# terms

id: PR:Q7Z9I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf7 gene.","definition_xrefs":["UniProtKB:Q7Z9I5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.05","synonyms":[{"name":"Spom972h-wtf7","type":"exact"}],"termid":"PR:Q7Z9I5"}


id: PBO:0046827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5","termid":"PBO:0046827"}


id: GO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-5 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-5 receptor activity","synonyms":[{"name":"IL-5 receptor activity","type":"exact"},{"name":"IL-5R","type":"exact"}],"termid":"GO:0004914"}


id: GO:0070594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a juvenile hormone response element (JHRE), a conserved sequence found in the promoters of genes whose expression is regulated in response to juvenile hormone.","definition_xrefs":["GOC:sart","PMID:17956872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488","GO:0000976"],"is_obsolete":false,"name":"juvenile hormone response element binding","synonyms":[{"name":"JHRE binding","type":"exact"}],"termid":"GO:0070594"}


id: PBO:0054846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2260","termid":"PBO:0054846"}


id: GO:0060049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein glycosylation. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:pr","GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"regulation of protein glycosylation","synonyms":[{"name":"regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060049"}


id: GO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions that takes place outside the cell occurring in response to tissue damage and initiated within blood plasma by the action of activated Factor XII (Hageman Factor) on prekallikrein to convert it to plasma kallikrein, and the subsequent reaction of plasma kallikrein with high molecular weight kininogen. The ultimate product of the plasma kallikrein-kinin cascade is bradykinin, an agent known to induce smooth muscle contraction, vasoconstriction, and increased vascular permeability.","definition_xrefs":["GOC:add","PMID:14501145","ISBN:0721601871","PMID:11842287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"plasma kallikrein-kinin cascade","termid":"GO:0002353"}


id: GO:0042531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:11426647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"positively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042517","GO:0042529","GO:0042526","GO:0042523","GO:0042511","GO:0042520","GO:0042515"],"synonyms":[{"name":"activation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"upregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042531"}


id: GO:1905921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acetylcholine biosynthetic process.","definition_xrefs":["GOC:bc","GOC:TermGenie","GO_REF:0000058","GOC:aruk","PMID:20164328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"regulates","term_name":"acetylcholine biosynthetic process","termid":"GO:0008292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine biosynthetic process","synonyms":[{"name":"regulation of acetylcholine anabolism","type":"exact"},{"name":"regulation of acetylcholine biosynthesis","type":"exact"},{"name":"regulation of acetylcholine formation","type":"exact"},{"name":"regulation of acetylcholine synthesis","type":"exact"}],"termid":"GO:1905921"}


id: PBO:0031907
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia","termid":"PBO:0031907"}


id: GO:0032000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid oxidation","termid":"GO:0046321"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"positively_regulates","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation","synonyms":[{"name":"activation of fatty acid beta-oxidation","type":"narrow"},{"name":"stimulation of fatty acid beta-oxidation","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation","type":"exact"}],"termid":"GO:0032000"}


id: GO:0033457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GAU codon-amino acid adaptor activity","synonyms":[{"name":"GAT codon-amino acid adaptor activity","type":"exact"},{"name":"aspartic acid tRNA","type":"related"}],"termid":"GO:0033457"}


id: PBO:0080173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 8","termid":"PBO:0080173"}


id: PBO:0014246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1 (predicted)","termid":"PBO:0014246"}


id: GO:0032161
data:
  {"annotated_genes":["SJAG_04566","SJAG_02645","SJAG_03703","SJAG_01658","SJAG_00663","SJAG_04470","SJAG_01769","SJAG_04703","SJAG_04375","SJAG_01277","SJAG_03688","SJAG_03374","SJAG_00118"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114757,108953,93995,100092,104133,96269,97120,97935,94070,113999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[102179,90679,96275,112132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"Any of a series of structures composed of septins and septin-associated proteins localized to the cleavage plane which are involved in cytokinesis.","definition_xrefs":["PMID:16009555","GOC:krc","PMID:15774761","PMID:12101122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cleavage apparatus septin structure","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032161","terms_by_termid":{"GO:0032169":null,"GO:0036391":null}}


id: GO:0050567
data:
  {"annotated_genes":["SJAG_02721","SJAG_05560","SJAG_01577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92842,107469,114523],"is_not":false,"summary":null,"term":"GO:0050567"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + glutamyl-tRNA(Gln) + ATP = L-glutamate + glutaminyl-tRNA(Gln) + phosphate + ADP.","definition_xrefs":["EC:6.3.5.7","MetaCyc:6.3.5.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0003824","GO:0140098","GO:0016874"],"is_obsolete":false,"name":"glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glutaminyl-tRNA_synthase_(glutamine-hydrolysing)","GO:0017068","GO:0008264","RHEA:17521"],"synonyms":[{"name":"Glu-AdT activity","type":"related"},{"name":"Glu-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"glutaminyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"glutamyl-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050567","terms_by_termid":{"GO:0050567":null}}


id: PBO:0089044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph3","termid":"PBO:0089044"}


id: PBO:0081507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 414","termid":"PBO:0081507"}


id: SO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GTGRGAA, bound by CSL (CBF1/RBP-JK/Suppressor of Hairless/LAG-1) transcription factors.","definition_xrefs":["PMID:19101542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSL_response_element","synonyms":[{"name":"CSL response element","type":"exact"}],"termid":"SO:0001839"}


id: PBO:0039790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 1","termid":"PBO:0039790"}


id: GO:0052147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in host (obsolete GO:0052147)","synonyms":[{"name":"positive energy taxis within host","type":"exact"}],"termid":"GO:0052147"}


id: PBO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 2","termid":"PBO:0045542"}


id: PBO:0088988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase Pmt1","termid":"PBO:0088988"}


id: PBO:0062555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 2","termid":"PBO:0062555"}


id: GO:1902797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GOC:TermGenie","PMID:24210919","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of snoRNA processing","termid":"GO:1902796"},{"relation_name":"is_a","term_name":"negative regulation of snoRNA metabolic process","termid":"GO:1903324"},{"relation_name":"negatively_regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of snoRNA processing","synonyms":[{"name":"down regulation of snoRNA processing","type":"exact"},{"name":"down-regulation of snoRNA processing","type":"exact"},{"name":"downregulation of snoRNA processing","type":"exact"},{"name":"inhibition of snoRNA processing","type":"narrow"}],"termid":"GO:1902797"}


id: GO:0003285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the septum secundum over time, from its initial formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum secundum development","termid":"GO:0003285"}


id: PBO:0090649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc complex subunit Noc202","termid":"PBO:0090649"}


id: PBO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 9","termid":"PBO:0040021"}


id: GO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD81, a member of the tetraspan family.","definition_xrefs":["PMID:10229664","PMID:8757325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD81 complex","synonyms":[{"name":"ITGA4-ITGB1-CD81 complex","type":"narrow"}],"termid":"GO:0070520"}


id: GO:0052520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of nutrient release from other organism involved in symbiotic interaction (obsolete GO:0052520)","synonyms":[{"name":"activation by organism of nutrient release from other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"promotion of nutrient release from other organism","type":"exact"},{"name":"stimulation by organism of nutrient release from other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052520"}


id: GO:2000315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0045743"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"positive regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000315"}


id: FYPO:0003264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis I. The order of nuclei in the resulting ascus differs from normal as a result.","definition_xrefs":["PMID:24196444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000120","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"overlapping meiosis I spindles","synonyms":[{"name":"overlapping spindles at meiosis I","type":"exact"},{"name":"overlapping spindles during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003264"}


id: GO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide production","synonyms":[{"name":"activation of antibacterial peptide production","type":"narrow"},{"name":"stimulation of antibacterial peptide production","type":"narrow"},{"name":"up regulation of antibacterial peptide production","type":"exact"},{"name":"up-regulation of antibacterial peptide production","type":"exact"},{"name":"upregulation of antibacterial peptide production","type":"exact"}],"termid":"GO:0002803"}


id: GO:0010189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin E metabolic process","termid":"GO:0042360"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin E biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1422"],"synonyms":[{"name":"alpha-tocopherol biosynthesis","type":"narrow"},{"name":"alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"tocopherol biosynthesis","type":"exact"},{"name":"tocopherol biosynthetic process","type":"exact"},{"name":"vitamin E anabolism","type":"exact"},{"name":"vitamin E biosynthesis","type":"exact"},{"name":"vitamin E formation","type":"exact"},{"name":"vitamin E synthesis","type":"exact"}],"termid":"GO:0010189"}


id: PBO:0043515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 4","termid":"PBO:0043515"}


id: GO:0071710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a macromolecule destined to form part of a membrane in a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"membrane macromolecule biosynthetic process","synonyms":[{"name":"membrane macromolecule anabolism","type":"exact"},{"name":"membrane macromolecule biosynthesis","type":"exact"},{"name":"membrane macromolecule formation","type":"exact"},{"name":"membrane macromolecule synthesis","type":"exact"}],"termid":"GO:0071710"}


id: GO:0051188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a cofactor, a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor biosynthetic process (obsolete GO:0051188)","synonyms":[{"name":"cofactor anabolism","type":"exact"},{"name":"cofactor biosynthesis","type":"exact"},{"name":"cofactor formation","type":"exact"},{"name":"cofactor synthesis","type":"exact"}],"termid":"GO:0051188"}


id: PBO:0081209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 1","termid":"PBO:0081209"}


id: PBO:0082474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk2p; localizes to P-bodies during stationary phase; TPK3 has a paralog, TPK1, that arose from the whole genome duplication","termid":"PBO:0082474"}


id: GO:0033689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"negatively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast proliferation","synonyms":[{"name":"down regulation of osteoblast proliferation","type":"exact"},{"name":"down-regulation of osteoblast proliferation","type":"exact"},{"name":"downregulation of osteoblast proliferation","type":"exact"},{"name":"inhibition of osteoblast proliferation","type":"narrow"}],"termid":"GO:0033689"}


id: SO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The minimal portion of the promoter required to properly initiate transcription in RNA polymerase II transcribed genes.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_core_promoter","synonyms":[{"name":"RNApol II core promoter","type":"exact"}],"termid":"SO:0001669"}


id: GO:0032381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"negative regulation of intracellular lipid transport","termid":"GO:0032378"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"negatively_regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular sterol transport","synonyms":[{"name":"down regulation of intracellular sterol transport","type":"exact"},{"name":"down-regulation of intracellular sterol transport","type":"exact"},{"name":"downregulation of intracellular sterol transport","type":"exact"},{"name":"inhibition of intracellular sterol transport","type":"narrow"}],"termid":"GO:0032381"}


id: PBO:0017677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large and small subunit Gsa1","termid":"PBO:0017677"}


id: PBO:0028860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0028860"}


id: PR:Q09140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose:glycoprotein glucosyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02557","PRO:DNx","PANTHER:PTHR11226:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.06","secondary_identifiers":["UniProtKB:Q09140"],"synonyms":[{"name":"Spom972h-UGGT1","type":"exact"},{"name":"UDP--Glc:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UGT (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09140"}


id: PR:Q9UUJ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01984","PANTHER:PTHR11937:SF37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.06","secondary_identifiers":["UniProtKB:Q9UUJ1"],"synonyms":[{"name":"Spom972h-ACTR2","type":"exact"},{"name":"actin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ1"}


id: PBO:0070360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 36","termid":"PBO:0070360"}


id: GO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of apoptosis in the bitten organism.","definition_xrefs":["GOC:jl","PMID:17983639","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of apoptotic process in another organism (obsolete GO:0044534)","synonyms":[{"name":"envenomation resulting in modulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044534"}


id: GO:1903144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any actin filament that is part of a actomyosin contractile ring.","definition_xrefs":["PMID:24954052","GO_REF:0000064","GOC:TermGenie","PMID:20807799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament","termid":"GO:0005884"},{"relation_name":"part_of","term_name":"actomyosin contractile ring","termid":"GO:0005826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0070938","GO:0005938","GO:0015629","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"actomyosin contractile ring actin filament","synonyms":[{"name":"actin filament of CAR","type":"exact"},{"name":"actin filament of actomyosin contractile ring","type":"exact"},{"name":"actin filament of actomyosin ring","type":"exact"},{"name":"actin filament of contractile actomyosin ring","type":"exact"},{"name":"actin filament of cytokinetic ring","type":"exact"}],"termid":"GO:1903144"}


id: PBO:0017786
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminoacyl tRNA Synthetase Cofactor","termid":"PBO:0017786"}


id: PBO:0036453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microvillus inclusion disease","termid":"PBO:0036453"}


id: PBO:0030757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amphotericin_B","termid":"PBO:0030757"}


id: PBO:0047477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 4","termid":"PBO:0047477"}


id: RO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the relationship holds based on the presence or absence of statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_dependence_to","termid":"RO:0002609"}


id: GO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"},{"relation_name":"part_of","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"}


id: PBO:0086720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0086720"}


id: FYPO:0004606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the meiotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during meiotic cell cycle","synonyms":[{"name":"normal cellular protein level during meiotic cell cycle","type":"exact"},{"name":"normal protein accumulation during meiotic cell cycle","type":"related"}],"termid":"FYPO:0004606"}


id: PBO:0043157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 25","termid":"PBO:0043157"}


