# terms

id: FYPO:0004917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:11402029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased positive regulation of protein kinase activity","synonyms":[{"name":"decreased activation of protein kinase activity","type":"narrow"},{"name":"decreased positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0004917"}


id: PR:O94566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug184 gene.","definition_xrefs":["UniProtKB:O94566","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 184 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.09c","synonyms":[{"name":"Spom972h-mug184","type":"exact"}],"termid":"PR:O94566"}


id: PBO:0030930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyruvate_dehydrogenase_activity","termid":"PBO:0030930"}


id: PBO:0042883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 276","termid":"PBO:0042883"}


id: PBO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 1","termid":"PBO:0050816"}


id: GO:0006275
data:
  {"annotated_genes":["SJAG_03695","SJAG_04671","SJAG_02162","SJAG_03097","SJAG_02074","SJAG_00247","SJAG_03438","SJAG_02724","SJAG_03720","SJAG_03997","SJAG_01210","SJAG_01068","SJAG_03048","SJAG_04855","SJAG_03160","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105075,113008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[98541,105076,93950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[113417,108218,99497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[112400,85274,98546,102793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[95525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"},{"annotations":[99404],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1902681"},{"annotations":[98446,102806,104697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043111"},{"annotations":[95526,99405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[98447,111184,95527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[95528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[98448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_00364":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006275","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0043111":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0040155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 1","termid":"PBO:0040155"}


id: PBO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1 (predicted)","termid":"PBO:0000576"}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: PR:Q9P7L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubx4 gene.","definition_xrefs":["UniProtKB:Q9P7L2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.11","synonyms":[{"name":"Spom972h-ubx4","type":"exact"}],"termid":"PR:Q9P7L2"}


id: PBO:0046752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 6","termid":"PBO:0046752"}


id: SO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect which changes the regulatory region of a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000053 sequence_variant_affecting_regulatory_region (obsolete SO:0000053)","synonyms":[{"name":"mutation affecting regulatory region","type":"related"},{"name":"sequence variant affecting regulatory region","type":"exact"}],"termid":"SO:0000053"}


id: PBO:0082018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger X-linked duplicated B","termid":"PBO:0082018"}


id: GO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by an opioid binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"},{"name":"opioid receptor, adenylate cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0031635"}


id: GO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900922"],"synonyms":[{"name":"activation of L-glutamate import","type":"narrow"},{"name":"activation of L-glutamate transport","type":"narrow"},{"name":"activation of L-glutamate uptake","type":"narrow"},{"name":"positive regulation of L-glutamate import","type":"broad"},{"name":"positive regulation of L-glutamate transport","type":"broad"},{"name":"positive regulation of L-glutamate uptake","type":"related"},{"name":"stimulation of L-glutamate transport","type":"narrow"},{"name":"up regulation of L-glutamate import","type":"exact"},{"name":"up regulation of L-glutamate transport","type":"broad"},{"name":"up regulation of L-glutamate uptake","type":"related"},{"name":"up-regulation of L-glutamate import","type":"exact"},{"name":"up-regulation of L-glutamate transport","type":"exact"},{"name":"up-regulation of L-glutamate uptake","type":"related"},{"name":"upregulation of L-glutamate import","type":"exact"},{"name":"upregulation of L-glutamate transport","type":"broad"},{"name":"upregulation of L-glutamate uptake","type":"related"}],"termid":"GO:0002038"}


id: PBO:0041588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 3","termid":"PBO:0041588"}


id: SO:1000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000122 sequence_variant_causing_polypeptide_post_translational_processing_change (obsolete SO:1000122)","synonyms":[{"name":"mutation causing polypeptide post translational processing change","type":"related"},{"name":"polypeptide post-translational processing affected","type":"exact"},{"name":"sequence variant causing polypeptide post translational processing change","type":"exact"}],"termid":"SO:1000122"}


id: GO:0072548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dicoumaroyl monocaffeoyl spermidine + NADPH + O2 = monocoumaroyl dicaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity","termid":"GO:0072548"}


id: GO:0008930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylthioadenosine + H2O = adenine + 5-methylthio-D-ribose.","definition_xrefs":["EC:3.2.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"methylthioadenosine nucleosidase activity","secondary_identifiers":["MetaCyc:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN","RHEA:13617"],"synonyms":[{"name":"5'-methylthioadenosine nucleosidase activity","type":"related"},{"name":"MTA nucleosidase activity","type":"related"},{"name":"MeSAdo nucleosidase activity","type":"related"},{"name":"S-methyl-5'-thioadenosine adeninehyrolase activity","type":"related"},{"name":"methylthioadenosine methylthioribohydrolase activity","type":"related"}],"termid":"GO:0008930"}


id: PBQ:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1. IIn some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cellular quiescence following G1 arrest","type":"exact"},{"name":"quiescence following G1 arrest","type":"broad"}],"termid":"PBQ:0000002"}


id: GO:1904352
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95559],"is_not":false,"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein catabolic process in the vacuole.","definition_xrefs":["PMID:25635054","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process in the vacuole","termid":"GO:1904350"},{"relation_name":"positively_regulates","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of protein catabolic process in the vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein catabolic process in the vacuole","type":"narrow"},{"name":"activation of vacuolar protein breakdown","type":"related"},{"name":"activation of vacuolar protein catabolic process","type":"related"},{"name":"activation of vacuolar protein catabolism","type":"related"},{"name":"activation of vacuolar protein degradation","type":"related"},{"name":"positive regulation of vacuolar protein breakdown","type":"related"},{"name":"positive regulation of vacuolar protein catabolic process","type":"related"},{"name":"positive regulation of vacuolar protein catabolism","type":"related"},{"name":"positive regulation of vacuolar protein degradation","type":"related"},{"name":"up regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up regulation of vacuolar protein breakdown","type":"related"},{"name":"up regulation of vacuolar protein catabolic process","type":"related"},{"name":"up regulation of vacuolar protein catabolism","type":"related"},{"name":"up regulation of vacuolar protein degradation","type":"related"},{"name":"up-regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up-regulation of vacuolar protein breakdown","type":"related"},{"name":"up-regulation of vacuolar protein catabolic process","type":"related"},{"name":"up-regulation of vacuolar protein catabolism","type":"related"},{"name":"up-regulation of vacuolar protein degradation","type":"related"},{"name":"upregulation of protein catabolic process in the vacuole","type":"exact"},{"name":"upregulation of vacuolar protein breakdown","type":"related"},{"name":"upregulation of vacuolar protein catabolic process","type":"related"},{"name":"upregulation of vacuolar protein catabolism","type":"related"},{"name":"upregulation of vacuolar protein degradation","type":"related"}],"termid":"GO:1904352","terms_by_termid":{"GO:1904352":null}}


id: PBO:0062062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Z member 1","termid":"PBO:0062062"}


id: PBO:0011152
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ichthyosis","termid":"PBO:0011152"}


id: PBO:0052967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE-1 type transposase domain containing 1 pseudogene 1","termid":"PBO:0052967"}


id: GO:1901584
data:
  {"annotated_genes":["SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104165],"is_not":false,"summary":null,"term":"GO:1901584"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tetrapeptide from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tetrapeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901584","terms_by_termid":{"GO:1901584":null}}


id: MOD:02029
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively specifies the boundary conformation of two adjacent source amino acid residues, the second (C-term side) being a L-proline, where the carbonyl group of the amide bond of the N-side of the L-proline is positioned such that the organodiyl group is in the cis orientation (omega=0)","definition_xrefs":["PubMed:24116866","ChEBI:83833","PubMed:5485910","PubMed:15735342","PubMed:15311922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-peptidyl-L-proline","termid":"MOD:02029"}


id: PBO:0108984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 8","termid":"PBO:0108984"}


id: GO:0004619
data:
  {"annotated_genes":["SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91193],"is_not":false,"summary":null,"term":"GO:0004619"},{"annotations":[91192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046538"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate.","definition_xrefs":["RHEA:15901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate mutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71654","Reactome:R-HSA-71445"],"synonyms":[{"name":"D-phosphoglycerate 2,3-phosphomutase activity","type":"related"},{"name":"PGA mutase activity","type":"related"},{"name":"PGAM activity","type":"related"},{"name":"PGM","type":"exact"},{"name":"phosphoglycerate phosphomutase activity","type":"related"},{"name":"phosphoglyceromutase activity","type":"related"}],"termid":"GO:0004619","terms_by_termid":{"GO:0004619":null,"GO:0046538":null}}


id: PBO:0029216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_wall","termid":"PBO:0029216"}


id: GO:0034999
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligosaccharyltransferase (OST) complex that contains the seven polypeptides found in OST complex I, plus heterotrimeric Sec61alpha-beta-gamma. Of the three forms of mammalian OST complexes identified, the OSTII complex has intermediate affinity for ribosomes.","definition_xrefs":["GOC:BHF","PMID:15835887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyltransferase complex","termid":"GO:0008250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005575","GO:0032991","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"oligosaccharyltransferase II complex","synonyms":[{"name":"OSTCII","type":"exact"}],"termid":"GO:0034999"}


id: PBO:0062251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BR member 1 pseudogene","termid":"PBO:0062251"}


id: PBO:0047572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 23","termid":"PBO:0047572"}


id: SO:0001658
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An NTR is a nested repeat of two distinct tandem motifs interspersed with each other.","definition_xrefs":["SO:AF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nested_repeat","termid":"SO:0001649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_tandem_repeat","synonyms":[{"name":"NTR","type":"exact"},{"name":"nested tandem repeat","type":"exact"}],"termid":"SO:0001658"}


id: PBO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma N","termid":"PBO:0043963"}


id: GO:1904147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:19260726","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonylphenol","termid":"GO:1904147"}


id: MOD:01857
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-methionine residue by a thioether bond to form 2-(L-cystein-S-yl)-methionine.","definition_xrefs":["PubMed:20805502","RESID:AA0559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(L-cystein-S-yl)-methionine","synonyms":[{"name":"(2R)-2-amino-2-([2-amino-2-carboxyethyl]sulfanyl)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-methionine","type":"exact"},{"name":"CROSSLNK 2-(S-cysteinyl)-methionine (Cys-Met)","type":"exact"}],"termid":"MOD:01857"}


id: GO:0015770
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sucrose transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015770","terms_by_termid":{"GO:0106082":null}}


id: PBO:0071869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 7","termid":"PBO:0071869"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: GO:0102800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3,5-di-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-(6-O-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"caffeoyl-CoA:pelargonidin-3,5-diglucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8138"],"termid":"GO:0102800"}


id: FYPO:0005226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell","type":"exact"},{"name":"decreased ubiquitinated protein level during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell","type":"exact"}],"termid":"FYPO:0005226"}


id: PBO:0047103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member B","termid":"PBO:0047103"}


id: GO:0010850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions within the cell that occur as a result of a single trigger reaction or compound interacting with a chemoreceptor resulting in a modulation of the force with which blood travels through the circulatory system. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of blood pressure by chemoreceptor signaling pathway","synonyms":[{"name":"regulation of blood pressure by chemoreceptor signalling pathway","type":"exact"}],"termid":"GO:0010850"}


id: GO:0102052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-proline + ATP(4-) = H+ + indole-3-acetyl-proline + AMP(2-) + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetyl-proline synthetase activity","secondary_identifiers":["MetaCyc:RXN-10434"],"termid":"GO:0102052"}


id: GO:0050204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxalomalate = glyoxylate + oxaloacetate.","definition_xrefs":["EC:4.1.3.13","RHEA:22032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"oxalomalate lyase activity","secondary_identifiers":["MetaCyc:OXALOMALATE-LYASE-RXN","KEGG_REACTION:R00477"],"synonyms":[{"name":"3-oxalomalate glyoxylate-lyase (oxaloacetate-forming)","type":"related"},{"name":"3-oxalomalate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0050204"}


id: GO:0140866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-20 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:34755534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-20-mediated signaling pathway","synonyms":[{"name":"IL-20-mediated signaling pathway","type":"exact"},{"name":"interleukin-20-mediated signalling pathway","type":"exact"}],"termid":"GO:0140866"}


id: GO:0061055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the myotome over time, from its formation to the mature structure. The myotome is the portion of the somite that will give rise to muscle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotome development","termid":"GO:0061055"}


id: GO:0072326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a nematode vulval cell regardless of its environment; upon determination, the cell fate cannot be reversed. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed adult vulva, which is the egg-laying organ of female and hermaphrodite nematodes.","definition_xrefs":["GOC:mah","GOC:kmv","PMID:11236714","ISBN:087969307X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"vulval cell fate commitment","termid":"GO:0072325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval cell fate determination","termid":"GO:0072326"}


id: PATO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperelliptic","termid":"PATO:0002322"}


id: GO:1905322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["PMID:26846297","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell migration","synonyms":[{"name":"activation of mesenchymal stem cell migration","type":"narrow"},{"name":"up regulation of mesenchymal stem cell migration","type":"exact"},{"name":"up-regulation of mesenchymal stem cell migration","type":"exact"},{"name":"upregulation of mesenchymal stem cell migration","type":"exact"}],"termid":"GO:1905322"}


id: GO:0002426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis and release of immunoglobulin in the mucosal tissue.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin production involved in immunoglobulin-mediated immune response","termid":"GO:0002381"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"immunoglobulin production in mucosal tissue","synonyms":[{"name":"antibody production in mucosal tissue","type":"exact"}],"termid":"GO:0002426"}


id: PBO:0083958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General amino acid permease; involved in uptake of all L-amino acids, some D-amino acids, related compounds, toxic analogs and polyamines; regulated by nitrogen source; targeted to vacuole for degradation under preferential nitrogen source; essential for invasive growth","termid":"PBO:0083958"}


id: PBO:0017848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght7 (predicted)","termid":"PBO:0017848"}


id: GO:1905933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:25793578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate determination","termid":"GO:1905933"}


id: PBO:0078637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 11","termid":"PBO:0078637"}


id: PBO:0045952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 8","termid":"PBO:0045952"}


id: GO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in leptotene or zygotene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"early recombination nodule","termid":"GO:0005714"}


id: PBO:0066805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 104","termid":"PBO:0066805"}


id: PBO:0108604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_negatively_regulates","termid":"PBO:0108604"}


id: GO:1900520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to pullulan","termid":"GO:1900518"},{"relation_name":"positively_regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to pullulan","synonyms":[{"name":"activation of response to pullulan","type":"narrow"},{"name":"up regulation of response to pullulan","type":"exact"},{"name":"up-regulation of response to pullulan","type":"exact"},{"name":"upregulation of response to pullulan","type":"exact"}],"termid":"GO:1900520"}


id: PBO:0060238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein C1","termid":"PBO:0060238"}


id: GO:0008563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + alpha-factor(in) = ADP + phosphate + alpha-factor(out). The export of the alpha-factor sex pheromone by an ABC-type (ATP-binding cassette-type) ATPase, characterized by the presence of two similar ATP-binding domains, that does not undergo phosphorylation during the transport process.","definition_xrefs":["EC:3.6.3.48"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor sex pheromone exporter (obsolete GO:0008563)","synonyms":[{"name":"alpha-factor sex pheromone exporter","type":"exact"},{"name":"alpha-factor-transporting ATPase","type":"related"}],"termid":"GO:0008563"}


id: PBO:0080355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 10, pseudogene","termid":"PBO:0080355"}


id: PATO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and mid-line surface of an organism relative to another entity.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteromedial to","termid":"PATO:0002449"}


id: GO:0033270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath.","definition_xrefs":["GOC:mah","GOC:mh","NIF_Subcellular:sao936144858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"paranode region of axon","secondary_identifiers":["NIF_Subcellular:sao234066064"],"synonyms":[{"name":"paranode","type":"exact"}],"termid":"GO:0033270"}


