# terms

id: GO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-5 production","secondary_identifiers":["GO:0072603","GO:0042225"],"synonyms":[{"name":"IL-5 production","type":"exact"},{"name":"interleukin-5 biosynthetic process","type":"narrow"},{"name":"interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032634"}


id: GO:0021750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vestibular nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:jid","GOC:curators","GOC:cls","PMID:16221589","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular nucleus development","termid":"GO:0021750"}


id: PBO:0055547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2983","termid":"PBO:0055547"}


id: GO:0060843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized endothelial cell acquires specialized features of a venous endothelial cell, a thin flattened cell that lines the inside surfaces of veins.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous endothelial cell differentiation","termid":"GO:0060843"}


id: FYPO:0001859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased minichromosome loss","synonyms":[{"name":"minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001859"}


id: PBO:0088096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unique component of the U4/U6.U5 tri-snRNP particle; tri-snRNP is required for conformational changes which result in the catalytic activation of the spliceosome; dispensable for spliceosome assembly","termid":"PBO:0088096"}


id: PATO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001232 heat insentive (obsolete PATO:0001232)","termid":"PATO:0001232"}


id: PBO:0081435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286A","termid":"PBO:0081435"}


id: GO:0009183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate biosynthetic process","termid":"GO:0009136"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009183"}


id: PR:Q09896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A brain protein 44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14154:SF2","PRO:DNx","OMA:SCHPO00081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.09","secondary_identifiers":["UniProtKB:Q09896"],"synonyms":[{"name":"MPC2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MPC2","type":"exact"}],"termid":"PR:Q09896"}


id: PBO:0048701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase domain containing 5","termid":"PBO:0048701"}


id: PBO:0066794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 93","termid":"PBO:0066794"}


id: GO:0043319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated cytotoxicity","termid":"GO:0001916"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell degranulation","termid":"GO:0043317"},{"relation_name":"positively_regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of cytotoxic T cell degranulation","synonyms":[{"name":"activation of cytotoxic T cell degranulation","type":"narrow"},{"name":"positive regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"positive regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"positive regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"positive regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"positive regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"positive regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"positive regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"},{"name":"stimulation of cytotoxic T cell degranulation","type":"narrow"},{"name":"up regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"up-regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"upregulation of cytotoxic T cell degranulation","type":"exact"}],"termid":"GO:0043319"}


id: PBO:0065561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 1","termid":"PBO:0065561"}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_02023","SJAG_00212","SJAG_01817","SJAG_00136","SJAG_03406","SJAG_01397","SJAG_01447","SJAG_00516","SJAG_01913","SJAG_01471","SJAG_04955","SJAG_05294","SJAG_02782","SJAG_04015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84271,86056,86373,88237,91841,92800,95088,96099,96176,97808,98842,100088,106061,114850],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: GO:0036349
data:
  {"annotated_genes":["SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99729],"is_not":false,"summary":null,"term":"GO:0036349"}]},"cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["PMID:22098069","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"galactose-specific flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098611"],"synonyms":[{"name":"cell-cell adhesion involved in galactose-specific flocculation","type":"exact"}],"termid":"GO:0036349","terms_by_termid":{"GO:0036349":null}}


id: GO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-transporting ATP synthase, coupling factor CF(0) (obsolete GO:0005755)","synonyms":[{"name":"hydrogen-transporting ATP synthase, coupling factor CF(0)","type":"exact"}],"termid":"GO:0005755"}


id: FYPO:0001949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"},{"relation_name":"is_a","term_name":"increased level of substance in cytosol","termid":"FYPO:0001948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cytosolic calcium level","synonyms":[{"name":"increased cytosolic calcium ion level","type":"exact"},{"name":"increased cytosolic calcium ion level during vegetative growth","type":"exact"},{"name":"increased cytosolic calcium level during mitotic cell cycle","type":"related"},{"name":"increased level of calcium ions in cytosol","type":"exact"},{"name":"increased levels of free cytosolic calcium","type":"exact"}],"termid":"FYPO:0001949"}


id: PBO:0084705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis; involved in maturation of Grx5p and Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia","termid":"PBO:0084705"}


id: GO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H dehydrogenase (obsolete GO:0008751)","synonyms":[{"name":"NAD(P)H dehydrogenase","type":"exact"}],"termid":"GO:0008751"}


id: PBO:0047518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZ family zinc finger 1","termid":"PBO:0047518"}


id: PBO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_checkpoint","termid":"PBO:0030502"}


id: GO:0033133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucokinase activity","termid":"GO:0033131"},{"relation_name":"is_a","term_name":"positive regulation of hexokinase activity","termid":"GO:1903301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of glucokinase activity","synonyms":[{"name":"glucokinase activator","type":"narrow"},{"name":"stimulation of glucokinase activity","type":"narrow"},{"name":"up regulation of glucokinase activity","type":"exact"},{"name":"up-regulation of glucokinase activity","type":"exact"},{"name":"upregulation of glucokinase activity","type":"exact"}],"termid":"GO:0033133"}


id: GO:0034464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ciliary protein complex involved in cilium biogenesis. It consists of at least seven Bardet-Biedl syndrome (BBS) proteins and BBIP10. It moves in association with IFT trains through cilia (likely as an IFT-A/B adaptor or cargo), and is required for the integrity of IFT-A and IFT-B.","definition_xrefs":["PMID:26498262","GOC:BHF","PMID:17574030","GOC:cilia","PMID:15231740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BBSome","synonyms":[{"name":"Bardet-Biedl syndrome complex","type":"exact"}],"termid":"GO:0034464"}


id: GO:1905376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26722473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"is_a","term_name":"negative regulation of electron transfer activity","termid":"GO:1904733"},{"relation_name":"is_a","term_name":"regulation of cytochrome-c oxidase activity","termid":"GO:1904959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of cytochrome-c oxidase activity","synonyms":[{"name":"down regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"down regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"down regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"down regulation of cytochrome a3 activity","type":"narrow"},{"name":"down regulation of cytochrome aa3 activity","type":"narrow"},{"name":"down regulation of cytochrome c oxidase activity","type":"exact"},{"name":"down regulation of cytochrome oxidase activity","type":"related"},{"name":"down regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"down regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"down regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"down regulation of indophenol oxidase","type":"narrow"},{"name":"down regulation of indophenolase","type":"narrow"},{"name":"down regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"down-regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"down-regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"down-regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"down-regulation of cytochrome a3 activity","type":"narrow"},{"name":"down-regulation of cytochrome aa3 activity","type":"narrow"},{"name":"down-regulation of cytochrome c oxidase activity","type":"exact"},{"name":"down-regulation of cytochrome oxidase activity","type":"related"},{"name":"down-regulation of cytochrome-c oxidase activity","type":"exact"},{"name":"down-regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"down-regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"down-regulation of indophenol oxidase","type":"narrow"},{"name":"down-regulation of indophenolase","type":"narrow"},{"name":"down-regulation of warburg's respiratory enzyme activity","type":"related"},{"name":"downregulation of NADH cytochrome c oxidase","type":"exact"},{"name":"downregulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"downregulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"downregulation of cytochrome a3 activity","type":"narrow"},{"name":"downregulation of cytochrome aa3 activity","type":"narrow"},{"name":"downregulation of cytochrome c oxidase activity","type":"exact"},{"name":"downregulation of cytochrome oxidase activity","type":"related"},{"name":"downregulation of cytochrome-c oxidase activity","type":"exact"},{"name":"downregulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"downregulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"downregulation of indophenol oxidase","type":"narrow"},{"name":"downregulation of indophenolase","type":"narrow"},{"name":"downregulation of warburg's respiratory enzyme activity","type":"related"},{"name":"inhibition of NADH cytochrome c oxidase","type":"narrow"},{"name":"inhibition of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"inhibition of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"inhibition of cytochrome a3 activity","type":"narrow"},{"name":"inhibition of cytochrome aa3 activity","type":"narrow"},{"name":"inhibition of cytochrome c oxidase activity","type":"narrow"},{"name":"inhibition of cytochrome oxidase activity","type":"related"},{"name":"inhibition of cytochrome-c oxidase activity","type":"narrow"},{"name":"inhibition of ferrocytochrome c oxidase","type":"narrow"},{"name":"inhibition of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"inhibition of indophenol oxidase","type":"narrow"},{"name":"inhibition of indophenolase","type":"narrow"},{"name":"inhibition of warburg's respiratory enzyme activity","type":"related"},{"name":"negative regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"negative regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"negative regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"negative regulation of cytochrome a3 activity","type":"narrow"},{"name":"negative regulation of cytochrome aa3 activity","type":"narrow"},{"name":"negative regulation of cytochrome c oxidase activity","type":"exact"},{"name":"negative regulation of cytochrome oxidase activity","type":"related"},{"name":"negative regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"negative regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"negative regulation of indophenol oxidase","type":"narrow"},{"name":"negative regulation of indophenolase","type":"narrow"},{"name":"negative regulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1905376"}


id: PBO:0078785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-2","termid":"PBO:0078785"}


id: GO:0051766
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008440"},{"annotations":[94971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol trisphosphate + ATP = inositol tetrakisphosphate + ADP + H+.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol trisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IP3K","type":"broad"}],"termid":"GO:0051766","terms_by_termid":{"GO:0000823":null,"GO:0008440":null}}


id: PBO:0026732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_mitotic_metaphase","termid":"PBO:0026732"}


id: PR:O74546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh3 gene.","definition_xrefs":["UniProtKB:O74546","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.07","synonyms":[{"name":"Spom972h-omh3","type":"exact"}],"termid":"PR:O74546"}


id: GO:1990830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukemia inhibitory factor stimulus.","definition_xrefs":["PMID:12801913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to leukemia inhibitory factor","termid":"GO:1990823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leukemia inhibitory factor","synonyms":[{"name":"cellular response to CDF","type":"exact"},{"name":"cellular response to cholinergic differentiation factor","type":"exact"}],"termid":"GO:1990830"}


id: GO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a N-acetylgalactosamine from one side of a membrane to the other. N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0005463"}


id: PBO:0051621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 3","termid":"PBO:0051621"}


id: FYPO:0006860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA replication is decreased in ribosomal DNA repeats.","definition_xrefs":["PMID:30796050","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic DNA replication at rDNA","synonyms":[{"name":"decreased DNA replication at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased mitotic DNA replication at rDNA during vegetative growth","type":"exact"},{"name":"decreased mitotic DNA replication at ribosomal DNA","type":"exact"},{"name":"reduced mitotic DNA replication at rDNA","type":"exact"}],"termid":"FYPO:0006860"}


id: GO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein-FAD linkage via 1'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"protein-FAD linkage","termid":"GO:0018293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-FAD linkage via 1'-(8alpha-FAD)-L-histidine","termid":"GO:0018297"}


id: GO:0033445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"AGU codon-amino acid adaptor activity","synonyms":[{"name":"AGT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033445"}


id: SO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region present in the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intramembrane_polypeptide_region","secondary_identifiers":["BS:00156"],"synonyms":[{"name":"intramembrane","type":"related"},{"name":"intramembrane polypeptide region","type":"exact"}],"termid":"SO:0001075"}


id: PBO:0055254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2681","termid":"PBO:0055254"}


id: GO:0098733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is part of or has some part in a hemidesmosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"hemidesmosome associated protein complex","termid":"GO:0098733"}


id: PBO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 21","termid":"PBO:0046640"}


id: GO:0099062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic early endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic early endosome membrane (obsolete GO:0099062)","termid":"GO:0099062"}


id: PBO:0036197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0036197"}


id: PR:Q9P7Q5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1834.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1834.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.10c","synonyms":[{"name":"Spom972h-SPAC1834.10c","type":"exact"}],"termid":"PR:Q9P7Q5"}


id: PBO:0069691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 970, pseudogene","termid":"PBO:0069691"}


id: GO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ITP, inosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009206"},{"relation_name":"is_a","term_name":"ITP metabolic process","termid":"GO:0046041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ITP biosynthetic process","synonyms":[{"name":"ITP anabolism","type":"exact"},{"name":"ITP biosynthesis","type":"exact"},{"name":"ITP formation","type":"exact"},{"name":"ITP synthesis","type":"exact"}],"termid":"GO:0046042"}


id: GO:1904553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonic acid","termid":"GO:1904552"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to arachidonic acid","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis to arachidonic acid","synonyms":[{"name":"down regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"down-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"downregulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"inhibition of chemotaxis to arachidonic acid","type":"narrow"}],"termid":"GO:1904553"}


id: PBO:0055382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2812","termid":"PBO:0055382"}


id: PBO:0069913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1205, pseudogene","termid":"PBO:0069913"}


id: FYPO:0002052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal sporulation frequency","synonyms":[{"name":"normal ascospore formation frequency","type":"exact"},{"name":"normal sporulation occurrence","type":"exact"}],"termid":"FYPO:0002052"}


id: FYPO:0002131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects an interaction between a protein and RNA. One of the relevant gene product may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"protein-RNA interaction phenotype","synonyms":[{"name":"RNA binding phenotype","type":"exact"},{"name":"RNA-protein interaction phenotype","type":"exact"},{"name":"fission yeast RNA binding phenotype","type":"exact"},{"name":"fission yeast protein-RNA interaction phenotype","type":"exact"}],"termid":"FYPO:0002131"}


id: PBO:0055654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3094","termid":"PBO:0055654"}


id: PBO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.17.4","termid":"PBO:0001861"}


id: PBO:0040487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 3","termid":"PBO:0040487"}


id: PBO:0082703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque of the spindle pole body; involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation; SPO21 has a paralog, YSW1, that arose from the whole genome duplication","termid":"PBO:0082703"}


id: GO:0032147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive protein kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase activity","synonyms":[{"name":"protein kinase activation","type":"related"}],"termid":"GO:0032147"}


id: PBO:0017767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in histone acetylation","termid":"PBO:0017767"}


id: PATO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs earlier than the natural start time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced phase","termid":"PATO:0000500"}


id: GO:0019434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate, an aromatic hydrocarbon.","definition_xrefs":["MetaCyc:DIGLUCODIACETYL-DOCOSANOATE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sophorosyloxydocosanoate metabolic process","synonyms":[{"name":"sophorosyloxydocosanoate metabolism","type":"exact"}],"termid":"GO:0019434"}


id: PBO:0065893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39B, member RAS oncogene family","termid":"PBO:0065893"}


id: PBO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft2 (predicted)","termid":"PBO:0005038"}


id: PBO:0072185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 1","termid":"PBO:0072185"}


id: PBO:0084871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to mammalian apoptosis mediator proteins; null mutation prevents induction of apoptosis by overproduction of metacaspase Mca1p","termid":"PBO:0084871"}


id: PBO:0004825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C (predicted)","termid":"PBO:0004825"}


id: PBO:0069621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 898, pseudogene","termid":"PBO:0069621"}


id: GO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The resumption of the Saccharomyces mitotic cell division cycle by pheromone-arrested cells that have not mated.","definition_xrefs":["GOC:krc","PMID:9927449"],"gene_count":0,"genotype_count":0,"name":"obsolete re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces) (obsolete GO:0046615)","synonyms":[{"name":"re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046615"}


id: GO:0010026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a trichome cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","PMID:9367433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome differentiation","secondary_identifiers":["GO:0048271"],"synonyms":[{"name":"trichome cell differentiation","type":"exact"}],"termid":"GO:0010026"}


id: GO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = acetaldehyde + formate.","definition_xrefs":["EC:4.1.2.36","RHEA:17909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"lactate aldolase activity","secondary_identifiers":["KEGG_REACTION:R00753","MetaCyc:LACTATE-ALDOLASE-RXN"],"synonyms":[{"name":"(S)-lactate acetaldehyde-lyase (formate-forming)","type":"related"},{"name":"(S)-lactate acetaldehyde-lyase activity","type":"related"},{"name":"lactate synthase activity","type":"related"}],"termid":"GO:0050041"}


id: PBO:0083981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress","termid":"PBO:0083981"}


id: PATO:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000000 pato (obsolete PATO:0000000)","termid":"PATO:0000000"}


id: PBO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 5","termid":"PBO:0075175"}