id: FYPO:0007421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions during G0 phase. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription at telomere","termid":"FYPO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription at telomere during G0","synonyms":[{"name":"increased telomeric transcription during G0","type":"exact"},{"name":"increased transcription at telomere during cell quiescence","type":"exact"},{"name":"increased transcription at telomere during quiescence","type":"exact"},{"name":"increased transcription from telomere during G0","type":"exact"}],"termid":"FYPO:0007421"}


id: GO:0014832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract.","definition_xrefs":["PMID:18276178","PMID:538956","PMID:11768524","GOC:mtg_muscle","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"}


id: PBO:0087924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication","termid":"PBO:0087924"}


id: PBO:0091790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 5' UTR of SPBC365.16","termid":"PBO:0091790"}


id: PBO:0042305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD22 molecule","termid":"PBO:0042305"}


id: GO:1901363
data:
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id: PBO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member C1, pseudogene","termid":"PBO:0046978"}


id: PBO:0041779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 2","termid":"PBO:0041779"}


id: FYPO:0001076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal level of substance in cell","termid":"FYPO:0001076"}


id: GO:0140217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"},{"relation_name":"positively_regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of D-aspartate import across plasma membrane","termid":"GO:0140217"}


id: PBO:0062145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 15","termid":"PBO:0062145"}


id: PBO:0080633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 1","termid":"PBO:0080633"}


id: PATO:0001965
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being bent down upon their stalk.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reclinate","termid":"PATO:0001965"}


id: GO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate + L-cysteine + L-valine + 3 ATP + H2O = N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 AMP + 3 diphosphate + 6 H+.","definition_xrefs":["EC:6.3.2.26","RHEA:23196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase activity","secondary_identifiers":["MetaCyc:6.3.2.26-RXN","KEGG_REACTION:R04870"],"synonyms":[{"name":"ACV synthetase activity","type":"broad"},{"name":"L-2-aminohexanedioate:L-cysteine:L-valine ligase (AMP-forming, valine-inverting)","type":"related"},{"name":"L-alpha-aminoadipyl-cysteinyl-valine synthetase activity","type":"related"},{"name":"L-delta-(alpha-aminoadipoyl)-L-cysteinyl-D-valine synthetase activity","type":"related"}],"termid":"GO:0050564"}


id: GO:0140498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex with alpha-(1->6)-mannosyltransferase activity, located in the cis Golgi membrane; adds mannan to N-linked glycans on proteins as part of the priming and elongation of alpha 1,6-linked Man backbone. In S. cerevisiae, contains Mnn9p and Van1p.","definition_xrefs":["PMID:9430634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan polymerase complex","termid":"GO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794","GO:0032991"],"is_obsolete":false,"name":"mannan polymerase I complex","termid":"GO:0140498"}


id: _global:contributes_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"_global:capable_of_part_of"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"part_of_structure_that_is_capable_of","termid":"_global:part_of_structure_that_is_capable_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","secondary_identifiers":["RO:0002326"],"termid":"_global:contributes_to"}


id: PBO:0027654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027654"}


id: GO:0032267
data:
  {"annotated_genes":["SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84497],"is_not":false,"summary":null,"term":"GO:0032267"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of lysine onto the cytidine residue present at the wobble position (usually position 34) of an AUA-specific isoleucine tRNA, to form the derivative lysidine. This modification converts both the codon specificity of tRNA(Ile) from AUG to AUA and its amino acid specificity from methionine to isoleucine.","definition_xrefs":["PMID:14527414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0140098","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.4.-"],"synonyms":[{"name":"tRNA(Ile)-2-lysyl-cytidine synthase activity","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase activity","type":"exact"}],"termid":"GO:0032267","terms_by_termid":{"GO:0032267":null}}


id: FYPO:0005304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through interphase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic interphase","synonyms":[{"name":"decreased rate of mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression during vegetative growth","type":"related"},{"name":"increased duration of interphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic interphase during vegetative growth","type":"exact"},{"name":"prolonged mitotic interphase","type":"exact"},{"name":"reduced rate of mitotic interphase progression","type":"related"}],"termid":"FYPO:0005304"}


id: GO:1901770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of daunorubicin.","definition_xrefs":["PMID:7601857","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"daunorubicin catabolic process","synonyms":[{"name":"daunorubicin breakdown","type":"exact"},{"name":"daunorubicin catabolism","type":"exact"},{"name":"daunorubicin degradation","type":"exact"}],"termid":"GO:1901770"}


id: PBO:0065822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C antisense RNA 1","termid":"PBO:0065822"}


id: FYPO:0005663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle is abnormal after arrest resulting from heat shock.","definition_xrefs":["PomBase:mah","PMID:19546237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to heat","termid":"FYPO:0000212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal re-entry into mitotic cell cycle after arrest in response to heat shock","synonyms":[{"name":"abnormal re-entry into mitotic cell cycle after arrest in response to heat shock during vegetative growth","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after heat shock arrest","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after heat shock-induced arrest","type":"exact"}],"termid":"FYPO:0005663"}


id: GO:0044290
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space bounded by the mitochondrial cristae membranes, continuous with the intermembrane space.","definition_xrefs":["NIF_Subcellular:sao508958414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrion","termid":"GO:0005739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial intracristal space","termid":"GO:0044290"}


id: GO:0022010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment in central nervous system","termid":"GO:0032291"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"oligodendrocyte development","termid":"GO:0014003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system myelination","synonyms":[{"name":"myelination in central nervous system","type":"exact"}],"termid":"GO:0022010"}


id: FYPO:0005984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to the dye Congo Red. Cells stop growing (and may die) at a concentration of Congo Red that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to Congo Red","synonyms":[{"name":"hypersensitive to Congo Red","type":"exact"},{"name":"sensitive to Congo Red during mitotic cell cycle","type":"related"},{"name":"sensitive to Congo Red during vegetative growth","type":"exact"}],"termid":"FYPO:0005984"}


id: GO:1901195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"positively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"positive regulation of formation of translation preinitiation complex","synonyms":[{"name":"activation of formation of translation pre-initiation complex","type":"exact"},{"name":"activation of formation of translation preinitiation complex","type":"narrow"},{"name":"activation of translation preinitiation complex assembly","type":"exact"},{"name":"positive regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"positive regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"upregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"upregulation of formation of translation preinitiation complex","type":"exact"},{"name":"upregulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901195"}


id: PBO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 2 pseudogene 1","termid":"PBO:0043579"}


id: PBO:0084631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase for rRNA; methylates pseudouridine 18S rRNA residue 1191; member of the SPOUT methyltransferase family; required for maturation of 18S rRNA and for 40S ribosomal subunit production independent of methyltransferase activity; forms homodimers; human ortholog is mutated in Bowen-Conradi syndrome, and equivalent yeast mutation affects Emg1p dimerization and localization but not methyltransferase activity; human EMG1 complements lethality of null and ts mutant","termid":"PBO:0084631"}


id: GO:1903151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any carbohydrate transmembrane transporter activity that is involved in carbohydrate import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GO_REF:0000061","GOC:TermGenie","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete carbohydrate transmembrane transporter activity involved in carbohydrate import into cell (obsolete GO:1903151)","synonyms":[{"name":"carbohydrate transmembrane transporter activity involved in carbohydrate import into cell","type":"exact"},{"name":"sugar transporter involved in carbohydrate import into cell","type":"narrow"}],"termid":"GO:1903151"}


id: GO:0102448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = ombuin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rhamnetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13934"],"termid":"GO:0102448"}


id: PBO:0005193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone (predicted)","termid":"PBO:0005193"}


id: SO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operation that can be applied to a sequence, that results in a change.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000041 sequence_operation (obsolete SO:0000041)","synonyms":[{"name":"sequence operation","type":"exact"}],"termid":"SO:0000041"}


id: FYPO:0007603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microfilament motor activity","termid":"FYPO:0006093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased microfilament motor activity","synonyms":[{"name":"decreased actin filament motor activity","type":"exact"},{"name":"decreased microfilament motor (ATPase) activity","type":"exact"},{"name":"decreased myosin ATPase activity","type":"related"},{"name":"reduced microfilament motor activity","type":"exact"}],"termid":"FYPO:0007603"}


id: FYPO:0005232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a protein complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the protein complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal protein complex binding","termid":"FYPO:0005232"}


id: MOD:01256
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to 3-methyl-S-(2-sulfanylethyl)cysteine.","definition_xrefs":["PubMed:11507762","Unimod:200#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-ethanedithiol modified residue","termid":"MOD:00553"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-S-(2-sulfanylethyl)cysteine (Thr)","synonyms":[{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"},{"name":"beta-methyl-S-(2-mercaptoethyl)cysteine","type":"exact"}],"termid":"MOD:01256"}


id: GO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The identification of lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests the repair complex recognizes distortions in the DNA helix.","definition_xrefs":["PMID:10197977","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA damage recognition","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"related"}],"termid":"GO:0000715"}


id: GO:0000274
data:
  {"annotated_genes":["SJAG_00133","SJAG_00836","SJAG_03925"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99828,103989,112005],"is_not":false,"summary":null,"term":"GO:0000274"}]},"cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the mitochondrial membrane-associated F0 proteins; is thought to prevent futile rotation of the catalytic core.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, stator stalk","termid":"GO:0045265"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0000276"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00836":null,"SJAG_03925":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase, stator stalk","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial proton-transporting ATP synthase, peripheral stalk","type":"exact"}],"termid":"GO:0000274","terms_by_termid":{"GO:0000274":null}}


id: GO:1900347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methanethiol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methanethiol","termid":"GO:1900345"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methanethiol","synonyms":[{"name":"activation of methane biosynthetic process from methanethiol","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methanethiol","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methanethiol","type":"exact"},{"name":"upregulation of methane biosynthetic process from methanethiol","type":"exact"}],"termid":"GO:1900347"}


id: GO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Leu-Xaa bond in angiotensinogen to generate angiotensin I.","definition_xrefs":["EC:3.4.23.15"],"gene_count":0,"genotype_count":0,"name":"obsolete renin activity (obsolete GO:0004195)","synonyms":[{"name":"angiotensin-forming enzyme activity","type":"related"},{"name":"angiotensinogenase activity","type":"related"},{"name":"renin activity","type":"exact"}],"termid":"GO:0004195"}


id: GO:0097027
data:
  {"annotated_genes":["SJAG_01051","SJAG_03858","SJAG_03809","SJAG_04853","SJAG_00071","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113296],"is_not":false,"summary":null,"term":"GO:0097027"},{"annotations":[98462,84913,85165,111110,96301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990757"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ubiquitin-protein transferase.","definition_xrefs":["PMID:18321851","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ubiquitin-protein transferase regulator activity","termid":"GO:0055106"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01051":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-protein transferase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097027","terms_by_termid":{"GO:0097027":null,"GO:1990757":null}}


id: GO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of hydrogen ions are received and are converted to a molecular signal by chemoreceptors.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hydrogen ion","termid":"GO:0003030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pH by chemoreceptor signaling","synonyms":[{"name":"detection of pH by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003022"}


id: PBO:0088029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB family mitochondrial protein; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; contains transmembrane domain and mitochondrial targeting sequence","termid":"PBO:0088029"}


id: PBO:0059212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRM3 pseudogene 1","termid":"PBO:0059212"}


id: PBO:0003737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Pfa3 (predicted)","termid":"PBO:0003737"}


id: PBO:0065414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 3","termid":"PBO:0065414"}


id: PBO:0086014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP fusion protein localizes to endoplasmic reticulum (ER) while mCherry fusion localizes to both ER and vacuole","termid":"PBO:0086014"}


id: PBO:0027872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylated_histone_binding","termid":"PBO:0027872"}


id: PBO:0086445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosidase; essential glycosylphosphatidylinositol (GPI)-anchored membrane protein required for cell wall biogenesis in bud formation, involved in filamentous growth, homologous to Dcw1p","termid":"PBO:0086445"}


id: PBO:0078862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 10","termid":"PBO:0078862"}


id: PATO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown green","synonyms":[{"name":"olive green","type":"exact"}],"termid":"PATO:0001942"}


id: SO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 18S rRNA is an RNA component of the small subunit of cytosolic ribosomes in eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_18S_gene","termid":"SO:0002236"},{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA","termid":"SO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_18S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/18S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 18S rRNA","type":"exact"},{"name":"cytosolic 18S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 18S","type":"exact"}],"termid":"SO:0000407"}


id: GO:0141046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of an Atg8 family modifer from one protein to a phosphatidylethanolamine or phosphatidylserine on a membrane, via the reaction X-Atg8 + Y = Y-Atg8 + X.","definition_xrefs":["PMID:11100732","PMID:28234446","PMID:17986448","PMID:33909989","PMID:18704115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0019787","GO:0016746","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Atg8-family conjugating enzyme activity","synonyms":[{"name":"APG8 conjugating enzyme activity","type":"exact"},{"name":"Atg8 conjugating enzyme activity","type":"narrow"},{"name":"Atg8-like conjugating activity","type":"exact"},{"name":"E2","type":"broad"}],"termid":"GO:0141046"}


id: PBO:0087765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p); TORC2 is a membrane-associated complex that regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; involved in sphingolipid metabolism; contains a RasGEFN domain","termid":"PBO:0087765"}


id: PBO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein iron-sulfur cluster assembly protein Nfu1 (predicted)","termid":"PBO:0016999"}