id: FYPO:0007047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal alkaline phosphatase activity","termid":"FYPO:0007047"}


id: PBO:0079756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocortin 2","termid":"PBO:0079756"}


id: PBO:0046706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 5","termid":"PBO:0046706"}


id: PBO:0057528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 645","termid":"PBO:0057528"}


id: GO:1904315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any transmitter-gated ion channel activity that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["PMID:20200227","GOC:TermGenie","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ionotropic neurotransmitter receptor activity involved in regulation of post-synaptic membrane potential","type":"narrow"},{"name":"ionotropic neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","type":"narrow"},{"name":"transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential","type":"broad"}],"termid":"GO:1904315"}


id: PBO:0051100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-3","termid":"PBO:0051100"}


id: PR:O74867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.17c gene.","definition_xrefs":["UniProtKB:O74867","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.17c","synonyms":[{"name":"Spom972h-SPCC18.17c","type":"exact"}],"termid":"PR:O74867"}


id: PBO:0054923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2337","termid":"PBO:0054923"}


id: FYPO:0000778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of double-strand break repair","synonyms":[{"name":"delayed double-strand break repair","type":"exact"},{"name":"delayed onset of double-strand break repair during mitotic cell cycle","type":"related"},{"name":"delayed onset of double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0000778"}


id: GO:1901647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synoviocyte proliferation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of synoviocyte proliferation","termid":"GO:1901645"},{"relation_name":"positively_regulates","term_name":"synoviocyte proliferation","termid":"GO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synoviocyte proliferation","synonyms":[{"name":"activation of synoviocyte proliferation","type":"narrow"},{"name":"up regulation of synoviocyte proliferation","type":"exact"},{"name":"up-regulation of synoviocyte proliferation","type":"exact"},{"name":"upregulation of synoviocyte proliferation","type":"exact"}],"termid":"GO:1901647"}


id: GO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octanol, the 8-carbon alcohol with the formula C8H17OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanol metabolic process","termid":"GO:0006070"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"octanol biosynthetic process","synonyms":[{"name":"octanol anabolism","type":"exact"},{"name":"octanol biosynthesis","type":"exact"},{"name":"octanol formation","type":"exact"},{"name":"octanol synthesis","type":"exact"}],"termid":"GO:0046171"}


id: GO:0035366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"negatively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thymine transport","synonyms":[{"name":"negative regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035366"}


id: GO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling dorso-laterally into the ectoderm and continuing toward the ventral midline of the belly. These migrating trunk neural crest cells become melanocytes, the melanin-forming pigment cells.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:mat","PMID:2387238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsolateral trunk neural crest cell migration","synonyms":[{"name":"dorsolateral trunk NCC migration","type":"exact"}],"termid":"GO:0036485"}


id: PBO:0089267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2","termid":"PBO:0089267"}


id: GO:0034967
data:
  {"annotated_genes":["SJAG_04186","SJAG_04396","SJAG_01926","SJAG_04389","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89375,89410,93399,100359,110318],"is_not":false,"summary":null,"term":"GO:0034967"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex that is involved in transcriptional regulation. In S. cerevisiae, this complex consists of Set3p, Snt1p, Hos4p, Sif2p, Cpr1p, Hos2p, and Hst1p.","definition_xrefs":["PMID:11711434","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_03627":null,"SJAG_04186":null,"SJAG_04389":null,"SJAG_04396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005694","GO:0005654"],"is_obsolete":false,"name":"Set3 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HDAC3 complex","type":"exact"},{"name":"SET3C","type":"exact"}],"termid":"GO:0034967","terms_by_termid":{"GO:0034967":null}}


id: PBO:0054643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2048","termid":"PBO:0054643"}


id: PBO:0057720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-5","termid":"PBO:0057720"}


id: GO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine + H+ = 2-methylcholine + CO2.","definition_xrefs":["EC:4.1.1.42","RHEA:21576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carnitine decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02398","MetaCyc:CARNITINE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"carnitine carboxy-lyase (2-methylcholine-forming)","type":"related"},{"name":"carnitine carboxy-lyase activity","type":"related"}],"termid":"GO:0047729"}


id: GO:0102234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: buten-2-one + NADPH + H+ = butan-2-one + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete but-1-en-3-one reductase activity (obsolete GO:0102234)","secondary_identifiers":["MetaCyc:RXN-12293"],"termid":"GO:0102234"}


id: PBO:0108515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor, Clr6 and Rpd3L histone deacetylase subunit Pst3","termid":"PBO:0108515"}


id: GO:0075346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism adds one or more ubiquitin groups to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein by ubiquitination (obsolete GO:0075346)","synonyms":[{"name":"modification by symbiont of host protein by ubiquitinylation","type":"exact"},{"name":"modification by symbiont of host protein by ubiquitylation","type":"exact"}],"termid":"GO:0075346"}


id: FYPO:0007142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability following cellular response to ionizing radiation","synonyms":[{"name":"decreased viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of cell population viability following cellular response to ionizing radiation","type":"exact"},{"name":"loss of viability following cellular response to IR","type":"exact"},{"name":"loss of viability following cellular response to gamma radiation","type":"narrow"},{"name":"loss of viability following ionizing radiation exposure","type":"exact"},{"name":"reduced viability following cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0007142"}


id: MOD:01187
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an L-pyrrolysine residue, a natural pretranslational modification.","definition_xrefs":["PubMed:12029132","Unimod:435","ChEBI:21860","PubMed:12029131","PubMed:11435424","RESID:AA0321","PubMed:16096277","PubMed:15314242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine residue","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:01187"}


id: PBO:0005835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human THADA ortholog","termid":"PBO:0005835"}


id: PBO:0051753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 2","termid":"PBO:0051753"}


id: GO:2000441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 15 signaling pathway","termid":"GO:2000440"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"negative regulation of TLR15 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000441"}


id: PBO:0030898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulation_phenotype_during_vegetative_growth","termid":"PBO:0030898"}


id: PBO:0024807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to","termid":"PBO:0024807"}


id: GO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube morphogenesis","termid":"GO:0060562"}


id: PBO:0057396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-4","termid":"PBO:0057396"}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: PBO:0028462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_lemon-shaped_cell","termid":"PBO:0028462"}


id: PBO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_MCB_promoter","termid":"PBO:0032728"}


id: PBO:0004154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Caj1/Djp1-type (predicted)","termid":"PBO:0004154"}


id: GO:1902320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA duplex unwinding that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication DNA unwinding","termid":"GO:1902297"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"nuclear DNA replication DNA duplex unwinding","synonyms":[{"name":"DNA duplex unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA duplex unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA duplex unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA duplex unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA unwinding involved in DNA replication during S phase","type":"related"},{"name":"DNA unwinding involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA unwinding involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA unwinding involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"duplex DNA melting involved in DNA replication during S phase","type":"related"},{"name":"duplex DNA melting involved in DNA replication involved in S phase","type":"exact"},{"name":"duplex DNA melting involved in DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902320"}


id: GO:1905307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a miconazole stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to miconazole","termid":"GO:1905307"}


id: PBO:0050231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 9","termid":"PBO:0050231"}


id: GO:0033684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"}


id: GO:0034916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylhexanoyl-CoA = 2-methylhex-2-enoyl-CoA + 2 H+ + e-.","definition_xrefs":["UM-BBD_reactionID:r0928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-methylhexanoyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.99.-"],"termid":"GO:0034916"}


id: FYPO:0006134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-palmitoleoylglycerophosphoinositol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:28667014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 2-palmitoleoylglycerophosphoinositol level","synonyms":[{"name":"increased 2-palmitoleoylglycerophosphoinositol accumulation","type":"related"},{"name":"increased cellular 2-palmitoleoyl-sn-glycero-3-phospho-D-myo-inositol level during vegetative growth","type":"exact"},{"name":"increased cellular 2-palmitoleoylglycerophosphoinositol level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-palmitoleoylglycerophosphoinositol level during vegetative growth","type":"exact"}],"termid":"FYPO:0006134"}


id: GO:0019292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate 4-hydroxyphenylpyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","secondary_identifiers":["MetaCyc:TYRSYN"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine biosynthetic process from chorismate via p-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine formation from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","type":"broad"}],"termid":"GO:0019292"}


id: MOD:01233
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(2)H labeled N6-acetyl-L-lysine.","definition_xrefs":["PubMed:11999733","Unimod:56#K","PubMed:12175151","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acetyl-L-lysine","termid":"MOD:00064"},{"relation_name":"is_a","term_name":"acetate labeling reagent (N-term) (heavy form, +3amu)","termid":"MOD:00449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"3x(2)H labeled N6-acetyl-L-lysine","synonyms":[{"name":"Acetate labeling reagent (N-term & K) (heavy form, +3amu)","type":"related"},{"name":"Acetyl:2H(3)","type":"related"}],"termid":"MOD:01233"}


id: GO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate metabolic process","synonyms":[{"name":"3-(3-hydroxy)phenylpropionate metabolism","type":"exact"}],"termid":"GO:0046435"}


id: GO:0071930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stop, prevents or decreases transcription as part of the G1/S transition of the mitotic cell cycle.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription involved in G1/S transition of mitotic cell cycle (obsolete GO:0071930)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter during G1/S phase of mitotic cell cycle","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0071930"}


id: PBO:0053268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A2","termid":"PBO:0053268"}


id: PBO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 12","termid":"PBO:0048827"}


id: PBO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 15 receptor subunit alpha","termid":"PBO:0051570"}


id: GO:0030497
data:
  {"annotated_genes":["SJAG_01300","SJAG_00630","SJAG_01356","SJAG_02717","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94376,102049,107500],"is_not":false,"summary":null,"term":"GO:0030497"},{"annotations":[88124,85708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[85709,88125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"}]},"cv_name":"biological_process","definition":"The elongation of a fatty acid chain by the sequential addition of two-carbon units.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00630":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fatty acid elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030497","terms_by_termid":{"GO:0019367":null,"GO:0030497":null,"GO:0034625":null}}


id: PBO:0002955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rnp24","termid":"PBO:0002955"}


id: PBO:0085252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; mediates Sey1p-independent homotypic ER fusion; forms Dsl1 tethering complex with Sec39p and Tip20p that forms a stable complex with ER SNAREs Sec20p, Ufe1p and Use1p and is functionally conserved from yeast to mammalian cells; component of the ER target site that interacts with coatomer; interacts with different subunits of COPI vesicle coat; interacts with Cin5p; homolog of fly and human ZW10 gene","termid":"PBO:0085252"}


id: PBO:0045519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"denticleless E3 ubiquitin protein ligase homolog","termid":"PBO:0045519"}


id: FYPO:0009113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle polar microtubules during anaphase B does not occur.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle polar microtubules during anaphase B","synonyms":[{"name":"abolished protein localisation to interpolar microtubules during mitotic anaphase B","type":"exact"},{"name":"abolished protein localisation to mitotic spindle polar microtubules during anaphase B","type":"exact"},{"name":"abolished protein localization to interpolar microtubules during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0009113"}


id: PBO:0090758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2","termid":"PBO:0090758"}


id: GO:0071319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to benzoic acid","termid":"GO:0080021"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to benzoic acid","termid":"GO:0071319"}


id: PBO:0076337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 5","termid":"PBO:0076337"}


id: PBO:0074833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28B","termid":"PBO:0074833"}


id: GO:0034942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-methyl-5-isopropylhexa-2,5-dienoic acid + ATP + CoASH = cis-2-methyl-5-isopropylhexa-2,5-dienoyl-CoA + AMP + PPi.","definition_xrefs":["UM-BBD_reactionID:r0988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-2-methyl-5-isopropylhexa-2,5-dienoate-CoA ligase activity","termid":"GO:0034942"}


id: PBO:0064121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 1, transient receptor potential cation channel","termid":"PBO:0064121"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11420311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: GO:0004957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin E receptor activity","synonyms":[{"name":"PGE receptor activity","type":"related"},{"name":"PGE(2) receptor activity","type":"exact"}],"termid":"GO:0004957"}


id: PBO:0079521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRO3 protein tyrosine kinase","termid":"PBO:0079521"}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94705],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["EC:2.1.1.10","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN","RHEA:21820"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: PBO:0044052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 3","termid":"PBO:0044052"}


id: PBO:0082657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; involved intranscription initiation and elongation and in mRNA degradation; conserved lysine in human homolog of Not5p and Not3p is mutated in cancers","termid":"PBO:0082657"}


id: PBO:0073435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b, subunit 4 pseudogene 1","termid":"PBO:0073435"}


id: PBO:0087696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; interacts with Spp1p and with trimethylated histone H3; phosphorylated by Cdc28p","termid":"PBO:0087696"}


id: PBO:0112231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Rtf2","termid":"PBO:0112231"}


id: GO:0007136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of meiosis II and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prophase","termid":"GO:0051324"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic prophase II","termid":"GO:0007136"}


id: PR:000027512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-phase inducer phosphatase phosphorylated 1 in Schizosaccharomyces pombe. This form is produced by phosphorylation by Cds1 or Chk1 during replication checkpoint. Example: UniProtKB:P06652-1, Ser-99/Ser-192/Ser-359, MOD:00046.","definition_xrefs":["PMID:9774107","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-phase inducer phosphatase","termid":"PR:000027506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc25/Phos(S99,S192,S359)","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"Spom-cdc25/Phos:1","type":"exact"},{"name":"cdc25/Phos(S99,S192,S359)","type":"exact"}],"termid":"PR:000027512"}


id: PBO:0049234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM5 pseudogene 1","termid":"PBO:0049234"}


id: PBO:0083015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defining member of the SET3 histone deacetylase complex; which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains; SET3 has a paralog, SET4, that arose from the whole genome duplication","termid":"PBO:0083015"}


id: PBO:0013830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T, Gpi16 (predicted)","termid":"PBO:0013830"}


id: PBO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_assembly","termid":"PBO:0031254"}


id: PBO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 9","termid":"PBO:0071645"}


id: GO:0000055
data:
  {"annotated_genes":["SJAG_01065","SJAG_00753","SJAG_01358","SJAG_03719","SJAG_03496","SJAG_03882","SJAG_00178","SJAG_01391","SJAG_04308"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85988,87273,95803,98042,99174,101913,112393,113808,114312],"is_not":false,"summary":null,"term":"GO:0000055"}]},"cv_name":"biological_process","definition":"The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00753":null,"SJAG_01065":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_03496":null,"SJAG_03719":null,"SJAG_03882":null,"SJAG_04308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0051179","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"ribosomal large subunit export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000057"],"synonyms":[{"name":"50S ribosomal subunit export from nucleus","type":"narrow"},{"name":"60S ribosomal subunit export from nucleus","type":"narrow"},{"name":"ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"ribosomal large subunit export out of nucleus","type":"exact"},{"name":"ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:0000055","terms_by_termid":{"GO:0000055":null}}


id: PBO:0079631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 1","termid":"PBO:0079631"}


id: PBO:0058532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6077","termid":"PBO:0058532"}


id: GO:1902207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11909529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"positively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"activation of IL-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902207"}


id: GO:0050924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of negative chemotaxis","termid":"GO:0050923"},{"relation_name":"positively_regulates","term_name":"negative chemotaxis","termid":"GO:0050919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of negative chemotaxis","synonyms":[{"name":"activation of negative chemotaxis","type":"narrow"},{"name":"stimulation of negative chemotaxis","type":"narrow"},{"name":"up regulation of negative chemotaxis","type":"exact"},{"name":"up-regulation of negative chemotaxis","type":"exact"},{"name":"upregulation of negative chemotaxis","type":"exact"}],"termid":"GO:0050924"}