id: PBO:0074702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 71B","termid":"PBO:0074702"}


id: PBO:0012838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-to-5' phosphorolytic exoribonuclease Rrp41","termid":"PBO:0012838"}


id: PBO:0051727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor family member 2B","termid":"PBO:0051727"}


id: GO:0010951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"},{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endopeptidase activity","termid":"GO:0010951"}


id: GO:0033955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which copies of the mitochondrial genome are distributed into daughter mitochondria upon mitochondrial fission.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial DNA inheritance (obsolete GO:0033955)","synonyms":[{"name":"mitochondrial DNA segregation","type":"related"},{"name":"mitochondrial chromosome segregation","type":"related"}],"termid":"GO:0033955"}


id: PBO:0035994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_movement_within_plasma_membrane_during_vegetative_growth","termid":"PBO:0035994"}


id: FYPO:0001963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to papulacandin B","synonyms":[{"name":"resistance to papulacandin B during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin B during vegetative growth","type":"exact"},{"name":"resistant to papulacandin B","type":"exact"}],"termid":"FYPO:0001963"}


id: PBO:0040384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting accessory protein 2","termid":"PBO:0040384"}


id: PBO:0057511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 629","termid":"PBO:0057511"}


id: PBO:0052667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 35","termid":"PBO:0052667"}


id: PATO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000115 absolute temperature sensitivity (obsolete PATO:0000115)","termid":"PATO:0000115"}


id: PBO:0004870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase III","termid":"PBO:0004870"}


id: PBO:0091536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPM1","termid":"PBO:0091536"}


id: GO:1900103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"activation of ER unfolded protein response","type":"exact"},{"name":"activation of SREBP-mediated signalling pathway","type":"related"},{"name":"activation of endoplasmic reticulum unfolded protein response","type":"narrow"},{"name":"activation of erUPR","type":"exact"},{"name":"positive regulation of ER unfolded protein response","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"positive regulation of erUPR","type":"exact"},{"name":"up regulation of ER unfolded protein response","type":"exact"},{"name":"up regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up regulation of erUPR","type":"exact"},{"name":"up-regulation of ER unfolded protein response","type":"exact"},{"name":"up-regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up-regulation of erUPR","type":"exact"},{"name":"upregulation of ER unfolded protein response","type":"exact"},{"name":"upregulation of SREBP-mediated signalling pathway","type":"related"},{"name":"upregulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"upregulation of erUPR","type":"exact"}],"termid":"GO:1900103"}


id: PBO:0083577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YFR035C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083577"}


id: GO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"negative regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of GABA reuptake","type":"exact"},{"name":"negative regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051949"}


id: GO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycoside in which the sugar group is galactose.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galactoside binding","termid":"GO:0016936"}


id: PBO:0069819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1105, pseudogene","termid":"PBO:0069819"}


id: GO:0043545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"exact"},{"name":"Moco metabolism","type":"exact"},{"name":"molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0043545"}


id: GO:1904096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","PMID:22389722","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein tyrosine phosphatase complex","termid":"GO:1904096"}


id: PBO:0057923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3648-2","termid":"PBO:0057923"}


id: GO:0080101
data:
  {"annotated_genes":["SJAG_00812"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105471],"is_not":false,"summary":null,"term":"GO:0080101"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-dimethylethanolamine = S-adenosyl-L-homocysteine + phosphatidylcholine.","definition_xrefs":["EC:2.1.1.71","PMID:19366698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01320","MetaCyc:RXN4FS-2","RHEA:32739"],"termid":"GO:0080101","terms_by_termid":{"GO:0080101":null}}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: PBO:0034400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_sequence_feature_(obsolete_requires_sequence_feature)","termid":"PBO:0034400"}


id: PBO:0044401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 63, pseudogene","termid":"PBO:0044401"}


id: PBO:0062574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 3","termid":"PBO:0062574"}


id: PBO:0035794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_mitosis","termid":"PBO:0035794"}


id: PR:O74478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1840.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.05c","synonyms":[{"name":"PGM 3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PRM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1840.05c","type":"exact"},{"name":"phosphoglucomutase 3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74478"}


id: SO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_polycistronic_transcript","termid":"SO:0000690"},{"relation_name":"transcribed_to","term_name":"dicistronic_transcript","termid":"SO:0000079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_transcript","synonyms":[{"name":"gene with dicistronic transcript","type":"exact"}],"termid":"SO:0000692"}


id: PBO:0049338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 3","termid":"PBO:0049338"}


id: PBO:0078399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 9-1","termid":"PBO:0078399"}


id: PBO:0077368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 107","termid":"PBO:0077368"}


id: PBO:0048833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 1 (putative)","termid":"PBO:0048833"}


id: PBO:0053804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1061","termid":"PBO:0053804"}


id: PBO:0052392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin associated protein 3","termid":"PBO:0052392"}


id: PBO:0067539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 684, pseudogene","termid":"PBO:0067539"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: PBO:0077633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 1","termid":"PBO:0077633"}


id: SO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which thymine is bound to the ribose ring.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribothymidine","termid":"SO:0001232"}


id: PBO:0063255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDHB1 antisense RNA 1","termid":"PBO:0063255"}


id: PBO:0076297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNE1 antisense RNA 1","termid":"PBO:0076297"}


id: GO:1902208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bacterial-type flagellum assembly.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"bacterial-type flagellum assembly","termid":"GO:0044780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of bacterial-type flagellum assembly","synonyms":[{"name":"regulation of bacterial flagellum assembly","type":"exact"}],"termid":"GO:1902208"}


id: PBO:0066188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 11","termid":"PBO:0066188"}


id: GO:0019813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex composed of two subunits, Res and Mod, that functions as an endonuclease and cleaves DNA. Cleavage will only occur when there are two un-methylated copies of a specific recognition site in an inverse orientation on the DNA. Cleavage occurs at a specific distance away from one of the recognition sites. The Mod subunit can act alone as a methyltansferase. DNA restriction systems such as this are used by bacteria to defend against phage and other foreign DNA that may enter a cell.","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease complex","synonyms":[{"name":"type III restriction enzyme complex","type":"exact"}],"termid":"GO:0019813"}


id: PBO:0087856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator for GABA-dependent induction of GABA genes; binds to DNA elements found in the promoters of target genes and increases their expression in the presence of GABA (gamma-aminobutyrate); zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type; localized to the nucleus; examples of GABA genes include UGA1, UGA2, and UGA4","termid":"PBO:0087856"}


id: PBO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge","termid":"PBO:0001394"}


id: GO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in B cells.","definition_xrefs":["PMID:16460922","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction","synonyms":[{"name":"B lymphocyte tolerance induction","type":"exact"},{"name":"B-cell tolerance induction","type":"exact"},{"name":"B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002514"}


id: PR:O94517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02652","PRO:DNx","PANTHER:PTHR11599:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.16","secondary_identifiers":["UniProtKB:O94517"],"synonyms":[{"name":"Spom972h-PSMA6","type":"exact"}],"termid":"PR:O94517"}


id: GO:0014034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a neural crest cell.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate commitment","termid":"GO:0048865"},{"relation_name":"part_of","term_name":"neural crest formation","termid":"GO:0014029"},{"relation_name":"part_of","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate commitment","termid":"GO:0014034"}


id: GO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process that results in the formation of one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells during the various stages of oogenesis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum","synonyms":[{"name":"ovarian follicle antrum/follicular fluid biosynthesis","type":"exact"},{"name":"ovarian follicle antrum/follicular fluid formation","type":"exact"}],"termid":"GO:0001548"}


id: PBO:0078806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 23-1","termid":"PBO:0078806"}


id: GO:0048398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an intermediate mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate specification","synonyms":[{"name":"intermediate mesoderm cell fate specification","type":"exact"}],"termid":"GO:0048398"}


id: PBO:0111882
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat protein","termid":"PBO:0111882"}


id: SO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region located within an inversion site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_site_part","synonyms":[{"name":"inversion site part","type":"exact"}],"termid":"SO:0001048"}


id: GO:1902103
data:
  {"annotated_genes":["SJAG_04126","SJAG_01330","SJAG_01837","SJAG_04259","SJAG_03327","SJAG_01082","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94867],"is_not":false,"summary":null,"term":"GO:1902103"},{"annotations":[102484,110667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[102485,97964,112832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[109971],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97499],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of meiotic cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"is_a","term_name":"negative regulation of meiotic chromosome separation","termid":"GO:1905133"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"down regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"down-regulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"downregulation of meiotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of metaphase/anaphase transition of meiotic cell cycle","type":"exact"},{"name":"inhibition of meiotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of metaphase/anaphase transition of meiotic cell cycle","type":"narrow"},{"name":"negative regulation of meiotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:1902103","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: FYPO:0000797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tert-butyl hydroperoxide (TBHP or t-BOOH). Cells stop growing (and may die) at a concentration of tert-butyl hydroperoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tert-butyl hydroperoxide","synonyms":[{"name":"hypersensitive to tert-butyl hydroperoxide","type":"exact"},{"name":"sensitive to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"sensitive to TBHP","type":"exact"},{"name":"sensitive to t-BOOH","type":"exact"},{"name":"sensitive to tert-butyl hydroperoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to tert-butyl hydroperoxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000797"}


id: PBO:0049729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis A virus cellular receptor 1","termid":"PBO:0049729"}


id: PBO:0045989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 3","termid":"PBO:0045989"}


id: PBO:0079444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 2","termid":"PBO:0079444"}


id: GO:0140018
data:
  {"annotated_genes":["SJAG_04756","SJAG_00579","SJAG_04452","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91646,105679,106341,110157],"is_not":false,"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"Any process that modulates the ability of the cytoplasmic translational apparatus to interpret the genetic code.","definition_xrefs":["PMID:22768388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translational fidelity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140018","terms_by_termid":{"GO:0140018":null}}


id: PBO:0007772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster biogenesis protein (predicted)","termid":"PBO:0007772"}


id: PBO:0077827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member F","termid":"PBO:0077827"}


id: PBO:0040915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 19","termid":"PBO:0040915"}


id: PBO:0041477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 68","termid":"PBO:0041477"}


id: GO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP biosynthetic process (obsolete GO:0030818)","synonyms":[{"name":"down regulation of cAMP biosynthetic process","type":"exact"},{"name":"down-regulation of cAMP biosynthetic process","type":"exact"},{"name":"downregulation of cAMP biosynthetic process","type":"exact"},{"name":"inhibition of cAMP biosynthetic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"negative regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"negative regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"negative regulation of cAMP anabolism","type":"exact"},{"name":"negative regulation of cAMP biosynthesis","type":"exact"},{"name":"negative regulation of cAMP formation","type":"exact"},{"name":"negative regulation of cAMP synthesis","type":"exact"},{"name":"negative regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"negative regulation of cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0030818"}


id: GO:2000819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nucleotide-excision repair.","definition_xrefs":["GOC:jp","PMID:18836076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleotide-excision repair","synonyms":[{"name":"regulation of NER","type":"exact"},{"name":"regulation of interstrand crosslink repair","type":"related"},{"name":"regulation of intrastrand cross-link repair","type":"related"},{"name":"regulation of pyrimidine-dimer repair, DNA damage excision","type":"exact"}],"termid":"GO:2000819"}


id: GO:0000753
data:
  {"annotated_genes":["SJAG_02864","SJAG_02989","SJAG_01993","SJAG_02700","SJAG_01943","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88695,84489,94467,95067,95146,110494],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"}]},"cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo conjugation cellular fusion.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"cell morphogenesis involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007332"],"synonyms":[{"name":"shmoo orientation","type":"narrow"},{"name":"shmooing","type":"narrow"}],"termid":"GO:0000753","terms_by_termid":{"GO:1904600":null}}


id: PBO:0040035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 2","termid":"PBO:0040035"}


id: PBO:0058425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4795","termid":"PBO:0058425"}


id: PBO:0058821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7978","termid":"PBO:0058821"}


id: PBO:0071100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 102","termid":"PBO:0071100"}


id: GO:0051465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"down regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"down-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"downregulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"inhibition of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"negative regulation of CRF secretion","type":"exact"},{"name":"negative regulation of CRH secretion","type":"exact"},{"name":"negative regulation of corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0051465"}


id: GO:0070368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"positively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte differentiation","synonyms":[{"name":"activation of hepatocyte differentiation","type":"narrow"},{"name":"positive regulation of liver cell differentiation","type":"exact"},{"name":"stimulation of hepatocyte differentiation","type":"narrow"},{"name":"up regulation of hepatocyte differentiation","type":"exact"},{"name":"up-regulation of hepatocyte differentiation","type":"exact"},{"name":"upregulation of hepatocyte differentiation","type":"exact"}],"termid":"GO:0070368"}


id: PBO:0029453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_cell","termid":"PBO:0029453"}


id: PBO:0090269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP II complex subunit Trs65","termid":"PBO:0090269"}


id: GO:0015391
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91722,84677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleobase(out) + cation(out) = nucleobase(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transmembrane transporter activity","termid":"GO:0015205"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nucleobase:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase:cation symporter activity","type":"broad"}],"termid":"GO:0015391","terms_by_termid":{"GO:0015505":null}}


id: PBO:0064457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POGLUT2 pseudogene 1","termid":"PBO:0064457"}


id: FYPO:0008182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the Spt5 CTD domain is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased Spt5-CTD binding","termid":"FYPO:0008182"}


id: PBO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1 (predicted)","termid":"PBO:0001582"}


id: PBO:0086877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcriptional activator; interacts with G1-specific transcription factor MBF and G1-specific promoters; MSA2 has a paralog, MSA1, that arose from the whole genome duplication","termid":"PBO:0086877"}


id: FYPO:0002679
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115345,115341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"reduced protein phosphorylation","type":"exact"}],"termid":"FYPO:0002679","terms_by_termid":{"FYPO:0001838":null}}


id: PBO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resistance_to_chemical_during_vegetative_growth","termid":"PBO:0031304"}


id: GO:0009066
data:
  {"annotated_genes":["SJAG_01955","SJAG_04459","SJAG_04688","SJAG_00830","SJAG_03141","SJAG_00881","SJAG_00309","SJAG_00419","SJAG_03163","SJAG_00869","SJAG_03659","SJAG_02276","SJAG_00395","SJAG_03306","SJAG_02388","SJAG_02972","SJAG_00234","SJAG_02290","SJAG_04549","SJAG_02832","SJAG_01574","SJAG_03614","SJAG_03881","SJAG_01630","SJAG_00502","SJAG_00714","SJAG_03102","SJAG_03152","SJAG_01466","SJAG_00432","SJAG_03671","SJAG_04305","SJAG_04425","SJAG_02293","SJAG_03556","SJAG_03692","SJAG_02450","SJAG_02689","SJAG_01404","SJAG_04042","SJAG_01061","SJAG_03312","SJAG_03712","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64738,106689,107270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[106978,98330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[107995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[102157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[91126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006528"},{"annotations":[107996,84080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[107997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[102158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006531"},{"annotations":[98331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[108250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[96833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[96161,91749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[85983,108613,88841,95182,96818,103180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[95183,103181,88842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[92856,89167,86558,92533,97366,98096,105887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009085"},{"annotations":[105888,89168,109634,92857,97367,98097,92534,86559,94524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[111941,102160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"},{"annotations":[102161,107272,98060,99773,111942,108149,86236,92823,94588,94704,98901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[99566,108883,106856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"},{"annotations":[97002,102162,66956,106857,111943,108150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[99955,90382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic 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family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aspartate family amino acid metabolism","type":"exact"}],"termid":"GO:0009066","terms_by_termid":{"GO:0006528":null,"GO:0006529":null,"GO:0006530":null,"GO:0006531":null,"GO:0006532":null,"GO:0006533":null,"GO:0006555":null,"GO:0006567":null,"GO:0009085":null,"GO:0009086":null,"GO:0009088":null,"GO:0009089":null,"GO:0019266":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0033512":null,"GO:0070981":null,"GO:0071266":null,"GO:1990355":null}}


id: GO:0033670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NAD+ kinase activity","synonyms":[{"name":"NAD kinase regulator","type":"narrow"},{"name":"regulation of NAD kinase activity","type":"exact"}],"termid":"GO:0033670"}