id: PBO:0057316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518c","termid":"PBO:0057316"}


id: GO:0052028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts a signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host signal transduction pathway","secondary_identifiers":["GO:0044502","GO:0052526"],"synonyms":[{"name":"activation by symbiont of host signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of host signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"positive regulation of signal transduction in other organism","type":"broad"},{"name":"stimulation by symbiont of host signal transduction pathway","type":"narrow"},{"name":"up regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"up-regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"upregulation by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052028"}


id: PBO:0077297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM38B pseudogene 1","termid":"PBO:0077297"}


id: GO:0160054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of microfibril.","definition_xrefs":["PMID:32855533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"microfibril assembly","termid":"GO:0160054"}


id: PBO:0004564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2 (predicted)","termid":"PBO:0004564"}


id: GO:0071657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granulocyte colony-stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte colony-stimulating factor production","termid":"GO:0071655"},{"relation_name":"is_a","term_name":"positive regulation of macrophage colony-stimulating factor production","termid":"GO:1901258"},{"relation_name":"positively_regulates","term_name":"granulocyte colony-stimulating factor production","termid":"GO:0071611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granulocyte colony-stimulating factor production","synonyms":[{"name":"positive regulation of CSF3 production","type":"exact"},{"name":"positive regulation of G-CSF production","type":"exact"},{"name":"positive regulation of colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"positive regulation of filgrastim production","type":"exact"},{"name":"positive regulation of granulocyte colony stimulating factor production","type":"exact"},{"name":"positive regulation of lenograstim production","type":"exact"},{"name":"positive regulation of pluripoietin production","type":"exact"}],"termid":"GO:0071657"}


id: PBO:0078288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 21-1","termid":"PBO:0078288"}


id: PBO:0074674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59A","termid":"PBO:0074674"}


id: PBO:0055848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich melanocyte differentiation associated","termid":"PBO:0055848"}


id: GO:0140043
data:
  {"annotated_genes":["SJAG_02736","SJAG_00405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99096,113085],"is_not":false,"summary":null,"term":"GO:0140043"}]},"cv_name":"biological_process","definition":"Any process in which a lipid droplet is transported to, or maintained to the prospore membrane leading edge.","definition_xrefs":["PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid localization","termid":"GO:0010876"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_02736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipid droplet localization to prospore membrane leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adiposome localization to FSM membrane leading edge","type":"exact"},{"name":"adiposome localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"adiposome localization to forespore membrane leading edge","type":"related"},{"name":"lipid body localization to FSM membrane leading edge","type":"exact"},{"name":"lipid body localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"lipid body localization to forespore membrane leading edge","type":"related"},{"name":"lipid particle localization to FSM membrane leading edge","type":"exact"},{"name":"lipid particle localization to ascospore-type prospore membrane leading edge","type":"exact"},{"name":"lipid particle localization to forespore membrane leading edge","type":"related"}],"termid":"GO:0140043","terms_by_termid":{"GO:0140043":null}}


id: PBO:0001371
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates isa1","termid":"PBO:0001371"}


id: GO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephros development","termid":"GO:0072216"}


id: PBO:0073839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A14 antisense RNA 1","termid":"PBO:0073839"}


id: PBO:0042391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300LD antisense RNA 1","termid":"PBO:0042391"}


id: GO:1901269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipooligosaccharide.","definition_xrefs":["UniPathway:UPA00501","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide metabolic process","synonyms":[{"name":"lipooligosaccharide metabolism","type":"exact"}],"termid":"GO:1901269"}


id: PBO:0064687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 23","termid":"PBO:0064687"}


id: GO:0010595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell migration","termid":"GO:0010634"},{"relation_name":"positively_regulates","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell migration","termid":"GO:0010595"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: GO:0014006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglia differentiation","synonyms":[{"name":"regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014006"}


id: GO:0061553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion maturation","synonyms":[{"name":"ganglia maturation","type":"related"}],"termid":"GO:0061553"}


id: GO:0016562
data:
  {"annotated_genes":["SJAG_02619","SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97471,113448],"is_not":false,"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The process in which peroxisome targeting sequence receptors dissociates from cargo proteins and are returned to the cytosol.","definition_xrefs":["PMID:11687502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"protein import into peroxisome matrix","termid":"GO:0016558"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02619":null,"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0007031"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0007031"],"is_obsolete":false,"name":"protein import into peroxisome matrix, receptor recycling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PTS receptor recycling","type":"related"},{"name":"peroxisome matrix protein import, receptor recycling","type":"exact"},{"name":"peroxisome receptor recycling","type":"related"},{"name":"protein transport into peroxisome matrix, receptor recycling","type":"exact"},{"name":"receptor recycling during peroxisome matrix protein import","type":"exact"},{"name":"receptor recycling during protein import into peroxisome matrix","type":"exact"},{"name":"receptor recycling during protein transport into peroxisome matrix","type":"exact"}],"termid":"GO:0016562","terms_by_termid":{"GO:0016562":null}}


id: PBO:0062936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 2","termid":"PBO:0062936"}


id: GO:0007279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a small group of cells (pole cells) at the posterior pole of the insect blastula. They are the first cells to cellularize after the arrival of nuclei at the end of the syncytial blastula stage and are the precursors to the insect germ cells.","definition_xrefs":["GOC:bf","PMID:9988212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"part_of","term_name":"pole cell development","termid":"GO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pole cell formation","termid":"GO:0007279"}


id: GO:0034355
data:
  {"annotated_genes":["SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85234],"is_not":false,"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"Any process that generates nicotinamide adenine dinucleotide (NAD) from derivatives of it, without de novo synthesis; salvage is usually from the degradation products nicotinic acid (Na) and nicotinamide (Nam).","definition_xrefs":["PMID:12648681","GOC:mah","PMID:27374990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD biosynthetic process","termid":"GO:0009435"},{"relation_name":"is_a","term_name":"pyridine nucleotide salvage","termid":"GO:0019365"},{"relation_name":"is_a","term_name":"purine nucleotide salvage","termid":"GO:0032261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"NAD salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD salvage pathway","type":"exact"}],"termid":"GO:0034355","terms_by_termid":{"GO:0034355":null}}


id: PBO:0082948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic malate dehydrogenase; one of three isozymes that catalyze interconversion of malate and oxaloacetate; involved in the glyoxylate cycle and gluconeogenesis during growth on two-carbon compounds; interacts with Pck1p and Fbp1; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0082948"}


id: GO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"regulation of lateral mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048374"}


id: PBO:0027235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_silent_mating-type_cassette","termid":"PBO:0027235"}


id: MOD:01918
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to (2S,5S)-5-hydroxylysine.","definition_xrefs":["RESID:AA0578","PubMed:19574390","PubMed:22238144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,5S)-5-hydroxylysine","synonyms":[{"name":"(2S,5S)-2,6-diamino-5-hydroxyhexanoic acid","type":"exact"},{"name":"(2S,5S)-5-hydroxylysine","type":"exact"},{"name":"2,6-bisazanyl-5-hydroxyhexanoic acid","type":"exact"},{"name":"2,6-diamino-2,3,4,6-tetradeoxyhexonic acid","type":"exact"},{"name":"L-allo-delta-hydroxylysine","type":"exact"},{"name":"L-threo-delta-hydroxylysine","type":"exact"},{"name":"MOD_RES (5S)-5-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta-hydroxycaproic acid","type":"exact"}],"termid":"MOD:01918"}


id: PBO:0004223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase","termid":"PBO:0004223"}


id: PBO:0029963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hydrogen_ion_transporting_ATP_synthase_activity,_rotational_mechanism","termid":"PBO:0029963"}


id: GO:0043416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"}


id: PBO:0042743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Q","termid":"PBO:0042743"}


id: PR:Q9UUH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.07c gene.","definition_xrefs":["UniProtKB:Q9UUH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.07c","synonyms":[{"name":"Spom972h-SPAC630.07c","type":"exact"}],"termid":"PR:Q9UUH5"}


id: PBO:0048840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine N-methyltransferase","termid":"PBO:0048840"}


id: GO:1900273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic potentiation","termid":"GO:1900271"},{"relation_name":"positively_regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term synaptic potentiation","synonyms":[{"name":"activation of LTP","type":"related"},{"name":"activation of long-term potentiation","type":"broad"},{"name":"activation of long-term synaptic potentiation","type":"narrow"},{"name":"positive regulation of LTP","type":"related"},{"name":"positive regulation of long-term potentiation","type":"broad"},{"name":"up regulation of LTP","type":"related"},{"name":"up regulation of long-term potentiation","type":"broad"},{"name":"up regulation of long-term synaptic potentiation","type":"exact"},{"name":"up-regulation of LTP","type":"related"},{"name":"up-regulation of long-term potentiation","type":"broad"},{"name":"up-regulation of long-term synaptic potentiation","type":"exact"},{"name":"upregulation of LTP","type":"related"},{"name":"upregulation of long-term potentiation","type":"broad"},{"name":"upregulation of long-term synaptic potentiation","type":"exact"}],"termid":"GO:1900273"}


id: PBO:0044275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 16","termid":"PBO:0044275"}


id: PBO:0034700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading factor (adherin) Mis4","termid":"PBO:0034700"}


id: SO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that has been implicated in binding although the exact coordinates of binding may be unknown.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimentally_defined_binding_region","synonyms":[{"name":"experimentally defined binding region","type":"related"}],"termid":"SO:0001696"}


id: PBO:0076442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 1","termid":"PBO:0076442"}


id: FYPO:0007146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished, and the protein is present in the cytoplasm instead, during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during meiotic cell cycle","synonyms":[{"name":"abolished protein localization in nucleus, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"exact"},{"name":"nuclear exclusion, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"related"},{"name":"nuclear protein exclusion, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"related"},{"name":"protein localization to nucleus abolished, with protein mislocalized to cytoplasm, during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007146"}


id: GO:0099577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating translation occurring at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"regulation of translation at synapse, modulating synaptic transmission","termid":"GO:0099547"},{"relation_name":"is_a","term_name":"regulation of translation at presynapse","termid":"GO:0140244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0023052"],"is_obsolete":false,"name":"regulation of translation at presynapse, modulating synaptic transmission","termid":"GO:0099577"}


id: PBO:0013119
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that suppresses Calcineurin deletion","termid":"PBO:0013119"}


id: PBO:0083272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 96% of ORF overlaps the verified gene RPC53; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083272"}


id: GO:0035115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"forelimb morphogenesis","termid":"GO:0035136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic forelimb morphogenesis","secondary_identifiers":["GO:0035117"],"synonyms":[{"name":"embryonic arm morphogenesis","type":"narrow"}],"termid":"GO:0035115"}


id: PBO:0039137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense of IGF2R non-protein coding RNA","termid":"PBO:0039137"}


id: PBO:0073178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K","termid":"PBO:0073178"}


id: GO:1905514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:15470145","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of short-term synaptic potentiation","termid":"GO:1905512"},{"relation_name":"positively_regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of short-term synaptic potentiation","synonyms":[{"name":"activation of short-term synaptic potentiation","type":"narrow"},{"name":"activation of synaptic facilitation","type":"narrow"},{"name":"positive regulation of synaptic facilitation","type":"exact"},{"name":"up regulation of short-term synaptic potentiation","type":"exact"},{"name":"up regulation of synaptic facilitation","type":"exact"},{"name":"up-regulation of short-term synaptic potentiation","type":"exact"},{"name":"up-regulation of synaptic facilitation","type":"exact"},{"name":"upregulation of short-term synaptic potentiation","type":"exact"},{"name":"upregulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905514"}


id: GO:1902513
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of organelle transport along microtubule.","definition_xrefs":["PMID:21147087","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of organelle transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule-based organelle localization","type":"exact"}],"termid":"GO:1902513","terms_by_termid":{"GO:1902854":null}}


id: FYPO:0004561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of BE49385A (a GPI synthesis inhibitor, also called YW3548) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to BE49385A","synonyms":[{"name":"resistance to BE49385A during mitotic cell cycle","type":"related"},{"name":"resistance to BE49385A during vegetative growth","type":"exact"},{"name":"resistance to YW3548","type":"exact"},{"name":"resistant to BE49385A","type":"exact"}],"termid":"FYPO:0004561"}


id: PBO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding 1","termid":"PBO:0043123"}


id: GO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior Malpighian tubule over time, from its formation to the mature structure. The pair of anterior tubules arise from a dorsal region of the embryonic hindgut and projects forwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior Malpighian tubule development","termid":"GO:0061327"}


id: GO:0045915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"positively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catecholamine metabolic process","synonyms":[{"name":"activation of catecholamine metabolic process","type":"narrow"},{"name":"positive regulation of catecholamine metabolism","type":"exact"},{"name":"stimulation of catecholamine metabolic process","type":"narrow"},{"name":"up regulation of catecholamine metabolic process","type":"exact"},{"name":"up-regulation of catecholamine metabolic process","type":"exact"},{"name":"upregulation of catecholamine metabolic process","type":"exact"}],"termid":"GO:0045915"}


id: PBO:0087775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of UAF (upstream activation factor) complex; UAF is an RNA polymerase I specific transcription stimulatory factor composed of Uaf30p, Rrn5p, Rrn9p, Rrn10p, histones H3 and H4; targeting factor for the UAF that facilitates activation of many rDNA genes; deletion decreases cellular growth rate; UAF30 has a paralog, TRI1, that arose from the whole genome duplication","termid":"PBO:0087775"}