id: PBO:0060718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A7","termid":"PBO:0060718"}


id: PBO:0051508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKE antisense RNA 1","termid":"PBO:0051508"}


id: PBO:0085801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains transmembrane domains; involved in secretion of proteins that lack classical secretory signal sequences; component of the detergent-insoluble glycolipid-enriched complexes (DIGs); NCE102 has a paralog, FHN1, that arose from the whole genome duplication","termid":"PBO:0085801"}


id: PBO:0039974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 5","termid":"PBO:0039974"}


id: PBO:0047180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member A","termid":"PBO:0047180"}


id: PBO:0047603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2B","termid":"PBO:0047603"}


id: GO:0036386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which chromosomal DNA and associated proteins organize into a compact, orderly bacterial nucleoid. Often resulting in DNA supercoiling.","definition_xrefs":["GOC:bhm","GOC:bf","PMID:17097674","PMID:17360520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial nucleoid packaging","synonyms":[{"name":"bacterial nucleoid DNA packaging","type":"exact"},{"name":"chromosomal compaction","type":"broad"},{"name":"nucleoid compaction","type":"broad"},{"name":"prokaryotic DNA condensation","type":"broad"}],"termid":"GO:0036386"}


id: PBO:0075916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 8","termid":"PBO:0075916"}


id: PBO:0056992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 33b","termid":"PBO:0056992"}


id: PR:P0CT66
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1801 gene.","definition_xrefs":["UniProtKB:P0CT66","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.11c","synonyms":[{"name":"Spom972h-rps1801","type":"exact"}],"termid":"PR:P0CT66"}


id: FYPO:0008166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome does not occur during prometaphase of mitosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008166"}


id: PBO:0028312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_protein_coding_gene","termid":"PBO:0028312"}


id: PBO:0076745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex-associated-testis-expressed 1","termid":"PBO:0076745"}


id: GO:0140996
data:
  {"annotated_genes":["SJAG_00678","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035175"},{"annotations":[90019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072354"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H3.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0004672","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"histone H3 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140996","terms_by_termid":{"GO:0035175":null,"GO:0072354":null}}


id: PR:Q9US42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- urg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein urg3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.18","synonyms":[{"name":"Spom972h-urg3","type":"exact"}],"termid":"PR:Q9US42"}


id: GO:0009190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cyclic nucleotide biosynthetic process","synonyms":[{"name":"cyclic nucleotide anabolism","type":"exact"},{"name":"cyclic nucleotide biosynthesis","type":"exact"},{"name":"cyclic nucleotide formation","type":"exact"},{"name":"cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0009190"}


id: GO:0019334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"p-cymene metabolic process","termid":"GO:0018953"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"p-cymene catabolic process","secondary_identifiers":["MetaCyc:PWY-741"],"synonyms":[{"name":"p-cymene breakdown","type":"exact"},{"name":"p-cymene catabolism","type":"exact"},{"name":"p-cymene degradation","type":"exact"}],"termid":"GO:0019334"}


id: PBO:0028928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_orientation","termid":"PBO:0028928"}


id: PBO:0067431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 552, pseudogene","termid":"PBO:0067431"}


id: PBO:0005838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase (predicted)","termid":"PBO:0005838"}


id: PBO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase Ats1 (predicted)","termid":"PBO:0001193"}


id: PBO:0077038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 6","termid":"PBO:0077038"}


id: PBO:0048832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma transducin 2","termid":"PBO:0048832"}


id: SO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A change in chromosomes that occurs between two separate chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_variation_attribute","termid":"SO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal","termid":"SO:0001510"}


id: FYPO:0002462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002461"],"synonyms":[{"name":"inviable branched cell during vegetative growth","type":"exact"},{"name":"inviable branched vegetative cell","type":"exact"},{"name":"inviable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, septated cell","type":"exact"},{"name":"inviable branched, long, septated cell","type":"exact"},{"name":"inviable branched, septated cell","type":"exact"},{"name":"inviable elongated branched cell","type":"exact"},{"name":"lethal; branched, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002462"}


id: FYECO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CdSO4","synonyms":[{"name":"+ cadmium sulfate","type":"related"}],"termid":"FYECO:0000247"}


id: GO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"},{"relation_name":"is_a","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle","synonyms":[{"name":"clathrin coating of Golgi-derived vesicle","type":"exact"}],"termid":"GO:0048202"}


id: PBO:0027189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring","termid":"PBO:0027189"}


id: PBO:0043642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 4","termid":"PBO:0043642"}


id: PBO:0077741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOB1 antisense RNA 1","termid":"PBO:0077741"}


id: GO:1903565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["PMID:22072986","GO_REF:0000058","GOC:krc","GOC:cilia","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cilium","synonyms":[{"name":"down regulation of protein localization to cilium","type":"exact"},{"name":"down-regulation of protein localization to cilium","type":"exact"},{"name":"downregulation of protein localization to cilium","type":"exact"},{"name":"inhibition of protein localization to cilium","type":"narrow"}],"termid":"GO:1903565"}


id: PBO:0064436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1 pseudogene 1","termid":"PBO:0064436"}


id: GO:2000102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mammary stem cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of mammary stem cell proliferation","termid":"GO:2000101"},{"relation_name":"negatively_regulates","term_name":"mammary stem cell proliferation","termid":"GO:0002174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary stem cell proliferation","termid":"GO:2000102"}


id: GO:0032644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of fractalkine production","secondary_identifiers":["GO:0050752"],"synonyms":[{"name":"regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"regulation of CX3CL1 production","type":"narrow"},{"name":"regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032644"}


id: PBO:0004781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 5 (predicted)","termid":"PBO:0004781"}


id: GO:0140804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + NAD+ = H+ + N(6)-(ADP-D-ribosyl)-L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:25043379","RHEA:58220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"NAD+- protein-lysine ADP-ribosyltransferase activity","termid":"GO:0140804"}


id: PBO:0047399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 38","termid":"PBO:0047399"}


id: FYPO:0005177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the modification of a wobble base uridine residue in a tRNA to 2-thiouridine is abolished.","definition_xrefs":["GO:0003143","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"abolished tRNA wobble position uridine thiolation","synonyms":[{"name":"abolished tRNA wobble position uridine thiolation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA wobble position uridine thiolation during vegetative growth","type":"exact"},{"name":"abolished wobble position s2U biosynthesis","type":"exact"},{"name":"tRNA wobble position uridine thiolation abolished","type":"exact"}],"termid":"FYPO:0005177"}


id: PBO:0039999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 11","termid":"PBO:0039999"}


id: MOD:00986
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl and (37)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00986"}


id: PBO:0049259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goosecoid homeobox","termid":"PBO:0049259"}


id: PBO:0052011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 1C","termid":"PBO:0052011"}


id: GO:0032402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of melanosomes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanosome localization","termid":"GO:0032400"},{"relation_name":"is_a","term_name":"establishment of melanosome localization","termid":"GO:0032401"},{"relation_name":"is_a","term_name":"pigment granule transport","termid":"GO:0051904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"melanosome transport","termid":"GO:0032402"}


id: GO:0021898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial commitment of cells whereby the developmental fate of a cell becomes restricted such that it will develop into some type of neuron in the forebrain.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron fate commitment","termid":"GO:0021877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}


id: FYPO:0003890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis is abnormal. Primary cell septum biogenesis results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of the primary cell septum during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"abnormal primary cell septum biogenesis","synonyms":[{"name":"abnormal primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"abnormal primary cell septum formation","type":"related"},{"name":"abnormal primary cell septum synthesis","type":"related"},{"name":"abnormal primary septum biogenesis","type":"exact"}],"termid":"FYPO:0003890"}


id: PBO:0055680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase I","termid":"PBO:0055680"}


id: FYECO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which isoleucine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ile","synonyms":[{"name":"isoleucine added","type":"exact"}],"termid":"FYECO:0000405"}


id: PBO:0005553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin","termid":"PBO:0005553"}


id: PBO:0073932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 5","termid":"PBO:0073932"}


id: PBO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD1 antisense RNA 1","termid":"PBO:0046364"}


id: SO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed, resulting in a premature stop codon, leading to a shortened polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","loinc:LA6699-8","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://vat.gersteinlab.org/formats.php","http://ensembl.org/info/genome/variation/prediction/predicted_data.html"],"synonyms":[{"name":"ANNOVAR:stopgain","type":"exact"},{"name":"Jannovar:stop_gained","type":"exact"},{"name":"Seattleseq:stop-gained","type":"exact"},{"name":"Seattleseq:stop-gained-near-splice","type":"related"},{"name":"VAAST:stop_gained","type":"exact"},{"name":"VAT:prematureStop","type":"exact"},{"name":"VEP:stop_gained","type":"exact"},{"name":"nonsense","type":"exact"},{"name":"nonsense codon","type":"exact"},{"name":"snpEff:STOP_GAINED","type":"exact"},{"name":"stop codon gained","type":"related"},{"name":"stop gained","type":"exact"}],"termid":"SO:0001587"}


id: GO:0098917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from post to pre-synapse, across the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling","termid":"GO:0098917"}


id: PBO:0038886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activating polypeptide 1","termid":"PBO:0038886"}


id: PBO:0063709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 3","termid":"PBO:0063709"}


id: PBO:0024861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family Abh1","termid":"PBO:0024861"}


id: PBO:0090103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit B-56 Par2","termid":"PBO:0090103"}


id: PBO:0044089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A9","termid":"PBO:0044089"}


id: GO:2001127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a formic acid.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}


id: GO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hypertrophy","termid":"GO:0014743"}


id: FYPO:0007235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at early replication origins (i.e. origins that normally fire early in S phase) is decreased.","definition_xrefs":["PMID:22279046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at replication origin","termid":"FYPO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at early replication origin","synonyms":[{"name":"decreased protein localisation to chromatin at early replication origin","type":"exact"},{"name":"decreased protein localization to chromatin at early origin","type":"exact"},{"name":"decreased protein localization to chromatin at early replication origin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to early replication origin during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at early replication origin","type":"exact"}],"termid":"FYPO:0007235"}


id: PBO:0058350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4723","termid":"PBO:0058350"}


id: PR:Q09841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01803","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.07","secondary_identifiers":["UniProtKB:Q09841"],"synonyms":[{"name":"Spom972h-PSMB7","type":"exact"}],"termid":"PR:Q09841"}


id: GO:0051953
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"negatively_regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of amine transport","type":"exact"},{"name":"down-regulation of amine transport","type":"exact"},{"name":"downregulation of amine transport","type":"exact"},{"name":"inhibition of amine transport","type":"narrow"}],"termid":"GO:0051953","terms_by_termid":{"GO:1905533":null}}


id: PBO:0053487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 462","termid":"PBO:0053487"}


id: GO:0031355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid outer membrane (obsolete GO:0031355)","synonyms":[{"name":"integral to plastid outer membrane","type":"narrow"}],"termid":"GO:0031355"}


id: SO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic constant region of an immunoglobulin gene which closely resembles a known functional Imunoglobulin constant gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_C_pseudogene","synonyms":[{"name":"IG C pseudogene","type":"exact"}],"termid":"SO:0002100"}


id: GO:0070113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, of the two lipid bilayers surrounding an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar chromatophore membrane","termid":"GO:0070112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"organellar chromatophore inner membrane","synonyms":[{"name":"Paulinella-type chromatophore inner membrane","type":"exact"}],"termid":"GO:0070113"}


id: GO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oxytocin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"oxytocin receptor binding","synonyms":[{"name":"oxytocin receptor ligand","type":"narrow"}],"termid":"GO:0031855"}


id: GO:0072704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mercaptoethanol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mercaptoethanol","synonyms":[{"name":"response to 2-sulfanylethanol","type":"exact"}],"termid":"GO:0072704"}


id: SO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_trimethylation_site","synonyms":[{"name":"H3K9 tri-methylation site","type":"exact"},{"name":"H3K9Me3","type":"related"}],"termid":"SO:0001707"}


id: PBO:0039784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 11","termid":"PBO:0039784"}


id: PBO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A7","termid":"PBO:0044099"}


id: PBO:0029879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029879"}


id: GO:0120267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the pellicle, a structure enclosing some parasite cells such as certain apicomplexa and Euglenozoa. These membranes are associated with an infrastructure of microtubules, microfilaments, and other organelles.","definition_xrefs":["PMID:6993644","PMID:7175771","PMID:18095354","GOC:ach","PMID:30550896","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"pellicular membrane","synonyms":[{"name":"pellicle membrane","type":"exact"},{"name":"pellicular plasma membrane","type":"exact"}],"termid":"GO:0120267"}


id: PBO:0034095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_develops_into","termid":"PBO:0034095"}


id: FYPO:0005511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects any meiotic cell cycle checkpoint.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"},{"relation_name":"is_a","term_name":"signal transduction phenotype","termid":"FYPO:0003478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint phenotype","synonyms":[{"name":"fission yeast meiotic cell cycle checkpoint phenotype","type":"exact"}],"termid":"FYPO:0005511"}


id: PBO:0047457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 1","termid":"PBO:0047457"}


id: PBO:0048418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 6","termid":"PBO:0048418"}


id: PBO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1","termid":"PBO:0042892"}


id: PBO:0011479
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae STT3","termid":"PBO:0011479"}


id: GO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling","synonyms":[{"name":"endodermal-mesodermal cell signalling","type":"exact"}],"termid":"GO:0003133"}


id: PBO:0066187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 10","termid":"PBO:0066187"}


id: PBO:0049822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine decarboxylase","termid":"PBO:0049822"}


id: GO:0008412
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94569],"is_not":false,"summary":null,"term":"GO:0008412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesylfarnesylgeranyl diphosphate + p-hydroxybenzoate = 3-octaprenyl-4-hydroxybenzoate + diphosphate.","definition_xrefs":["RHEA:27782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyltransferase activity","termid":"GO:0002094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate octaprenyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.5.1.39","GO:0048044","MetaCyc:4OHBENZOATE-OCTAPRENYLTRANSFER-RXN","GO:0000043","GO:0048043"],"synonyms":[{"name":"4-HB polyprenyltransferase activity","type":"exact"},{"name":"PHB polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate-polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate:polyprenyltransferase activity","type":"exact"}],"termid":"GO:0008412","terms_by_termid":{"GO:0008412":null}}


id: PBO:0068169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 476","termid":"PBO:0068169"}


id: PBO:0070370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 8","termid":"PBO:0070370"}


id: GO:1900942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900939"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"negatively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"down regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"inhibition of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900942"}


id: PR:O13823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar ribonucleoprotein protein IMP4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01033","PANTHER:PTHR22734:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar ribonucleoprotein protein imp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.07c","secondary_identifiers":["UniProtKB:O13823"],"synonyms":[{"name":"Spom972h-IMP4","type":"exact"},{"name":"U3 snoRNP protein imp4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13823"}


id: PBO:0060360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoferlin","termid":"PBO:0060360"}


id: PR:Q10361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- etp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.10c","synonyms":[{"name":"Spom972h-etp1","type":"exact"}],"termid":"PR:Q10361"}


id: PBO:0069690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 969, pseudogene","termid":"PBO:0069690"}


id: GO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythm of the locomotor activity of an organism during its 24 hour activity cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotor rhythm","synonyms":[{"name":"circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:0045475"}


id: PBO:0075937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 2","termid":"PBO:0075937"}


id: PBO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U3","termid":"PBO:0016902"}


id: PBO:0073257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 1","termid":"PBO:0073257"}


id: PBO:0070020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1317, pseudogene","termid":"PBO:0070020"}