id: PBO:0090680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible histone H3 lysine methyltransferase Set3","termid":"PBO:0090680"}


id: PBO:0075181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 11","termid":"PBO:0075181"}


id: PATO:0000616
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's lacking symmetry.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrical","synonyms":[{"name":"asymmetric","type":"exact"},{"name":"asymmetry","type":"exact"}],"termid":"PATO:0000616"}


id: GO:0102659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 4-methylthiobutylhydroximate = H+ + 3-methylthiopropyl-desulfoglucosinolate + UDP.","definition_xrefs":["EC:2.4.1.195","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose: 4-methylthiobutylhydroximate S-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-2208"],"termid":"GO:0102659"}


id: PR:P42656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P42656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein rad24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.02c","synonyms":[{"name":"Spom972h-rad24","type":"exact"}],"termid":"PR:P42656"}


id: PBO:0017903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad18 homolog ubiquitin protein ligase E3, Rhp18","termid":"PBO:0017903"}


id: GO:0098574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"cytoplasmic side of lysosomal membrane","synonyms":[{"name":"external leaflet of lysosomal membrane","type":"exact"},{"name":"external side of lysosomal membrane","type":"exact"}],"termid":"GO:0098574"}


id: PBO:0055513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2947","termid":"PBO:0055513"}


id: PBO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4","termid":"PBO:0060501"}


id: PBO:0077003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 5","termid":"PBO:0077003"}


id: PBO:0017921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD transmembrane transporter (predicted)","termid":"PBO:0017921"}


id: RO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of directly develops from","direct_ancestors":[{"relation_name":"is_a","term_name":"develops_into","termid":"RO:0002203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_develops_into","termid":"RO:0002210"}


id: GO:0009864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid involved in induced systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"},{"relation_name":"part_of","term_name":"induced systemic resistance","termid":"GO:0009682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"induced systemic resistance, jasmonic acid mediated signaling pathway","synonyms":[{"name":"induced systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (induced systemic resistance)","type":"exact"}],"termid":"GO:0009864"}


id: GO:0106062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exit from meiosis.","definition_xrefs":["PMID:11493649","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exit from meiosis","termid":"GO:0106060"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle phase transition","termid":"GO:1901995"},{"relation_name":"positively_regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of exit from meiosis","termid":"GO:0106062"}


id: PBO:0016533
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab5","termid":"PBO:0016533"}


id: PBO:0029524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spheroid_vegetative_cell","termid":"PBO:0029524"}


id: PBO:0064182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XI, pseudogene","termid":"PBO:0064182"}


id: PBO:0091519
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae Hys2","termid":"PBO:0091519"}


id: PBO:0091957
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HEF3","termid":"PBO:0091957"}


id: GO:0033752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pentane-2,4-dione + O2 = acetate + 2-oxopropanal.","definition_xrefs":["EC:1.13.11.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetylacetone-cleaving enzyme activity","secondary_identifiers":["RHEA:12877"],"synonyms":[{"name":"Dke1","type":"related"},{"name":"acetylacetone dioxygenase activity","type":"related"},{"name":"acetylacetone-cleaving enzyme","type":"related"},{"name":"acetylacetone:oxygen oxidoreductase activity","type":"related"},{"name":"diketone cleaving dioxygenase activity","type":"related"},{"name":"diketone cleaving enzyme","type":"related"}],"termid":"GO:0033752"}


id: GO:0002696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of leukocyte activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte activation","synonyms":[{"name":"activation of leukocyte activation","type":"narrow"},{"name":"positive regulation of immune cell activation","type":"exact"},{"name":"positive regulation of leucocyte activation","type":"exact"},{"name":"stimulation of leukocyte activation","type":"narrow"},{"name":"up regulation of leukocyte activation","type":"exact"},{"name":"up-regulation of leukocyte activation","type":"exact"},{"name":"upregulation of leukocyte activation","type":"exact"}],"termid":"GO:0002696"}


id: GO:0098703
data:
  {"annotated_genes":["SJAG_02877","SJAG_04668","SJAG_01090","SJAG_03631","SJAG_00296","SJAG_04551","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88531,88585,95793,110607],"is_not":false,"summary":null,"term":"GO:0098703"},{"annotations":[109546,87404],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[98315],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion import","termid":"GO:0070509"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"},{"relation_name":"is_a","term_name":"calcium ion import into cytosol","termid":"GO:1902656"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990035"],"synonyms":[{"name":"calcium ion import into cell","type":"exact"},{"name":"calcium ion uptake into cell","type":"exact"}],"termid":"GO:0098703","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: PATO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsolateral orientation","synonyms":[{"name":"dorsolaterally directed","type":"exact"}],"termid":"PATO:0002496"}


id: PR:Q9P6S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6S4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.03","synonyms":[{"name":"Spom972h-meu25","type":"exact"}],"termid":"PR:Q9P6S4"}


id: PBO:0005843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof7","termid":"PBO:0005843"}


id: GO:1904406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:11991626","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"negatively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide metabolic process","synonyms":[{"name":"down regulation of nitric oxide metabolic process","type":"exact"},{"name":"down regulation of nitric oxide metabolism","type":"exact"},{"name":"down-regulation of nitric oxide metabolic process","type":"exact"},{"name":"down-regulation of nitric oxide metabolism","type":"exact"},{"name":"downregulation of nitric oxide metabolic process","type":"exact"},{"name":"downregulation of nitric oxide metabolism","type":"exact"},{"name":"inhibition of nitric oxide metabolic process","type":"narrow"},{"name":"inhibition of nitric oxide metabolism","type":"narrow"},{"name":"negative regulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904406"}


id: GO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of abscisic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of abscisic acid levels in host (obsolete GO:0075343)","termid":"GO:0075343"}


id: GO:0051616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of histamine uptake","synonyms":[{"name":"regulation of histamine import","type":"exact"}],"termid":"GO:0051616"}


id: _global:input_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has input","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"input_of","secondary_identifiers":["RO:0002352"],"termid":"_global:input_of"}


id: GO:0031271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a pseudopodium from the lateral area of a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lateral pseudopodium assembly","synonyms":[{"name":"lateral pseudopodium formation","type":"related"}],"termid":"GO:0031271"}


id: PBO:0078345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 11-1","termid":"PBO:0078345"}


id: PBO:0085615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085615"}


id: PBO:0034804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Skb5","termid":"PBO:0034804"}


id: GO:1990226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone methyltransferase enzyme.","definition_xrefs":["GOC:ame","PMID:19486527","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"histone methyltransferase binding","termid":"GO:1990226"}


id: PBO:0029897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination_during_vegetative_growth","termid":"PBO:0029897"}


id: PBO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3","termid":"PBO:0033815"}


id: PBO:0053346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 229","termid":"PBO:0053346"}


id: PBO:0085461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; recycles inorganic phosphate byproduct of glycosylation from ER and Golgi; involved in recycling of early Golgi glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0085461"}


id: SO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H- mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat3M","termid":"SO:0002158"}


id: FYPO:0006787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}


id: SO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genetic feature that encodes a trait used for artificial selection of a subpopulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selection_marker","synonyms":[{"name":"selectable marker","type":"exact"},{"name":"selectable_marker","type":"exact"},{"name":"selection marker","type":"exact"}],"termid":"SO:0002232"}


id: PBO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin-associated protein Pds5","termid":"PBO:0001234"}


id: GO:0090454
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of glutamate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"glutamate transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar glutamate import","type":"related"}],"termid":"GO:0090454","terms_by_termid":{"GO:0090515":null}}


id: PBO:0068734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 5, pseudogene","termid":"PBO:0068734"}


id: PBO:0056894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIDEAS antisense RNA 1","termid":"PBO:0056894"}


id: GO:0006088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate to acetyl-CoA (obsolete GO:0006088)","synonyms":[{"name":"acetate to acetyl-CoA","type":"exact"}],"termid":"GO:0006088"}


id: GO:0008472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidyl-L-lysine (or peptidyl-L-arginine) + H2O = peptide + L-lysine (or L-arginine). Function is activated by Co2+; inhibited by guanidinoethylmercaptosuccinic acid.","definition_xrefs":["EC:3.4.17.22"],"gene_count":0,"genotype_count":0,"name":"obsolete metallocarboxypeptidase D activity (obsolete GO:0008472)","synonyms":[{"name":"carboxypeptidase D (cattle, human, mouse, rat)","type":"related"},{"name":"gp180 (duck)","type":"related"},{"name":"metallocarboxypeptidase D activity","type":"exact"}],"termid":"GO:0008472"}


id: GO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm during mitosis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic mitotic chromosome (obsolete GO:0000231)","synonyms":[{"name":"cytoplasmic mitotic chromosome","type":"exact"}],"termid":"GO:0000231"}


id: PBO:0082250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the nascent polypeptide-associated complex (NAC); involved in protein sorting and translocation; associated with cytoplasmic ribosomes","termid":"PBO:0082250"}


id: PR:O42656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ric1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide exchange factor subunit ric1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.04c","synonyms":[{"name":"Spom972h-ric1","type":"exact"},{"name":"protein ric1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42656"}


id: GO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of intermediate filament polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of intermediate filament polymerization and/or depolymerization (obsolete GO:0045826)","synonyms":[{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045826"}


id: PBO:0052797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 37","termid":"PBO:0052797"}


id: PBO:0091126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein family with conserved tryptophans cysteines and tyrosines","termid":"PBO:0091126"}


id: PBO:0041800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 9","termid":"PBO:0041800"}


id: PBO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-16","termid":"PBO:0051434"}


id: PR:Q9UTI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gammaproteobacterial-type dihydroorotase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.03c","secondary_identifiers":["UniProtKB:Q9UTI0"],"synonyms":[{"name":"DHOase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gammaproteo-pyrC","type":"exact"}],"termid":"PR:Q9UTI0"}


id: GO:0031394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"positive regulation of unsaturated fatty acid biosynthetic process","termid":"GO:2001280"},{"relation_name":"positively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin biosynthetic process","synonyms":[{"name":"activation of prostaglandin biosynthetic process","type":"narrow"},{"name":"positive regulation of prostaglandin anabolism","type":"exact"},{"name":"positive regulation of prostaglandin biosynthesis","type":"exact"},{"name":"positive regulation of prostaglandin formation","type":"exact"},{"name":"positive regulation of prostaglandin synthesis","type":"exact"},{"name":"stimulation of prostaglandin biosynthetic process","type":"narrow"},{"name":"up regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"up-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"upregulation of prostaglandin biosynthetic process","type":"exact"}],"termid":"GO:0031394"}


id: GO:1990358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multifunctional supermolecular complex, containing several proteins with hemicellulase activity. Functions to hydrolyze hemicellulose.","definition_xrefs":["GOC:mengo_curators","PMID:16769147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"xylanosome","synonyms":[{"name":"xylanolytic complex","type":"exact"}],"termid":"GO:1990358"}


id: PBO:0050272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMGN3 antisense RNA 1","termid":"PBO:0050272"}


id: GO:0047986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + S(2-) = CoA + thioacetate.","definition_xrefs":["RHEA:16625","EC:2.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"hydrogen-sulfide S-acetyltransferase activity","secondary_identifiers":["MetaCyc:HYDROGEN-SULFIDE-S-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01850"],"synonyms":[{"name":"acetyl-CoA:hydrogen-sulfide S-acetyltransferase activity","type":"related"},{"name":"hydrogen-sulfide acetyltransferase activity","type":"related"},{"name":"hydrogen-sulphide S-acetyltransferase activity","type":"exact"}],"termid":"GO:0047986"}


id: SO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant of a codon resulting in the substitution of one amino acid for another in the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_substitution","synonyms":[{"name":"VAAST:amino_acid_substitution","type":"exact"},{"name":"amino acid substitution","type":"exact"}],"termid":"SO:0001606"}


id: PBO:0056371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8","termid":"PBO:0056371"}


id: SO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of an SVA mobile element.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVA_deletion","synonyms":[{"name":"SVA deletion","type":"exact"}],"termid":"SO:0002068"}


id: SO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the terminator codon (stop) is changed, resulting in an elongated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"feature_elongation","termid":"SO:0001907"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_lost","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:stoploss","type":"exact"},{"name":"Jannovar:stop_lost","type":"exact"},{"name":"Seattleseq:stop-lost","type":"exact"},{"name":"Seattleseq:stop-lost-near-splice","type":"related"},{"name":"VAAST:stop_lost","type":"exact"},{"name":"VAT:removedStop","type":"exact"},{"name":"VEP:stop_lost","type":"exact"},{"name":"snpEff:STOP_LOST","type":"exact"},{"name":"stop codon lost","type":"exact"},{"name":"stop lost","type":"exact"}],"termid":"SO:0001578"}


id: SO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one VJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_C_cluster","synonyms":[{"name":"(VJ)-C-CLUSTER","type":"related"},{"name":"VJ C cluster","type":"exact"}],"termid":"SO:0000489"}


id: PBO:0067333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 425, pseudogene","termid":"PBO:0067333"}


id: GO:0046874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quinolinate, the anion of quinolinic acid, also known as 2,3-pyridinedicarboxylic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"quinolinate metabolic process","synonyms":[{"name":"quinolinate metabolism","type":"exact"}],"termid":"GO:0046874"}


id: PBO:0086430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family","termid":"PBO:0086430"}


id: GO:1904639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a resveratrol stimulus.","definition_xrefs":["PMID:23555824","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to resveratrol","termid":"GO:1904638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to resveratrol","termid":"GO:1904639"}


id: GO:0120066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal part of the pylorus between the pyloric antrum and the pyloric sphincter.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric canal smooth muscle contraction","termid":"GO:0120066"}


id: GO:0047494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + CDP-ethanolamine = L-serine-phosphoethanolamine + CMP + H+.","definition_xrefs":["RHEA:22656","EC:2.7.8.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine-phosphoethanolamine synthase activity","secondary_identifiers":["MetaCyc:SERINE-PHOSPHOETHANOLAMINE-SYNTHASE-RXN","KEGG_REACTION:R02563"],"synonyms":[{"name":"CDP-ethanolamine:L-serine ethanolamine phosphotransferase activity","type":"related"},{"name":"serine ethanolamine phosphate synthetase activity","type":"related"},{"name":"serine ethanolamine phosphodiester synthase activity","type":"related"},{"name":"serine ethanolaminephosphotransferase activity","type":"related"},{"name":"serine-phosphinico-ethanolamine synthase activity","type":"related"},{"name":"serinephosphoethanolamine synthase activity","type":"related"}],"termid":"GO:0047494"}


id: GO:0071711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane organization","synonyms":[{"name":"basement membrane organisation","type":"exact"}],"termid":"GO:0071711"}


id: PBO:0082822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear protein that interacts with GTP-Gsp1p; stimulates nucleotide release from Gsp1p; involved in nuclear protein import; nucleotide release is inhibited by Yrb1p","termid":"PBO:0082822"}


id: GO:0045125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a bioactive lipid and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex. A bioactive lipid is a lipid for which changes in lipid levels result in functional consequences in a variety of cellular processes.","definition_xrefs":["PMID:12215548","PMID:18216770","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"bioactive lipid receptor activity","termid":"GO:0045125"}


id: PBO:0042449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 2","termid":"PBO:0042449"}


id: FYECO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Adenine was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000065 absence of adenine (obsolete FYECO:0000065)","termid":"FYECO:0000065"}


id: PBO:0111757
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide 3-kinase family protein","termid":"PBO:0111757"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GOC:mengo_curators","PMID:23826995","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: PBO:0049545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 8","termid":"PBO:0049545"}


id: PBO:0088553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp1","termid":"PBO:0088553"}


id: PBO:0078452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5","termid":"PBO:0078452"}


id: GO:0046147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process","termid":"GO:0046146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrahydrobiopterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrobiopterin catabolic process","type":"exact"},{"name":"tetrahydrobiopterin breakdown","type":"exact"},{"name":"tetrahydrobiopterin catabolism","type":"exact"},{"name":"tetrahydrobiopterin degradation","type":"exact"}],"termid":"GO:0046147"}


id: GO:0075332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0075332)","termid":"GO:0075332"}


id: PBO:0078105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC12 antisense RNA 1","termid":"PBO:0078105"}


id: PBO:0081369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 207","termid":"PBO:0081369"}