id: GO:0047421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-glutamate + H2O = D-glutamate + a carboxylate.","definition_xrefs":["EC:3.5.1.82","RHEA:12833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acyl-D-glutamate deacylase activity","secondary_identifiers":["KEGG_REACTION:R01581","MetaCyc:3.5.1.82-RXN"],"synonyms":[{"name":"N-acyl-D-glutamate amidohydrolase activity","type":"related"}],"termid":"GO:0047421"}


id: GO:1903857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["PMID:25535363","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of cytokinin dehydrogenase activity","termid":"GO:1903856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokinin dehydrogenase activity","synonyms":[{"name":"down regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down regulation of cytokinin oxidase activity","type":"related"},{"name":"down-regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down-regulation of cytokinin oxidase activity","type":"related"},{"name":"downregulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"downregulation of cytokinin oxidase activity","type":"related"},{"name":"inhibition of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of cytokinin dehydrogenase activity","type":"narrow"},{"name":"inhibition of cytokinin oxidase activity","type":"related"},{"name":"negative regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903857"}


id: PBO:0047493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 1","termid":"PBO:0047493"}


id: PBO:0040007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 15","termid":"PBO:0040007"}


id: PBO:0109547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit Csc2","termid":"PBO:0109547"}


id: GO:0000479
data:
  {"annotated_genes":["SJAG_00897","SJAG_02547","SJAG_00344","SJAG_03425","SJAG_02644","SJAG_02374","SJAG_04524","SJAG_03952","SJAG_03796","SJAG_02553","SJAG_06613","SJAG_04174","SJAG_00955","SJAG_01623","SJAG_03846","SJAG_01581","SJAG_02250","SJAG_01476","SJAG_00965","SJAG_04224","SJAG_00772","SJAG_03789","SJAG_04916","SJAG_02275","SJAG_04582","SJAG_01551","SJAG_03234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84578,90505,104886],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[114682,100288,87873,91133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[111359,95975,103799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[92678,101826,105189,109672,111466,103800,114716,89595,101733,90884,111550,99299,104129,92968,95654,95976,100725,101825,100941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[101734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[111360,95977,103801,105190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000479","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000461":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null}}


id: SO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA sequences that are untranslated and lie five prime or three prime to sequences which are translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR","synonyms":[{"name":"untranslated region","type":"exact"}],"termid":"SO:0000203"}


id: FYPO:0005192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to nitrogen starvation","synonyms":[{"name":"normal cellular response to nitrogen depletion","type":"exact"},{"name":"normal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005192"}


id: PBO:0076990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 6","termid":"PBO:0076990"}


id: GO:0060708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell of the ectoplacental cone acquires specialized features of a spongiotrophoblast of the placenta. A spongiotrophoblast cell is a basophilic cell.","definition_xrefs":["GOC:dph","PMID:16269175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast differentiation","synonyms":[{"name":"spongiotrophoblast cell differentiation","type":"exact"}],"termid":"GO:0060708"}


id: PBO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.12","termid":"PBO:0005061"}


id: GO:0080148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to water deprivation. Response to water deprivation is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.","definition_xrefs":["PMID:18835996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"negatively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to water deprivation","termid":"GO:0080148"}


id: PBO:0046047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit E","termid":"PBO:0046047"}


id: GO:0072234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric nephron tubule over time, from its initial formation to the mature structure. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"metanephric tubule development","termid":"GO:0072170"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule development","termid":"GO:0072234"}


id: MOD:00556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +94","synonyms":[{"name":"Acrolein addition +94","type":"related"},{"name":"Delta:H(6)C(6)O(1)","type":"related"}],"termid":"MOD:00556"}


id: PBO:0040688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast carcinoma amplified sequence 4","termid":"PBO:0040688"}


id: GO:0046029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-mannose + H+ + NADH.","definition_xrefs":["EC:1.1.1.255","RHEA:15029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mannitol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.255-RXN","KEGG_REACTION:R07135"],"synonyms":[{"name":"MTD activity","type":"related"},{"name":"NAD-dependent mannitol dehydrogenase activity","type":"broad"},{"name":"mannitol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0046029"}


id: PBO:0004568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' DNA helicase, involved in DNA recombination and repair Pif1","termid":"PBO:0004568"}


id: FYPO:0005634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister kinetochores become separated during the first meiotic nuclear division, and sister chromatids subsequently separate to result in equational segregation. Equational sister chromatid separation is caused by  bi-orientated attachment of sister chromatids.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I","termid":"FYPO:0005648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I with  equational sister chromatid  segregation in meiosis I","synonyms":[{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation and equational sister chromatid separation","type":"exact"},{"name":"abolished monopolar kinetochore attachment during meiosis I","type":"related"},{"name":"equational sister chromatid separation during first meiotic nuclear division","type":"exact"},{"name":"equational sister chromatid separation during meiosis I with split kinetochores","type":"related"},{"name":"equational sister chromatid separation in meiosis I","type":"exact"},{"name":"increased bi-orientated attachment of sister chromatids in meiosis I","type":"related"}],"termid":"FYPO:0005634"}


id: GO:0102232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acrolein + NADPH + H+ = propanal + NADP.","definition_xrefs":["PMID:21169366","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acrolein reductase activity","secondary_identifiers":["MetaCyc:RXN-12281"],"termid":"GO:0102232"}


id: MOD:00726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a glucose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"glucosylated","synonyms":[{"name":"Glc","type":"exact"}],"termid":"MOD:00726"}


id: PBO:0051828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 3","termid":"PBO:0051828"}


id: GO:2001164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001164)","termid":"GO:2001164"}


id: PBO:0073758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 12","termid":"PBO:0073758"}


id: PBO:0031133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_nitrogen_starvation","termid":"PBO:0031133"}


id: FYPO:0006066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more alpha/beta tubulin heterodimers does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished tubulin heterodimer binding","synonyms":[{"name":"abolished protein-protein interaction with tubulin dimer","type":"exact"},{"name":"abolished protein-protein interaction with tubulin heterodimer","type":"exact"},{"name":"abolished tubulin dimer binding","type":"exact"},{"name":"tubulin heterodimer binding abolished","type":"exact"}],"termid":"FYPO:0006066"}


id: PBO:0053164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor adaptor protein 1","termid":"PBO:0053164"}


id: PBO:0038797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3A (pseudogene)","termid":"PBO:0038797"}


id: PR:O74855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A notchless protein homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04884","PRO:DNx","PANTHER:PTHR19848:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.05c","secondary_identifiers":["UniProtKB:O74855"],"synonyms":[{"name":"Spom972h-NLE1","type":"exact"},{"name":"notchless protein homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosome biogenesis factor rsa4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74855"}


id: PBO:0078475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRHDE antisense RNA 1","termid":"PBO:0078475"}


id: GO:0110100
data:
  {"annotated_genes":["SJAG_00773","SJAG_04745","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140456"},{"annotations":[74727,90945,91488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane. Duplicated SPBs are connected by a bridge structure that is severed in order to release the SPBs from one another. Following liberation, SPBs diffuse through the nuclear membrane until they are across from each other. SPB separation must take place in order for a bipolar spindle to assemble.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110100","terms_by_termid":{"GO:0000073":null,"GO:0140456":null}}


id: MOD:00340
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-amidino-L-cysteine.","definition_xrefs":["RESID:AA0335","PubMed:9148748","Unimod:440#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-amidino-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(carbamimidoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-amidinosulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-amidinothiopropanoic acid","type":"exact"},{"name":"ACT_SITE Amidino-cysteine intermediate","type":"exact"},{"name":"Amidino","type":"related"},{"name":"S-amidino-L-cysteine","type":"exact"},{"name":"S-amidinocysteine","type":"exact"},{"name":"alpha-amino-beta-amidinothiopropionic acid","type":"exact"},{"name":"amidino","type":"related"},{"name":"beta-(S-isothiourea)alanine","type":"exact"},{"name":"beta-amidinothioalanine","type":"exact"}],"termid":"MOD:00340"}


id: PBO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 3 pseudogene","termid":"PBO:0042628"}


id: PBO:0030325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization","termid":"PBO:0030325"}


id: GO:0098759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-8","termid":"GO:0098758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-8","synonyms":[{"name":"cellular response to IL-8","type":"exact"}],"termid":"GO:0098759"}


id: FYPO:0007974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization occurs at a higher rate, or speed, than normal for microtubules with their plus ends inside the nuclear membrane bridge formed during mitotic anaphase B.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of interpolar microtubule polymerization inside the mitotic nuclear membrane bridge","termid":"FYPO:0007974"}


id: GO:0043516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"regulation of p53 induced by DNA damage response","type":"exact"}],"termid":"GO:0043516"}


id: GO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to RNA, typically within the nascent RNA transcript, to promote readthrough of a transcription termination site and thus extending the length of the RNA transcript produced. Examples of antitermination factors which bind the nascent RNA include the lambda N protein and the HIV-1 tat protein.","definition_xrefs":["PMID:8332211","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"transcription antitermination factor activity, RNA binding","synonyms":[{"name":"RNA binding transcription antitermination factor activity","type":"exact"}],"termid":"GO:0001072"}


id: PBO:0027673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_ascospore_release_from_ascus","termid":"PBO:0027673"}


id: GO:2000271
data:
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id: PBO:0084191
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id: FYPO:0004394
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id: GO:0106055
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id: GO:0098681
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id: PBO:0069663
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id: PR:000050584
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id: PBO:0067490
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id: FYPO:0001897
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id: GO:0016772
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id: MOD:01613
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-diiodo-L-tyrosine.","definition_xrefs":["ChEBI:15768","RESID:AA0510","PubMed:8995307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diiodinated tyrosine","termid":"MOD:01140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-diiodo-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-hydroxy-3,5-diiodophenyl)propanoic acid","type":"exact"},{"name":"3',5'-diiodo-L-tyrosine","type":"exact"},{"name":"3,5-diiodo-L-tyrosine","type":"exact"},{"name":"3,5-diiodotyrosine","type":"exact"},{"name":"DIT","type":"exact"},{"name":"MOD_RES Diiodotyrosine","type":"exact"},{"name":"iodogorgoic acid","type":"exact"}],"termid":"MOD:01613"}


id: PBO:0055653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3093","termid":"PBO:0055653"}


id: PR:O14078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.13c gene.","definition_xrefs":["UniProtKB:O14078","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.13c","synonyms":[{"name":"OLA1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPACUNK4.13c","type":"exact"}],"termid":"PR:O14078"}


id: PBO:0036543
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic primordial dwarfism","termid":"PBO:0036543"}


id: GO:0034538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylsalicylaldehyde + NAD+ = 3-methylsalicylate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-methylsalicylaldehyde dehydrogenase activity","termid":"GO:0034538"}


id: PBO:0065197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 18","termid":"PBO:0065197"}


id: PBO:0029475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029475"}


id: PBO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pre-replicative_complex_assembly","termid":"PBO:0031450"}


id: GO:0019521
data:
  {"annotated_genes":["SJAG_03852","SJAG_00633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94361,107755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-gluconate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-gluconate metabolism","type":"exact"}],"termid":"GO:0019521","terms_by_termid":{"GO:0046177":null}}


id: FYPO:0000826
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"},{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: decreased","type":"related"},{"name":"decreased RNA accumulation","type":"related"},{"name":"decreased cellular RNA level","type":"exact"},{"name":"decreased cellular mRNA level","type":"narrow"},{"name":"decreased transcript level","type":"exact"},{"name":"reduced RNA level","type":"exact"}],"termid":"FYPO:0000826","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: _global:gained
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X gained Y if X is a variant_of X' and Y part of X but not X'.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gained","termid":"_global:gained"}


id: PATO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fertile","termid":"PATO:0000955"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fertility","synonyms":[{"name":"high fertility","type":"exact"}],"termid":"PATO:0001835"}


id: GO:0098767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis II.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis II M phase (obsolete GO:0098767)","termid":"GO:0098767"}


id: PBO:0029134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell","termid":"PBO:0029134"}


id: _global:has_ratio_quality
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ratio_quality","termid":"_global:has_ratio_quality"}


id: GO:0120321
data:
  {"annotated_genes":["SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115648],"is_not":false,"summary":null,"term":"GO:0120321"}]},"cv_name":"cellular_component","definition":"The region of the nuclear envelope situated in close proximity to a nuclear pore complex.","definition_xrefs":["PMID:24184107","GOC:mah","PMID:21802294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear envelope adjacent to nuclear pore complex","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null},"synonyms":[{"name":"associated with the nuclear pore","type":"related"},{"name":"nuclear envelope adjacent to NPC","type":"exact"},{"name":"nuclear envelope periphery of the nuclear pore complex","type":"exact"}],"termid":"GO:0120321","terms_by_termid":{"GO:0120321":null}}


id: PBO:0027361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_echinocandin","termid":"PBO:0027361"}


id: GO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Saccharomyces) (obsolete GO:0007245)","synonyms":[{"name":"activation of MAPKKK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007245"}


id: PBO:0080139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VASH1 divergent transcript","termid":"PBO:0080139"}