id: PBO:0087580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the anaphase-promoting complex/cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; required for sporulation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087580"}


id: PBO:0041329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 83","termid":"PBO:0041329"}


id: PBO:0041126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7 pseudogene 2","termid":"PBO:0041126"}


id: PBO:0086283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in 5'-end processing of mitochondrial RNAs; located in the mitochondrial membrane","termid":"PBO:0086283"}


id: GO:0033905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->3)-beta-D-glycosidic linkages in (1->3)-beta-D-xylans.","definition_xrefs":["EC:3.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"xylan endo-1,3-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.32-RXN"],"synonyms":[{"name":"xylanase activity","type":"broad"},{"name":"1,3-beta-D-xylan xylanohydrolase activity","type":"related"},{"name":"1,3-beta-xylanase activity","type":"related"},{"name":"1,3-xylanase activity","type":"related"},{"name":"beta-1,3-xylanase activity","type":"related"},{"name":"endo-1,3-beta-xylanase activity","type":"related"},{"name":"endo-1,3-xylanase activity","type":"related"},{"name":"endo-beta-1,3-xylanase activity","type":"related"}],"termid":"GO:0033905"}


id: GO:0045317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation and development of the equator that forms the boundary between the photoreceptors in the dorsal sector of the eye and those in the ventral sector, dividing the eye into dorsal and ventral halves.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"equator specification","termid":"GO:0045317"}


id: GO:1903055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["PMID:22357537","GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"positively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix organization","synonyms":[{"name":"activation of extracellular matrix organisation","type":"narrow"},{"name":"activation of extracellular matrix organization","type":"narrow"},{"name":"activation of extracellular matrix organization and biogenesis","type":"related"},{"name":"positive regulation of extracellular matrix organisation","type":"exact"},{"name":"positive regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up regulation of extracellular matrix organisation","type":"exact"},{"name":"up regulation of extracellular matrix organization","type":"exact"},{"name":"up regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up-regulation of extracellular matrix organisation","type":"exact"},{"name":"up-regulation of extracellular matrix organization","type":"exact"},{"name":"up-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"upregulation of extracellular matrix organisation","type":"exact"},{"name":"upregulation of extracellular matrix organization","type":"exact"},{"name":"upregulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903055"}


id: PBO:0048567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamylcyclotransferase","termid":"PBO:0048567"}


id: PBO:0059701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 9","termid":"PBO:0059701"}


id: GO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory vesicle membrane (obsolete GO:0005804)","synonyms":[{"name":"secretory vesicle membrane","type":"exact"}],"termid":"GO:0005804"}


id: PBO:0054999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2414","termid":"PBO:0054999"}


id: PBO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-1","termid":"PBO:0051424"}


id: GO:0035313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an epidermal cell along or through a wound gap that contributes to the reestablishment of a continuous epidermis.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wound healing, spreading of cells","termid":"GO:0044319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}


id: GO:2000084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000084"}


id: GO:0008982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sugar(out) = protein histidine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","secondary_identifiers":["GO:0015456","GO:0015455","TC:4.A"],"synonyms":[{"name":"PEP--sugar phosphotransferase enzyme II activity","type":"exact"},{"name":"PEP-dependent phosphotransferase enzyme II","type":"related"},{"name":"PTS permease activity","type":"related"},{"name":"PTS transporter","type":"related"},{"name":"enzyme II of the phosphotransferase system","type":"related"},{"name":"phosphoenolpyruvate-sugar phosphotransferase enzyme II","type":"related"},{"name":"phosphohistidinoprotein-hexose phosphotransferase activity","type":"related"},{"name":"phosphoprotein factor-hexose phosophotransferase activity","type":"related"},{"name":"phosphotransfer-driven group translocator","type":"broad"},{"name":"protein-Np-phosphohistidine-sugar phosphotransferase activity","type":"exact"}],"termid":"GO:0008982"}


id: FYPO:0003036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to ultraviolet light. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"normal transcription during cellular response to UV","synonyms":[{"name":"normal transcription during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003036"}


id: PBO:0024860
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex binds a 3' single-stranded DNA overhang and translocates along an DNA/RNA duplex in the 3' to 5' direction","termid":"PBO:0024860"}


id: PBO:0073231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SENP3-EIF4A1 readthrough (NMD candidate)","termid":"PBO:0073231"}


id: PBO:0066993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 296","termid":"PBO:0066993"}


id: GO:0004471
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114630],"is_not":false,"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.","definition_xrefs":["EC:1.1.1.39","EC:1.1.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malic enzyme activity","termid":"GO:0004470"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"malate dehydrogenase (decarboxylating) (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:12653","KEGG_REACTION:R00214","MetaCyc:1.1.1.39-RXN","GO:0004472","GO:0016619","Reactome:R-HSA-9012268"],"synonyms":[{"name":"'malic' enzyme","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating)","type":"related"},{"name":"NAD-linked malic enzyme","type":"related"},{"name":"NAD-malic enzyme activity","type":"broad"},{"name":"NAD-specific malic enzyme","type":"related"},{"name":"malate dehydrogenase (decarboxylating) activity","type":"related"},{"name":"malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"GO:0004471","terms_by_termid":{"GO:0004471":null}}


id: GO:0007365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides the spatial regions of an embryo into serially repeated regions.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning","termid":"GO:0007365"}


id: GO:0010967
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107354],"is_not":false,"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010967","terms_by_termid":{"GO:0010967":null}}


id: PBO:0110317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 5'-cap (guanine-N7-)-methyltransferase Pcm1","termid":"PBO:0110317"}


id: PBO:0082471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-dependent protein kinase; negative feedback controller of calcium/calcineurin signalling pathway, also has additional Crz1-independent role in promoting calcium tolerance; amino acid sequence similar to mammalian Cam Kinase II; CMK2 has a paralog, CMK1, that arose from the whole genome duplication","termid":"PBO:0082471"}


id: GO:0047923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydroxybenzoate + H+ = CO2 + hydroquinone.","definition_xrefs":["RHEA:21312","EC:4.1.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"gentisate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02489","MetaCyc:GENTISATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"2,5-dihydroxybenzoate carboxy-lyase (hydroquinone-forming)","type":"related"},{"name":"2,5-dihydroxybenzoate decarboxylase activity","type":"related"},{"name":"gentisate carboxy-lyase activity","type":"related"}],"termid":"GO:0047923"}


id: GO:1903777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to melibiose.","definition_xrefs":["PMID:11471732","GOC:mr","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"melibiose binding","termid":"GO:1903777"}


id: PBO:0085449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to bacterial Hsp31 and yeast Hsp31p, Hsp32p, and Hsp33p; DJ-1/ThiJ/PfpI superfamily member; predicted involvement in pyridoxine metabolism; induced by mild heat stress and copper deprivation","termid":"PBO:0085449"}


id: FYPO:0006518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering G0 phase.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nitrogen starvation","termid":"FYPO:0001178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability in G0","synonyms":[{"name":"loss of viability in cell quiescence","type":"exact"},{"name":"loss of viability in quiescence","type":"exact"}],"termid":"FYPO:0006518"}


id: PBO:0055577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3013","termid":"PBO:0055577"}


id: PBO:0110232
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudo HisTone","termid":"PBO:0110232"}


id: PBO:0017522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4, Gim3 (predicted)","termid":"PBO:0017522"}


id: PBO:0073471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan alpha","termid":"PBO:0073471"}


id: SO:1000104
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000104 sequence_variant_increasing_level_of_translation_product (obsolete SO:1000104)","synonyms":[{"name":"mutationt increasing level of translation product","type":"related"},{"name":"sequence variant increasing level of translation product","type":"exact"}],"termid":"SO:1000104"}


id: PBO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 125","termid":"PBO:0042062"}


id: GO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"negatively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell chemotaxis","termid":"GO:0060755"}


id: PBO:0086454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YLR046C has a paralog, RTA1, that arose from the whole genome duplication","termid":"PBO:0086454"}


id: PBO:0028509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028509"}


id: PR:Q9UTM1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C144.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.01","synonyms":[{"name":"Spom972h-SPAC144.01","type":"exact"}],"termid":"PR:Q9UTM1"}


id: GO:0014073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tropane stimulus. Tropane is a nitrogenous bicyclic organic compound mainly known for a group of alkaloids derived from it (called tropane alkaloids), which include, among others, atropine and cocaine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tropane","termid":"GO:0014073"}


id: PBO:0054151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1518","termid":"PBO:0054151"}


id: PBO:0052684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 52","termid":"PBO:0052684"}


id: PBO:0045513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 5","termid":"PBO:0045513"}


id: GO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + inorganic triphosphate = diphosphate + phosphate.","definition_xrefs":["EC:3.6.1.25","RHEA:14157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inorganic triphosphate phosphatase activity","secondary_identifiers":["MetaCyc:TRIPHOSPHATASE-RXN","KEGG_REACTION:R00138"],"synonyms":[{"name":"inorganic triphosphatase activity","type":"related"},{"name":"triphosphatase activity","type":"broad"},{"name":"triphosphate phosphohydrolase activity","type":"related"},{"name":"tripolyphosphatase activity","type":"exact"}],"termid":"GO:0050355"}


id: GO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits, inhibin beta-A and inhibin beta-B (sometimes known as activin beta or activin/inhibin beta). There are three forms of activin complex, activin A, which is composed of 2 inhibin beta-A subunits, activin B, which is composed of 2 inhibin beta-B subunits, and activin AB, which is composed of an inhibin beta-A and an inhibin beta-B subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"activin complex","termid":"GO:0048180"}


id: GO:0009620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fungus","secondary_identifiers":["GO:0009621"],"synonyms":[{"name":"response to fungi","type":"exact"}],"termid":"GO:0009620"}


id: GO:0047664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:4-aminoimidazole + H20 = imidazol-4-one + NH3.","definition_xrefs":["RHEA:22348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aminoimidazolase activity","secondary_identifiers":["MetaCyc:R13-RXN","EC:3.5.4.8"],"synonyms":[{"name":"4-aminoimidazole aminohydrolase activity","type":"related"},{"name":"4-aminoimidazole hydrolase activity","type":"related"}],"termid":"GO:0047664"}


id: PBO:0083892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) nuclear basket; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier; found in stable complex with Nup82p, Gle2p and two other FG-nucleoporins (Nup159p and Nup116p); also found in stable complex with Nic96p and two other FG-nucleoproteins (Nup49p and Nup57p)","termid":"PBO:0083892"}


id: GO:0044743
data:
  {"annotated_genes":["SJAG_01442","SJAG_01597","SJAG_00564","SJAG_01684","SJAG_04336","SJAG_03560","SJAG_04218","SJAG_01615","SJAG_04432","SJAG_03324","SJAG_02797","SJAG_01120","SJAG_02917","SJAG_02693","SJAG_01879","SJAG_03358","SJAG_02997","SJAG_05315","SJAG_04014","SJAG_03440","SJAG_02077","SJAG_04996","SJAG_01854","SJAG_00373","SJAG_00891","SJAG_03515","SJAG_01560","SJAG_00702","SJAG_02034","SJAG_00196","SJAG_05259","SJAG_02619","SJAG_01165","SJAG_03502","SJAG_03415","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84563,105953,94667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[103687,101351,90694,106065,99457,107981,96482,95703,84564,111392,113388,112942,95593,93064,95408,87094,85743,102344,103748,98864,103771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[94409,107569,101406,86636,92651,106232,62848,86433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[108034,93137,99268],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[97471,113448],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The directed movement of proteins into an intracellular organelle, across a membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00326":null,"SJAG_00373":null,"SJAG_00564":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01120":null,"SJAG_01165":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01684":null,"SJAG_01854":null,"SJAG_01879":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02917":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03440":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein transmembrane import into intracellular organelle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0044743","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0030150":null,"GO:0045041":null}}


id: PBO:0088719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent RNA helicase Mrh5","termid":"PBO:0088719"}


id: PBO:0089997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-related chaperone Pmp20","termid":"PBO:0089997"}


id: PBO:0076619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor B","termid":"PBO:0076619"}


id: GO:0045205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAP kinase into, out of or within a cell, or between cells.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK transporter activity (obsolete GO:0045205)","synonyms":[{"name":"MAPK transporter activity","type":"exact"}],"termid":"GO:0045205"}


id: PR:O74556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C970.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.02","synonyms":[{"name":"Spom972h-SPCC970.02","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C970.02 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74556"}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: PBO:0046229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 22","termid":"PBO:0046229"}


id: GO:0004230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a N-terminal glutamate (and to a lesser extent aspartate) from a peptide.","definition_xrefs":["EC:3.4.11.7"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamyl aminopeptidase activity (obsolete GO:0004230)","secondary_identifiers":["MetaCyc:3.4.11.7-RXN"],"synonyms":[{"name":"Ca2+-activated glutamate aminopeptidase activity","type":"related"},{"name":"L-aspartate aminopeptidase activity","type":"related"},{"name":"aminopeptidase A","type":"related"},{"name":"angiotensinase A","type":"related"},{"name":"angiotensinase A2","type":"related"},{"name":"antigen BP-1/6C3 of mouse B lymphocytes","type":"related"},{"name":"aspartate aminopeptidase activity","type":"related"},{"name":"glutamyl aminopeptidase activity","type":"exact"},{"name":"glutamyl peptidase activity","type":"related"},{"name":"membrane aminopeptidase II","type":"related"}],"termid":"GO:0004230"}


id: PBO:0040628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell scaffold protein with ankyrin repeats 1","termid":"PBO:0040628"}


id: PBO:0046578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 20","termid":"PBO:0046578"}


id: GO:0043496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein homodimerization activity","termid":"GO:0043496"}


id: PBO:0071727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 25","termid":"PBO:0071727"}


id: PBO:0077588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin pseudogene 1","termid":"PBO:0077588"}


id: PBO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5","termid":"PBO:0005223"}


id: PBO:0063386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5","termid":"PBO:0063386"}


id: FYPO:0006925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates at or near replication fork barriers is lower than normal.","definition_xrefs":["PMID:31149897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad51 foci at mitotic DNA replication fork barriers during vegetative growth","type":"related"},{"name":"reduced number of Rad51 foci at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006925"}


id: PBO:0084695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial elongation factor involved in translational elongation","termid":"PBO:0084695"}


id: internal:label
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"label","termid":"internal:label"}


id: PR:O42700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transaldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10683:SF1","PRO:DNx","OMA:SCHPO04445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.06c","secondary_identifiers":["UniProtKB:O42700"],"synonyms":[{"name":"Spom972h-TALDO1","type":"exact"}],"termid":"PR:O42700"}


id: PBO:0090699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex-associated motor subunit Pam17","termid":"PBO:0090699"}


id: PBO:0075464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 16","termid":"PBO:0075464"}


id: PBO:0017843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine transmembrane transporter (predicted)","termid":"PBO:0017843"}


id: PBO:0064740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 76","termid":"PBO:0064740"}


id: PBO:0039086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP/GTP binding carboxypeptidase 1","termid":"PBO:0039086"}


id: RO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity and a condition (a phenotype or disease) of a host, in which the material entity is not part of the host, and is considered harmless to non-allergic hosts, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_allergic_trigger_for","termid":"RO:0001020"}


id: PBO:0049520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 1Q","termid":"PBO:0049520"}


id: PBO:0058127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4429","termid":"PBO:0058127"}


id: PBO:0054710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2119","termid":"PBO:0054710"}


id: PBO:0089079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lys48-specific deubiquitinase Mindy family, Miy1","termid":"PBO:0089079"}


id: PR:Q9P7C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erj5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7C1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C2E1P5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.03","synonyms":[{"name":"Spom972h-erj5","type":"exact"}],"termid":"PR:Q9P7C1"}