id: PBO:0051481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (VI)-22-1 (pseudogene)","termid":"PBO:0051481"}


id: PBO:0069092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 339, pseudogene","termid":"PBO:0069092"}


id: PBO:0068075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 380","termid":"PBO:0068075"}


id: PR:O13858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sle1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome protein sle1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.07","synonyms":[{"name":"SEG1-like eisosome protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sle1","type":"exact"}],"termid":"PR:O13858"}


id: GO:0052046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by one of the organisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via secreted substance (obsolete GO:0052046)","synonyms":[{"name":"modification of host morphology or physiology via effector molecule","type":"narrow"},{"name":"modification of host morphology or physiology via ellicitor","type":"narrow"}],"termid":"GO:0052046"}


id: PBO:0018017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor Ncb2 (predicted)","termid":"PBO:0018017"}


id: PBO:0081724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 652 pseudogene 1","termid":"PBO:0081724"}


id: PBO:0064077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 111","termid":"PBO:0064077"}


id: GO:2000458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"}


id: FYPO:0001299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which palmitoyl-CoA ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"abolished long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"abolished palmitoyl-CoA ligase activity","synonyms":[{"name":"abolished palmitoyl-CoA synthetase activity","type":"exact"},{"name":"palmitoyl-CoA ligase activity abolished","type":"exact"}],"termid":"FYPO:0001299"}


id: GO:0047262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galacturonate + 1,4-alpha-D-galacturonosyl(n) = 1,4-alpha-D-galacturonosyl(n+1) + UDP.","definition_xrefs":["MetaCyc:2.4.1.43-RXN","EC:2.4.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"polygalacturonate 4-alpha-galacturonosyltransferase activity","secondary_identifiers":["RHEA:13573","GO:0050375"],"synonyms":[{"name":"UDP galacturonate-polygalacturonate alpha-galacturonosyltransferase activity","type":"related"},{"name":"UDP-D-galacturonate:1,4-alpha-poly-D-galacturonate 4-alpha-D-galacturonosyltransferase activity","type":"related"},{"name":"uridine diphosphogalacturonate-polygalacturonate alpha-galacturonosyltransferase activity","type":"related"}],"termid":"GO:0047262"}


id: GO:0044010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of the same species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb","GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation","secondary_identifiers":["GO:0052000"],"synonyms":[{"name":"auto-aggregation","type":"broad"},{"name":"bfp-dependent aggregation","type":"narrow"},{"name":"bundle-forming fimbriae-dependent aggregation","type":"narrow"},{"name":"bundle-forming pili-dependent aggregation","type":"narrow"},{"name":"tfp-dependent aggregation","type":"narrow"},{"name":"type IV pili-dependent aggregation","type":"narrow"}],"termid":"GO:0044010"}


id: GO:0000429
data:
  {"annotated_genes":["SJAG_03473","SJAG_03911"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102420,71024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000429","terms_by_termid":{"GO:0000433":null}}


id: PR:O14129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad55 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.03c","synonyms":[{"name":"RAD55 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad55","type":"exact"}],"termid":"PR:O14129"}


id: GO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte to cross a high endothelial venule in response to an external stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15122201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte chemotaxis across high endothelial venule","termid":"GO:0002518"}


id: FYPO:0003860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of miconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to miconazole","synonyms":[{"name":"resistance to miconazole during mitotic cell cycle","type":"related"},{"name":"resistance to miconazole during vegetative growth","type":"exact"},{"name":"resistant to miconazole","type":"exact"}],"termid":"FYPO:0003860"}


id: PBO:0054628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2033","termid":"PBO:0054628"}


id: PBO:0063359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 4 like 1","termid":"PBO:0063359"}


id: PBO:0081903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 860","termid":"PBO:0081903"}


id: PBO:0005654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/UAS domain protein Ucp10 (predicted)","termid":"PBO:0005654"}


id: GO:0035659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of a target cell in the epidermis that contributes to the migration of an epidermal cell along or through a wound gap to reestablish a continuous epidermis.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in wound healing, spreading of epidermal cells (obsolete GO:0035659)","synonyms":[{"name":"Wnt receptor signaling pathway involved in wound healing, spreading of epidermal cells","type":"exact"},{"name":"Wnt receptor signalling pathway involved in wound healing, spreading of epidermal cells","type":"exact"},{"name":"Wnt-activated signaling pathway involved in wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:0035659"}


id: MOD:01329
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because duplicate and redundant with MOD:01061. Remap to MOD:01061","definition_xrefs":["DeltaMass:197"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01329 iodoacetic acid - site C (obsolete MOD:01329)","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:01329"}


id: PBO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome-lysosome associated apoptosis and autophagy regulator 1","termid":"PBO:0046151"}


id: GO:1900062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:17914901"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of replicative cell aging (obsolete GO:1900062)","synonyms":[{"name":"regulation of replicative cell ageing","type":"exact"}],"termid":"GO:1900062"}


id: PBO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 18","termid":"PBO:0072141"}


id: PBO:0084600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL200C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKL201C","termid":"PBO:0084600"}


id: PBO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR95","termid":"PBO:0017003"}


id: PBO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport_during_vegetative_growth","termid":"PBO:0035867"}


id: PBO:0081396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 235","termid":"PBO:0081396"}


id: GO:0071557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 27 of the histone.","definition_xrefs":["PMID:20023638","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 demethylation (obsolete GO:0071557)","synonyms":[{"name":"H3K27 demethylation","type":"related"}],"termid":"GO:0071557"}


id: PBO:0090890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17","termid":"PBO:0090890"}


id: PBO:0060582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 19","termid":"PBO:0060582"}


id: FYPO:0000479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"premature meiosis","synonyms":[{"name":"advanced meiosis","type":"exact"},{"name":"meiosis: premature","type":"related"},{"name":"premature meiotic nuclear division","type":"exact"}],"termid":"FYPO:0000479"}


id: PBO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc11","termid":"PBO:0000805"}


id: GO:0016642
data:
  {"annotated_genes":["SJAG_03861","SJAG_03290","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83662,84899,109214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004375"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a disulfide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016642","terms_by_termid":{"GO:0004375":null}}


id: PBO:0039504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 2","termid":"PBO:0039504"}


id: PBO:0054823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2236","termid":"PBO:0054823"}


id: GO:0010676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular carbohydrate metabolic process (obsolete GO:0010676)","termid":"GO:0010676"}


id: PR:O14110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aminomethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.14","secondary_identifiers":["UniProtKB:O14110"],"synonyms":[{"name":"GCVT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMT","type":"exact"},{"name":"glycine cleavage system T protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14110"}


id: PBO:0079393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 4B class IVb","termid":"PBO:0079393"}


id: GO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"pericyte cell differentiation","termid":"GO:1904238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell differentiation","termid":"GO:0072007"}


id: GO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002840"}


id: GO:0140623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a type I pilus.","definition_xrefs":["PMID:1679330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"type I pilus assembly","synonyms":[{"name":"T1P assembly","type":"broad"},{"name":"type 1 pilus biogenesis","type":"exact"},{"name":"type I fimbria assembly","type":"exact"},{"name":"type I fimbria biogenesis","type":"exact"},{"name":"type I fimbriae assembly","type":"exact"},{"name":"type I fimbriae biogenesis","type":"exact"},{"name":"type I fimbrial assembly","type":"exact"},{"name":"type I fimbrial biogenesis","type":"exact"},{"name":"type I fimbrium assembly","type":"exact"},{"name":"type I fimbrium biogenesis","type":"exact"}],"termid":"GO:0140623"}


id: PBO:0017641
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy supressor of RAs","termid":"PBO:0017641"}


id: PBO:0079688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiA prenyltransferase domain containing 1","termid":"PBO:0079688"}


id: PBO:0027007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ascospore_wall_thickness","termid":"PBO:0027007"}


id: PBO:0058753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6877","termid":"PBO:0058753"}


id: PBO:0077944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 4-1","termid":"PBO:0077944"}


id: GO:0036223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of adenine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to adenine starvation","synonyms":[{"name":"cellular response to adenine deprivation","type":"exact"}],"termid":"GO:0036223"}


id: PBO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ER retention signal","termid":"PBO:0000824"}


id: PBO:0072143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 20","termid":"PBO:0072143"}


id: PATO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being stretched out and lying at full length along the ground.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostrate","termid":"PATO:0000631"}


id: GO:0031163
data:
  {"annotated_genes":["SJAG_01615","SJAG_00894","SJAG_01238","SJAG_04397","SJAG_03701","SJAG_01063","SJAG_00066","SJAG_04014","SJAG_00186","SJAG_02497","SJAG_00455","SJAG_03862","SJAG_04016","SJAG_03222","SJAG_01417","SJAG_02495","SJAG_02457","SJAG_02866","SJAG_02994","SJAG_02895","SJAG_02306","SJAG_00972","SJAG_00532"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94440,106063,103053,110058,85132,105873,89135,95407,99282,89366,97776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[95102,105432,97777,88963,84452,110902,113985,106050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"},{"annotations":[110061],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0018283"},{"annotations":[89137,85485,100933,67724,96193,110926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016226"}]},"cv_name":"biological_process","definition":"The incorporation of a metal and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah","GOC:pde","GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"metallo-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"metal-sulfur cluster assembly","type":"exact"},{"name":"metallo-sulfur cluster biosynthesis","type":"related"},{"name":"metallo-sulphur cluster assembly","type":"exact"}],"termid":"GO:0031163","terms_by_termid":{"GO:0016226":null,"GO:0018283":null,"GO:0044571":null,"GO:0044572":null}}


id: GO:0072759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a topoisomerase inhibitor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to topoisomerase inhibitor","termid":"GO:0072758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to topoisomerase inhibitor","termid":"GO:0072759"}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: GO:0035602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:yaf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"negative regulation of apoptotic process in bone marrow cell","termid":"GO:0071866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"FGF receptor signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"exact"},{"name":"FGFR signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptosis in bone marrow","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in negative regulation of apoptotic process in bone marrow","type":"exact"}],"termid":"GO:0035602"}


id: PBO:0026807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_linear_element","termid":"PBO:0026807"}


id: GO:0038109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of stem cell factor to the tyrosine kinase receptor KIT on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription. Stem cell factor (KIT ligand) binding to the receptor Kit mediates receptor dimerization, activation of its intrinsic tyrosine kinase activity and autophosphorylation. The activated receptor then phosphorylates various substrates, thereby activating distinct signaling cascades within the cell that trigger a change in state or activity of the cell.","definition_xrefs":["GOC:nhn","GOC:signaling","PMID:16129412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to stem cell factor stimulus","termid":"GO:0036216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Kit signaling pathway","synonyms":[{"name":"Kit signalling pathway","type":"exact"},{"name":"SCF signaling pathway","type":"exact"},{"name":"stem cell factor receptor signaling pathway","type":"exact"},{"name":"stem cell factor signaling pathway","type":"exact"}],"termid":"GO:0038109"}


id: GO:0033664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host defense-related protein level (obsolete GO:0033664)","termid":"GO:0033664"}


id: GO:1901703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization that is involved in auxin polar transport.","definition_xrefs":["GOC:TermGenie","PMID:23163883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in auxin polar transport","synonyms":[{"name":"establishment and maintenance of protein localization involved in auxin polar transport","type":"exact"},{"name":"protein localisation involved in auxin polar transport","type":"exact"}],"termid":"GO:1901703"}


id: PBO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase (M phase inducer) Cdc25","termid":"PBO:0090643"}


id: PBO:0067859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 161","termid":"PBO:0067859"}


id: PBO:0077359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 98","termid":"PBO:0077359"}


id: PBO:0082048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-O-ribose methyltransferase; methylates the 2'-O-ribose of tRNA-Phe, tRNA-Trp, and tRNA-Leu at positions C32 and N34 of tRNA anticodon loop; crucial biological role likely modification of tRNA-Phe; interacts with Trm732p and Rtt10p in 2'-O-methylation of C32 and N34 substrate tRNAs, respectively; yeast null mutant can be functionally complemented by human FTSJ1, mutations in which have been implicated in nonsyndromic X-linked intellectual disability (NSXLID)","termid":"PBO:0082048"}


id: PBO:0067841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 143","termid":"PBO:0067841"}


id: PBO:0056080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member L","termid":"PBO:0056080"}


id: SO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes one or more structural features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_variant","termid":"SO:0001060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"Jannovar:structural_variant","type":"exact"},{"name":"VAT:svOverlap","type":"exact"},{"name":"structural variant","type":"related"}],"termid":"SO:0001537"}


id: GO:0031035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"myosin filament disassembly","synonyms":[{"name":"myosin depolymerization","type":"related"}],"termid":"GO:0031035"}


id: PBO:0059589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 1","termid":"PBO:0059589"}


id: GO:0050437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (-)-endo-fenchol + diphosphate.","definition_xrefs":["RHEA:20565","EC:4.2.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(-)-endo-fenchol synthase activity","secondary_identifiers":["MetaCyc:4.2.3.10-RXN","KEGG_REACTION:R02004"],"synonyms":[{"name":"(-)-endo-fenchol cyclase activity","type":"related"},{"name":"geranyl pyrophosphate:(-)-endo-fenchol cyclase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-endo-fenchol-forming]","type":"related"}],"termid":"GO:0050437"}


id: PBO:0087472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a two-component pyridoxal-5'-phosphate synthase; involved in pyridoxine (vitamin B6) biosynthesis from glyceraldehyde-3-phosphate, ribose-5-phosphate and ammonia liberated from glutamine by glutaminase; forms a complex with Sno1p that functions as an active glutaminase; member of a stationary phase-induced gene family where transcriptional induction occurs during the postdiauxic phase; co-regulated with SNO1; paralog of SNZ2 and SNZ3","termid":"PBO:0087472"}


id: PBO:0055238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2665","termid":"PBO:0055238"}


id: PBO:0078801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 19-1","termid":"PBO:0078801"}


id: PBO:0004176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heatshock protein Hsp78 (predicted)","termid":"PBO:0004176"}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PMID:11432827","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: FYPO:0006798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the nuclear MIS12/MIND complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah","PMID:29180432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear MIS12/MIND complex binding","synonyms":[{"name":"normal nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"normal nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"}],"termid":"FYPO:0006798"}


id: PBO:0071914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 53","termid":"PBO:0071914"}


id: PBO:0055948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 57","termid":"PBO:0055948"}


id: PBO:0045005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage induced long noncoding RNA","termid":"PBO:0045005"}


id: GO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration","secondary_identifiers":["GO:0043359"],"synonyms":[{"name":"glia cell migration","type":"exact"}],"termid":"GO:0008347"}


id: GO:0102351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-aminobutyric acid + 2-oxo monocarboxylic acid anion = 4-oxobutanoate + glycine.","definition_xrefs":["GOC:pz","EC:2.6.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"gamma-aminobutyrate transaminase (glyoxylate dependent) activity","secondary_identifiers":["MetaCyc:RXN-13328","RHEA:32267"],"termid":"GO:0102351"}


id: PBO:0029397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_nucleoplasm","termid":"PBO:0029397"}


id: FYPO:0007380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005568","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000004","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated T-shaped vegetative cell","synonyms":[{"name":"elongated T-shaped cell during vegetative growth","type":"exact"},{"name":"elongated T-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"long T-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007380"}


id: GO:0140339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to phosphatidylglycerol and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylglycerol transfer activity","synonyms":[{"name":"phosphatidylglycerol carrier activity","type":"exact"}],"termid":"GO:0140339"}


id: PBO:0072473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 2","termid":"PBO:0072473"}


id: PBO:0070462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 5","termid":"PBO:0070462"}


id: GO:0061232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric glomerular epithelium over time, from its formation to the mature structure. The mesonephric glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus in the mesonephros. The mesonephric glomerular epithelium consists of both parietal and visceral epithelium. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"part_of","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}


id: PBO:0070498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 33","termid":"PBO:0070498"}


id: FYPO:0001644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lithium ions measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular lithium level","synonyms":[{"name":"decreased cellular lithium ion level","type":"exact"},{"name":"decreased cellular lithium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lithium level during vegetative growth","type":"exact"},{"name":"decreased lithium accumulation","type":"related"},{"name":"reduced cellular lithium level","type":"exact"}],"termid":"FYPO:0001644"}