id: GO:0006686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin metabolic process","termid":"GO:0006684"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingomyelin biosynthetic process","synonyms":[{"name":"sphingomyelin anabolism","type":"exact"},{"name":"sphingomyelin biosynthesis","type":"exact"},{"name":"sphingomyelin formation","type":"exact"},{"name":"sphingomyelin synthesis","type":"exact"}],"termid":"GO:0006686"}


id: GO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of monocyte chemotactic protein-1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotactic protein-1 production","termid":"GO:0071637"},{"relation_name":"positively_regulates","term_name":"monocyte chemotactic protein-1 production","termid":"GO:0071605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte chemotactic protein-1 production","synonyms":[{"name":"positive regulation of CCL2 production","type":"exact"},{"name":"positive regulation of MCP-1 production","type":"exact"}],"termid":"GO:0071639"}


id: GO:0046851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone remodeling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"negatively_regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone remodeling","synonyms":[{"name":"negative regulation of bone remodelling","type":"exact"},{"name":"down regulation of bone remodeling","type":"exact"},{"name":"down-regulation of bone remodeling","type":"exact"},{"name":"downregulation of bone remodeling","type":"exact"},{"name":"inhibition of bone remodeling","type":"narrow"}],"termid":"GO:0046851"}


id: GO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"5-carbamoylmethyl uridine residue modification","synonyms":[{"name":"5-carbamoylmethyluridine metabolic process","type":"related"}],"termid":"GO:0080178"}


id: GO:0016242
data:
  {"annotated_genes":["SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102823],"is_not":false,"summary":null,"term":"GO:0016242"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"negatively_regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"negative regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of macroautophagy","type":"exact"},{"name":"down-regulation of macroautophagy","type":"exact"},{"name":"downregulation of macroautophagy","type":"exact"},{"name":"inhibition of macroautophagy","type":"narrow"},{"name":"negative regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016242","terms_by_termid":{"GO:0016242":null}}


id: PBO:0045381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 2","termid":"PBO:0045381"}


id: PBO:0091673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glycerophosphodiester transmembrane transporter","termid":"PBO:0091673"}


id: PBO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3-phosphatase, myotubularin family","termid":"PBO:0090042"}


id: PBO:0075765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 4","termid":"PBO:0075765"}


id: GO:0048216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"negatively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"negative regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"down regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"down-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"downregulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"inhibition of Golgi vesicle fusion to target membrane","type":"narrow"}],"termid":"GO:0048216"}


id: PBO:0026750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_nitrogen_starvation","termid":"PBO:0026750"}


id: PBO:0059052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX network transcriptional repressor","termid":"PBO:0059052"}


id: GO:0106279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"negatively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"negative regulation of UDP-GlcNAc biosynthesis","type":"related"},{"name":"negative regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106279"}


id: GO:0031655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of heat dissipation.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat dissipation","termid":"GO:0031654"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"heat dissipation","termid":"GO:0031653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heat dissipation","synonyms":[{"name":"down regulation of heat dissipation","type":"exact"},{"name":"down-regulation of heat dissipation","type":"exact"},{"name":"downregulation of heat dissipation","type":"exact"},{"name":"inhibition of heat dissipation","type":"narrow"}],"termid":"GO:0031655"}


id: GO:0075004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a spore of the symbiont to its host via adhesion molecules, general stickiness etc. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont spore to host","synonyms":[{"name":"adhesion of symbiont spore to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075004"}


id: FYPO:0002794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number, distribution, or morphology of all or part of the vacuole(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole","synonyms":[{"name":"abnormal vacuole physical object quality","type":"exact"},{"name":"abnormal vacuoles","type":"exact"}],"termid":"FYPO:0002794"}


id: PR:A6X978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.02","synonyms":[{"name":"Spom972h-SPAC9E9.02","type":"exact"}],"termid":"PR:A6X978"}


id: PBO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family transmembrane transporter (predicted)","termid":"PBO:0018209"}


id: PBO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031448"}


id: PBO:0030784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers_during_vegetative_growth","termid":"PBO:0030784"}


id: SO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes a C_D_box_snoRNA. Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","definition_xrefs":["PMID:22065625","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_gene","synonyms":[{"name":"box C/D snoRNA gene, C D box snoRNA gene, C/D box snoRNA gene","type":"exact"}],"termid":"SO:0002375"}


id: GO:1905020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:1665486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"regulation of aminoacyl-tRNA ligase activity","termid":"GO:1903630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methionine-tRNA ligase activity","synonyms":[{"name":"activation of L-methionine:tRNAMet ligase (AMP-forming)","type":"narrow"},{"name":"activation of MetRS activity","type":"narrow"},{"name":"activation of methionine translase activity","type":"narrow"},{"name":"activation of methionine-tRNA ligase activity","type":"narrow"},{"name":"activation of methionyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of methionyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of MetRS activity","type":"exact"},{"name":"positive regulation of methionine translase activity","type":"exact"},{"name":"positive regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up regulation of MetRS activity","type":"exact"},{"name":"up regulation of methionine translase activity","type":"exact"},{"name":"up regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of MetRS activity","type":"exact"},{"name":"up-regulation of methionine translase activity","type":"exact"},{"name":"up-regulation of methionine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"upregulation of MetRS activity","type":"exact"},{"name":"upregulation of methionine translase activity","type":"exact"},{"name":"upregulation of methionine-tRNA ligase activity","type":"exact"},{"name":"upregulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905020"}


id: PBO:0078375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells 1","termid":"PBO:0078375"}


id: FYPO:0005766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions where nucleosomes are depleted.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased replication fork pausing at nucleosome-depleted regions","synonyms":[{"name":"increased replication fork pausing at nucleosome-depleted regions during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at nucleosome-depleted regions during vegetative growth","type":"exact"}],"termid":"FYPO:0005766"}


id: GO:1901784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cresol.","definition_xrefs":["PMID:10623531","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol metabolic process","synonyms":[{"name":"p-cresol metabolism","type":"exact"}],"termid":"GO:1901784"}


id: GO:0021706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the locus ceruleus to attain its fully functional state. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"pons maturation","termid":"GO:0021586"},{"relation_name":"part_of","term_name":"locus ceruleus development","termid":"GO:0021703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus maturation","termid":"GO:0021706"}


id: PBO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 6","termid":"PBO:0050304"}


id: PBO:0077552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM258 pseudogene 2","termid":"PBO:0077552"}


id: PBO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component Ecm29","termid":"PBO:0002672"}


id: GO:0015870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"acetate ester transport","termid":"GO:1901374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acetylcholine transport","termid":"GO:0015870"}


id: PBO:0029441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_metabolic_process","termid":"PBO:0029441"}


id: PATO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000851 absolute auditory threshold (obsolete PATO:0000851)","termid":"PATO:0000851"}


id: PBO:0031637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gene_silencing","termid":"PBO:0031637"}


id: PBO:0067583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 741, pseudogene","termid":"PBO:0067583"}


id: PR:O94701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fic1 gene.","definition_xrefs":["UniProtKB:O94701","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ingression protein fic1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.18c","synonyms":[{"name":"Spom972h-fic1","type":"exact"},{"name":"cdc15-interacting C2 domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94701"}


id: FYPO:0007831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein located in the medial cortical nodes occupies an area with a smaller radius than normal during anaphase B of mitosis. The nodes are \\\"ring\\\" nodes, observed when the contractile ring is constricting.","definition_xrefs":["PomBase:mah","PMID:33496728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"narrow protein radial density distribution in medial cortical node during mitotic anaphase B","synonyms":[{"name":"decreased protein RDD in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"decreased protein radial density distribution in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"narrow protein RDD in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical R-node","type":"related"},{"name":"narrow protein radial density distribution in medial cortical node during anaphase B","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical node during mitotic anaphase B during vegetative growth","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical ring node","type":"related"},{"name":"narrow radial density distribution of protein in medial cortical node during mitotic anaphase B","type":"exact"},{"name":"reduced protein radial density distribution in medial cortical node during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007831"}


id: PBO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0030530"}


id: PR:O94642
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR11079:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase subunit tad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.10","secondary_identifiers":["UniProtKB:O94642"],"synonyms":[{"name":"SPBC16D10.10","type":"related"},{"name":"Spom972h-ADAT2","type":"exact"},{"name":"tRNA-specific adenosine-34 deaminase subunit tad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94642"}


id: GO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell that modulates the rate, frequency, or extent of the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"regulates","term_name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0007163","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of cytoskeleton polarization involved in growth plate cartilage chondrocyte division","synonyms":[{"name":"regulation of cytoskeleton polarization involved in growth plate cartilage chondrocyte division by planar cell polarity pathway","type":"exact"}],"termid":"GO:0003427"}


id: GO:0042362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin biosynthetic process","termid":"GO:0009110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"fat-soluble vitamin biosynthetic process","synonyms":[{"name":"fat-soluble vitamin anabolism","type":"exact"},{"name":"fat-soluble vitamin biosynthesis","type":"exact"},{"name":"fat-soluble vitamin formation","type":"exact"},{"name":"fat-soluble vitamin synthesis","type":"exact"}],"termid":"GO:0042362"}


id: PBO:0084103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanylyltransferase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of two molecules of Ceg1p and a homodimer of Cet1p, the mRNA 5'-triphosphatase subunit; nuclear import of Ceg1p requires interaction with Cet1p; mammalian capping enzyme is a single bifunctional polypeptide; human homolog RNGTT can complement yeast ceg1 null mutant","termid":"PBO:0084103"}


id: PBO:0076840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 7","termid":"PBO:0076840"}


id: GO:0010716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix disassembly","synonyms":[{"name":"down regulation of extracellular matrix disassembly","type":"exact"},{"name":"down-regulation of extracellular matrix disassembly","type":"exact"},{"name":"downregulation of extracellular matrix disassembly","type":"exact"},{"name":"inhibition of extracellular matrix disassembly","type":"narrow"},{"name":"negative regulation of extracellular matrix breakdown","type":"exact"},{"name":"negative regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010716"}


id: GO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prosaposin to initiate a change in cell activity. Prosaposin is the glycoprotein precursor of four cleavage products (saposins A, B, C and D).","definition_xrefs":["PMID:23690594","PMID:9388493","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prosaposin receptor activity","synonyms":[{"name":"prosaposin-activated receptor activity","type":"exact"}],"termid":"GO:0036505"}


id: PBO:0031610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_transport","termid":"PBO:0031610"}


id: PBO:0073437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 6","termid":"PBO:0073437"}


id: PBO:0051888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin alpha FG-GAP repeat containing 2","termid":"PBO:0051888"}


id: PBO:0077420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 158","termid":"PBO:0077420"}


id: PBO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounded_by","termid":"PBO:0034107"}


id: PBO:0090505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph2","termid":"PBO:0090505"}


id: GO:0072164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a mesonephric tubule over time, from its initial formation to the mature structure. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"mesonephric epithelium development","termid":"GO:0072163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule development","termid":"GO:0072164"}


id: PBO:0041067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein pseudogene 1","termid":"PBO:0041067"}


id: PBO:0065299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 3","termid":"PBO:0065299"}


id: PATO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and abdomen of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteroventral to","termid":"PATO:0001918"}


id: PBO:0046312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer lncRNA neighbor of NEAT1 and MALAT1","termid":"PBO:0046312"}


id: GO:0016231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-beta-D-glucosaminides.","definition_xrefs":["MetaCyc:3.2.1.52-RXN","EC:3.2.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"beta-N-acetylglucosaminidase activity","termid":"GO:0016231"}


id: PBO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase, short chain 1","termid":"PBO:0045764"}


id: GO:0047617
data:
  {"annotated_genes":["SJAG_00902","SJAG_04895","SJAG_04007","SJAG_01396"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92997,97811,103651,104897],"is_not":false,"summary":null,"term":"GO:0047617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a fatty acyl-CoA + H2O = a fatty acid + CoA + H+.","definition_xrefs":["RHEA:16781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00902":null,"SJAG_01396":null,"SJAG_04007":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"fatty acyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5690043","EC:3.1.2.3","Reactome:R-HSA-5690042","Reactome:R-HSA-5690066","GO:0016291","GO:0016292","GO:0008778","EC:3.1.2.20","MetaCyc:ACYL-COA-HYDROLASE-RXN"],"synonyms":[{"name":"acyl coenzyme A hydrolase activity","type":"related"},{"name":"acyl coenzyme A thioesterase activity","type":"related"},{"name":"acyl-CoA hydrolase activity","type":"broad"},{"name":"acyl-CoA thioesterase I activity","type":"narrow"},{"name":"acyl-CoA thioesterase II activity","type":"narrow"},{"name":"acyl-CoA thioesterase activity","type":"exact"},{"name":"acyl-CoA thiolesterase activity","type":"exact"},{"name":"thioesterase B","type":"related"},{"name":"thioesterase II","type":"related"}],"termid":"GO:0047617","terms_by_termid":{"GO:0047617":null}}


id: FYPO:0007242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abolished in both of the daughter cells formed as a result of the division of a mother cell in which NETO did not occur. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PomBase:mah","PMID:31719163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO in daughter cells","termid":"FYPO:0007240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005568","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished NETO in both daughter cells","synonyms":[{"name":"abolished NETO in both daughter cells during mitotic cell cycle","type":"related"},{"name":"abolished NETO in both daughter cells during vegetative growth","type":"exact"},{"name":"abolished activation of bipolar cell growth in both daughter cells","type":"related"},{"name":"abolished cell growth mode switching, monopolar to bipolar, in both daughter cells","type":"exact"},{"name":"abolished new end take-off in both daughter cells","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth in both daughter cells","type":"exact"}],"termid":"FYPO:0007242"}


