# terms

id: PBO:0108544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex MRG family subunit Alp13","termid":"PBO:0108544"}


id: GO:1905398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD4-positive, alpha-beta T cell.","definition_xrefs":["PMID:24187568","GO_REF:0000085","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905398"}


id: GO:0060944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neural crest cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell fate commitment","termid":"GO:0060944"}


id: PBO:0053500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 482","termid":"PBO:0053500"}


id: GO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a inadequate blood supply.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ischemia","termid":"GO:0002931"}


id: PBO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit Snt2","termid":"PBO:0001259"}


id: MOD:01112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinoyl lysine","synonyms":[{"name":"nicotinyl lysyl","type":"exact"}],"termid":"MOD:01112"}


id: PBO:0081744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF674 antisense RNA 1 (head to head)","termid":"PBO:0081744"}


id: PBO:0067322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 413, pseudogene","termid":"PBO:0067322"}


id: PR:O13809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C17H9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.12c","synonyms":[{"name":"Spom972h-SPAC17H9.12c","type":"exact"}],"termid":"PR:O13809"}


id: SO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attC site is a sequence required for the integration of a DNA of an integron.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"integron","termid":"SO:0000365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attC_site","synonyms":[{"name":"attC site","type":"exact"}],"termid":"SO:0000950"}


id: PBO:0065435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 8","termid":"PBO:0065435"}


id: GO:0005736
data:
  {"annotated_genes":["SJAG_01128","SJAG_03956","SJAG_01562","SJAG_02871","SJAG_01444","SJAG_01313","SJAG_03468","SJAG_01948","SJAG_04106","SJAG_01698","SJAG_01765","SJAG_02653","SJAG_03144","SJAG_02101","SJAG_00731","SJAG_03578","SJAG_04261","SJAG_02070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83911,83912,85760,86585,88209,90086,91924,98705,98849,99510,101045,101954,105967,106867,109323,109695,109696,109980,110388,111676],"is_not":false,"summary":null,"term":"GO:0005736"}]},"cv_name":"cellular_component","definition":"RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"RNA polymerase I complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase I activity","type":"related"},{"name":"DNA-directed RNA polymerase I complex","type":"exact"}],"termid":"GO:0005736","terms_by_termid":{"GO:0005736":null}}


id: PBO:0034566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_J-shaped_vegetative_cell_with_curved_cytoplasmic_microtubules","termid":"PBO:0034566"}


id: GO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"leucoanthocyanidin metabolic process","secondary_identifiers":["MetaCyc:PWY1F-823"],"synonyms":[{"name":"leucoanthocyanidin metabolism","type":"exact"}],"termid":"GO:0051556"}


id: PBO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 like","termid":"PBO:0047731"}


id: GO:0045162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated sodium channels become localized together in high densities. In animals, nodes of Ranvier differ dramatically from internodal axonal regions in very high densities of voltage-dependent sodium (Nav) channels responsible for the rapid, inward ionic currents that produce membrane depolarization.","definition_xrefs":["PMID:11456440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ion channel clustering","termid":"GO:0045161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"clustering of voltage-gated sodium channels","synonyms":[{"name":"Nav channel clustering","type":"exact"},{"name":"clustering of voltage gated sodium channels","type":"exact"},{"name":"clustering of voltage-dependent sodium channels","type":"exact"},{"name":"voltage-gated sodium channel clustering","type":"exact"}],"termid":"GO:0045162"}


id: PBO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase (predicted)","termid":"PBO:0001761"}


id: GO:0000794
data:
  {"annotated_genes":["SJAG_04950","SJAG_03843","SJAG_04303","SJAG_07002","SJAG_01677","SJAG_00172","SJAG_05333","SJAG_04748","SJAG_01605","SJAG_03418","SJAG_02267","SJAG_02771","SJAG_02652","SJAG_03026","SJAG_02490","SJAG_03438","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85371,87114,89053,95220,96702],"is_not":false,"summary":null,"term":"GO:0000794"},{"annotations":[95347,87605,88702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030896"},{"annotations":[105838,105741,86541,111689,90921,85271,101039,107303,87652],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030998"}]},"cv_name":"cellular_component","definition":"A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct nuclear chromosome.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"is_a","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00172":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_02267":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03418":null,"SJAG_03438":null,"SJAG_03843":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05333":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"condensed nuclear chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic chromosome","type":"related"},{"name":"nuclear mitotic chromosome","type":"related"}],"termid":"GO:0000794","terms_by_termid":{"GO:0000794":null,"GO:0030896":null,"GO:0030998":null}}


id: PBO:0071253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 94","termid":"PBO:0071253"}