id: PBO:0031014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_actinomycin_D","termid":"PBO:0031014"}


id: FYPO:0004135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of copper ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to copper","synonyms":[{"name":"resistance to copper during mitotic cell cycle","type":"related"},{"name":"resistance to copper during vegetative growth","type":"exact"},{"name":"resistance to copper ion","type":"exact"},{"name":"resistance to copper ions","type":"exact"},{"name":"resistant to copper","type":"exact"}],"termid":"FYPO:0004135"}


id: GO:1904386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:12112407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-phenylalanine derivative","termid":"GO:1904386"}


id: GO:0035604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which activates or increases the frequency, rate or extent of cell proliferation in the bone marrow.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"positive regulation of cell proliferation in bone marrow","termid":"GO:0071864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow","synonyms":[{"name":"FGF receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow","type":"exact"},{"name":"FGFR signaling pathway involved in positive regulation of cell proliferation in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in positive regulation of cell proliferation in bone marrow","type":"exact"}],"termid":"GO:0035604"}


id: PBO:0080251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 14 pseudogene","termid":"PBO:0080251"}


id: GO:0060525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a glandular acinus of the prostate gland over time, from its initial formation to the mature structure. The glandular acini are the saclike structures of the gland.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate glandular acinus development","termid":"GO:0060525"}


id: GO:0019919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine.","definition_xrefs":["RESID:AA0069","RESID:AA0068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine omega-N-methylation","termid":"GO:0035247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine methylation, to asymmetrical-dimethyl arginine","synonyms":[{"name":"peptidyl-arginine methylation, to unsymmetrical-dimethyl arginine","type":"exact"}],"termid":"GO:0019919"}


id: PBO:0082555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centrin (Cdc31p)-binding protein required for SPB duplication; localizes to the half-bridge of the spindle pole body (SPB); required for progression through G(2)-M transition; phosphorylated by Cdc28p-Clb2p and by Cdc5p; dephosphorylated by Cdc14p; has similarity to Xenopus laevis XCAP-C","termid":"PBO:0082555"}


id: PBO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human hmmtag2 homolog","termid":"PBO:0001949"}


id: SO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of a T-cell receptor chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_C_Gene","synonyms":[{"name":"T_cell_receptor_C_gene","type":"exact"}],"termid":"SO:0002134"}


id: GO:0010533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["PMID:9135582","GOC:tb","PMID:17190829","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"regulates","term_name":"activation of Janus kinase activity","termid":"GO:0042976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activation of Janus kinase activity","secondary_identifiers":["GO:0010534","GO:0010532"],"synonyms":[{"name":"regulation of activation of JAK protein","type":"exact"},{"name":"regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"regulation of activation of JAK1 protein","type":"narrow"},{"name":"regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"regulation of activation of JAK2 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010533"}


id: GO:0006129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-disulfide reduction (obsolete GO:0006129)","synonyms":[{"name":"protein-disulfide reduction","type":"exact"},{"name":"protein-disulphide reduction","type":"exact"}],"termid":"GO:0006129"}


id: GO:0021633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the optic nerve. This process pertains to the physical shaping of a rudimentary structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve structural organization","synonyms":[{"name":"CN II structural organization","type":"related"},{"name":"optic nerve structural organisation","type":"exact"}],"termid":"GO:0021633"}


id: GO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the rostrodorsal region of the cerebellar plate to their final more ventral position.","definition_xrefs":["GOC:dph","PMID:15157725","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"deep nuclear neuron cell migration","termid":"GO:0021946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inward migration of deep nuclear neurons","termid":"GO:0021948"}


id: GO:1902892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of root hair elongation.","definition_xrefs":["PMID:22329353","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of root hair elongation","termid":"GO:1902890"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"positively_regulates","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of root hair elongation","synonyms":[{"name":"activation of root hair elongation","type":"narrow"},{"name":"up regulation of root hair elongation","type":"exact"},{"name":"up-regulation of root hair elongation","type":"exact"},{"name":"upregulation of root hair elongation","type":"exact"}],"termid":"GO:1902892"}


id: PR:Q9P6P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.05c","secondary_identifiers":["UniProtKB:Q9P6P1"],"synonyms":[{"name":"Spom972h-STX16","type":"exact"},{"name":"syntaxin tlg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P1"}


id: GO:0043055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of a nematode during the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["WB_REF:wm2003ab740","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of dauer","synonyms":[{"name":"maintenance of dormancy in the nematode","type":"exact"}],"termid":"GO:0043055"}


id: GO:0035092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progressive compaction of the spermatid chromatin so that it reaches a level of condensation that is not compatible with nuclear activities such as transcription or DNA replication.","definition_xrefs":["GOC:bf","PMID:11735001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"sperm DNA condensation","secondary_identifiers":["GO:0035093"],"synonyms":[{"name":"sperm chromatin condensation","type":"exact"},{"name":"spermatogenesis, exchange of chromosomal proteins","type":"related"}],"termid":"GO:0035092"}


id: GO:1904335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16303610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ductus arteriosus closure","termid":"GO:1904335"}


id: GO:0046123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine deoxyribonucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside biosynthetic process","termid":"GO:0042451"},{"relation_name":"is_a","term_name":"deoxyribonucleoside biosynthetic process","termid":"GO:0046120"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside anabolism","type":"exact"},{"name":"purine deoxyribonucleoside biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside formation","type":"exact"},{"name":"purine deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046123"}


id: PR:G2TRL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.18","synonyms":[{"name":"Spom972h-new2","type":"exact"}],"termid":"PR:G2TRL5"}


id: GO:0098724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Symmetric division of a stem cell to produce two stem cells of the same type as the parent. Symmetric stem cell division is necessary for amplification of stem cell populations in the absence of sources of stem cells external to an existing population.","definition_xrefs":["PMID:19948499","PMID:23303905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"is_a","term_name":"symmetric cell division","termid":"GO:0098725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric stem cell division","termid":"GO:0098724"}


id: PBO:0054088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1441","termid":"PBO:0054088"}


id: PBO:0110363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 3 (MAM blood group)","termid":"PBO:0110363"}


id: GO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}


id: PBO:0072636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 2","termid":"PBO:0072636"}


id: PBO:0051291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-12","termid":"PBO:0051291"}


id: PATO:0001242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the distance between repeating units of a wave pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wavelength","termid":"PATO:0001242"}


id: GO:0051081
data:
  {"annotated_genes":["SJAG_04578","SJAG_00680","SJAG_00840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[99842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[90023,99845],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the nuclear membranes, for example during cellular division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"},{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear envelope breakdown","type":"related"},{"name":"nuclear envelope catabolism","type":"related"},{"name":"nuclear envelope degradation","type":"related"},{"name":"nuclear envelope disassembly","type":"related"}],"termid":"GO:0051081","terms_by_termid":{"GO:0007077":null,"GO:0140516":null,"GO:1905557":null}}


id: PBO:0048590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 4 pseudogene","termid":"PBO:0048590"}


id: PBO:0084234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hypothetical protein; deletion of locus affects telomere length","termid":"PBO:0084234"}


id: PBO:0045700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type family member 5","termid":"PBO:0045700"}


id: PBO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8 (predicted)","termid":"PBO:0011126"}


id: SO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyluridine","secondary_identifiers":["RNAMOD:068"],"synonyms":[{"name":"5-methoxycarbonylmethyluridine","type":"exact"},{"name":"five methoxycarbonylmethyluridine","type":"exact"},{"name":"mcm5U","type":"exact"}],"termid":"SO:0001360"}


id: PBO:0076457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 3","termid":"PBO:0076457"}


id: PBO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MCM10","termid":"PBO:0018081"}


id: GO:0042724
data:
  {"annotated_genes":["SJAG_03538","SJAG_01970","SJAG_04282","SJAG_00827","SJAG_00381","SJAG_02420","SJAG_04067","SJAG_02406","SJAG_04866","SJAG_03362","SJAG_02421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85251,109867],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[109780,95686,109774,110185,90469,112183,103555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[112184,95687,90470,109781,110186,109775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[106635,95689,106636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), and related compounds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"thiamine-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin and derivative biosynthesis","type":"exact"},{"name":"thiamin and derivative biosynthetic process","type":"exact"},{"name":"thiamin-containing compound biosynthetic process","type":"exact"},{"name":"thiamine and derivative biosynthesis","type":"exact"},{"name":"thiamine and derivative biosynthetic process","type":"exact"},{"name":"thiamine-containing compound anabolism","type":"exact"},{"name":"thiamine-containing compound biosynthesis","type":"exact"},{"name":"thiamine-containing compound formation","type":"exact"},{"name":"thiamine-containing compound synthesis","type":"exact"},{"name":"vitamin B1 and derivative biosynthesis","type":"exact"},{"name":"vitamin B1 and derivative biosynthetic process","type":"exact"}],"termid":"GO:0042724","terms_by_termid":{"GO:0009228":null,"GO:0009229":null,"GO:0036172":null,"GO:0090180":null}}


id: PBO:0059906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 29","termid":"PBO:0059906"}


id: GO:0052319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phytoalexin metabolic process","termid":"GO:0052318"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of phytoalexin biosynthetic process","synonyms":[{"name":"regulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052319"}


id: PBO:0074016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 10","termid":"PBO:0074016"}


id: GO:0141129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts a host cell surface receptor-mediated signal transduction pathway by binding to and inhibiting the receptor of the pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:10221874","PMID:22714643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host signal transduction pathway via antagonism of host cell surface receptor","synonyms":[{"name":"symbiont-mediated perturbation of host signal transduction pathway via antagonism of host cell surface receptor","type":"broad"}],"termid":"GO:0141129"}


id: PBO:0090622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate-dependent xanthine dioxygenase Xan1","termid":"PBO:0090622"}


id: PBO:0004794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sec13","termid":"PBO:0004794"}


id: PBO:0054890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2304","termid":"PBO:0054890"}


id: MOD:01835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfone","termid":"MOD:00256"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfone","termid":"MOD:01835"}


id: PBO:0043630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 2","termid":"PBO:0043630"}


id: PBO:0059365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B","termid":"PBO:0059365"}


id: PR:Q9UTB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PHD finger-like domain-containing protein 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01040","PANTHER:PTHR13120:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ini1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.02c","secondary_identifiers":["UniProtKB:Q9UTB8"],"synonyms":[{"name":"Spom972h-PHF5A","type":"exact"}],"termid":"PR:Q9UTB8"}


id: GO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neuromast over time, from its formation to the mature structure. The neuromast is the sensory organ of the lateral line and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromasts are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast development","termid":"GO:0048884"}


id: GO:0050002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lipoate + 5-aminopentanoate = dihydrolipoate + D-proline.","definition_xrefs":["EC:1.21.4.1","MetaCyc:D-PROLINE-REDUCTASE-(DITHIOL)-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","termid":"GO:0050485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-proline reductase (dithiol) activity","secondary_identifiers":["RHEA:12737","MetaCyc:1.21.4.1-RXN"],"synonyms":[{"name":"5-aminopentanoate:lipoate oxidoreductase (cyclizing)","type":"related"}],"termid":"GO:0050002"}


id: PBO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 1","termid":"PBO:0061309"}


id: GO:0031519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.","definition_xrefs":["PMID:9372908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"PcG protein complex","synonyms":[{"name":"Polycomb Group protein complex","type":"exact"}],"termid":"GO:0031519"}


id: PBO:0087740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential","termid":"PBO:0087740"}


id: GO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular organohalogen metabolic process","termid":"GO:0090345"}


id: MOD:00322
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to tele-methyl-L-histidine.","definition_xrefs":["PubMed:8645219","RESID:AA0317","PubMed:10601317","PubMed:11474090","PubMed:11875433","PubMed:6692818","PubMed:8076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated L-histidine","termid":"MOD:00724"},{"relation_name":"is_a","term_name":"monomethylated L-histidine","termid":"MOD:02038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"1'-methyl-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(1-methyl-1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-methyl-L-histidine","type":"exact"},{"name":"3-methylhistidine","type":"related"},{"name":"4-methyl-histidine","type":"related"},{"name":"MOD_RES Tele-methylhistidine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(epsilon)-methylhistidine","type":"exact"},{"name":"N(tau)-methylhistidine","type":"exact"},{"name":"NteleMeHis","type":"exact"},{"name":"tele-methylated L-histidine","type":"exact"},{"name":"tele-methylhistidine","type":"exact"}],"termid":"MOD:00322"}


id: GO:1904146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["GOC:TermGenie","PMID:22674394","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903538"},{"relation_name":"positively_regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"activation of meiotic cell cycle process involved in oocyte maturation","type":"narrow"},{"name":"up regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"up-regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"upregulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"}],"termid":"GO:1904146"}


id: PBO:0043580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XII alpha 1 chain","termid":"PBO:0043580"}


id: GO:0051637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a Gram-positive bacterium.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive bacterial cell surface binding (obsolete GO:0051637)","synonyms":[{"name":"Gram-positive bacterial binding","type":"exact"},{"name":"Gram-positive bacterial cell surface binding","type":"exact"},{"name":"Gram-positive bacterium binding","type":"exact"},{"name":"Gram-positive bacterium cell surface binding","type":"exact"},{"name":"binding to Gram-positive bacterium","type":"exact"}],"termid":"GO:0051637"}


id: GO:0031768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ghrelin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ghrelin receptor binding","synonyms":[{"name":"ghrelin receptor ligand","type":"narrow"},{"name":"type 1 growth hormone secretagogue GH-releasing peptide receptor binding","type":"exact"}],"termid":"GO:0031768"}


id: GO:0060273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior in which an organism sheds tears, often accompanied by non-verbal vocalizations and in response to external or internal stimuli.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crying behavior","termid":"GO:0060273"}


id: MOD:01273
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-serine residue.","definition_xrefs":["PubMed:8597590","PubMed:15283597","Unimod:276#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-[4-(2-aminoethyl)benzenesulfonyl] serine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01273"}


id: PBO:0079357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3c","termid":"PBO:0079357"}


id: PBO:0077345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86B","termid":"PBO:0077345"}


id: PBO:0056783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 1","termid":"PBO:0056783"}


id: PBO:0087203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine uroporphyrinogen III transmethylase; involved in the biosynthesis of siroheme, a prosthetic group used by sulfite reductase; required for sulfate assimilation and methionine biosynthesis","termid":"PBO:0087203"}


id: PBO:0082089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' DNA helicase; involved in nucleotide excision repair and transcription; subunit of RNA polII initiation factor TFIIH and of Nucleotide Excision Repair Factor 3 (NEF3); homolog of human XPD protein; mutant has aneuploidy tolerance; protein abundance increases in response to DNA replication stress","termid":"PBO:0082089"}


id: PBO:0053000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 4","termid":"PBO:0053000"}


id: PBO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo/keto reductase, unknown biological role","termid":"PBO:0000109"}


id: GO:0080107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-methylthiopropyl-glucosinolate = 8-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"8-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080107"}


id: PBO:0110405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYGO2 and SHC1 antisense RNA 1","termid":"PBO:0110405"}


id: GO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory lysosome that is present in cells with cytolytic capability such as cytotoxic T lymphocytes and natural killer cells. Cytolytic granules mediate the storage and regulated excretion of lytic molecules for killing of target cells.","definition_xrefs":["PMID:12766758","GOC:jl","PMID:11052265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"cytolytic granule","termid":"GO:0044194"}


id: GO:0050368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine = 3-amino-3-(4-hydroxyphenyl)propanoate.","definition_xrefs":["EC:5.4.3.6","RHEA:15781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"tyrosine 2,3-aminomutase activity","secondary_identifiers":["KEGG_REACTION:R00739","MetaCyc:TYROSINE-23-AMINOMUTASE-RXN"],"synonyms":[{"name":"L-tyrosine 2,3-aminomutase activity","type":"related"},{"name":"tyrosine alpha,beta-mutase activity","type":"related"}],"termid":"GO:0050368"}


id: PBO:0073395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain bifurcated histone lysine methyltransferase 1","termid":"PBO:0073395"}