id: FYPO:0006990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the chromosome than normal in regions containing protein-coding genes.","definition_xrefs":["PMID:26518661","PomBase:mah","GO:0031509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased spatial extent of heterochromatin assembly at protein coding gene","synonyms":[{"name":"heterochromatin spreading at protein coding gene","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"increased spatial extent of heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0006990"}


id: GO:0009815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-aminocyclopropane-1-carboxylate + L-ascorbate + O2 = CO2 + dehydroascorbate + ethylene + 2 H2O + hydrogen cyanide. Ethene is also known as ethylene.","definition_xrefs":["RHEA:23640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate oxidase activity","secondary_identifiers":["EC:1.14.17.4","KEGG_REACTION:R07214","MetaCyc:ETHYL-RXN"],"synonyms":[{"name":"1-aminocyclopropane-1-carboxylate oxygenase (ethylene-forming)","type":"related"},{"name":"ACC oxidase activity","type":"exact"},{"name":"aminocyclopropanecarboxylate oxidase activity","type":"related"},{"name":"ethene-forming enzyme","type":"broad"},{"name":"ethylene-forming enzyme","type":"broad"}],"termid":"GO:0009815"}


id: MOD:01821
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex reporter+balance group.","definition_xrefs":["URL:http://www.piercenet.com/files/2162220.pdf","Unimod:985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01821"}


id: PBO:0063533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and pleckstrin homology domains 1, pseudogene","termid":"PBO:0063533"}


id: PBO:0073158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit gamma","termid":"PBO:0073158"}


id: GO:0033618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase) in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex IV assembly","termid":"GO:0008535"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0065003","GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex IV assembly","synonyms":[{"name":"plasma membrane cytochrome c oxidase biogenesis","type":"broad"},{"name":"plasma membrane cytochrome c oxidase complex assembly","type":"exact"}],"termid":"GO:0033618"}


id: PBO:0041003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 5","termid":"PBO:0041003"}


id: GO:0052180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protease activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidase activity in other organism involved in symbiotic interaction (obsolete GO:0052180)","synonyms":[{"name":"down regulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"down-regulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"downregulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"inhibition of protease activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of protease activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052180"}


id: GO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an epithelial cell with respect to other epithelial cells that contributes to the shaping of the Malpighian tubule.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell rearrangement involved in Malpighian tubule morphogenesis","synonyms":[{"name":"cell migration involved in Malpighian tubule morphogenesis","type":"exact"}],"termid":"GO:0061334"}


id: PBO:0043351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1 like","termid":"PBO:0043351"}


id: PBO:0068366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 149","termid":"PBO:0068366"}


id: GO:0014727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extraocular skeletal muscle development","termid":"GO:0014727"}


id: GO:0070952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a gram-positive bacterium, the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"}


id: PBO:0047606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHL1 pseudogene 1","termid":"PBO:0047606"}


id: FYPO:0007034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylglyoxal than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to phenylglyoxal","synonyms":[{"name":"resistance to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"resistance to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"resistance to phenylglyoxal during vegetative growth","type":"exact"},{"name":"resistant to phenylglyoxal","type":"exact"}],"termid":"FYPO:0007034"}


id: PBO:0039402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 2","termid":"PBO:0039402"}


id: PBO:0042801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 350","termid":"PBO:0042801"}


id: PATO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality that is independent of the EM wavelength range.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}


id: GO:1990974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby the centrosome is held at the cell center while the nucleus moves to the cell rear by actin retrograde flow resulting in the position of the centrosome between the nucleus and the leading edge of the cell.","definition_xrefs":["GOC:hjd","PMID:21173262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"actin-dependent nuclear migration","synonyms":[{"name":"actin-dependent nuclear movement","type":"related"}],"termid":"GO:1990974"}


id: GO:0021523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic motor neuron differentiation","termid":"GO:0021523"}


id: SO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variation qualifying the presence of a sequence in a genome which is entirely missing in another genome.","definition_xrefs":["PMID:25881062","BCS:bbean","PMID:19956538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presence_absence_variation","synonyms":[{"name":"PAV","type":"exact"},{"name":"presence absence variation","type":"exact"},{"name":"presence-absence variation","type":"exact"},{"name":"presence-absence_variation","type":"exact"},{"name":"presence/absence variation","type":"exact"},{"name":"presence/absence_variation","type":"exact"}],"termid":"SO:0002210"}


id: PBO:0030132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_copper_level","termid":"PBO:0030132"}


id: PBO:0042701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 1","termid":"PBO:0042701"}


id: GO:0008294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.","definition_xrefs":["GOC:mah","EC:4.6.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase activity","termid":"GO:0004016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"calcium- and calmodulin-responsive adenylate cyclase activity","secondary_identifiers":["Reactome:R-HSA-111930","Reactome:R-HSA-442715"],"synonyms":[{"name":"calcium- and calmodulin-responsive adenylyl cyclase activity","type":"exact"},{"name":"calcium/calmodulin-responsive adenylate cyclase activity","type":"exact"}],"termid":"GO:0008294"}


id: PBO:0111527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 7","termid":"PBO:0111527"}


id: GO:1905603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GOC:TermGenie","PMID:30280653","GO_REF:0000058","GOC:als","GOC:bc","GOC:aruk","PMID:22524708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"part_of","term_name":"maintenance of blood-brain barrier","termid":"GO:0035633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood-brain barrier permeability","synonyms":[{"name":"regulation of BBB permeability","type":"exact"},{"name":"regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905603"}


id: PBO:0057557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 675","termid":"PBO:0057557"}


id: PBO:0057092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 188","termid":"PBO:0057092"}


id: PBO:0004401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd1","termid":"PBO:0004401"}


id: GO:0031613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits that form the peripheral lid of the regulatory particle of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, lid subcomplex","termid":"GO:0008541"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle, lid subcomplex","termid":"GO:0031613"}


id: GO:0010752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cGMP-mediated signaling","synonyms":[{"name":"regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010752"}


id: PBO:0082269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease of high capacity and low affinity; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation ammonia permease activity regulated by TORC1 effectors, Npr1p and Par32p; MEP3 has a paralog, MEP1, that arose from the whole genome duplication","termid":"PBO:0082269"}


id: GO:0010203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Very low fluence red light is defined in this case as short pulses of red light followed by darkness, providing light levels of less than 0.001 mmol/m2/sec.","definition_xrefs":["GOC:sm","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"},{"relation_name":"is_a","term_name":"response to very low light intensity stimulus","termid":"GO:0055122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to very low fluence red light stimulus","termid":"GO:0010203"}


id: GO:1901666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of NAD+ ADP-ribosyltransferase activity","termid":"GO:1901664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD+ ADP-ribosyltransferase activity","synonyms":[{"name":"activation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"activation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"activation of NAD+ ADP-ribosyltransferase activity","type":"narrow"},{"name":"activation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"activation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"activation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"activation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"activation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"positive regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"positive regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"positive regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"positive regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"up regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"up regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"up regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"up regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"up regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"up-regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"up-regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"up-regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"up-regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"up-regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"upregulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"upregulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"upregulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"upregulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"upregulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901666"}


id: GO:0014824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the artery. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The artery is a vessel carrying blood away from the heart.","definition_xrefs":["GOC:mtg_muscle","MSH:D001158","MA:0000708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery smooth muscle contraction","termid":"GO:0014824"}


id: PBO:0064263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing B2","termid":"PBO:0064263"}


id: GO:1904325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory G protein-coupled receptor phosphorylation.","definition_xrefs":["PMID:15937517","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of inhibitory G protein-coupled receptor phosphorylation","termid":"GO:1904323"},{"relation_name":"positively_regulates","term_name":"inhibitory G protein-coupled receptor phosphorylation","termid":"GO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"activation of inhibitory G-protein coupled receptor phosphorylation","type":"narrow"},{"name":"positive regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"up-regulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"},{"name":"upregulation of inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:1904325"}


id: PBO:0048672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like 2","termid":"PBO:0048672"}


id: PBO:0068927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 170, pseudogene","termid":"PBO:0068927"}


id: PBO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 188B, pseudogene","termid":"PBO:0042117"}


id: PBO:0013130
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PseudoUridine Synthase","termid":"PBO:0013130"}


id: GO:1904917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane from lysosomal lumen to cytosol.","definition_xrefs":["GO_REF:0000078","GOC:kmv","GOC:TermGenie","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"L-arginine transmembrane export from vacuole","termid":"GO:1990818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-arginine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-arginine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904917"}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: PBO:0004132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin-like complex subunit Mde4","termid":"PBO:0004132"}


id: PR:O13651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11946:SF11","PRO:DNx","OMA:SCHPO02832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.06","secondary_identifiers":["UniProtKB:O13651"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13651"}


id: MOD:00034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues to form L-cystine.","definition_xrefs":["PubMed:7918467","PubMed:1988019","PubMed:2001356","DeltaMass:0","PubMed:2076469","ChEBI:16283","PubMed:366603","PubMed:3083866","PubMed:8344916","RESID:AA0025#CYS2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine (cross-link)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"DISULFID","type":"exact"},{"name":"DISULFID Interchain","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"XLNK-SCys-SCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00034"}


id: PBO:0029905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_Golgi_apparatus","termid":"PBO:0029905"}


id: PBO:0049373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 3","termid":"PBO:0049373"}


id: PR:O42668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase-associated protein CTR9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01880","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.14c","secondary_identifiers":["UniProtKB:O42668"],"synonyms":[{"name":"Spom972h-CTR9","type":"exact"}],"termid":"PR:O42668"}


id: PR:Q9C106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12949:SF0","PRO:DNx","OMA:SCHPO01373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.03","secondary_identifiers":["UniProtKB:Q9C106"],"synonyms":[{"name":"RNA polymerase III subunit C3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C82 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3C","type":"exact"}],"termid":"PR:Q9C106"}


id: GO:1990924
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The lipid bilayer surrounding the amphisome and separating its contents from the cell cytoplasm.","definition_xrefs":["GOC:bhm","PMID:17984323"],"gene_count":0,"genotype_count":0,"name":"obsolete amphisome membrane (obsolete GO:1990924)","synonyms":[{"name":"amphisomal membrane","type":"exact"}],"termid":"GO:1990924"}


id: FYPO:0004854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"increased protein localization to cell division site","termid":"FYPO:0004655"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0000138","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to actomyosin contractile ring","synonyms":[{"name":"increased protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased protein localization to mitotic contractile ring","type":"exact"},{"name":"increased protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0004854"}


id: FYPO:0007864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle does not occur during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle pole","type":"exact"},{"name":"abolished protein localization to spindle pole during first meiotic nuclear division","type":"exact"},{"name":"protein localization to meiotic spindle pole during meiosis I abolished","type":"exact"}],"termid":"FYPO:0007864"}


id: GO:1900991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of scopolamine.","definition_xrefs":["GOC:yaf","PMID:18251710","GOC:TermGenie","PMID:32879484","PMID:16720272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"scopolamine biosynthetic process","secondary_identifiers":["GO:1900989"],"synonyms":[{"name":"scopolamine anabolism","type":"exact"},{"name":"scopolamine biosynthesis","type":"exact"},{"name":"scopolamine formation","type":"exact"},{"name":"scopolamine metabolic process","type":"broad"},{"name":"scopolamine metabolism","type":"broad"},{"name":"scopolamine synthesis","type":"exact"}],"termid":"GO:1900991"}


id: GO:0042018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-22 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-22 receptor activity","synonyms":[{"name":"IL-22 receptor activity","type":"exact"},{"name":"IL-22R","type":"exact"}],"termid":"GO:0042018"}


id: GO:0010208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of reticulate pollen wall pattern consisting of two layers, exine and intine.","definition_xrefs":["PMID:11743117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pollen wall assembly","synonyms":[{"name":"pollen wall formation","type":"related"}],"termid":"GO:0010208"}


id: GO:0004781
data:
  {"annotated_genes":["SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103697],"is_not":false,"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + sulfate = diphosphate + adenylylsulfate.","definition_xrefs":["EC:2.7.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate adenylyltransferase activity","termid":"GO:0004779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sulfate adenylyltransferase (ATP) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:18133","Reactome:R-HSA-3560794","MetaCyc:SULFATE-ADENYLYLTRANS-RXN","Reactome:R-HSA-174392"],"synonyms":[{"name":"ATP sulfurylase activity","type":"related"},{"name":"ATP-sulfurylase activity","type":"related"},{"name":"ATP:sulfate adenylyltransferase activity","type":"exact"},{"name":"adenosine-5'-triphosphate sulfurylase activity","type":"related"},{"name":"adenosinetriphosphate sulfurylase activity","type":"related"},{"name":"adenylylsulfate pyrophosphorylase activity","type":"related"},{"name":"sulfate adenylate transferase activity","type":"related"},{"name":"sulfurylase activity","type":"related"},{"name":"sulphate adenylyltransferase (ATP) activity","type":"exact"}],"termid":"GO:0004781","terms_by_termid":{"GO:0004781":null}}


id: PBO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 8","termid":"PBO:0060711"}


id: GO:0090275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatostatin secretion","termid":"GO:0090273"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"somatostatin secretion","termid":"GO:0070253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of somatostatin secretion","termid":"GO:0090275"}


id: PBO:0049044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 35","termid":"PBO:0049044"}


id: PBO:0043648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 7B","termid":"PBO:0043648"}


id: PBO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U5","termid":"PBO:0004419"}


id: PBO:0031206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_calcium_ion","termid":"PBO:0031206"}


id: PBO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin domain containing 1","termid":"PBO:0043268"}


id: PBO:0068137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 444","termid":"PBO:0068137"}


id: PR:Q8TFH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase PB17E12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.14c","synonyms":[{"name":"Spom972h-SPAPB17E12.14c","type":"exact"}],"termid":"PR:Q8TFH0"}


id: PBO:0048576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl diphosphate synthase 1","termid":"PBO:0048576"}


id: GO:1902664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["PMID:23444136","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"positive regulation of protein lipidation","termid":"GO:1903061"},{"relation_name":"positively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"activation of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"activation of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"positive regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"up-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"upregulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902664"}


id: PBO:0017899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase","termid":"PBO:0017899"}


id: GO:0000786
data:
  {"annotated_genes":["SJAG_03542","SJAG_00335","SJAG_03047","SJAG_03942","SJAG_03941","SJAG_00336","SJAG_00303","SJAG_01873","SJAG_03543","SJAG_00302","SJAG_00307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87299,87300,87301,87964,98162,98163,98164,98198,98199,98200,98574,108753,108754,108755,108777,108778,108779,113833,113846],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[98227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043505"},{"annotations":[115695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_01873":null,"SJAG_03047":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03941":null,"SJAG_03942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"nucleosome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"secondary_identifiers":["GO:0000787","GO:0005718","GO:0000788","Wikipedia:Nucleosome"],"synonyms":[{"name":"cytoplasmic nucleosome","type":"narrow"},{"name":"nuclear nucleosome","type":"narrow"}],"termid":"GO:0000786","terms_by_termid":{"GO:0000786":null,"GO:0043505":null,"GO:0140573":null}}


id: PBO:0044904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 1","termid":"PBO:0044904"}


id: FYECO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for more than 24 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth >24 hrs","synonyms":[{"name":"growth >24 hours","type":"exact"}],"termid":"FYECO:0000217"}


id: PATO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striated","termid":"PATO:0001410"}


id: PBO:0029035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_multinucleate_cell_with_elongated_germ_tube","termid":"PBO:0029035"}