id: PBO:0038735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7B","termid":"PBO:0038735"}


id: PBO:0058225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4515","termid":"PBO:0058225"}


id: GO:0098613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + methaneselenol => S-adenosyl-L-homocysteine + dimethyl selenide.","definition_xrefs":["PMID:17988700","PMID:14705","PMID:4380351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"methaneselenol methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408541"],"termid":"GO:0098613"}


id: PBO:0061063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 2","termid":"PBO:0061063"}


id: PBO:0058571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-3","termid":"PBO:0058571"}


id: PBO:0038993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 2","termid":"PBO:0038993"}


id: SO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["SO:ke","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_DNA_contact","synonyms":[{"name":"DNA_bind","type":"exact"},{"name":"polypeptide DNA contact","type":"exact"}],"termid":"SO:0100020"}


id: PBO:0031416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell-substrate_adhesion","termid":"PBO:0031416"}


id: FYPO:0001736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster transfer","termid":"FYPO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased iron-sulfur cluster transfer","synonyms":[{"name":"decreased iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"decreased iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"decreased iron-sulfur cluster transfer to ferredoxin","type":"narrow"},{"name":"decreased iron-sulphur cluster transfer","type":"exact"},{"name":"reduced iron-sulfur cluster transfer","type":"exact"}],"termid":"FYPO:0001736"}


id: PBO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1 like","termid":"PBO:0050847"}


id: PBO:0004065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR33","termid":"PBO:0004065"}


id: PBO:0078602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 15","termid":"PBO:0078602"}


id: _global:has_severity
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed severity in a cell. Can also be used to capture expressivity, i.e. the extent to which a phenotype is expressed in an individual.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_severity","synonyms":[{"name":"has_expressivity","type":"exact"}],"termid":"_global:has_severity"}


id: GO:0103037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP = H+ + L-glyceraldehyde 3-phosphate + NADPH.","definition_xrefs":["GOC:pz","PMID:18620424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-glyceraldehyde 3-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN0-5410"],"termid":"GO:0103037"}


id: PBO:0079695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 3","termid":"PBO:0079695"}


id: PBO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-haploinsufficient","termid":"PBO:0031856"}


id: GO:0005662
data:
  {"annotated_genes":["SJAG_03855","SJAG_01698","SJAG_03722"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107723,111674,112412],"is_not":false,"summary":null,"term":"GO:0005662"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa.","definition_xrefs":["PMID:9242902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replisome","termid":"GO:0043601"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01698":null,"SJAG_03722":null,"SJAG_03855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"DNA replication factor A complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Replication_protein_A"],"synonyms":[{"name":"RPA","type":"exact"},{"name":"replication protein A","type":"exact"}],"termid":"GO:0005662","terms_by_termid":{"GO:0005662":null}}


id: PBO:0064228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCG1 antisense RNA 1","termid":"PBO:0064228"}


id: GO:1902288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["PMID:16040633","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to oomycetes","termid":"GO:1902288"}


id: GO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type IX trimer","termid":"GO:0005594"}


id: PBO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L19 (predicted)","termid":"PBO:0001086"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PR:O14041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.08 gene.","definition_xrefs":["UniProtKB:O14041","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized nucleolar protein C2C4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.08","synonyms":[{"name":"Spom972h-SPAC2C4.08","type":"exact"}],"termid":"PR:O14041"}


id: FYPO:0003753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more specific polyadenylated messenger RNAs (mRNAs) measured in the nucleus is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002403","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased specific nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"increased level of specific nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased nuclear specific poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"increased specific nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"increased specific nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"increased specific nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"increased specific nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"},{"name":"specific nuclear poly(A)+ mRNA accumulation","type":"related"},{"name":"specific nuclear poly-A mRNA accumulation","type":"related"}],"termid":"FYPO:0003753"}


id: PBO:0067543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 689, pseudogene","termid":"PBO:0067543"}


id: PBO:0038572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR antisense RNA 1","termid":"PBO:0038572"}


id: PBO:0069047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 293, pseudogene","termid":"PBO:0069047"}


id: GO:0008645
data:
  {"annotated_genes":["SJAG_03820","SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99158],"is_not":false,"summary":null,"term":"GO:0008645"},{"annotations":[106835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[106836,110348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[110349,113351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The process in which hexose is transported across a membrane. Hexoses are aldoses with a chain of six carbon atoms in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"hexose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008646","GO:0008647","GO:0035428"],"synonyms":[{"name":"hexose membrane transport","type":"related"},{"name":"hexose transport","type":"related"},{"name":"high-affinity hexose transport","type":"narrow"},{"name":"low-affinity hexose transport","type":"narrow"}],"termid":"GO:0008645","terms_by_termid":{"GO:0008645":null,"GO:0046323":null,"GO:0098708":null,"GO:0140425":null}}


id: PBO:0063498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 7","termid":"PBO:0063498"}


id: FYPO:0002631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which dTTP biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal dTTP biosynthetic process","synonyms":[{"name":"abnormal dTTP biosynthesis","type":"exact"},{"name":"abnormal dTTP biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal dTTP biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0002631"}


id: GO:0018324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfenic acid, found in the active site of NADH peroxidase, nitrile hydratase, and peptide methionine sulfoxide reductase.","definition_xrefs":["PMID:2501303","RESID:AA0205"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-cysteine sulfenic acid (obsolete GO:0018324)","synonyms":[{"name":"enzyme active site formation via L-cysteine sulphenic acid","type":"exact"}],"termid":"GO:0018324"}


id: PBO:0052518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 31","termid":"PBO:0052518"}


id: PBO:0082399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate","termid":"PBO:0082399"}


id: PBO:0077700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenomodulin","termid":"PBO:0077700"}


id: GO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 3-diphospho-1D-myo-inositol 1,2,4,5,6-pentakisphosphate + phosphate + 2 H+.","definition_xrefs":["PMID:11502751","RHEA:56312","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity","secondary_identifiers":["MetaCyc:RXN-10976"],"termid":"GO:0052848"}


id: GO:0070005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"},{"relation_name":"is_a","term_name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cysteine-type aminopeptidase activity","termid":"GO:0070005"}


id: PBO:0063535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZRN3 antisense RNA 1","termid":"PBO:0063535"}


id: PBO:0079148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN9 intronic transcript 1","termid":"PBO:0079148"}


id: SO:1000011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a cytidine to a thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_transition","termid":"SO:1000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_T_transition","synonyms":[{"name":"C to T transition","type":"exact"}],"termid":"SO:1000011"}


id: PBO:0017758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex armadillo repeat subunit Gid5 (predicted)","termid":"PBO:0017758"}


id: PBO:0026703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_tryptophan_level","termid":"PBO:0026703"}


id: PBO:0004527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element associated protein Hop1","termid":"PBO:0004527"}


id: GO:0140271
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[113351,110349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The directed movement of hexose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"},{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"hexose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140271","terms_by_termid":{"GO:0098708":null,"GO:0140425":null}}


id: PBO:0027862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication_during_cellular_response_to_DNA_damage","termid":"PBO:0027862"}


id: PBO:0027636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027636"}


id: GO:0035490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"}


id: PBO:0012308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcriptional repressor protein BolA domain (predicted)","termid":"PBO:0012308"}


id: PBO:0068523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 119, pseudogene","termid":"PBO:0068523"}


id: PBO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CST telomere replication complex component 1","termid":"PBO:0044147"}


id: PBO:0017718
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Kinesin Like protein","termid":"PBO:0017718"}


id: PBO:0071821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 16","termid":"PBO:0071821"}


id: PBO:0088686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Iml1","termid":"PBO:0088686"}


id: PBO:0079448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 upstream neural differentiation-associated RNA","termid":"PBO:0079448"}


id: PBO:0085161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide excision repair (NER) protein; binds damaged DNA during NER; binds DNA in an ATP-dependent manner (with Rad7p) during NER; required for NER of non-transcribed chromatin; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0085161"}


id: PBO:0081333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 133","termid":"PBO:0081333"}


id: PBO:0026646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_8-oxo-7,8-dihydroguanine_DNA_N-glycosylase_activity","termid":"PBO:0026646"}


id: PR:Q9P382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup82 gene.","definition_xrefs":["UniProtKB:Q9P382","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup82 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.02","synonyms":[{"name":"Spom972h-nup82","type":"exact"},{"name":"nuclear pore protein nup82 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P382"}


id: PBO:0077530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 243","termid":"PBO:0077530"}


id: FYPO:0009112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which flocculation does not occur in conditions where wild-type cells floculate. Flocculation is the non-sexual aggregation of cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished flocculation during vegetative growth","termid":"FYPO:0009112"}


id: PBO:0036501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleus specific RNA binding exosome specificity factor Mmi1","termid":"PBO:0036501"}


id: GO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031661)","synonyms":[{"name":"G2/M-specific down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific inhibition of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G2/M-specific negative regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"negative regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031661"}


id: PBO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase subunit Tad3","termid":"PBO:0001071"}


id: PBO:0074864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49B","termid":"PBO:0074864"}


id: PBO:0076429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 5","termid":"PBO:0076429"}


id: PBO:0110492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 37","termid":"PBO:0110492"}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: GO:0008929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerone phosphate = methylglyoxal + phosphate.","definition_xrefs":["RHEA:17937","EC:4.2.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"methylglyoxal synthase activity","secondary_identifiers":["KEGG_REACTION:R01016","MetaCyc:METHGLYSYN-RXN"],"synonyms":[{"name":"glycerone-phosphate phospho-lyase (methylglyoxal-forming)","type":"related"},{"name":"glycerone-phosphate phospho-lyase activity","type":"related"},{"name":"methylglyoxal synthetase activity","type":"related"}],"termid":"GO:0008929"}


id: GO:1900523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to amylopectin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to amylopectin","termid":"GO:1900521"},{"relation_name":"positively_regulates","term_name":"response to amylopectin","termid":"GO:0044591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to amylopectin","synonyms":[{"name":"activation of response to amylopectin","type":"narrow"},{"name":"up regulation of response to amylopectin","type":"exact"},{"name":"up-regulation of response to amylopectin","type":"exact"},{"name":"upregulation of response to amylopectin","type":"exact"}],"termid":"GO:1900523"}


id: PBO:0070977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 1","termid":"PBO:0070977"}


id: PBO:0073705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI3 subunit of superkiller complex","termid":"PBO:0073705"}


id: PBO:0027357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0027357"}


id: GO:0072025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the distal convoluted tubule over time, from its formation to the mature structure. The distal convoluted tubule is the first segment of the nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal convoluted tubule development","termid":"GO:0072025"}


id: PBO:0054484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1884","termid":"PBO:0054484"}


id: FYPO:0001063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glycine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal glycine import","synonyms":[{"name":"abnormal glycine import across plasma membrane","type":"exact"},{"name":"abnormal glycine import during mitotic cell cycle","type":"related"},{"name":"abnormal glycine import during vegetative growth","type":"exact"},{"name":"abnormal glycine import into cell","type":"exact"},{"name":"abnormal glycine uptake","type":"exact"}],"termid":"FYPO:0001063"}


id: GO:0071187
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-b4, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-b4 complex","synonyms":[{"name":"Pcdhga1-Pcdhgb4 complex","type":"narrow"}],"termid":"GO:0071187"}


id: PBO:0077780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tonsoku like, DNA repair protein","termid":"PBO:0077780"}


id: FYPO:0004791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22959349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"increased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"increased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004791"}


id: PBO:0045453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAQ-box RNA dependent ATPase 1","termid":"PBO:0045453"}


id: PBO:0074194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 4","termid":"PBO:0074194"}


id: PBO:0068403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 222","termid":"PBO:0068403"}


id: PBO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_vegetative_growth","termid":"PBO:0031594"}


id: PR:Q9HE02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE02"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.02c","synonyms":[{"name":"Spom972h-med13","type":"exact"},{"name":"mediator complex subunit 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE02"}


id: PBO:0076242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 3","termid":"PBO:0076242"}


id: PBO:0111296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interpro_version","termid":"PBO:0111296"}


id: GO:0071578
data:
  {"annotated_genes":["SJAG_04185","SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100349,109398],"is_not":false,"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of zinc(2+) ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:18637840","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02968":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"zinc ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006831","GO:0006830","GO:0140160","GO:0044749"],"synonyms":[{"name":"high-affinity zinc II ion transmembrane import","type":"narrow"},{"name":"high-affinity zinc II ion transport","type":"narrow"},{"name":"low-affinity zinc II ion transport","type":"narrow"},{"name":"zinc II ion plasma membrane import","type":"exact"},{"name":"zinc II ion transmembrane import","type":"exact"},{"name":"zinc import","type":"exact"},{"name":"zinc ion import into cell","type":"exact"},{"name":"zinc ion transmembrane import","type":"related"},{"name":"zinc uptake","type":"exact"}],"termid":"GO:0071578","terms_by_termid":{"GO:0071578":null}}