id: GO:1905074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rl","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of tight junction disassembly","termid":"GO:1905073"},{"relation_name":"negatively_regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tight junction disassembly","synonyms":[{"name":"down regulation of occluding cell junction disassembly","type":"exact"},{"name":"down regulation of tight junction disassembly","type":"exact"},{"name":"down-regulation of occluding cell junction disassembly","type":"exact"},{"name":"down-regulation of tight junction disassembly","type":"exact"},{"name":"downregulation of occluding cell junction disassembly","type":"exact"},{"name":"downregulation of occluding junction disassembly","type":"exact"},{"name":"downregulation of tight junction disassembly","type":"exact"},{"name":"inhibition of occluding cell junction disassembly","type":"narrow"},{"name":"inhibition of occluding junction disassembly","type":"narrow"},{"name":"inhibition of tight junction disassembly","type":"narrow"},{"name":"negative regulation of occluding cell junction disassembly","type":"exact"}],"termid":"GO:1905074"}


id: PBO:0030801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030801"}


id: GO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to chymotrypsin C.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin G activity (obsolete GO:0004261)","synonyms":[{"name":"cathepsin G activity","type":"exact"},{"name":"chymotrypsin-like proteinase activity","type":"related"},{"name":"neutral proteinase activity","type":"related"}],"termid":"GO:0004261"}


id: PBO:0043717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 5","termid":"PBO:0043717"}


id: PBO:0077591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 2","termid":"PBO:0077591"}


id: PBO:0050844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of Bruton tyrosine kinase pseudogene 1","termid":"PBO:0050844"}


id: FYPO:0001023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cisplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on cisplatin","synonyms":[{"name":"normal cell population growth in presence of cisplatin","type":"exact"},{"name":"normal cell population growth on cisplatin","type":"exact"},{"name":"normal cellular response to cisplatin","type":"related"},{"name":"normal growth on cis-DDP","type":"exact"},{"name":"normal vegetative cell population growth on cisplatin","type":"exact"}],"termid":"FYPO:0001023"}


id: GO:0033492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"esculetin metabolic process","synonyms":[{"name":"esculetin metabolism","type":"exact"}],"termid":"GO:0033492"}


id: GO:0006879
data:
  {"annotated_genes":["SJAG_04607","SJAG_02457","SJAG_00802","SJAG_04675","SJAG_00532","SJAG_03862","SJAG_00822","SJAG_04743","SJAG_01004","SJAG_04867","SJAG_02735","SJAG_04031","SJAG_01694","SJAG_02474","SJAG_04677","SJAG_02834","SJAG_00792","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74060,85484,88487,89136,90248,92457,96646,100429,103591,110060],"is_not":false,"summary":null,"term":"GO:0006879"},{"annotations":[99964,90291,90283,88636],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[99973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[99966,88637,88633,108976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[61578,106969,61331,106968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of iron ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00532":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_01004":null,"SJAG_01694":null,"SJAG_02457":null,"SJAG_02474":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_03862":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04607":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular iron ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular iron ion homeostasis","type":"exact"},{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0006879","terms_by_termid":{"GO:0006879":null,"GO:0006880":null,"GO:0010106":null,"GO:0033214":null,"GO:0033215":null}}


id: GO:1902607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:23407708","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"regulation of large conductance calcium-activated potassium channel activity","termid":"GO:1902606"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of large conductance calcium-activated potassium channel activity","synonyms":[{"name":"down regulation of BK KCa channels","type":"exact"},{"name":"down regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"down regulation of BK channel activity","type":"related"},{"name":"down regulation of large conductance KCa channels","type":"exact"},{"name":"down regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"down-regulation of BK KCa channels","type":"exact"},{"name":"down-regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"down-regulation of BK channel activity","type":"related"},{"name":"down-regulation of large conductance KCa channels","type":"exact"},{"name":"down-regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"downregulation of BK KCa channels","type":"exact"},{"name":"downregulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"downregulation of BK channel activity","type":"related"},{"name":"downregulation of large conductance KCa channels","type":"exact"},{"name":"downregulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"inhibition of BK KCa channels","type":"narrow"},{"name":"inhibition of BK calcium-activated potassium channel activity","type":"narrow"},{"name":"inhibition of BK channel activity","type":"related"},{"name":"inhibition of large conductance KCa channels","type":"narrow"},{"name":"inhibition of large conductance calcium-activated potassium channel activity","type":"narrow"},{"name":"negative regulation of BK KCa channels","type":"exact"},{"name":"negative regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"negative regulation of BK channel activity","type":"related"},{"name":"negative regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902607"}


id: GO:1905019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:1665486","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of methionine-tRNA ligase activity (obsolete GO:1905019)","synonyms":[{"name":"down regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"down regulation of MetRS activity","type":"exact"},{"name":"down regulation of methionine translase activity","type":"exact"},{"name":"down regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"down regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"down-regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of MetRS activity","type":"exact"},{"name":"down-regulation of methionine translase activity","type":"exact"},{"name":"down-regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"downregulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"downregulation of MetRS activity","type":"exact"},{"name":"downregulation of methionine translase activity","type":"exact"},{"name":"downregulation of methionine-tRNA ligase activity","type":"exact"},{"name":"downregulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"inhibition of L-methionine:tRNAMet ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of MetRS activity","type":"narrow"},{"name":"inhibition of methionine translase activity","type":"narrow"},{"name":"inhibition of methionine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of methionyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of methionyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of methionyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of methionyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"negative regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of MetRS activity","type":"exact"},{"name":"negative regulation of methionine translase activity","type":"exact"},{"name":"negative regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905019"}


id: PBO:0056602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDM4 regulator of p53","termid":"PBO:0056602"}


id: PBO:0075969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 9","termid":"PBO:0075969"}


id: GO:1903243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle hypertrophy in response to stress.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000058","PMID:19287093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle hypertrophy","termid":"GO:0010614"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle adaptation","termid":"GO:0010616"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle hypertrophy in response to stress","termid":"GO:1903242"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle hypertrophy in response to stress","synonyms":[{"name":"down regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"down-regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"downregulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"inhibition of cardiac muscle hypertrophy in response to stress","type":"narrow"}],"termid":"GO:1903243"}


id: PBO:0076440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF12 divergent transcript","termid":"PBO:0076440"}


id: PBO:0029633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_cell_growth","termid":"PBO:0029633"}


id: PBO:0051453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-48 (non-functional)","termid":"PBO:0051453"}


id: GO:0016243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the autophagosome.","definition_xrefs":["GOC:autophagy","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of autophagosome size","synonyms":[{"name":"regulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0016243"}


id: PBO:0082628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of CORVET membrane tethering complex; cytoplasmic protein required for the sorting and processing of soluble vacuolar proteins, acidification of the vacuolar lumen, and assembly of the vacuolar H+-ATPase","termid":"PBO:0082628"}


id: GO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}


id: PBO:0078922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-1","termid":"PBO:0078922"}


id: GO:1902982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA strand elongation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA strand elongation involved in premeiotic DNA replication","synonyms":[{"name":"DNA strand elongation involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902982"}


id: PBO:0081966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZPR1 pseudogene 1","termid":"PBO:0081966"}


id: GO:0034036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine ribonucleoside bisphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034030"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate biosynthetic process","termid":"GO:0034033"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside bisphosphate biosynthetic process","synonyms":[{"name":"purine ribonucleoside bisphosphate anabolism","type":"exact"},{"name":"purine ribonucleoside bisphosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside bisphosphate formation","type":"exact"},{"name":"purine ribonucleoside bisphosphate synthesis","type":"exact"}],"termid":"GO:0034036"}


id: PBO:0081294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75C, pseudogene","termid":"PBO:0081294"}


id: GO:0071566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier UFM1, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:sp","PMID:20018847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"UFM1 activating enzyme activity","termid":"GO:0071566"}


id: PBO:0051287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-35 (pseudogene)","termid":"PBO:0051287"}


id: PBO:0061635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16","termid":"PBO:0061635"}


id: GO:1902174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:TermGenie","PMID:18938133","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte apoptotic process","termid":"GO:1902172"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"positively_regulates","term_name":"keratinocyte apoptotic process","termid":"GO:0097283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte apoptotic process","synonyms":[{"name":"activation of keratinocyte apoptosis","type":"narrow"},{"name":"activation of keratinocyte apoptotic process","type":"narrow"},{"name":"positive regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up regulation of keratinocyte apoptotic process","type":"exact"},{"name":"up-regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up-regulation of keratinocyte apoptotic process","type":"exact"},{"name":"upregulation of keratinocyte apoptosis","type":"narrow"},{"name":"upregulation of keratinocyte apoptotic process","type":"exact"}],"termid":"GO:1902174"}


id: GO:0042487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","PMID:15355794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of odontogenesis","termid":"GO:0042481"},{"relation_name":"regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"regulation of odontogenesis of dentine-containing tooth","type":"exact"}],"termid":"GO:0042487"}


id: PBO:0091530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M Twenty-Six binding protein","termid":"PBO:0091530"}


id: GO:1902369
data:
  {"annotated_genes":["SJAG_00797","SJAG_01331","SJAG_03696","SJAG_04825","SJAG_03283","SJAG_03448","SJAG_04586","SJAG_02573","SJAG_03883","SJAG_04946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102473],"is_not":false,"summary":null,"term":"GO:1902369"},{"annotations":[86402,114431,77586,96253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[92426,85692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[85296,85693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[86841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process.","definition_xrefs":["GOC:bf","PMID:16640457","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"negatively_regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01331":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA breakdown","type":"exact"},{"name":"down regulation of RNA catabolic process","type":"exact"},{"name":"down regulation of RNA catabolism","type":"exact"},{"name":"down regulation of RNA degradation","type":"exact"},{"name":"down-regulation of RNA breakdown","type":"exact"},{"name":"down-regulation of RNA catabolic process","type":"exact"},{"name":"down-regulation of RNA catabolism","type":"exact"},{"name":"down-regulation of RNA degradation","type":"exact"},{"name":"downregulation of RNA breakdown","type":"exact"},{"name":"downregulation of RNA catabolic process","type":"exact"},{"name":"downregulation of RNA catabolism","type":"exact"},{"name":"downregulation of RNA degradation","type":"exact"},{"name":"inhibition of RNA breakdown","type":"narrow"},{"name":"inhibition of RNA catabolic process","type":"narrow"},{"name":"inhibition of RNA catabolism","type":"narrow"},{"name":"inhibition of RNA degradation","type":"narrow"},{"name":"negative regulation of RNA breakdown","type":"exact"},{"name":"negative regulation of RNA catabolism","type":"exact"},{"name":"negative regulation of RNA degradation","type":"exact"}],"termid":"GO:1902369","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null}}


id: GO:0160134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor activity characterized by the capacity to selectively recognize and interact with RNA molecules in a sequence-specific manner. Entities possessing this activity typically exhibit discerning binding preferences for specific nucleotide sequences within RNA molecules, enabling the identification and engagement of distinct RNA motifs or structural elements. This function is integral to various biological processes, including RNA processing, transport, and regulatory mechanisms, contributing to the specificity and precision of cellular RNA-related activities.","definition_xrefs":["PMID:17036044","PMID:14749727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"protein-RNA sequence-specific adaptor activity","termid":"GO:0160134"}


id: FYPO:0001474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the mitotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body morphology","synonyms":[{"name":"abnormal mitotic SPB morphology","type":"exact"},{"name":"abnormal mitotic spindle pole body structure","type":"narrow"},{"name":"abnormal spindle pole body morphology during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0001474"}


id: PBO:0078409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 3-1","termid":"PBO:0078409"}


id: PBO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase gamma subunit Ost3 (predicted)","termid":"PBO:0000886"}


id: PBO:0028775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitinyl_hydrolase_activity","termid":"PBO:0028775"}


id: FYPO:0006181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased, and some of the protein is present in the nucleus instead, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus","termid":"FYPO:0006100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","synonyms":[{"name":"decreased protein localisation to cytoplasm, with protein mislocalised to nucleus, during mitotic interphase","type":"exact"},{"name":"decreased protein localization in cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","type":"exact"}],"termid":"FYPO:0006181"}


id: GO:0044350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment by invagination of the plasma membrane to form uncoated micropinosomes, differentiated from macropinosomes by their smaller size, on average 95 nm.","definition_xrefs":["PMID:14732047","PMID:14731589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"micropinocytosis","secondary_identifiers":["GO:1902540"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"single-organism micropinocytosis","type":"related"}],"termid":"GO:0044350"}


id: RO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity and a condition (a phenotype or disease) of a host, in which the material entity is part of the host itself, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_autoimmune_trigger_for","termid":"RO:0001021"}


id: FYPO:0004046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004046"}


id: PBO:0084778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane receptor for cytosolic ribosomes; integral protein of the outer membrane that interacts with the nascent chain-associated complex (NAC) bound to ribosomes, contributing to co-translational mitochondrial import; interacts with porin (Por1p) and Om45p; abundance is decreased in cells grown in glucose relative to other carbon sources","termid":"PBO:0084778"}


id: PBO:0067193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 255, pseudogene","termid":"PBO:0067193"}


id: GO:0098702
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108726],"is_not":false,"summary":null,"term":"GO:0098702"}]},"cv_name":"biological_process","definition":"The directed movement of adenine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine transport","termid":"GO:0015853"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transport","termid":"GO:1904823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"adenine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061488"],"synonyms":[{"name":"adenine import into cell","type":"exact"}],"termid":"GO:0098702","terms_by_termid":{"GO:0098702":null}}


id: GO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"'de novo' NAD biosynthetic process","termid":"GO:0034627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process from aspartate","secondary_identifiers":["GO:0019355"],"synonyms":[{"name":"de novo NAD biosynthetic process from aspartate","type":"related"},{"name":"nicotinamide nucleotide anabolism from aspartate","type":"exact"},{"name":"nicotinamide nucleotide biosynthetic process from aspartate","type":"exact"},{"name":"nicotinamide nucleotide formation from aspartate","type":"exact"},{"name":"nicotinamide nucleotide synthesis from aspartate","type":"exact"}],"termid":"GO:0034628"}


id: PBO:0075536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E16","termid":"PBO:0075536"}


id: GO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytokine production","secondary_identifiers":["GO:0042032","GO:0050663","GO:0042107","GO:0042089"],"synonyms":[{"name":"cytokine biosynthetic process","type":"narrow"},{"name":"cytokine metabolic process","type":"narrow"},{"name":"cytokine secretion","type":"narrow"},{"name":"interferon production","type":"narrow"},{"name":"interferon secretion","type":"narrow"},{"name":"interleukin production","type":"narrow"},{"name":"interleukin secretion","type":"narrow"}],"termid":"GO:0001816"}


id: PBO:0056997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34c","termid":"PBO:0056997"}


id: GO:1901973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to proline.","definition_xrefs":["GOC:TermGenie","GOC:pm","PMID:7730362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proline binding","termid":"GO:1901973"}


id: PBO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP-type peptidyl-prolyl cis-trans isomerase (predicted)","termid":"PBO:0002471"}


id: GO:0047206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine + L-alanyl-tRNA(Ala) = UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-N6-(L-alanyl)-L-lysyl-D-alanyl-D-alanine + tRNA(Ala).","definition_xrefs":["EC:2.3.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylpentapeptide-lysine N6-alanyltransferase activity","secondary_identifiers":["RHEA:12432","MetaCyc:2.3.2.10-RXN"],"synonyms":[{"name":"UDP-N-acetylmuramoylpentapeptide lysine N(6)-alanyltransferase activity","type":"exact"},{"name":"UDP-N-acetylmuramoylpentapeptide lysine N6-alanyltransferase activity","type":"exact"},{"name":"alanyl-transfer ribonucleate-uridine diphosphoacetylmuramoylpentapeptide transferase activity","type":"exact"},{"name":"uridine diphosphoacetylmuramoylpentapeptide lysine N(6)-alanyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylmuramoylpentapeptide lysine N6-alanyltransferase activity","type":"exact"}],"termid":"GO:0047206"}


id: GO:0098521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential that inhibits muscle contraction.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory neuromuscular junction","termid":"GO:0098521"}


id: PBO:0064521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit B","termid":"PBO:0064521"}