id: GO:1905338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cohesin unloading.","definition_xrefs":["GO_REF:0000058","PMID:26687354","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"positive regulation of sister chromatid cohesion","termid":"GO:0045876"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of cohesin unloading","termid":"GO:1905343"},{"relation_name":"negatively_regulates","term_name":"cohesin unloading","termid":"GO:0061774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cohesin unloading","synonyms":[{"name":"downregulation of cohesin unloading","type":"exact"},{"name":"down regulation of cohesin unloading","type":"exact"},{"name":"down-regulation of cohesin unloading","type":"exact"},{"name":"inhibition of cohesin unloading","type":"narrow"}],"termid":"GO:1905338"}


id: GO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif).","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RHG protein domain binding","synonyms":[{"name":"RHG domain binding","type":"exact"},{"name":"iap binding domain binding","type":"exact"},{"name":"inhibitor of apoptosis binding domain binding","type":"exact"},{"name":"reaper hid grim domain binding","type":"exact"}],"termid":"GO:0089719"}


id: GO:0003085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that reduces the force with which blood travels through the systemic arterial circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood pressure","termid":"GO:0045776"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}


id: GO:0050298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-L-phenylalanine + O2 = 5-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-semialdehyde.","definition_xrefs":["EC:1.13.11.30","MetaCyc:STIZOLOBINATE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"stizolobinate synthase activity","secondary_identifiers":["RHEA:18465"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:oxygen 2,3-oxidoreductase (recyclizing)","type":"related"}],"termid":"GO:0050298"}


id: GO:1904389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a rod bipolar cell.","definition_xrefs":["GO_REF:0000086","PMID:16914133","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rod bipolar cell differentiation","termid":"GO:1904389"}


id: GO:0070476
data:
  {"annotated_genes":["SJAG_02281","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91077,92394],"is_not":false,"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"is_a","term_name":"rRNA base methylation","termid":"GO:0070475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02281":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"rRNA (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070476","terms_by_termid":{"GO:0070476":null}}


id: FYECO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any series of two or more different sets of conditions used in a single experiment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping sequential growth conditions","termid":"FYECO:0000094"}


id: FYPO:0003894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to rotenone. Cells stop growing (and may die) at a concentration of rotenone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to rotenone","synonyms":[{"name":"hypersensitive to rotenone","type":"exact"},{"name":"sensitive to rotenone during mitotic cell cycle","type":"related"},{"name":"sensitive to rotenone during vegetative growth","type":"exact"}],"termid":"FYPO:0003894"}


id: SO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Large Retrotransposon Derivative elements are long-terminal repeats that contain reverse transcriptase priming sites and are conserved in sequence but contain no open reading frames encoding typical retrotransposon proteins . The LARDs identified in barley and other Triticeae have LTRs ~5.5 kb and an interal domain of ~3.5 kb. LARDs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:15082561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARD","synonyms":[{"name":"Large Retrotransposon Derivative","type":"exact"},{"name":"large_retrotransposon_derivative","type":"exact"}],"termid":"SO:0002260"}


id: PBO:0076809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance 2","termid":"PBO:0076809"}


id: PBO:0111485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD S5 small phosphatase Psr1","termid":"PBO:0111485"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["GOC:pz","EC:2.3.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lecithin:11-cis retinol acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12563"],"termid":"GO:0102279"}


id: FYPO:0000295
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115669],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115239,115273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115398],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115635],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115684,115603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115670],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects cytoskeleton organization. Cytoskeleton organization results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GO:0007010","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization phenotype","termid":"FYPO:0000334"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_01143","SJAG_03596","SJAG_02392","SJAG_04522"],"name":"cytoskeleton organization phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_04280","SJAG_04703","SJAG_02392","SJAG_04522","SJAG_03596","SJAG_01143"],"single_locus_genotype_uniquenames":["for3delta","mid1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","rga4delta","sty1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cytoskeleton organisation phenotype","type":"exact"},{"name":"fission yeast cytoskeleton organization phenotype","type":"exact"}],"termid":"FYPO:0000295","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensor for misfolded ER glycoproteins Yos9 (predicted)","termid":"PBO:0000419"}


id: GO:1901046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of egg-laying behavior","synonyms":[{"name":"activation of egg laying","type":"broad"},{"name":"activation of egg-laying","type":"broad"},{"name":"activation of oviposition","type":"narrow"},{"name":"positive regulation of egg laying","type":"broad"},{"name":"positive regulation of egg-laying","type":"broad"},{"name":"positive regulation of oviposition","type":"exact"},{"name":"up regulation of egg laying","type":"broad"},{"name":"up regulation of egg-laying","type":"broad"},{"name":"up regulation of oviposition","type":"exact"},{"name":"up-regulation of egg laying","type":"broad"},{"name":"up-regulation of egg-laying","type":"broad"},{"name":"up-regulation of oviposition","type":"exact"},{"name":"upregulation of egg laying","type":"broad"},{"name":"upregulation of egg-laying","type":"broad"},{"name":"upregulation of oviposition","type":"exact"}],"termid":"GO:1901046"}