id: GO:0050428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"3'-phosphoadenosine 5'-phosphosulfate metabolic process","termid":"GO:0050427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate biosynthetic process","synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate anabolism","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulfate biosynthesis","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulfate formation","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulfate synthesis","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate biosynthesis","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate biosynthetic process","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate biosynthesis","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate biosynthetic process","type":"exact"},{"name":"PAPS biosynthesis","type":"exact"},{"name":"PAPS biosynthetic process","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate biosynthesis","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate biosynthetic process","type":"exact"},{"name":"phosphoadenosine phosphosulfate biosynthesis","type":"exact"},{"name":"phosphoadenosine phosphosulfate biosynthetic process","type":"exact"}],"termid":"GO:0050428"}


id: PBO:0048568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 1","termid":"PBO:0048568"}


id: GO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) 5beta-cholestan-3-one + NADP+ = cholest-4-en-3-one + NADPH + H+ and (2) 17,21-dihydroxy-5beta-pregnane-3,11,20-trione + NADP+ = cortisone + NADPH + H+.","definition_xrefs":["MetaCyc:CORTISONE-BETA-REDUCTASE-RXN","EC:1.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"delta4-3-oxosteroid 5beta-reductase activity","secondary_identifiers":["MetaCyc:RXN-9726","MetaCyc:CHOLESTENONE-5-BETA-REDUCTASE-RXN","GO:0047752"],"synonyms":[{"name":"3-oxo-5beta-steroid:NADP+ delta4-oxidoreductase activity","type":"related"},{"name":"3-oxo-Delta(4)-steroid 5-beta-reductase activity","type":"related"},{"name":"3-oxo-delta4-steroid 5beta-reductase activity","type":"related"},{"name":"4,5beta-dihydrocortisone:NADP+ delta4-oxidoreductase activity","type":"related"},{"name":"5-beta-reductase activity","type":"broad"},{"name":"5beta-cholestan-3-one:NADP+ 4,5-oxidoreductase activity","type":"related"},{"name":"5beta-reductase activity","type":"related"},{"name":"androstenedione 5-beta-reductase activity","type":"related"},{"name":"androstenedione 5beta-reductase activity","type":"related"},{"name":"cholestenone 5-beta-reductase activity","type":"exact"},{"name":"cholestenone 5b-reductase activity","type":"exact"},{"name":"cholestenone 5beta-reductase activity","type":"related"},{"name":"cortisone 5-beta-reductase activity","type":"related"},{"name":"cortisone 5beta-reductase activity","type":"related"},{"name":"cortisone b-reductase activity","type":"exact"},{"name":"cortisone beta-reductase activity","type":"exact"},{"name":"cortisone delta(4)-5-beta-reductase activity","type":"related"},{"name":"cortisone delta4-5beta-reductase activity","type":"related"},{"name":"delta(4)-3-ketosteroid 5-beta-reductase activity","type":"related"},{"name":"delta(4)-5-beta-reductase activity","type":"related"},{"name":"delta(4)-hydrogenase activity","type":"related"},{"name":"delta4-3-ketosteroid 5beta-reductase activity","type":"related"},{"name":"delta4-3-oxosteroid 5-beta-reductase activity","type":"exact"},{"name":"delta4-5beta-reductase activity","type":"related"},{"name":"delta4-hydrogenase activity","type":"related"},{"name":"steroid 5-beta-reductase activity","type":"related"},{"name":"steroid 5beta-reductase activity","type":"related"},{"name":"testosterone 5-beta-reductase activity","type":"related"},{"name":"testosterone 5beta-reductase activity","type":"related"}],"termid":"GO:0047787"}


id: PBO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-depends_on","termid":"PBO:0017476"}


id: GO:0002189
data:
  {"annotated_genes":["SJAG_04882","SJAG_04970","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93888,106106,111120],"is_not":false,"summary":null,"term":"GO:0002189"}]},"cv_name":"cellular_component","definition":"A protein complex having ribose phosphate diphosphokinase activity.","definition_xrefs":["GO:hjd","PMID:9348095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribose phosphate diphosphokinase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PRPP synthetase complex","type":"exact"},{"name":"phosphoribosylpyrophosphate synthetase complex","type":"exact"}],"termid":"GO:0002189","terms_by_termid":{"GO:0002189":null}}


id: PBO:0063984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 18","termid":"PBO:0063984"}


id: PR:P87133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug143 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 143 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.06c","synonyms":[{"name":"Spom972h-mug143","type":"exact"}],"termid":"PR:P87133"}


id: PBO:0082865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm E; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm E","termid":"PBO:0082865"}


id: GO:1901903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tyrocidine.","definition_xrefs":["GOC:TermGenie","PMID:9352938","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tyrocidine metabolic process","termid":"GO:1901902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine catabolic process","synonyms":[{"name":"tyrocidine breakdown","type":"exact"},{"name":"tyrocidine catabolism","type":"exact"},{"name":"tyrocidine degradation","type":"exact"}],"termid":"GO:1901903"}


id: FYPO:0002591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation is abnormal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone phosphorylation during vegetative growth","synonyms":[{"name":"abnormal histone phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002591"}


id: PBO:0032721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_MCB_promoter","termid":"PBO:0032721"}


id: GO:0102085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + L-glutamate + ATP = H+ + p-aminobenzoyl glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-(4-aminobenzoyl)-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10884"],"termid":"GO:0102085"}


id: PBO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 34","termid":"PBO:0071428"}


id: PBO:0063740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 5","termid":"PBO:0063740"}


id: PBO:0066975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 278","termid":"PBO:0066975"}


id: PBO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_thiamine","termid":"PBO:0030374"}


id: PBO:0050910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 1 pseudogene 1","termid":"PBO:0050910"}


id: GO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the ectoderm, mesoderm and endoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of primary germ layer","termid":"GO:0001704"}


id: GO:0160022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue by discharging a portion of the secreting cell when intracellular components are freed into a lumen through the shedding of whole pieces of the cytoplasm.","definition_xrefs":["PMID:25960390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"apocrine secretion","synonyms":[{"name":"secretion by cell decapitation","type":"related"},{"name":"secretion by membrane budding","type":"related"}],"termid":"GO:0160022"}


id: PBO:0058856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8085","termid":"PBO:0058856"}


id: PBO:0064803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A","termid":"PBO:0064803"}


id: PBO:0066321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: PBO:0085669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; likely involved directly in dityrosine layer assembly; induced during sporulation; repressed during vegetative growth by Sum1p and Hst1p; sequence similar to adjacent ORF, IRC18/YJL037W, and the irc18 loh1 double mutant exhibits reduced dityrosine fluorescence relative to the single mutants; SWAT-GFP and mCherry fusion proteins localize to the cytosol; proposed role in maintenance of genome integrity","termid":"PBO:0085669"}


id: GO:0044535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: very-long-chain fatty acyl-CoA (C22 - C24) + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide.","definition_xrefs":["PMID:17458872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"very-long-chain fatty acyl-CoA oxidase activity","synonyms":[{"name":"VLC fatty-acyl-CoA oxidase activity","type":"exact"},{"name":"very long chain fatty-acyl-CoA oxidase activity","type":"exact"},{"name":"very-long-chain acyl-CoA oxidase activity","type":"exact"}],"termid":"GO:0044535"}


id: PBO:0071882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 20","termid":"PBO:0071882"}


id: GO:0004080
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104732],"is_not":false,"summary":null,"term":"GO:0004080"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + apo-(propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (propanoyl-CoA:carbon-dioxide ligase (ADP-forming)).","definition_xrefs":["EC:6.3.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biotin-protein ligase activity","termid":"GO:0018271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016874"],"is_obsolete":false,"name":"biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:6.3.4.10-RXN","RHEA:11204"],"synonyms":[{"name":"biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] synthetase activity","type":"related"},{"name":"biotin-propionyl coenzyme A carboxylase synthetase activity","type":"related"},{"name":"biotin-propionyl-CoA-carboxylase (ATP-hydrolysing) ligase activity","type":"related"},{"name":"biotin-propionyl-CoA-carboxylase (ATP-hydrolysing) synthetase activity","type":"related"},{"name":"biotin:apo-propanoyl-CoA:carbon-dioxide ligase (ADP-forming) ligase (AMP-forming)","type":"related"},{"name":"holocarboxylase synthetase activity","type":"related"},{"name":"propionyl coenzyme A holocarboxylase synthetase activity","type":"related"},{"name":"propionyl-CoA holocarboxylase synthetase activity","type":"related"}],"termid":"GO:0004080","terms_by_termid":{"GO:0004080":null}}


id: PBO:0090135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ebp2","termid":"PBO:0090135"}


id: PBO:0027170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_microtubule_minus-end","termid":"PBO:0027170"}


id: PBO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPR2 like, GATOR1 complex subunit","termid":"PBO:0061403"}


id: PBO:0061950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 2","termid":"PBO:0061950"}


id: PR:P78966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mam1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating factor M secretion protein mam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.02c","synonyms":[{"name":"P-glycoprotein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mam1","type":"exact"},{"name":"multiple drug resistance protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78966"}


id: PBO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Sds21","termid":"PBO:0015704"}


id: GO:0008242
data:
  {"annotated_genes":["SJAG_03316","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94549,95369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of non-standard peptide bonds releasing substituted amino acids such as pyroglutamate or cleave isopeptide bonds, such as many deubiquitinating enzymes.","definition_xrefs":["PMID:9920379","PMID:20157488","EC:3.4.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"omega peptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptidase activity, acting on peptides containing modified amino acids","type":"related"}],"termid":"GO:0008242","terms_by_termid":{"GO:0036374":null}}


id: GO:0048588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cell, where growth contributes to the progression of the cell over time from one condition to another.","definition_xrefs":["GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental cell growth","synonyms":[{"name":"developmental growth of a unicellular organism","type":"exact"}],"termid":"GO:0048588"}


id: FYPO:0006055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type) during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body","termid":"FYPO:0003541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006055"}


id: GO:2000659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000659"}


id: GO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right ventricular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003221"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular trabecular myocardium morphogenesis","termid":"GO:0003227"}


id: PBO:0076468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2","termid":"PBO:0076468"}


id: PBO:0075474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 25","termid":"PBO:0075474"}


id: PBO:0091084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSB-forming protein Rec12/Spo11","termid":"PBO:0091084"}


id: PBO:0029726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis_resulting_in_septated_cell","termid":"PBO:0029726"}


id: PBO:0038315
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previous_curator_name","termid":"PBO:0038315"}


id: MOD:01052
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethoxybenzyl Trp","termid":"MOD:01052"}


id: GO:0000077
data:
  {"annotated_genes":["SJAG_01429","SJAG_04287","SJAG_03048","SJAG_03898","SJAG_00486","SJAG_04140","SJAG_03720","SJAG_02576","SJAG_04280","SJAG_03160","SJAG_00429","SJAG_00364","SJAG_02026","SJAG_02098","SJAG_01873","SJAG_00169","SJAG_00640","SJAG_01708","SJAG_05373","SJAG_03026","SJAG_00327","SJAG_03942","SJAG_01855","SJAG_02563","SJAG_02771","SJAG_01680","SJAG_01044","SJAG_01677","SJAG_00623","SJAG_01146","SJAG_01605","SJAG_01205","SJAG_04671","SJAG_04332","SJAG_01084","SJAG_02266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105503],"is_not":false,"summary":null,"term":"GO:0000077"},{"annotations":[110638,113841,112398,110432,79015,112168,95355,98530,107378,90125,87972,89745,105504,102789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[87491,105863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[86422,96699,95523,85334,90128,113170,113842,105506,87614,87973,110433,97216,102791,107909,84775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[103849,90717,112228,108216,84776,88712,95357,85335,92195,107910,95524,85380,97021,102792,98532,87615,86647,97688,112227,113251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a DNA damage checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"},{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072422","Wikipedia:Postreplication_checkpoint","Wikipedia:DNA_damage_checkpoint"],"synonyms":[{"name":"DNA damage checkpoint","type":"exact"},{"name":"DNA damage response, signal transduction resulting in cell cycle arrest","type":"narrow"},{"name":"signal transduction involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:0000077","terms_by_termid":{"GO:0000077":null,"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: PBO:0087747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO and TREX complexes; THO connects transcription elongation and mitotic recombination, and TREX is recruited to activated genes and couples transcription to mRNA export; involved in telomere maintenance","termid":"PBO:0087747"}


id: PBO:0033758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_gamma-tubulin_complex_localization_to_single_mitotic_spindle_pole_body","termid":"PBO:0033758"}


id: GO:1900553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"asperfuranone metabolic process","termid":"GO:1900552"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"asperfuranone catabolic process","synonyms":[{"name":"asperfuranone breakdown","type":"exact"},{"name":"asperfuranone catabolism","type":"exact"},{"name":"asperfuranone degradation","type":"exact"}],"termid":"GO:1900553"}


id: PBO:0063201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(rC) binding protein 1","termid":"PBO:0063201"}


id: FYPO:0006103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short cytoplasmic microtubules","termid":"FYPO:0002760"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"short interphase microtubules","synonyms":[{"name":"short cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules","type":"exact"},{"name":"short interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006103"}


id: PBO:0087323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP protein component of spliceosomal snRNPs; required for pre-mRNA splicing and snRNP biogenesis; in null mutant newly-synthesized snRNAs are destabilized and 3'-end processing is slowed","termid":"PBO:0087323"}