id: FYPO:0007845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of RNA catabolic process during vegetative growth","synonyms":[{"name":"decreased rate of RNA breakdown during vegetative growth","type":"exact"},{"name":"decreased rate of RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased rate of RNA catabolism during vegetative growth","type":"exact"},{"name":"decreased rate of RNA degradation during vegetative growth","type":"exact"},{"name":"reduced rate of RNA catabolic process during vegetative growth","type":"exact"}],"termid":"FYPO:0007845"}


id: GO:0018723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phenanthrol + X-SO3(-) = HX + 3-phenanthrylsulfate.","definition_xrefs":["UM-BBD_reactionID:r0561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrol sulfotransferase activity","termid":"GO:0019111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3-phenanthrol sulfotransferase activity","synonyms":[{"name":"3-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018723"}


id: PR:O94380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI transamidase component PIG-T that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03902","PANTHER:PTHR12959:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component PIG-T homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.15","secondary_identifiers":["UniProtKB:O94380"],"synonyms":[{"name":"Spom972h-PIGT","type":"exact"}],"termid":"PR:O94380"}


id: GO:0032248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleoside transport","termid":"GO:0032244"},{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleoside transport","synonyms":[{"name":"activation of purine nucleoside transport","type":"narrow"},{"name":"stimulation of purine nucleoside transport","type":"narrow"},{"name":"up regulation of purine nucleoside transport","type":"exact"},{"name":"up-regulation of purine nucleoside transport","type":"exact"},{"name":"upregulation of purine nucleoside transport","type":"exact"}],"termid":"GO:0032248"}


id: PBO:0028418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_nitrosative_stress","termid":"PBO:0028418"}


id: PR:Q9USZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02988","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle 20 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.04","secondary_identifiers":["UniProtKB:Q9USZ5"],"synonyms":[{"name":"Spom972h-TRAPPC2","type":"exact"},{"name":"TRAPP 20 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ5"}


id: GO:0018161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.","direct_ancestors":[{"relation_name":"is_a","term_name":"dipyrrin metabolic process","termid":"GO:0046453"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dipyrrin biosynthetic process","synonyms":[{"name":"dipyrrin anabolism","type":"exact"},{"name":"dipyrrin biosynthesis","type":"exact"},{"name":"dipyrrin formation","type":"exact"},{"name":"dipyrrin synthesis","type":"exact"},{"name":"dipyrromethane biosynthesis","type":"exact"},{"name":"dipyrromethane biosynthetic process","type":"exact"}],"termid":"GO:0018161"}


id: GO:0009804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coumarins, compounds derived from the phenylacrylic skeleton of cinnamic acids.","definition_xrefs":["GOC:lr","GOC:yl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"coumarin metabolic process","synonyms":[{"name":"coumarin metabolism","type":"exact"}],"termid":"GO:0009804"}


id: FYPO:0002313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosterol measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular ergosterol level","termid":"FYPO:0002321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"ergosterol absent from cell","synonyms":[{"name":"ergosterol absent from cell during mitotic cell cycle","type":"related"},{"name":"ergosterol absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002313"}


id: PBO:0108906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPCPD1 pseudogene 1","termid":"PBO:0108906"}


id: PBO:0043405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 2","termid":"PBO:0043405"}


id: PATO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000972 relative permeability (obsolete PATO:0000972)","termid":"PATO:0000972"}


id: PBO:0049019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 1","termid":"PBO:0049019"}


id: PBO:0082866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm F; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm F","termid":"PBO:0082866"}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["GOC:yaf","GOC:dph","PMID:10662642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: PBO:0075860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 8, pseudogene","termid":"PBO:0075860"}


id: GO:0044529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of mitochondrial rRNA molecules to degradation. Includes processes that both stabilize and destabilize mitochondrial rRNAs.","definition_xrefs":["GOC:jl","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of rRNA stability","termid":"GO:0044357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial rRNA stability","termid":"GO:0044529"}


id: PBO:0064200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 8","termid":"PBO:0064200"}


id: GO:1990570
data:
  {"annotated_genes":["SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85193],"is_not":false,"summary":null,"term":"GO:1990570"}]},"cv_name":"biological_process","definition":"The process in which GDP-mannose is transported across a membrane.","definition_xrefs":["PMID:9395539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transport","termid":"GO:0090480"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"GDP-mannose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015784"],"synonyms":[{"name":"GDP-mannose transport","type":"related"}],"termid":"GO:1990570","terms_by_termid":{"GO:1990570":null}}


id: GO:2000898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of glucomannan catabolic process","synonyms":[{"name":"regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000898"}


id: PBO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (predicted)","termid":"PBO:0003118"}


id: FYPO:0006847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased total protein level during vegetative growth","synonyms":[{"name":"increased total protein accumulation during vegetative growth","type":"related"},{"name":"increased total protein content during vegetative growth","type":"exact"},{"name":"increased total protein level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006847"}


id: PBO:0051785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F3","termid":"PBO:0051785"}


id: PBO:0076336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 4","termid":"PBO:0076336"}


id: PBO:0028357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphatase_activity","termid":"PBO:0028357"}


id: GO:1900815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monodictyphenone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"monodictyphenone metabolic process","termid":"GO:1900813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"monodictyphenone biosynthetic process","synonyms":[{"name":"monodictyphenone anabolism","type":"exact"},{"name":"monodictyphenone biosynthesis","type":"exact"},{"name":"monodictyphenone formation","type":"exact"},{"name":"monodictyphenone synthesis","type":"exact"}],"termid":"GO:1900815"}


id: GO:0035318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Extrusion of a cellular projection from the apical membrane of an epithelial cell in an imaginal disc-derived wing. Outgrowth initiates approximately 35 hours after puparium formation from the distal side of the cell, and at this stage the cellular extension is termed a prehair.","definition_xrefs":["GOC:mtg_sensu","PMID:8947551","PMID:11064425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair outgrowth","synonyms":[{"name":"wing hair outgrowth","type":"exact"},{"name":"wing prehair outgrowth","type":"related"}],"termid":"GO:0035318"}


id: MOD:00528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:00528"}


id: PBO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase subunit Trm82 (predicted)","termid":"PBO:0005713"}


id: GO:1903341
data:
  {"annotated_genes":["SJAG_03048","SJAG_00100","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98549,104538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[112401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["PMID:25103240","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903341","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003125","GO:0003126"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GOC:TermGenie","PMID:19575011","GO_REF:0000059","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-UTR binding","termid":"GO:1903837"},{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA 3'-UTR binding","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: PBO:0014312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0014312"}


id: PBO:0074355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 3","termid":"PBO:0074355"}


id: PBO:0027538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_S-phase_DNA_damage_checkpoint_signaling","termid":"PBO:0027538"}


id: PBO:0059223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 5 (gene/pseudogene)","termid":"PBO:0059223"}


id: GO:0051383
data:
  {"annotated_genes":["SJAG_02513","SJAG_04177","SJAG_05321","SJAG_00718","SJAG_00794","SJAG_01374","SJAG_03048","SJAG_04638","SJAG_03217","SJAG_01837","SJAG_03220","SJAG_02664","SJAG_02465"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87145,91489],"is_not":false,"summary":null,"term":"GO:0051383"},{"annotations":[86979,113584,101644,101717,109736,108365,106499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051382"},{"annotations":[114076],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[85857,98547,112838],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00794":null,"SJAG_01374":null,"SJAG_01837":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_04177":null,"SJAG_04638":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinetochore organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"kinetochore organisation","type":"exact"},{"name":"kinetochore organization and biogenesis","type":"related"}],"termid":"GO:0051383","terms_by_termid":{"GO:0051382":null,"GO:0051383":null,"GO:1905560":null,"GO:1905561":null}}


id: GO:0036137
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016212"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from kynurenine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["EC:2.6.1.-","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"kynurenine aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-kynurenine transaminase activity","type":"exact"},{"name":"kynurenine-oxo-acid transaminase activity","type":"narrow"}],"termid":"GO:0036137","terms_by_termid":{"GO:0016212":null}}


id: PR:Q9UT74
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoaconitase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.16","synonyms":[{"name":"Spom972h-lys2","type":"exact"},{"name":"homoaconitate hydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT74"}


id: PBO:0089559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef1","termid":"PBO:0089559"}


id: GO:0160010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2-hydroxyisobutanoyl)-L-lysyl-[protein] = 2-hydroxy-2-methylpropanoate + L-lysyl-[protein].","definition_xrefs":["PMID:29192674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"protein de-2-hydroxyisobutyrylase activity","secondary_identifiers":["RHEA:69176"],"termid":"GO:0160010"}


id: PBO:0090022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown protein, may bind replication origins Abp2","termid":"PBO:0090022"}


id: SO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of DNA that originates from a an organelle.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organelle_sequence","synonyms":[{"name":"organelle sequence","type":"exact"}],"termid":"SO:0000736"}


id: GO:0051985
data:
  {"annotated_genes":["SJAG_04126","SJAG_03048","SJAG_04259","SJAG_03126","SJAG_04999","SJAG_00460","SJAG_01679","SJAG_01330","SJAG_02336","SJAG_01515","SJAG_02451","SJAG_01297","SJAG_01837","SJAG_04884","SJAG_01082","SJAG_04699","SJAG_03327","SJAG_02169","SJAG_00883","SJAG_03353","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100069,108140,104435,103408,109966,112062,86924,95750,110441],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102484,110667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[102485,97964,112832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[97965,112835,110670,109970,111710,106096,86926,95599,102486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[98534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[94867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[102487,111711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90377],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109971],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112839],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97499],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90378],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"negatively_regulates","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome segregation","type":"exact"},{"name":"down-regulation of chromosome segregation","type":"exact"},{"name":"downregulation of chromosome segregation","type":"exact"},{"name":"inhibition of chromosome segregation","type":"narrow"}],"termid":"GO:0051985","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902424":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000816":null}}


id: GO:0141090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein phospho-serine + inositol 5-triphosphate pentakisphosphate = protein diphospho-serine + inositol 5-diphosphate pentakisphosphate.","definition_xrefs":["PMID:36603579","RHEA:64104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein serine pyrophosphorylase activity","synonyms":[{"name":"protein serine pyrophosphatase activity","type":"related"}],"termid":"GO:0141090"}


id: GO:0004047
data:
  {"annotated_genes":["SJAG_02901","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92585,109213],"is_not":false,"summary":null,"term":"GO:0004047"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein.","definition_xrefs":["EC:2.1.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"aminomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693977","MetaCyc:GCVT-RXN","RHEA:16945"],"synonyms":[{"name":"S-aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"T-protein","type":"related"},{"name":"glycine synthase activity","type":"related"},{"name":"glycine-cleavage system T-protein activity","type":"related"},{"name":"protein-8-S-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"protein-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"tetrahydrofolate aminomethyltransferase activity","type":"related"}],"termid":"GO:0004047","terms_by_termid":{"GO:0004047":null}}


id: PBO:0084005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine (GroPCho) phosphodiesterase; hydrolyzes GroPCho to choline and glycerolphosphate, for use as a phosphate source and as a precursor for phosphocholine synthesis; may interact with ribosomes","termid":"PBO:0084005"}


id: GO:0099605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency of action potentials in a spike train.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing rate","termid":"GO:0099605"}


id: GO:0072118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the pronephros. This process pertains to the physical shaping of a rudimentary structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros structural organization","synonyms":[{"name":"pronephric kidney structural organization","type":"exact"},{"name":"pronephros structural organisation","type":"exact"}],"termid":"GO:0072118"}


id: PBO:0083263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 4% of ORF overlaps the verified gene RGP1; deletion causes a vacuolar protein sorting defect","termid":"PBO:0083263"}


id: FYPO:0007189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sampangine. Cells stop growing (and may die) at a concentration of sampangine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sampangine","synonyms":[{"name":"hypersensitive to sampangine","type":"exact"},{"name":"sensitive to sampangine during mitotic cell cycle","type":"related"},{"name":"sensitive to sampangine during vegetative growth","type":"exact"}],"termid":"FYPO:0007189"}


id: GO:0006608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNP protein import into nucleus (obsolete GO:0006608)","synonyms":[{"name":"snRNP protein import into cell nucleus","type":"exact"},{"name":"snRNP protein transport from cytoplasm to nucleus","type":"exact"},{"name":"snRNP protein-nucleus import","type":"exact"}],"termid":"GO:0006608"}


id: PATO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"contractile","termid":"PATO:0001690"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased contractility","synonyms":[{"name":"low contractility","type":"exact"}],"termid":"PATO:0001581"}


id: GO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"neutrophil mediated immunity","termid":"GO:0002446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated cytotoxicity","synonyms":[{"name":"neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070942"}


id: GO:0061757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a leukocyte to an arterial endothelial cell via adhesion molecules.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","GOC:BHF","PMID:22267480","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}


id: PBO:0017076
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P enzyme-substrate contact points identified using pre-tRNAs with modified bases","termid":"PBO:0017076"}


id: GO:0019293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of phenylalanine to tyrosine.","definition_xrefs":["PMID:4004813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"tyrosine biosynthetic process, by oxidation of phenylalanine","secondary_identifiers":["GO:0019291","MetaCyc:PWY-6134"],"synonyms":[{"name":"L-tyrosine biosynthesis IV","type":"exact"},{"name":"tyrosine anabolism, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine formation, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine synthesis, by oxidation of phenylalanine","type":"exact"}],"termid":"GO:0019293"}


id: PBO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue3 (predicted)","termid":"PBO:0005728"}


id: PBO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.41","termid":"PBO:0002333"}


id: PBO:0039417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 2","termid":"PBO:0039417"}


id: PBO:0047015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A18","termid":"PBO:0047015"}


id: PBO:0027023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization,_with_protein_distributed_in_nucleus","termid":"PBO:0027023"}


id: GO:0051734
data:
  {"annotated_genes":["SJAG_01791","SJAG_01979","SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84363,89885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[89652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephosphopolynucleotide = ADP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["EC:2.7.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent polynucleotide kinase activity","type":"related"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051734","terms_by_termid":{"GO:0046404":null,"GO:0051736":null}}


id: PBO:0082274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anchorage subunit of a-agglutinin of a-cells; highly O-glycosylated protein with N-terminal secretion signal and C-terminal signal for addition of GPI anchor to cell wall, linked to adhesion subunit Aga2p via two disulfide bonds; AGA1 has a paralog, FIG2, that arose from the whole genome duplication","termid":"PBO:0082274"}


id: GO:0106364
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99415],"is_not":false,"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"4-hydroxy-3-all-trans-hexaprenylbenzoate + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 3,4-dihydroxy-5-all-trans-hexaprenylbenzoate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["PMID:21944752","RHEA:20361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-all-trans-hexaprenylbenzoate oxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106364","terms_by_termid":{"GO:0106364":null}}


id: GO:0048048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic eye morphogenesis","termid":"GO:0048048"}


id: PBO:0051468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-56 (pseudogene)","termid":"PBO:0051468"}


id: PBO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 4","termid":"PBO:0061346"}


id: PBO:0085517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S18 and bacterial S13; RPS18A has a paralog, RPS18B, that arose from the whole genome duplication; protein increases in abundance and relocalizes from cytoplasm to nuclear foci upon DNA replication stress","termid":"PBO:0085517"}


id: GO:1901626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of postsynaptic membrane organization","synonyms":[{"name":"regulation of post-synaptic membrane organization","type":"exact"},{"name":"regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901626"}


id: PBO:0086714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant is deficient in cell wall mannosylphosphate and has long chronological lifespan; genetic interactions suggest a role in ER-associated protein degradation (ERAD); SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086714"}


id: PBO:0042575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2B","termid":"PBO:0042575"}


id: PBO:0039589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7","termid":"PBO:0039589"}


id: PBO:0061237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP53 ribosome biogenesis factor","termid":"PBO:0061237"}


id: PBO:0004134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like conjugating enzyme Atg7","termid":"PBO:0004134"}


id: PBO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.11","termid":"PBO:0002698"}


id: GO:1902415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA binding.","definition_xrefs":["GOC:rb","PMID:22890846","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA binding","termid":"GO:1902415"}


id: PBO:0089713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Dbl2","termid":"PBO:0089713"}


id: PBO:0002726
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains homolD box","termid":"PBO:0002726"}


