:0043032"},{"relation_name":"is_a","term_name":"positive regulation of neuroinflammatory response","termid":"GO:0150078"},{"relation_name":"is_a","term_name":"regulation of microglial cell activation","termid":"GO:1903978"},{"relation_name":"positively_regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell activation","synonyms":[{"name":"activation of microglial cell activation","type":"narrow"},{"name":"up regulation of microglial cell activation","type":"exact"},{"name":"up-regulation of microglial cell activation","type":"exact"},{"name":"upregulation of microglial cell activation","type":"exact"}],"termid":"GO:1903980"}


id: PBO:0058358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4731","termid":"PBO:0058358"}


id: FYPO:0004668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature homologous chromosome segregation","synonyms":[{"name":"advanced homologous chromosome segregation","type":"exact"},{"name":"premature chromosome segregation during meiosis I","type":"exact"}],"termid":"FYPO:0004668"}


id: PBO:0052362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 11","termid":"PBO:0052362"}


id: PBO:0075308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5","termid":"PBO:0075308"}


id: PBO:0058089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4306","termid":"PBO:0058089"}


id: GO:0019336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound catabolic process","secondary_identifiers":["MetaCyc:PHENOLDEG-PWY"],"synonyms":[{"name":"phenol-containing compound breakdown","type":"exact"},{"name":"phenol-containing compound catabolism","type":"exact"},{"name":"phenol-containing compound degradation","type":"exact"}],"termid":"GO:0019336"}


id: SO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 23rd residue (a lysine), from the start of the H3 protein is di-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K23_dimethylation_site","synonyms":[{"name":"H3K23 dimethylation site","type":"exact"},{"name":"H3K23me2","type":"exact"}],"termid":"SO:0001951"}