id: PBO:0066539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 5","termid":"PBO:0066539"}


id: GO:0060914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the heart from unspecified parts. This process begins with the specific processes that contribute to the appearance of the heart field and the arrival of cardiac neural crest to the heart region. The process ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart formation","synonyms":[{"name":"cardiogenesis","type":"related"}],"termid":"GO:0060914"}


id: PBO:0038992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 1","termid":"PBO:0038992"}


id: PBO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progeroid disorders","termid":"PBO:0001247"}


id: PBO:0088810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, LARP1 family Slr1","termid":"PBO:0088810"}


id: PBO:0084872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; mitochondrially-encoded; polymorphic in different strains due to variation in number of AAT (asparagine) codons; translated near the mitochondrial inner membrane; may have a role in loss of mitochondrial DNA under stress conditions","termid":"PBO:0084872"}


id: PBO:0042262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5 pseudogene 1","termid":"PBO:0042262"}


id: PBO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein","termid":"PBO:0000792"}


id: PBO:0091866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA snR48","termid":"PBO:0091866"}


id: PBO:0057918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3621","termid":"PBO:0057918"}


id: GO:1990855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of myo-inositol from outside of a cell into the intracellular region of a cell across the plasma membrane.","definition_xrefs":["PMID:9560432"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol import across plasma membrane (obsolete GO:1990855)","termid":"GO:1990855"}


id: GO:0004641
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106440],"is_not":false,"summary":null,"term":"GO:0004641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:23032","EC:6.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"phosphoribosylformylglycinamidine cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:AIRS-RXN","KEGG_REACTION:R04208","Reactome:R-HSA-73810"],"synonyms":[{"name":"2-(formamido)-1-N-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"2-(formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"5'-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"AIR synthase activity","type":"related"},{"name":"AIR synthetase activity","type":"related"},{"name":"AIRS activity","type":"related"},{"name":"phosphoribosyl-aminoimidazole synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazole synthetase activity","type":"related"}],"termid":"GO:0004641","terms_by_termid":{"GO:0004641":null}}


id: PBO:0063216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 1","termid":"PBO:0063216"}


id: GO:0003134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodermal-mesodermal cell signaling","termid":"GO:0003133"},{"relation_name":"part_of","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling involved in heart induction","synonyms":[{"name":"endodermal-mesodermal cell signalling involved in heart induction","type":"exact"}],"termid":"GO:0003134"}


id: PBO:0005782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog","termid":"PBO:0005782"}


id: GO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host cell wall (obsolete GO:0052020)","synonyms":[{"name":"metabolism of host cell wall by organism","type":"exact"}],"termid":"GO:0052020"}


id: PBO:0065816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A antisense RNA 1","termid":"PBO:0065816"}


id: PBO:0087758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease","termid":"PBO:0087758"}


id: GO:0010679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of salicylic acid.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in salicylic acid metabolism (obsolete GO:0010679)","termid":"GO:0010679"}


id: GO:1903370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of foraging behavior.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:8677262","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of foraging behavior","termid":"GO:1903368"},{"relation_name":"positively_regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of foraging behavior","synonyms":[{"name":"activation of foraging behavior","type":"narrow"},{"name":"up regulation of foraging behavior","type":"exact"},{"name":"up-regulation of foraging behavior","type":"exact"},{"name":"upregulation of foraging behavior","type":"exact"}],"termid":"GO:1903370"}


id: GO:1903656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["GOC:TermGenie","PMID:25049409","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of type IV pilus biogenesis","synonyms":[{"name":"regulation of TFP biogenesis","type":"exact"},{"name":"regulation of type 4 pilus biogenesis","type":"exact"},{"name":"regulation of type IV fimbria assembly","type":"exact"},{"name":"regulation of type IV fimbria biogenesis","type":"exact"},{"name":"regulation of type IV fimbriae assembly","type":"exact"},{"name":"regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"regulation of type IV fimbrial assembly","type":"exact"},{"name":"regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"regulation of type IV fimbrium assembly","type":"exact"},{"name":"regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"regulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903656"}


id: PBO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 28","termid":"PBO:0072253"}


id: PBO:0077991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing","termid":"PBO:0077991"}


id: GO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential depolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential depolarization","type":"narrow"}],"termid":"GO:0086041"}


id: PBO:0062965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 8","termid":"PBO:0062965"}


id: PBO:0053729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 943","termid":"PBO:0053729"}


id: PBO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck2","termid":"PBO:0002818"}


id: GO:1904552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["PMID:16382163","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"chemotaxis to arachidonic acid","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chemotaxis to arachidonic acid","termid":"GO:1904552"}


id: PBO:0055965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 78, pseudogene","termid":"PBO:0055965"}


id: PBO:0079684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitination factor E4A","termid":"PBO:0079684"}


id: GO:0001018
data:
  {"annotated_genes":["SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91317],"is_not":false,"summary":null,"term":"GO:0001018"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region that controls the transcription of the mitochondrial DNA.","definition_xrefs":["GOC:txnOH","PMID:20056105","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0000976","GO:0003677"],"is_obsolete":false,"name":"mitochondrial promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001045","GO:0070361","GO:0070362","GO:0070363","GO:0070364","GO:0001044","GO:0000997"],"synonyms":[{"name":"HSP coding strand binding","type":"narrow"},{"name":"HSP non-coding strand binding","type":"narrow"},{"name":"HSPas binding","type":"narrow"},{"name":"HSPs binding","type":"narrow"},{"name":"LSP coding strand binding","type":"narrow"},{"name":"LSP non-coding strand binding","type":"narrow"},{"name":"LSPas binding","type":"narrow"},{"name":"LSPs binding","type":"narrow"},{"name":"mitochondrial RNA polymerase core promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase core promoter sequence-specific DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase regulatory region DNA binding","type":"related"},{"name":"mitochondrial RNA polymerase regulatory region sequence-specific DNA binding","type":"related"},{"name":"mitochondrial heavy strand promoter anti-sense binding","type":"narrow"},{"name":"mitochondrial heavy strand promoter sense binding","type":"narrow"},{"name":"mitochondrial light strand promoter anti-sense binding","type":"narrow"},{"name":"mitochondrial light strand promoter sense binding","type":"narrow"},{"name":"mitochondrial proximal promoter sequence-specific DNA binding","type":"related"}],"termid":"GO:0001018","terms_by_termid":{"GO:0001018":null}}


id: FYPO:0002156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and one septum, and in which the septum is located between the two nuclei but is not perpendicular to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"misoriented septum during vegetative growth","termid":"FYPO:0001390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"binucleate monoseptate cell, with angled septum","synonyms":[{"name":"binucleate monoseptate cell, with angled septum during mitotic cell cycle","type":"related"},{"name":"binucleate monoseptate cell, with angled septum, during vegetative growth","type":"exact"},{"name":"binucleate monoseptate cell, with septum not orthogonal to long axis","type":"related"}],"termid":"FYPO:0002156"}


id: GO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The heat generation process that results in a rise in body temperature above the normal, often as a response to infection.","definition_xrefs":["GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute-phase response","termid":"GO:0006953"},{"relation_name":"is_a","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fever generation","secondary_identifiers":["Wikipedia:Fever"],"synonyms":[{"name":"pyrexia","type":"broad"}],"termid":"GO:0001660"}


id: PBO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase (predicted)","termid":"PBO:0002128"}


id: PBO:0067456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 581, pseudogene","termid":"PBO:0067456"}


id: PBO:0063309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 3","termid":"PBO:0063309"}


id: PBO:0029843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation","termid":"PBO:0029843"}


id: GO:0051481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytosolic calcium ion concentration","synonyms":[{"name":"reduction of calcium ion concentration in cytosol","type":"exact"},{"name":"cytoplasmic calcium ion concentration reduction","type":"broad"},{"name":"cytosolic calcium ion concentration reduction","type":"exact"},{"name":"reduction of calcium ion concentration in cytoplasm","type":"broad"},{"name":"reduction of cytoplasmic calcium ion concentration","type":"broad"},{"name":"reduction of cytosolic calcium ion concentration","type":"exact"}],"termid":"GO:0051481"}


id: PBO:0060098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 45","termid":"PBO:0060098"}


id: PBO:0074402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 1","termid":"PBO:0074402"}


id: GO:0008414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a CDP-alcohol group from one compound to another.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CDP-alcohol phosphotransferase activity","termid":"GO:0008414"}


id: GO:0103006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (9R,10S)-dihydroxystearate + O2 + NADPH = 9,10,18-trihydroxystearate + H2O + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"9,10-dihydroxystearate hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9807"],"termid":"GO:0103006"}


id: GO:0090373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of glycerol transport","termid":"GO:0090371"},{"relation_name":"negatively_regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycerol transport","termid":"GO:0090373"}


id: PBO:0057668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260a","termid":"PBO:0057668"}


id: GO:0036165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of an increase in temperature.","definition_xrefs":["GOC:di","PMID:22365851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:0036168"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to heat","synonyms":[{"name":"invasive growth in response to elevated temperature","type":"exact"},{"name":"invasive growth in response to high temperature","type":"exact"},{"name":"invasive growth in response to temperature stimulus","type":"broad"}],"termid":"GO:0036165"}


id: PBO:0036239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga8","termid":"PBO:0036239"}


id: PBO:0039043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 antisense RNA 1","termid":"PBO:0039043"}


id: PBO:0053044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4","termid":"PBO:0053044"}


id: PBO:0057284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 504","termid":"PBO:0057284"}


id: FYPO:0006415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis II.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0000120"],"is_obsolete":false,"name":"overlapping meiosis II spindles","synonyms":[{"name":"overlapping spindles at meiosis II","type":"exact"},{"name":"overlapping spindles during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006415"}


id: GO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with the conversion of glutamine to glutamate catalyzed by the enzyme glutamate synthase (NADPH) (EC:1.4.1.13).","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine catabolic process to fumarate","termid":"GO:0019460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glutamine catabolic process to fumarate, using glutamate synthase (NADPH)","secondary_identifiers":["MetaCyc:GLUTAMINEFUM-PWY"],"synonyms":[{"name":"glutamate catabolic process to fumarate, using glutamate synthase (NADPH)","type":"related"},{"name":"glutamine breakdown to fumarate, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamine degradation to fumarate, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019461"}


id: PBO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1-Scd","termid":"PBO:0000384"}


id: GO:1901238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + tungstate(in) = ADP + phosphate + tungstate(out).","definition_xrefs":["RHEA:35027","PMID:16952940","PMID:21784948","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type tungstate transporter activity","secondary_identifiers":["EC:7.3.2.6","MetaCyc:TRANS-RXN-242B","GO:1901237"],"synonyms":[{"name":"ATPase-coupled tungstate transmembrane transporter activity","type":"related"},{"name":"tungstate transmembrane transporter activity","type":"broad"},{"name":"tungstate transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901238"}


id: PBO:0088502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane ABC1 kinase family protein, unknown role, human ADCK2 ortholog","termid":"PBO:0088502"}


id: PBO:0079672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 2","termid":"PBO:0079672"}


id: PBO:0042916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CF transmembrane conductance regulator","termid":"PBO:0042916"}


id: PBO:0088118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; member of the serine carboxypeptidase family; N-glycosylated","termid":"PBO:0088118"}


id: GO:0047341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-L-fucose 1-phosphate + GTP + H+ = diphosphate + GDP-beta-L-fucose.","definition_xrefs":["RHEA:13549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6787533","MetaCyc:2.7.7.30-RXN","KEGG_REACTION:R01951","EC:2.7.7.30"],"synonyms":[{"name":"GDP fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-L-fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-fucose diphosphorylase activity","type":"related"},{"name":"GDP-fucose pyrophosphorylase activity","type":"related"},{"name":"GTP:L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:beta-L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:fucose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"guanosine diphosphate L-fucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047341"}


id: PBO:0069430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 695, pseudogene","termid":"PBO:0069430"}


id: PBO:0028757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1_phase_entry_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028757"}


id: PBO:0086253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that plays a role in modification of tRNA wobble nucleosides; protein plays role in tRNA wobble nucleoside modification with Elongator complex; involved in sensitivity to G1 arrest induced by zymocin; interacts with chromatin throughout the genome; also interacts with Cdc19p","termid":"PBO:0086253"}


id: GO:1905233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a codeine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:24914722","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to codeine","termid":"GO:1905233"}


id: PBO:0047758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor alpha","termid":"PBO:0047758"}


id: PR:000050532
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me1:(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf2/Me1:(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050532"}


id: PBO:0034563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_iron-sulfur_cluster_binding","termid":"PBO:0034563"}


id: PBO:0091685
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated non-conserved ORF in low complexity region","termid":"PBO:0091685"}


id: SO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with either a single protein product, or for which the regions encoding all its protein products overlap.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"monocistronic_transcript","termid":"SO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Monocistronic_mRNA"],"synonyms":[{"name":"monocistronic mRNA","type":"exact"},{"name":"monocistronic processed transcript","type":"exact"}],"termid":"SO:0000633"}


id: GO:0070132
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"regulation of mitochondrial translational initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070132","terms_by_termid":{"GO:0070134":null}}


id: GO:0008034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein binding (obsolete GO:0008034)","synonyms":[{"name":"lipoprotein binding","type":"exact"}],"termid":"GO:0008034"}