id: PBO:0042887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 300","termid":"PBO:0042887"}


id: GO:0043618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0043618)","termid":"GO:0043618"}


id: PBO:0088226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation protein Dcn1","termid":"PBO:0088226"}


id: GO:1901799
data:
  {"annotated_genes":["SJAG_00052","SJAG_03048","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[86608,103122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteasomal protein catabolic process.","definition_xrefs":["PMID:21669198","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"negatively_regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"down-regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"downregulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"inhibition of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasome-mediated protein catabolic process","type":"exact"},{"name":"inhibition of proteasome-mediated protein catabolism","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:1901799","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: GO:1900480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diacylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"diacylglycerol biosynthetic process","termid":"GO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of diacylglycerol biosynthetic process","synonyms":[{"name":"regulation of diacylglycerol anabolism","type":"exact"},{"name":"regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"regulation of diacylglycerol formation","type":"exact"},{"name":"regulation of diacylglycerol synthesis","type":"exact"}],"termid":"GO:1900480"}


id: GO:0071686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The elongated nucleus which forms during the rapid oscillatory movement at meiotic prophase; characterized in Schizosaccharomyces pombe.","definition_xrefs":["GOC:vw","PMID:15030757"],"gene_count":0,"genotype_count":0,"name":"obsolete horsetail nucleus (obsolete GO:0071686)","termid":"GO:0071686"}


id: PBO:0028167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028167"}


id: GO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-7 activity (obsolete GO:0004210)","synonyms":[{"name":"caspase-7 activity","type":"exact"}],"termid":"GO:0004210"}


id: FYPO:0008079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a inositol heptakisphosphate 5-kinase are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36468882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal inositol heptakisphosphate 5-kinase activity","termid":"FYPO:0008079"}


id: GO:0048492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"exact"}],"termid":"GO:0048492"}


id: PBO:0086656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has no significant sequence similarity to any known protein","termid":"PBO:0086656"}


id: PBO:0066991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 294","termid":"PBO:0066991"}


id: PBO:0088794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GRASP protein family Golgi protein","termid":"PBO:0088794"}


id: PBO:0075148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 4","termid":"PBO:0075148"}


id: PBO:0091351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial expression network (MIOREX) component Mrx11","termid":"PBO:0091351"}


id: PBO:0049271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like 2","termid":"PBO:0049271"}


id: PBO:0078325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRDN antisense RNA 1","termid":"PBO:0078325"}


id: FYPO:0008133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell is lower than normal in the Golgi.","definition_xrefs":["PMID:37815455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphatidylinositol-4-phosphate level","termid":"FYPO:0006775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased phosphatidylinositol-4-phosphate level in the Golgi","termid":"FYPO:0008133"}


id: PR:O13644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19957:SF3","OMA:SCHPO02839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein sed5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.14c","secondary_identifiers":["UniProtKB:O13644"],"synonyms":[{"name":"Spom972h-STX5","type":"exact"}],"termid":"PR:O13644"}


id: PBO:0065287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 2","termid":"PBO:0065287"}


id: PBO:0050037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 5","termid":"PBO:0050037"}


id: PBO:0026663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026663"}


id: PBO:0040962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 33","termid":"PBO:0040962"}


id: FYPO:0008137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lipid droplets are smaller and more numerous than normal.","definition_xrefs":["PMID:35658118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid droplet organization","termid":"FYPO:0000808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased size and number of lipid droplets","termid":"FYPO:0008137"}


id: PR:000037299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex composed of two subunits of Schizosaccharomyces pombe serine/threonine-protein kinase cds1 primed by rad3-rad26 complex.","definition_xrefs":["PMID:19357077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos(T11) dimer","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"cds1/Phos(T11) dimer","type":"exact"}],"termid":"PR:000037299"}


id: PBO:0077575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane inner ear","termid":"PBO:0077575"}


id: GO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cjm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}


id: GO:0150020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated on the basal neuron side and organized into dendritic branches.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite arborization","termid":"GO:0140059"},{"relation_name":"is_a","term_name":"basal dendrite morphogenesis","termid":"GO:0150019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite arborization","termid":"GO:0150020"}


id: GO:0140285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which early and late endosomes undergo budding and fission reactions that separate regions destined for lysosomal degradation from carriers to be recycled to the plasma membrane.","definition_xrefs":["PMID:25416943","PMID:30220460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome fission","termid":"GO:0140285"}


id: PBO:0026830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026830"}


id: PBO:0054613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2018","termid":"PBO:0054613"}


id: PBO:0067089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 125, pseudogene","termid":"PBO:0067089"}


id: FYPO:0003498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins earlier than normal.","definition_xrefs":["PMID:22970243","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"},{"relation_name":"output_of","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"premature mitotic DNA replication initiation","synonyms":[{"name":"advanced mitotic DNA replication initiation","type":"exact"},{"name":"premature DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"premature DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003498"}


id: FYPO:0003253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of one or more amino acids into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished amino acid import during vegetative growth","synonyms":[{"name":"abolished amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"abolished amino acid import during mitotic cell cycle","type":"related"},{"name":"abolished amino acid import into cell","type":"exact"},{"name":"abolished amino acid uptake","type":"exact"},{"name":"amino acid import abolished","type":"exact"}],"termid":"FYPO:0003253"}


id: PBO:0085813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; exhibits genetic interaction with ERG11 and protein-protein interaction with Hsp82p","termid":"PBO:0085813"}


id: PBO:0066138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor 1","termid":"PBO:0066138"}


id: GO:0110014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of aggregation involved in sorocarp development. Aggregation involved in sorocarp development is the process whose specific outcome is the progression of the aggregate over time, from its formation to the point when a slug is formed. Aggregate development begins in response to starvation and continues by the chemoattractant-mediated movement of cells toward each other. The aggregate is a multicellular structure that gives rise to the slug.","definition_xrefs":["PMID:28257811","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"negatively_regulates","term_name":"aggregation involved in sorocarp development","termid":"GO:0031152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aggregation involved in sorocarp development","termid":"GO:0110014"}


id: FYPO:0004564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha-galactosidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal alpha-galactosidase activity","termid":"FYPO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased alpha-galactosidase activity","termid":"FYPO:0004564"}


id: PBO:0005885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1 (predicted)","termid":"PBO:0005885"}


id: GO:1902979
data:
  {"annotated_genes":["SJAG_00998"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88333],"is_not":false,"summary":null,"term":"GO:1902979"}]},"cv_name":"biological_process","definition":"Any DNA replication termination involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00998":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication termination involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902979","terms_by_termid":{"GO:1902979":null}}


id: PBO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 9","termid":"PBO:0070954"}


id: GO:0120287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["GOC:krc","PMID:32616437"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120287)","termid":"GO:0120287"}


id: FYPO:0003237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used (or not spliced at all) is increased.","definition_xrefs":["PMID:24210919","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA splicing","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA splicing at cryptic splice sites","synonyms":[{"name":"increased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"increased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"increased RNA splicing of cryptic introns","type":"exact"}],"termid":"FYPO:0003237"}


id: PBO:0076153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURP and G-patch domain containing 1","termid":"PBO:0076153"}


id: GO:0043093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cytokinesis process that involves a set of conserved proteins including FtsZ, and results in the formation of two similarly sized and shaped cells.","definition_xrefs":["PMID:12626683","GOC:mah","ISBN:0815108893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"},{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"part_of","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"FtsZ-dependent cytokinesis","secondary_identifiers":["Wikipedia:Binary_fission"],"synonyms":[{"name":"cytokinesis by binary fission","type":"related"},{"name":"prokaryote-type cytokinesis","type":"related"},{"name":"prokaryotic fission","type":"related"}],"termid":"GO:0043093"}


id: PBO:0057417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548s","termid":"PBO:0057417"}


id: PBO:0067508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 648, pseudogene","termid":"PBO:0067508"}


id: PBO:0056008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056008"}


id: PBO:0049512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 19","termid":"PBO:0049512"}


id: SO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that has been inserted into the bacterial genome using a bacterial artificial chromosome.","direct_ancestors":[{"relation_name":"derives_from","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"cloned_genomic_insert","termid":"SO:0000914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_cloned_genomic_insert","synonyms":[{"name":"BAC cloned genomic insert","type":"exact"}],"termid":"SO:0000992"}


id: PBO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-ocular apraxia 2","termid":"PBO:0001975"}


id: FYPO:0004420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation (obsolete FYPO:0004420)","synonyms":[{"name":"increased peptidyl-serine phosphorylation","type":"exact"},{"name":"increased serine phosphorylation","type":"exact"}],"termid":"FYPO:0004420"}


id: PBO:0073868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 4","termid":"PBO:0073868"}


id: PBO:0090441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose and arabinose reductase","termid":"PBO:0090441"}


id: PBO:0081533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 443","termid":"PBO:0081533"}


id: GO:0001666
data:
  {"annotated_genes":["SJAG_04018","SJAG_00221","SJAG_00642","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107891,106038,97385,113140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to hypoxic stress","type":"exact"},{"name":"response to intermittent hypoxia","type":"narrow"},{"name":"response to lowered oxygen tension","type":"exact"},{"name":"response to sustained hypoxia","type":"narrow"}],"termid":"GO:0001666","terms_by_termid":{"GO:0071456":null}}


id: PATO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000223 muscle strength (obsolete PATO:0000223)","termid":"PATO:0000223"}


id: GO:1900685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of fumonisin biosynthetic process","termid":"GO:1900683"},{"relation_name":"positively_regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of fumonisin biosynthetic process","synonyms":[{"name":"activation of fumonisin anabolism","type":"exact"},{"name":"activation of fumonisin biosynthesis","type":"exact"},{"name":"activation of fumonisin biosynthetic process","type":"narrow"},{"name":"activation of fumonisin formation","type":"exact"},{"name":"activation of fumonisin synthesis","type":"exact"},{"name":"positive regulation of fumonisin anabolism","type":"exact"},{"name":"positive regulation of fumonisin biosynthesis","type":"exact"},{"name":"positive regulation of fumonisin formation","type":"exact"},{"name":"positive regulation of fumonisin synthesis","type":"exact"},{"name":"up regulation of fumonisin anabolism","type":"exact"},{"name":"up regulation of fumonisin biosynthesis","type":"exact"},{"name":"up regulation of fumonisin biosynthetic process","type":"exact"},{"name":"up regulation of fumonisin formation","type":"exact"},{"name":"up regulation of fumonisin synthesis","type":"exact"},{"name":"up-regulation of fumonisin anabolism","type":"exact"},{"name":"up-regulation of fumonisin biosynthesis","type":"exact"},{"name":"up-regulation of fumonisin biosynthetic process","type":"exact"},{"name":"up-regulation of fumonisin formation","type":"exact"},{"name":"up-regulation of fumonisin synthesis","type":"exact"},{"name":"upregulation of fumonisin anabolism","type":"exact"},{"name":"upregulation of fumonisin biosynthesis","type":"exact"},{"name":"upregulation of fumonisin biosynthetic process","type":"exact"},{"name":"upregulation of fumonisin formation","type":"exact"},{"name":"upregulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900685"}


id: PBO:0089273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic P body 3'-5'-exoribonuclease, Dis3L2-related","termid":"PBO:0089273"}


id: PBO:0078194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-4","termid":"PBO:0078194"}


id: GO:2001215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:2001215)","synonyms":[{"name":"regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"related"},{"name":"regulation of HMG-CoA reductase activity","type":"related"}],"termid":"GO:2001215"}


id: GO:0004452
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98048],"is_not":false,"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.","definition_xrefs":["RHEA:23284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191382","MetaCyc:IPPISOM-RXN","KEGG_REACTION:R01123","EC:5.3.3.2"],"synonyms":[{"name":"IPP isomerase activity","type":"related"},{"name":"isopentenyl-diphosphate D-isomerase activity","type":"exact"},{"name":"isopentenyl-diphosphate delta3-delta2-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate delta-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate isomerase activity","type":"related"},{"name":"methylbutenylpyrophosphate isomerase activity","type":"related"}],"termid":"GO:0004452","terms_by_termid":{"GO:0004452":null}}


id: PBO:0074637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 30B","termid":"PBO:0074637"}


id: GO:0060609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the hollowing out of an epithelial rod or cord to form the central hole in a tube.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in tube lumen cavitation","synonyms":[{"name":"apoptosis involved in tube lumen cavitation","type":"narrow"}],"termid":"GO:0060609"}


id: GO:0051580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of neurotransmitter uptake","synonyms":[{"name":"regulation of neurotransmitter import","type":"exact"},{"name":"regulation of neurotransmitter reuptake","type":"exact"}],"termid":"GO:0051580"}


id: GO:0097265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-HETE + NADP+ = 5-oxo-ETE + NADPH + H+.","definition_xrefs":["PMID:1326548","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5(S)-hydroxyeicosatetraenoic acid dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161776"],"synonyms":[{"name":"5(S)-HETE dehydrogenase activity","type":"exact"},{"name":"5-HETE dehydrogenase activity","type":"exact"},{"name":"5-hydroxy-eicosatetraenoic acid dehydrogenase activity","type":"exact"}],"termid":"GO:0097265"}


id: PBO:0069232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 487, pseudogene","termid":"PBO:0069232"}


id: GO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the clypeus over time, from its formation to the mature structure. The clypeus is the shield-shaped plate on an insect's head.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus development","termid":"GO:0048723"}


id: GO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XV) chains; a chondroitin sulfate proteoglycan often found in specialized basement membranes where it bridges between fibrils.","definition_xrefs":["PMID:21421911","PMID:11158616","PMID:11937714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XV trimer","termid":"GO:0005582"}


id: PBO:0040417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 2","termid":"PBO:0040417"}


id: MOD:01169
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-oxoalanine.","definition_xrefs":["PubMed:7628016","PubMed:8681943","DeltaMass:349","PubMed:14563551","RESID:AA0185","PubMed:9478923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Cys)","type":"exact"},{"name":"MOD_RES 3-oxoalanine (Ser)","type":"exact"}],"termid":"MOD:01169"}


id: PBO:0004252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl methyl esterase (predicted)","termid":"PBO:0004252"}


id: PBO:0089313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node Gef2-related protein Nod1","termid":"PBO:0089313"}


id: PATO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being in a position that produces a separation in, or acting to separate, another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separating","termid":"PATO:0002525"}


id: GO:0018991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive behavior that results in the deposition of eggs (either fertilized or not) upon a surface or into a medium such as water.","definition_xrefs":["PMID:31164023","PMID:18050396","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg-laying behavior","secondary_identifiers":["GO:0060403","Wikipedia:Oviposition"],"synonyms":[{"name":"egg laying","type":"broad"},{"name":"egg-laying","type":"broad"},{"name":"oviposition","type":"exact"},{"name":"post-mating oviposition","type":"narrow"}],"termid":"GO:0018991"}


id: MOD:00056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-acetyl-L-isoleucine.","definition_xrefs":["PubMed:8034631","RESID:AA0047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-acetamido-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylamino-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-methylpentanoic acid","type":"exact"},{"name":"AcIle","type":"exact"},{"name":"N-acetyl-L-isoleucine","type":"exact"},{"name":"N-acetylated L-isoleucine","type":"exact"},{"name":"acetylisoleucine","type":"exact"}],"termid":"MOD:00056"}