id: PBO:0089240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body half bridge protein, centrin Cdc31","termid":"PBO:0089240"}


id: PBO:0090868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase Trm12","termid":"PBO:0090868"}


id: PR:Q10210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1 complex subunit swc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.02c","synonyms":[{"name":"Spom972h-swc3","type":"exact"}],"termid":"PR:Q10210"}


id: PBO:0111347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, CGI-48 family Utp18","termid":"PBO:0111347"}


id: PBO:0017054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 nucleotide exchange factor Fes1 (predicted)","termid":"PBO:0017054"}


id: FYPO:0006831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis begins later than normal.","definition_xrefs":["GO:0031671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of primary cell septum biogenesis","synonyms":[{"name":"delayed onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"delayed onset of primary cell septum formation","type":"exact"},{"name":"delayed onset of primary septum biogenesis","type":"exact"},{"name":"delayed onset of primary septum synthesis","type":"related"},{"name":"delayed primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006831"}


id: PBO:0085220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase with autoacylation activity; likely functions in pathway(s) outside Ras; member of a family of putative palmitoyltransferases containing an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain","termid":"PBO:0085220"}


id: GO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + 2 oxidized ferredoxin = L-glutamine + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + 2 oxidized ferredoxin + H2O = NH3 + 2-oxoglutarate + 2 reduced ferredoxin + 2 H+.","definition_xrefs":["EC:1.4.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","termid":"GO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutamate synthase (ferredoxin) activity","secondary_identifiers":["RHEA:12128","MetaCyc:GLUTAMATE-SYNTHASE-FERREDOXIN-RXN","MetaCyc:PWY-4341"],"synonyms":[{"name":"L-glutamate:ferredoxin oxidoreductase (transaminating)","type":"related"},{"name":"ferredoxin-dependent glutamate synthase activity","type":"related"},{"name":"ferredoxin-glutamate synthase activity","type":"related"},{"name":"glutamate synthase (ferredoxin-dependent)","type":"related"}],"termid":"GO:0016041"}


id: GO:0042632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of cholesterol within an organism or cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol homeostasis","termid":"GO:0055092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholesterol homeostasis","secondary_identifiers":["GO:2000188","GO:2000189"],"synonyms":[{"name":"positive regulation of cholesterol homeostasis","type":"related"},{"name":"regulation of cholesterol homeostasis","type":"related"}],"termid":"GO:0042632"}


id: PR:O13878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 75 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.13","secondary_identifiers":["UniProtKB:O13878"],"synonyms":[{"name":"Spom972h-WDR75","type":"exact"},{"name":"U3 protein 17 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13878"}


id: PBO:0089824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1 GEF Efc25","termid":"PBO:0089824"}


id: PBO:0078013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 3","termid":"PBO:0078013"}


id: PBO:0057415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548p","termid":"PBO:0057415"}


id: GO:0002699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune effector process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"positively_regulates","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune effector process","synonyms":[{"name":"activation of immune effector process","type":"narrow"},{"name":"stimulation of immune effector process","type":"narrow"},{"name":"up regulation of immune effector process","type":"exact"},{"name":"up-regulation of immune effector process","type":"exact"},{"name":"upregulation of immune effector process","type":"exact"}],"termid":"GO:0002699"}


id: FYPO:0000586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall assembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall assembly","termid":"FYPO:0000175"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000121","FYPO:0005447","FYPO:0000002","FYPO:0004805"],"is_obsolete":false,"name":"abolished ascospore wall assembly","synonyms":[{"name":"absent spore wall formation","type":"related"},{"name":"ascospore wall assembly abolished","type":"exact"},{"name":"spore wall formation abolished","type":"related"},{"name":"spore wall formation: absent","type":"related"}],"termid":"FYPO:0000586"}


id: PBO:0003154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof13","termid":"PBO:0003154"}


id: PBO:0027325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027325"}


id: GO:0005164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tumor necrosis factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"tumor necrosis factor receptor binding","synonyms":[{"name":"TNF receptor binding","type":"exact"},{"name":"tumor necrosis factor","type":"narrow"},{"name":"tumor necrosis factor receptor ligand","type":"narrow"}],"termid":"GO:0005164"}


id: PBO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasite_of","termid":"PBO:0017449"}


id: PBO:0041839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 19","termid":"PBO:0041839"}