id: GO:0032729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type II interferon production","termid":"GO:0032649"},{"relation_name":"positively_regulates","term_name":"type II interferon production","termid":"GO:0032609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type II interferon production","secondary_identifiers":["GO:1902715","GO:0045078"],"synonyms":[{"name":"activation of interferon-gamma production","type":"narrow"},{"name":"positive regulation of interferon-gamma biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-gamma production","type":"exact"},{"name":"positive regulation of interferon-gamma secretion","type":"narrow"},{"name":"stimulation of interferon-gamma production","type":"narrow"},{"name":"up regulation of interferon-gamma production","type":"exact"},{"name":"up-regulation of interferon-gamma production","type":"exact"},{"name":"upregulation of interferon-gamma production","type":"exact"}],"termid":"GO:0032729"}


id: PBO:0089585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing","termid":"PBO:0089585"}


id: GO:0052204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the functional activity of proteins in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function in other organism involved in symbiotic interaction (obsolete GO:0052204)","synonyms":[{"name":"down regulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"down-regulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"downregulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"inhibition of protein function in other organism","type":"exact"},{"name":"inhibition of protein function in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of protein function in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052204"}


id: PBO:0027102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rDNA_antisense_small_RNA_level","termid":"PBO:0027102"}


id: RO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c acts upstream of or within p if c is enables 'p' and p' causally upstream of or within p","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","synonyms":[{"name":"affects","type":"related"}],"termid":"RO:0002264"}


id: PBO:0083876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box receptor protein; subunit of the Skp1-Cdc53-F-box receptor (SCF) E3 ubiquitin ligase complex; binds to phosphorylated Ho endonuclease, allowing its ubiquitination by SCF and subsequent degradation","termid":"PBO:0083876"}


id: PBO:0027155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glutamine_level","termid":"PBO:0027155"}


id: PBO:0080802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin for tRNA","termid":"PBO:0080802"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: PBO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 like E3 ubiquitin protein ligase","termid":"PBO:0060834"}


id: PATO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having the shape of a kidney.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reniform","synonyms":[{"name":"bean shaped","type":"related"},{"name":"kidney-shaped","type":"exact"}],"termid":"PATO:0001871"}


id: GO:0098599
data:
  {"annotated_genes":["SJAG_00734","SJAG_00774","SJAG_02056","SJAG_03377","SJAG_02268"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107092,105185,89700,97103,96723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoyl moiety from some substrate.","definition_xrefs":["GOC:pg","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoyl hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5690046","Reactome:R-HSA-9027670"],"termid":"GO:0098599","terms_by_termid":{"GO:0008474":null}}


id: PR:O74749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hse1 gene.","definition_xrefs":["UniProtKB:O74749","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class E vacuolar protein-sorting machinery protein hse1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.08","synonyms":[{"name":"Spom972h-hse1","type":"exact"}],"termid":"PR:O74749"}


id: GO:1905441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 4'-sulfate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22365850","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chondroitin 4'-sulfate","termid":"GO:1905441"}


id: PBO:0061168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 6-1","termid":"PBO:0061168"}


id: GO:1900533
data:
  {"annotated_genes":["SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"palmitic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900533","terms_by_termid":{"GO:1900535":null}}


id: PBO:0083692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme regulator; involved in synthesis of phosphatidylinositol 3,5-bisphosphate, in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; binds negative (Fig4p) and positive (Fab1p) regulators of PtdIns(3,5)P(2) to control endolysosome function; similar to mammalian Vac14p","termid":"PBO:0083692"}


id: PBO:0091974
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL-Associated Factor","termid":"PBO:0091974"}


id: PBO:0082371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor","termid":"PBO:0082371"}


id: GO:0035982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["PMID:20523893","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent behavioral decline (obsolete GO:0035982)","synonyms":[{"name":"age-dependent behavioural decline","type":"exact"},{"name":"age-related behavioral decline","type":"exact"},{"name":"behavioral aging","type":"exact"}],"termid":"GO:0035982"}


id: PBO:0057761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1976","termid":"PBO:0057761"}


id: PBO:0059511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome b","termid":"PBO:0059511"}


id: GO:0033478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-L-rhamnose, a substance composed of rhamnose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah","PMID:15134748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-rhamnose metabolic process","secondary_identifiers":["MetaCyc:PWY-3261"],"synonyms":[{"name":"UDP-rhamnose metabolism","type":"exact"}],"termid":"GO:0033478"}


id: GO:0032865
data:
  {"annotated_genes":["SJAG_04370","SJAG_03710","SJAG_01929","SJAG_03416","SJAG_01305","SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87097,102009,103198,103700,103829,112776],"is_not":false,"summary":null,"term":"GO:0032865"}]},"cv_name":"cellular_component","definition":"A protein complex that links the endoplasmic reticulum with mitochondria and may have a role in promoting exchange of calcium and phospholipids between the two organelles.","definition_xrefs":["GOC:mcc","PMID:19556461","PMID:29279306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"mitochondria-associated endoplasmic reticulum membrane contact site","termid":"GO:0044233"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"ERMES complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondria encounter structure","type":"exact"},{"name":"MMM1 complex","type":"exact"},{"name":"Mdm10/Mdm12/Mmm1 complex","type":"exact"},{"name":"mitochore","type":"exact"}],"termid":"GO:0032865","terms_by_termid":{"GO:0032865":null}}


id: GO:0075002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a germination tube of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont germination tube to host","synonyms":[{"name":"adhesion of symbiont germination tube to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075002"}


id: GO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructoseglycine, a fructose molecule containing a glycine group in place of a hydroxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fructoseglycine metabolic process","synonyms":[{"name":"fructoseglycine metabolism","type":"exact"}],"termid":"GO:0030394"}


id: GO:0007492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoderm development","termid":"GO:0007492"}


id: PBO:0089855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15","termid":"PBO:0089855"}


id: GO:0044176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin, stiff protrusion extended by the leading edge of a motile host cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell projection","termid":"GO:0044157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell filopodium","synonyms":[{"name":"host filopodium","type":"exact"}],"termid":"GO:0044176"}


id: PBO:0038379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurent_part_of","termid":"PBO:0038379"}


id: PBO:0083916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin; polarisome component; nucleates the formation of linear actin filaments, involved in cell processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables; recruited to the division site in a Glc7p/Ref2p dependent manner following release of Bnr1p; functionally redundant with BNR1","termid":"PBO:0083916"}


id: PBO:0049134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein pathway suppressor 2","termid":"PBO:0049134"}


id: PBO:0058617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6749","termid":"PBO:0058617"}


id: PBO:0080340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 104 pseudogene","termid":"PBO:0080340"}


id: PBO:0074736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 94","termid":"PBO:0074736"}


id: PBO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR pseudogene 2","termid":"PBO:0044260"}


id: GO:0055121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a high fluence blue light stimulus by the blue high-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue high-fluence system responds to blue light at levels between 100 and 1000 micromols/m2.","definition_xrefs":["GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"response to high light intensity","termid":"GO:0009644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to high fluence blue light stimulus by blue high-fluence system","synonyms":[{"name":"response to high fluence blue light","type":"broad"},{"name":"response to high fluence blue light by bhf system","type":"related"}],"termid":"GO:0055121"}


id: PBO:0028355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity","termid":"PBO:0028355"}


id: PBO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B11","termid":"PBO:0045200"}


id: GO:1990125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotetrameric protein complex consisting of a symmetrical pair of DiaA homodimers. Facilitates DnaA binding to the origin of replication during replication initiation.","definition_xrefs":["PMID:17699754","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DiaA complex","synonyms":[{"name":"DiaA homotetramer","type":"exact"}],"termid":"GO:1990125"}


id: GO:0005771
data:
  {"annotated_genes":["SJAG_02100","SJAG_05207","SJAG_03783","SJAG_00181","SJAG_04047","SJAG_00416","SJAG_01088","SJAG_01242","SJAG_04643","SJAG_00900","SJAG_04489","SJAG_03892","SJAG_03976","SJAG_05210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84186,84838,94134,97054,99317,99903,101919,102732,109488,110616,111038,115574],"is_not":false,"summary":null,"term":"GO:0005771"},{"annotations":[115576,88297,90102],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"A type of endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.","definition_xrefs":["PMID:11566881","PMID:16533950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00416":null,"SJAG_00900":null,"SJAG_01088":null,"SJAG_01242":null,"SJAG_02100":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03976":null,"SJAG_04047":null,"SJAG_04489":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"multivesicular body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao2045955158"],"synonyms":[{"name":"MVB","type":"exact"},{"name":"MVE","type":"exact"},{"name":"multivesicular endosome","type":"exact"}],"termid":"GO:0005771","terms_by_termid":{"GO:0005771":null,"GO:0032585":null}}


id: PBO:0108691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Spo7","termid":"PBO:0108691"}


id: GO:0141095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism in which a methylated cytosine residues in the genome promote heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:15318244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotransposon silencing by DNA methylation-dependent heterochromatin formation","termid":"GO:0141095"}


id: GO:0042071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a leucokinin, any of several octapeptide hormones found in insects, and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["PMID:2716741","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leucokinin receptor activity","termid":"GO:0042071"}


id: PBO:0067315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 401, pseudogene","termid":"PBO:0067315"}


id: PBO:0069295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 551, pseudogene","termid":"PBO:0069295"}


id: PBO:0087955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane histidine phosphotransfer kinase and osmosensor; regulates MAP kinase cascade; transmembrane protein with an intracellular kinase domain that signals to Ypd1p and Ssk1p, thereby forming a phosphorelay system similar to bacterial two-component regulators","termid":"PBO:0087955"}


id: PBO:0052915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 15-1","termid":"PBO:0052915"}


id: PR:P36626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec8 gene.","definition_xrefs":["UniProtKB:P36626","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"SPBC29A10.14","type":"related"},{"name":"Spom972h-rec8","type":"exact"},{"name":"cohesin rec8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36626"}


id: GO:0102611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-secoisolariciresinol monoglucoside + UDP-alpha-D-glucose = (+)-secoisolariciresinol diglucoside + UDP + H+.","definition_xrefs":["GOC:pz","PMID:24678929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"(+)-secoisolariciresinol monoglucoside glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15443"],"termid":"GO:0102611"}


id: PBO:0026797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proteasome_regulatory_particle_binding","termid":"PBO:0026797"}


id: PBO:0057200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 372","termid":"PBO:0057200"}


id: PBO:0040816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA antisense RNA 1","termid":"PBO:0040816"}


id: CHEBI:30911
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucitol","termid":"CHEBI:30911"}


id: PBO:0044937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGUOK antisense RNA 1","termid":"PBO:0044937"}


id: GO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-sinapoylcholine + H2O = choline + H+ + sinapate.","definition_xrefs":["EC:3.1.1.49","RHEA:10016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sinapine esterase activity","secondary_identifiers":["KEGG_REACTION:R02381","MetaCyc:SINAPINE-ESTERASE-RXN"],"synonyms":[{"name":"aromatic choline esterase activity","type":"related"},{"name":"sinapoylcholine sinapohydrolase activity","type":"related"}],"termid":"GO:0050285"}


id: GO:0019682
data:
  {"annotated_genes":["SJAG_00070","SJAG_03934","SJAG_04192","SJAG_00501","SJAG_04263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[92542,85157,109998,104608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate metabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate metabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate metabolism","type":"exact"}],"termid":"GO:0019682","terms_by_termid":{"GO:0009052":null,"GO:0046166":null}}


id: GO:0097097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nasal suture is generated and organized.","definition_xrefs":["GOC:pr","GOC:sl","Wikipedia:Cranial_sutures","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial suture morphogenesis","termid":"GO:0097096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nasal suture morphogenesis","synonyms":[{"name":"internasal suture morphogenesis","type":"exact"}],"termid":"GO:0097097"}


id: PBO:0091119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane chaperone for multipass membrane proteins, PAT complex subunit (asterix), Pat10","termid":"PBO:0091119"}


id: PBO:0027415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027415"}


id: GO:0086052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an SA node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during SA node cell action potential","synonyms":[{"name":"membrane repolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086052"}


id: PBO:0077455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 5","termid":"PBO:0077455"}


id: PBO:0089946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S33","termid":"PBO:0089946"}


id: PBO:0036114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0036114"}


id: FYPO:0007880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PMID:34608864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein degradation during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein breakdown during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein catabolic process during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein catabolism during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein degradation during cellular response to MMS","type":"exact"},{"name":"normal protein degradation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0007880"}


id: PBO:0056596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 1","termid":"PBO:0056596"}


id: PBO:0051552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9 receptor pseudogene 2","termid":"PBO:0051552"}


id: PBO:0071163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 2","termid":"PBO:0071163"}


id: PBO:0057968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689a","termid":"PBO:0057968"}


id: GO:0045980
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187","SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72033,75078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[107550,111634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_02380":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nucleotide metabolic process","type":"exact"},{"name":"down-regulation of nucleotide metabolic process","type":"exact"},{"name":"downregulation of nucleotide metabolic process","type":"exact"},{"name":"inhibition of nucleotide metabolic process","type":"narrow"},{"name":"negative regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0045980","terms_by_termid":{"GO:0045820":null,"GO:2001211":null}}


id: PBO:0041808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 19","termid":"PBO:0041808"}


id: PBO:0043002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase acidic","termid":"PBO:0043002"}


id: PBO:0029612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_cell","termid":"PBO:0029612"}


id: PBO:0055343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2771","termid":"PBO:0055343"}


id: FYPO:0003818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 5'-3' DNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abolished 5'-3' DNA helicase activity","synonyms":[{"name":"5'-3' DNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0003818"}


id: GO:0019089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions in order to create new infection.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete transmission of virus (obsolete GO:0019089)","synonyms":[{"name":"viral transmission","type":"exact"}],"termid":"GO:0019089"}


id: PR:Q8TFF8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB8B6.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.05c","synonyms":[{"name":"L-asparagine amidohydrolase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBPB8B6.05c","type":"exact"}],"termid":"PR:Q8TFF8"}


id: GO:1990294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of a peptidyl-threonine to form peptidyl-O-phospho-L-threonine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:19357077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"},{"relation_name":"is_a","term_name":"protein trans-autophosphorylation","termid":"GO:0036290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine trans-autophosphorylation","termid":"GO:1990294"}


id: PBO:0090438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm6","termid":"PBO:0090438"}


id: PBO:0091283
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergently oriented to functionally related gene","termid":"PBO:0091283"}


id: PBO:0039747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein N, pseudogene","termid":"PBO:0039747"}


id: PR:P87237
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4G3.12c gene.","definition_xrefs":["UniProtKB:P87237","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C4G3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.12c","synonyms":[{"name":"Spom972h-SPCC4G3.12c","type":"exact"}],"termid":"PR:P87237"}


id: SO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recoded mRNA where a block of nucleotides is not translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_by_translational_bypass","synonyms":[{"name":"recoded by translational bypass","type":"exact"}],"termid":"SO:0000886"}


id: GO:1902652
data:
  {"annotated_genes":["SJAG_04059","SJAG_04790","SJAG_00502","SJAG_03249","SJAG_02719","SJAG_02068","SJAG_04362","SJAG_03235","SJAG_04810","SJAG_04270","SJAG_04018","SJAG_03352","SJAG_04217","SJAG_00580","SJAG_04049","SJAG_00717","SJAG_03929","SJAG_03024","SJAG_03531","SJAG_03349","SJAG_03509","SJAG_03750","SJAG_00370","SJAG_00413","SJAG_01474","SJAG_00770","SJAG_02855","SJAG_04499","SJAG_00158","SJAG_02982","SJAG_04865","SJAG_03598","SJAG_00453","SJAG_02044","SJAG_03715","SJAG_02104","SJAG_01307","SJAG_03018","SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112706,87673,100624,106269,107990,100439,85866,111065,114994,104024,88727,94219,90621,107483,103710,88780,84704,84985,95019,111237,105427,84952,92770,103891,105669,95756,90812,100169,102699,100866,84923,111395,99531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[92532,95936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006102"},{"annotations":[90066],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[106039],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[106040],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84792,84793,102005],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving secondary alcohol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","GO_REF:0000068","PMID:11288200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00502":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04362":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"secondary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol metabolism","type":"exact"}],"termid":"GO:1902652","terms_by_termid":{"GO:0006102":null,"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