id: GO:1902917
data:
  {"annotated_genes":["SJAG_00514","SJAG_03453","SJAG_01794","SJAG_04509","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84129,86075,87045,89662,107543],"is_not":false,"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating projection assembly.","definition_xrefs":["GO_REF:0000058","GOC:di","GOC:TermGenie","PMID:12455985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"part_of","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mating projection assembly","type":"narrow"},{"name":"activation of mating projection biogenesis","type":"related"},{"name":"positive regulation of mating projection biogenesis","type":"related"},{"name":"up regulation of mating projection assembly","type":"exact"},{"name":"up regulation of mating projection biogenesis","type":"related"},{"name":"up-regulation of mating projection assembly","type":"exact"},{"name":"up-regulation of mating projection biogenesis","type":"related"},{"name":"upregulation of mating projection assembly","type":"exact"},{"name":"upregulation of mating projection biogenesis","type":"related"}],"termid":"GO:1902917","terms_by_termid":{"GO:1902917":null}}


id: PBO:0076726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 family AKT coactivator B","termid":"PBO:0076726"}


id: PBO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mrd1 (predicted)","termid":"PBO:0003625"}


id: PBO:0067100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 141, pseudogene","termid":"PBO:0067100"}


id: PBO:0067667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 846, pseudogene","termid":"PBO:0067667"}


id: PBO:0084710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane citrate transporter; member of the mitochondrial carrier family","termid":"PBO:0084710"}


id: GO:0033331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-kaur-16-ene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["PMID:17064690","GOC:mah","MetaCyc:PWY-5032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-kaurene metabolic process","synonyms":[{"name":"ent-kaurene metabolism","type":"exact"}],"termid":"GO:0033331"}


id: PBO:0075386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp2 transcription factor","termid":"PBO:0075386"}


id: PBO:0050475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A3","termid":"PBO:0050475"}


id: PBO:0065524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 1","termid":"PBO:0065524"}


id: GO:0017168
data:
  {"annotated_genes":["SJAG_01995"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84210],"is_not":false,"summary":null,"term":"GO:0017168"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxo-L-proline + ATP + 2 H2O = L-glutamate + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:3.5.2.9","RHEA:10348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00251","MetaCyc:5-OXOPROLINASE-ATP-HYDROLYSING-RXN","Wikipedia:5-oxoprolinase_(ATP-hydrolysing)","Reactome:R-HSA-1247935","Reactome:R-HSA-5603208"],"synonyms":[{"name":"5-OPase activity","type":"related"},{"name":"5-oxo-L-prolinase activity","type":"related"},{"name":"5-oxo-L-proline amidohydrolase (ATP-hydrolysing)","type":"related"},{"name":"5-oxoprolinase (ATP-hydrolysing)","type":"related"},{"name":"5-oxoprolinase activity","type":"related"},{"name":"L-pyroglutamate hydrolase activity","type":"related"},{"name":"oxoprolinase activity","type":"related"},{"name":"pyroglutamase (ATP-hydrolysing)","type":"related"},{"name":"pyroglutamase (ATP-hydrolyzing) activity","type":"related"},{"name":"pyroglutamase activity","type":"related"},{"name":"pyroglutamate hydrolase activity","type":"related"},{"name":"pyroglutamic hydrolase activity","type":"related"}],"termid":"GO:0017168","terms_by_termid":{"GO:0017168":null}}


id: PBO:0055448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2880","termid":"PBO:0055448"}


id: PBO:0027239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_streptothricin","termid":"PBO:0027239"}


id: PBO:0049366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 1 pseudogene 1","termid":"PBO:0049366"}


id: GO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a non-terminal amino acid in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal protein amino acid acetylation","termid":"GO:0006475"}


id: PATO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flexibility","termid":"PATO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flexible","synonyms":[{"name":"bendy","type":"exact"}],"termid":"PATO:0001544"}


id: GO:0099145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exocytic fusion of neurotransmitter receptor containing vesicles into the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"exocytic insertion of neurotransmitter receptor to postsynaptic membrane","termid":"GO:0098967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane","termid":"GO:0099145"}


id: PBO:0066161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2-type and C3HC4-type zinc finger containing 1","termid":"PBO:0066161"}


id: RO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the severity with which a condition manifests in an individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_condition","termid":"RO:0003304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_severity_of_condition","termid":"RO:0003305"}


id: GO:1900403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:mah","PMID:17446861","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900403)","synonyms":[{"name":"negative regulation of amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900403"}


id: PBO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large subunit Gsa1","termid":"PBO:0001749"}


id: GO:0035531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 6 (CCL6).","definition_xrefs":["GOC:add","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 6 production","termid":"GO:0035530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 6 production","secondary_identifiers":["GO:0035534","GO:0035535"],"synonyms":[{"name":"chemokine (C-C motif) ligand 6 secretion","type":"narrow"},{"name":"regulation of CCL6 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 6 secretion","type":"narrow"}],"termid":"GO:0035531"}


id: FYPO:0000390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which traversing the start control point of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"premature passage through START of mitotic cell cycle","synonyms":[{"name":"advanced passage through START of mitotic cell cycle","type":"exact"},{"name":"cell cycle passage through START: increased rate","type":"related"},{"name":"premature mitotic cell cycle passage through START","type":"exact"},{"name":"premature passage through START of mitotic cell cycle during vegetative growth","type":"exact"}],"termid":"FYPO:0000390"}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: PBO:0038989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 3","termid":"PBO:0038989"}


id: PBO:0056926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase pseudogene 1","termid":"PBO:0056926"}


id: PBO:0057948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-4","termid":"PBO:0057948"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: PATO:0000228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000228 auditory (obsolete PATO:0000228)","termid":"PATO:0000228"}


id: FYPO:0007438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which activation of the mitotic spindle assembly checkpoint begins earlier than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:28017606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"advanced activation of mitotic spindle assembly checkpoint","type":"exact"},{"name":"premature activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007438"}


id: PBO:0029748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sequestered_calcium_level","termid":"PBO:0029748"}


id: PBO:0079376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 11","termid":"PBO:0079376"}


id: GO:1904691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24055447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell proliferation","termid":"GO:0061469"},{"relation_name":"negatively_regulates","term_name":"type B pancreatic cell proliferation","termid":"GO:0044342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type B pancreatic cell proliferation","synonyms":[{"name":"down regulation of pancreatic B cell proliferation","type":"exact"},{"name":"down regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"down regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"down-regulation of pancreatic B cell proliferation","type":"exact"},{"name":"down-regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"down-regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"downregulation of pancreatic B cell proliferation","type":"exact"},{"name":"downregulation of pancreatic beta cell proliferation","type":"exact"},{"name":"downregulation of type B pancreatic cell proliferation","type":"exact"},{"name":"inhibition of pancreatic B cell proliferation","type":"narrow"},{"name":"inhibition of pancreatic beta cell proliferation","type":"narrow"},{"name":"inhibition of type B pancreatic cell proliferation","type":"narrow"},{"name":"negative regulation of pancreatic B cell proliferation","type":"exact"},{"name":"negative regulation of pancreatic beta cell proliferation","type":"exact"}],"termid":"GO:1904691"}


id: GO:0016900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a disulfide molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor","secondary_identifiers":["EC:1.1.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-OH group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016900"}


id: PBO:0076756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 6","termid":"PBO:0076756"}


id: PBO:0072660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 2","termid":"PBO:0072660"}


id: FYPO:0007597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which CLRC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:23613586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abolished CLRC complex binding","synonyms":[{"name":"CLRC binding complex abolished","type":"exact"},{"name":"abolished CLRC ubiquitin ligase complex binding","type":"exact"}],"termid":"FYPO:0007597"}


id: GO:0051988
data:
  {"annotated_genes":["SJAG_00082","SJAG_01805","SJAG_05290","SJAG_01837","SJAG_04140","SJAG_04280","SJAG_03048","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[112172,86205,108141,101343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[112842,98553,86209,89991,107382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[112845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of kinetochore-microtubule attachment","type":"exact"}],"termid":"GO:0051988","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null}}


id: PBO:0076420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 1","termid":"PBO:0076420"}


id: PR:O74363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sqs1 gene.","definition_xrefs":["UniProtKB:O74363","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch and R3H domain-containing protein C30B4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.02c","synonyms":[{"name":"Spom972h-sqs1","type":"exact"}],"termid":"PR:O74363"}


id: PBO:0053154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 3","termid":"PBO:0053154"}


id: GO:0009256
data:
  {"annotated_genes":["SJAG_04156","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104526,108594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"10-formyltetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"10-formyl-THF metabolic process","type":"exact"},{"name":"10-formyl-THF metabolism","type":"exact"},{"name":"10-formyltetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0009256","terms_by_termid":{"GO:0009257":null}}


id: PR:O60105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylosuccinate lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04018","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.09c","secondary_identifiers":["UniProtKB:O60105"],"synonyms":[{"name":"ASL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ASase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Adenylosuccinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ADSL","type":"exact"}],"termid":"PR:O60105"}


id: PBO:0011488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing protein, predicted ubiquitin ligase (predicted)","termid":"PBO:0011488"}


id: PBO:0051577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor A","termid":"PBO:0051577"}


id: PBO:0077343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 82","termid":"PBO:0077343"}


id: PBO:0034244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_output_(obsolete_RO:0002403)","termid":"PBO:0034244"}


id: PBO:0079726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 2 (pseudogene)","termid":"PBO:0079726"}


id: PR:Q7LKX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1639.01c gene.","definition_xrefs":["UniProtKB:Q7LKX0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation of fatty acids protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1639.01c","synonyms":[{"name":"3-keto acyl-CoA synthase SPAC1639.01c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1639.01c","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7LKX0"}


id: PBO:0057805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3127","termid":"PBO:0057805"}


id: PBO:0076305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 1","termid":"PBO:0076305"}


id: PBO:0031693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization","termid":"PBO:0031693"}


id: PBO:0039302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG14 antisense RNA 1","termid":"PBO:0039302"}


id: FYPO:0006743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during osmotic stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006743"}


id: GO:1990618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The ANPR-A:ANP complex is composed of the hormone AMP bound to the extracellular domain of ANPR-A domain. It is formed in the atrium in response to atrial distension (high blood volume) and leads to guanylate cyclase activity of the ANPR-A receptor, thereby elevating intracellular cGMP levels. The end result is a reduction in blood volume and, therefore, a reduction in cardiac output and systemic blood pressure. Therefore, ANPR-A:ANP complex plays a major role in the regulation of blood pressure and salt-fluid volume homeostasis.","definition_xrefs":["GOC:ame","PMID:15117952"],"gene_count":0,"genotype_count":0,"name":"obsolete ANPR-A:ANP complex (obsolete GO:1990618)","synonyms":[{"name":"ANPR-A:ANP complex","type":"exact"}],"termid":"GO:1990618"}


id: GO:0021562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve development","synonyms":[{"name":"CN VIII development","type":"exact"},{"name":"acoustic nerve development","type":"exact"},{"name":"cranial nerve 8 development","type":"exact"},{"name":"cranial nerve VIII development","type":"exact"}],"termid":"GO:0021562"}


id: PBO:0027787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation","termid":"PBO:0027787"}


id: GO:1901192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"positively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of formation of translation initiation ternary complex","synonyms":[{"name":"activation of formation of translation initiation ternary complex","type":"narrow"},{"name":"activation of translation initiation ternary complex assembly","type":"exact"},{"name":"positive regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"upregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"upregulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901192"}


id: PBO:0079468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 1","termid":"PBO:0079468"}


id: GO:0120307
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extended membranous thread which firmly connects the plasma membrane to the cell wall during plasmolysis such that the plasma membrane does not separate from the cell wall completely.","definition_xrefs":["PMID:32397402","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Hechtian strand","secondary_identifiers":["Wikipedia:Hechtian_strand"],"termid":"GO:0120307"}


id: GO:1905611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:TermGenie","PMID:23409027","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"},{"relation_name":"is_a","term_name":"regulation of mRNA cap binding","termid":"GO:1905610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA cap binding","synonyms":[{"name":"down regulation of mRNA cap binding","type":"exact"},{"name":"down-regulation of mRNA cap binding","type":"exact"},{"name":"downregulation of mRNA cap binding","type":"exact"},{"name":"inhibition of mRNA cap binding","type":"narrow"}],"termid":"GO:1905611"}


id: PBO:0029768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0029768"}


id: PBO:0070645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 16","termid":"PBO:0070645"}


id: PBO:0078705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 7-1","termid":"PBO:0078705"}


id: PBO:0083615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein intermediate chain, microtubule motor protein; required for intracellular transport and cell division; acts in cytoplasmic dynein pathway; forms complex with dynein light chain Dyn2p that promotes Dyn1p homodimerization and potentiates motor processivity; Dyn2p-Pac11p complex is also important for interaction of dynein motor complex with dynactin complex; forms cortical cytoplasmic microtubule capture site with Num1p; essential in the absence of CIN8","termid":"PBO:0083615"}


id: PBO:0041830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASC3 exon junction complex subunit","termid":"PBO:0041830"}


id: PBO:0064394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy up-regulated nonubiquitous CaM kinase","termid":"PBO:0064394"}


id: GO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of mesenchymal tissue that contributes to the formation of a limb bud.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme migration","termid":"GO:0090131"},{"relation_name":"part_of","term_name":"limb bud formation","termid":"GO:0060174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}


id: PBO:0039933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 38","termid":"PBO:0039933"}


id: FYPO:0007420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abnormal transcription at telomere","synonyms":[{"name":"abnormal telomeric transcription","type":"exact"},{"name":"abnormal transcription from telomere","type":"exact"}],"termid":"FYPO:0007420"}


id: PBO:0086380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent permease of the ABC transporter family","termid":"PBO:0086380"}


id: GO:0160135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by endothelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:35284927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"endothelin receptor signaling pathway","termid":"GO:0086100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating endothelin receptor signaling pathway","termid":"GO:0160135"}


id: GO:0071537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a C3HC4-type RING finger domain interaction.","definition_xrefs":["GOC:amm","InterPro:IPR018957"],"gene_count":0,"genotype_count":0,"name":"obsolete C3HC4-type RING finger domain-mediated complex assembly (obsolete GO:0071537)","synonyms":[{"name":"zinc finger C3HC4 type domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071537"}


id: PBO:0064196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 4","termid":"PBO:0064196"}


id: GO:0071564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that is found in neural stem or progenitor cells, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, PHF10/BAF45A, ACTL6A/BAF53A genes. The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells.","definition_xrefs":["GOC:mah","PMID:17640523","GOC:ss"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"npBAF complex","termid":"GO:0071564"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: PBO:0013094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 2","termid":"PBO:0013094"}


id: PBO:0025470
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sapk INteracting protein","termid":"PBO:0025470"}


id: PBO:0071438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 44","termid":"PBO:0071438"}


id: GO:0015445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ag+(in) = ADP + phosphate + Ag+(out).","definition_xrefs":["RHEA:14733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silver ion transmembrane transporter activity","termid":"GO:0015080"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"P-type silver transporter activity","secondary_identifiers":["MetaCyc:3.6.3.53-RXN","EC:7.2.2.15"],"synonyms":[{"name":"ATP phosphohydrolase (Ag+-exporting)","type":"related"},{"name":"Ag+-exporting ATPase activity","type":"related"},{"name":"silver exporting ATPase activity","type":"exact"},{"name":"silver transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"silver-exporting ATPase activity","type":"related"}],"termid":"GO:0015445"}


id: PATO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being fibrous tissue that replaces normal tissue destroyed by injury or disease.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scarred","termid":"PATO:0001850"}


id: PBO:0054864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2278","termid":"PBO:0054864"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: PATO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow brown","termid":"PATO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark yellow brown","termid":"PATO:0002412"}


id: PBO:0073893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 9","termid":"PBO:0073893"}


id: GO:1905741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium release that is involved in positive regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["GO_REF:0000060","PMID:26644474","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"calcium export from the mitochondrion","termid":"GO:0099093"},{"relation_name":"part_of","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium export from the mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium release involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905741"}


id: PBO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of the NatB N-terminal acetyltransferase; NatB catalyzes N-acetylation of proteins with specific N-terminal sequences; involved in mitochondrial inheritance and actin assembly","termid":"PBO:0085036"}


id: PBO:0078371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 15-1","termid":"PBO:0078371"}


id: GO:0034540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-monobromobisphenol A + 2 H+ + 2 e- = bisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-monobromobisphenol A reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034540"}


id: GO:0045943
data:
  {"annotated_genes":["SJAG_01149","SJAG_05187","SJAG_02608","SJAG_01764"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88230,103141,106755,113148],"is_not":false,"summary":null,"term":"GO:0045943"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase I.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"positive regulation of transcription from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"stimulation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0045943","terms_by_termid":{"GO:0045943":null}}


id: PBO:0087446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit I of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits; number of introns in different strains varies from 2 to 8, with most strains having 4-6 introns","termid":"PBO:0087446"}


id: SO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-formyl-2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_formyl_two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:095"],"synonyms":[{"name":"5-formyl-2'-O-methylcytidine","type":"exact"},{"name":"f5Cm","type":"exact"},{"name":"five formyl two prime O methylcytidine","type":"exact"}],"termid":"SO:0001293"}


id: PBO:0082500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex; removes 5' cap structure from mRNAs prior to their degradation; also enters nucleus and positively regulates transcription initiation; nudix hydrolase family member; forms cytoplasmic foci upon DNA replication stress; human homolog DCP2 complements yeast dcp2 thermosensitive mutant","termid":"PBO:0082500"}


id: PBO:0073850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 3' UTR overlapping transcript 1","termid":"PBO:0073850"}


id: GO:1902672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","ISBN:9780124260207","GOC:giardia","PMID:5961344","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right anterior flagellum","termid":"GO:0097555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"right anterior basal body","synonyms":[{"name":"cilial basal body of right anterior cilium","type":"exact"},{"name":"cilial basal body of right anterior flagellum","type":"exact"},{"name":"ciliary basal body of right anterior cilium","type":"exact"},{"name":"ciliary basal body of right anterior flagellum","type":"exact"},{"name":"cilium basal body of right anterior cilium","type":"exact"},{"name":"cilium basal body of right anterior flagellum","type":"exact"},{"name":"microtubule basal body of right anterior cilium","type":"exact"},{"name":"microtubule basal body of right anterior flagellum","type":"exact"},{"name":"right anterior flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902672"}


id: PBO:0050538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haptoglobin-related protein","termid":"PBO:0050538"}


id: FYPO:0002420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce cell that has an abnormal shape and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002420"}


id: PBO:0061269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 2","termid":"PBO:0061269"}


id: GO:0003918
data:
  {"annotated_genes":["SJAG_05295","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86500,102367],"is_not":false,"summary":null,"term":"GO:0003918"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined, driven by ATP hydrolysis. The enzyme changes the linking number in multiples of 2.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03567":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.6.2.2","Wikipedia:Type_II_topoisomerase","GO:0061505","MetaCyc:5.99.1.3-RXN"],"synonyms":[{"name":"DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"DNA topoisomerase II","type":"narrow"},{"name":"DNA topoisomerase II activity","type":"narrow"},{"name":"DNA topoisomerase IV activity","type":"narrow"},{"name":"DNA topoisomerase type II activity","type":"exact"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"deoxyribonucleic topoisomerase activity","type":"broad"},{"name":"topoisomerase","type":"broad"},{"name":"topoisomerase II","type":"narrow"},{"name":"type II DNA topoisomerase activity","type":"related"}],"termid":"GO:0003918","terms_by_termid":{"GO:0003918":null}}


id: PBO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase A","termid":"PBO:0051947"}


id: PBO:0049774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 1","termid":"PBO:0049774"}


id: PBO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 24","termid":"PBO:0050168"}


id: PBO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 3 pseudogene","termid":"PBO:0061915"}


id: SO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Transposable_element"],"synonyms":[{"name":"transposable element","type":"exact"},{"name":"transposon","type":"exact"}],"termid":"SO:0000101"}


id: FYPO:0005182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased when the cell is exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation during cellular response to UV","synonyms":[{"name":"decreased protein breakdown during cellular response to UV","type":"exact"},{"name":"decreased protein catabolic process during cellular response to UV","type":"exact"},{"name":"decreased protein catabolism during cellular response to UV","type":"exact"},{"name":"decreased protein degradation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased protein degradation during cellular response to ultraviolet light","type":"exact"},{"name":"reduced protein degradation during cellular response to UV","type":"exact"}],"termid":"FYPO:0005182"}


id: PBO:0081303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF84 divergent transcript","termid":"PBO:0081303"}


id: PBO:0053350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 240","termid":"PBO:0053350"}


id: PBO:0030396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus:cytoplasm_ratio","termid":"PBO:0030396"}


id: PBO:0087815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIA large subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa2p, for ribosomal protein gene transcription in vivo; homologous to largest and second largest subunits of human and Drosophila TFIIA","termid":"PBO:0087815"}


id: FYPO:0006222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more phosphatidylinositol phosphates measured in the plasma membrane is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased phosphatidylinositol phosphate level in plasma membrane","synonyms":[{"name":"decreased phosphatidylinositol phosphate level in cell membrane during vegetative growth","type":"exact"},{"name":"decreased phosphatidylinositol phosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol phosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol phosphate level during vegetative growth","type":"exact"},{"name":"reduced phosphatidylinositol phosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006222"}


id: PBO:0050481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A10","termid":"PBO:0050481"}


id: GO:0046049
data:
  {"annotated_genes":["SJAG_04709","SJAG_00964","SJAG_00197","SJAG_03164","SJAG_00694","SJAG_00444","SJAG_04354","SJAG_03708","SJAG_04713","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94674,112882,89598,85660,108096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[89145,84681,88151,83698,111079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UMP, uridine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UMP metabolism","type":"exact"}],"termid":"GO:0046049","terms_by_termid":{"GO:0044205":null,"GO:0044206":null}}


id: PBO:0089357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside 2-deoxyribosyltransferase","termid":"PBO:0089357"}


id: PBO:0056832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT2 pseudogene 1","termid":"PBO:0056832"}


id: PBO:0058661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6789","termid":"PBO:0058661"}


id: GO:0061688
data:
  {"annotated_genes":["SJAG_00633","SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94362,107756],"is_not":false,"summary":null,"term":"GO:0061688"}]},"cv_name":"biological_process","definition":"A glycolytic process in which the glucose is catabolized to pyruvate by first entering the Entner-Doudoroff pathway to yield pyruvate and glyceraldehyde-3-phosphate. The glyceraldehyde-3-phosphate is subsequently converted to pyruvate by the core glycolytic enzymes.","definition_xrefs":["PMID:9657988","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"glycolytic process via Entner-Doudoroff Pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"gluconate pathway","type":"related"}],"termid":"GO:0061688","terms_by_termid":{"GO:0061688":null}}


id: PBO:0003608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase (predicted)","termid":"PBO:0003608"}


id: GO:0075253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of uredospore formation","termid":"GO:0075252"},{"relation_name":"positively_regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uredospore formation","synonyms":[{"name":"positive regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075253"}


id: PBO:0048247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12H","termid":"PBO:0048247"}


id: PBO:0045557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8 pseudogene 1","termid":"PBO:0045557"}


id: GO:0042140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form small, electron dense structures in association with meiotic chromosomes during pachytene. Involved in the catalysis crossing over.","definition_xrefs":["GOC:jl","PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination nodule assembly","termid":"GO:0007146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0065003","GO:0006310","GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"late meiotic recombination nodule assembly","termid":"GO:0042140"}


id: PBO:0053886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1166","termid":"PBO:0053886"}


id: GO:0023041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an activated neuronal cell receptor conveys information down a signaling pathway, resulting in a change in the function or state of a cell. This process may be intracellular or intercellular.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuronal signal transduction","termid":"GO:0023041"}


id: GO:0036427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-undecaprenyl phosphate + GDP-alpha-D-mannose = D-mannosyl undecaprenyl phosphate + GDP.","definition_xrefs":["RHEA:28118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0047267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"all-trans-undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0036427"}


id: PBO:0039819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 3","termid":"PBO:0039819"}


id: PBO:0028808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028808"}


id: PBO:0054415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1811","termid":"PBO:0054415"}


id: GO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate.","definition_xrefs":["MetaCyc:2.7.1.152-RXN","RHEA:12793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 5-kinase activity","secondary_identifiers":["EC:2.7.4.21","KEGG_REACTION:R09087"],"synonyms":[{"name":"ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity","type":"exact"}],"termid":"GO:0000832"}


id: PBO:0047983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member K, pseudogene","termid":"PBO:0047983"}


id: PBO:0052632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8","termid":"PBO:0052632"}


id: FYPO:0003323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which succinate dehydrogenase (ubiquinone) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished succinate dehydrogenase (ubiquinone) activity","synonyms":[{"name":"succinate dehydrogenase (ubiquinone) activity abolished","type":"exact"}],"termid":"FYPO:0003323"}


id: GO:0040033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of small regulatory non-coding RNAs (sRNAs). sRNAs are 20-500 nucleotides in length and found in bacteria.","definition_xrefs":["PMID:2468565","PMID:12460531","PMID:33963446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"sRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"RNA-mediated gene silencing by inhibition of translation","type":"broad"},{"name":"downregulation of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"inhibition of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"sRNA-mediated gene silencing","type":"broad"},{"name":"small RNA-mediated gene silencing","type":"exact"}],"termid":"GO:0040033"}


id: GO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the cell outer membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of cell outer membrane","synonyms":[{"name":"extrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031244"}


id: PATO:0001389
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An aneuploidy quality inhering in a bearer by virtue of the bearer's containing three, instead of two, chromosomes of a particular numbered type in an organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Trisomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"PATO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy","termid":"PATO:0001389"}


id: SO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short, non coding transcript of loop-derived sequences encoded in precursor miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loR","synonyms":[{"name":"loop-origin miRs","type":"exact"}],"termid":"SO:0002033"}


id: PBO:0066197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM15 antisense RNA 1","termid":"PBO:0066197"}


id: GO:0035800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a deubiquitinase.","definition_xrefs":["ISBN:0120793709","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"deubiquitinase activator activity","termid":"GO:0035800"}


id: PBO:0027272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0027272"}


id: FYPO:0003549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during one or both meiotic nuclear divisions. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization during meiosis","synonyms":[{"name":"abnormal cellular protein localisation during meiosis","type":"exact"},{"name":"abnormal cellular protein localization during meiosis","type":"exact"},{"name":"abnormal protein localisation during meiosis","type":"exact"},{"name":"abnormal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003549"}


id: FYECO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which TOP-53 (a drug that targets topoisomerase II) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ TOP-53","termid":"FYECO:0000313"}


id: GO:0097554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the left anterior basal body, extends laterally through the cytoplasm, crosses the right anterior axoneme, and exits as a membrane-bound flagellum on the anterior left side of the cell.","definition_xrefs":["PMID:16607022","PMID:5961344","ISBN:9780124260207","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left anterior flagellum","synonyms":[{"name":"left anterior cilium","type":"exact"}],"termid":"GO:0097554"}


id: GO:0030322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accomplishment of a non-fluctuating membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stabilization of membrane potential","termid":"GO:0030322"}


id: PBO:0078703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 5-1","termid":"PBO:0078703"}


id: GO:0019231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The perception of the orientation of different parts of the body with respect to one another.","definition_xrefs":["ISBN:072168677X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perception of static position","termid":"GO:0019231"}


id: GO:0097705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","GOC:BHF","PMID:21768538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to pulsatile fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to pulsatile fluid shear stress","type":"exact"}],"termid":"GO:0097705"}


id: PBO:0029772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_shape","termid":"PBO:0029772"}


id: GO:0015292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transport of a single molecular species across a membrane; transport is independent of the movement of any other molecular species.","definition_xrefs":["ISBN:0815340729","PMID:10839820","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"uniporter activity","synonyms":[{"name":"facilitated diffusion carrier","type":"exact"},{"name":"single-species transporter activity","type":"exact"},{"name":"uniport","type":"related"}],"termid":"GO:0015292"}


id: PBO:0034055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by","termid":"PBO:0034055"}


id: PR:P38938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cek1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P38938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.11c","synonyms":[{"name":"Spom972h-cek1","type":"exact"}],"termid":"PR:P38938"}


id: GO:0160169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=21 or pseudo T=21 symmetry.","definition_xrefs":["VZ:833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=21/pseudo21 icosahedral capsid","termid":"GO:0160169"}


id: PR:Q9UTF8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ugo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein ugo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.02c","synonyms":[{"name":"Spom972h-ugo1","type":"exact"}],"termid":"PR:Q9UTF8"}


id: GO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of cytidine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"wobble position cytosine ribose methylation","termid":"GO:0002131"}


id: GO:0003980
data:
  {"annotated_genes":["SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109952],"is_not":false,"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins.","definition_xrefs":["PMID:10764828","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-548884","RHEA:61304"],"synonyms":[{"name":"UGGT activity","type":"exact"}],"termid":"GO:0003980","terms_by_termid":{"GO:0003980":null}}


id: GO:0014886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of slow-contracting muscle fibers to a faster character. This may involve increasing of contractile rate, fast myosin gene induction, increase in glycolytic metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between slow and fast fiber","synonyms":[{"name":"transition between slow and fast fibre","type":"exact"},{"name":"transition slow-fast fiber","type":"exact"},{"name":"transition slow-fast fibre","type":"exact"}],"termid":"GO:0014886"}


id: PBO:0032707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_error-prone_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032707"}


id: PBO:0033777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_resulting_in_peripheral_chromatin_distribution","termid":"PBO:0033777"}


id: GO:0051386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the neurotrophin TRK receptor signaling pathway.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"neurotrophin TRK receptor signaling pathway","termid":"GO:0048011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of neurotrophin TRK receptor signaling pathway","synonyms":[{"name":"regulation of NGF receptor signaling pathway","type":"exact"},{"name":"regulation of NGF receptor signalling pathway","type":"exact"},{"name":"regulation of nerve growth factor receptor signaling pathway","type":"related"},{"name":"regulation of nerve growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0051386"}


id: GO:1903982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microvillus length","synonyms":[{"name":"down regulation of regulation of microvillus length","type":"exact"},{"name":"down-regulation of regulation of microvillus length","type":"exact"},{"name":"downregulation of regulation of microvillus length","type":"exact"},{"name":"inhibition of regulation of microvillus length","type":"narrow"}],"termid":"GO:1903982"}


id: GO:0006223
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88152],"is_not":false,"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase salvage","termid":"GO:0043100"},{"relation_name":"is_a","term_name":"uracil biosynthetic process","termid":"GO:0046107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"uracil salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006223","terms_by_termid":{"GO:0006223":null}}


id: PBO:0049585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 3","termid":"PBO:0049585"}


id: FYPO:0000889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000880"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 trimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 trimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000889"}


id: GO:0047867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3,3-dimethylmalate + NAD+ = 3-methyl-2-oxobutanoate + CO2 + NADH.","definition_xrefs":["RHEA:13321","EC:1.1.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dimethylmalate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01211","MetaCyc:DIMETHYLMALATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-3,3-dimethylmalate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"beta,beta-dimethylmalate dehydrogenase activity","type":"related"}],"termid":"GO:0047867"}


id: GO:0098545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"is_a","term_name":"maintenance of protein complex location","termid":"GO:0098544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein complex location in cytoplasm","termid":"GO:0098545"}