id: PBO:0048637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 6, pseudogene","termid":"PBO:0048637"}


id: PBO:0089947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC2 serine/threonine protein kinase Tor1","termid":"PBO:0089947"}


id: PBO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus branch site","termid":"PBO:0002226"}


id: PBO:0059744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 18","termid":"PBO:0059744"}


id: PBO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex CAF1 family ribonuclease subunit Caf1","termid":"PBO:0005706"}


id: GO:0070625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of intracellular molecules contained within the zymogen granule by fusion of the granule with the plasma membrane of the oocyte, requiring calcium ions.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:17442889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zymogen granule exocytosis","termid":"GO:0070625"}


id: PBO:0079662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 10","termid":"PBO:0079662"}


id: PBO:0058519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5707","termid":"PBO:0058519"}


id: GO:0034315
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034315","terms_by_termid":{"GO:0034316":null}}


id: PBO:0091048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase regulatory subunit Dpm2","termid":"PBO:0091048"}


id: PBO:0087494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DUBm module of SAGA and SLIK; has roles in anchoring deubiquitination module (DUBm) into SAGA and SLIK complexes, maintaining organization and ubiquitin-binding conformation of Ubp8p, thereby contributing to overall DUBm activity; involved in preinitiation complex assembly at promoters; relocalizes to cytosol under hypoxia; human homolog ATXN7 implicated in spinocerebellar ataxia, and can complement yeast null mutant","termid":"PBO:0087494"}


id: GO:0018618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + NADPH + H+ + O2 = catechol + CO2 + NADP+ + NH3.","definition_xrefs":["EC:1.14.12.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthranilate 1,2-dioxygenase (deaminating, decarboxylating) activity","secondary_identifiers":["UM-BBD_reactionID:r0577","MetaCyc:1.14.12.1-RXN"],"synonyms":[{"name":"AntA","type":"related"},{"name":"AntB","type":"related"},{"name":"AntC","type":"related"},{"name":"anthranilate 1,2-dioxygenase","type":"related"},{"name":"anthranilate dioxygenase activity","type":"exact"},{"name":"anthranilate dioxygenase reductase","type":"narrow"},{"name":"anthranilate hydroxylase activity","type":"broad"},{"name":"anthranilate,NAD(P)H:oxygen oxidoreductase (1,2-hydroxylating, deaminating, decarboxylating)","type":"related"},{"name":"anthranilic acid hydroxylase activity","type":"broad"},{"name":"anthranilic hydroxylase activity","type":"broad"}],"termid":"GO:0018618"}


id: GO:0016494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-X-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif.","definition_xrefs":["GOC:signaling","PMID:8662823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-X-C chemokine receptor activity","termid":"GO:0016494"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: PBO:0066163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBFA downstream neighbor","termid":"PBO:0066163"}


id: PBO:0057911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3614","termid":"PBO:0057911"}


id: MOD:00272
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and 5'-phosphoadenosine through a phosphodiester bond to form O-(phospho-5'-adenosine)-L-threonine.","definition_xrefs":["Unimod:405#T","PubMed:2989287","PubMed:8917428","RESID:AA0267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-adenosine)-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(5'-adenosine phosphonoxy)butanoic acid","type":"exact"},{"name":"5'-adenylic-O3-L-threonine","type":"exact"},{"name":"ACT_SITE O-AMP-threonine intermediate","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-threonine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"MOD_RES O-AMP-threonine","type":"exact"},{"name":"O(gamma)-5'-adenylic-L-threonine","type":"exact"},{"name":"O-(phospho-5'-adenosine)-L-threonine","type":"exact"},{"name":"O3-(phospho-5'-adenosine)-L-threonine","type":"exact"},{"name":"O3-L-threonine 5'-adenosine phosphodiester","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"beta-5'-adenylic-L-threonine","type":"exact"}],"termid":"MOD:00272"}


id: PATO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n AND has_part > 0 of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"lacks parts or has fewer parts of type","termid":"PATO:0001999"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has fewer parts of type","secondary_identifiers":["PATO:0001569"],"synonyms":[{"name":"decreased number of","type":"exact"},{"name":"has decreased number of","type":"exact"},{"name":"has fewer physical parts of type","type":"exact"}],"termid":"PATO:0002001"}


id: FYPO:0005015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which rRNA modification, the covalent alteration of one or more nucleotides within an rRNA molecule, is abnormal.","definition_xrefs":["GO:0000154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal rRNA modification","synonyms":[{"name":"abnormal rRNA modification during mitotic cell cycle","type":"related"},{"name":"abnormal rRNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0005015"}


id: PBO:0052884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-7","termid":"PBO:0052884"}


id: PBO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3 (predicted)","termid":"PBO:0013745"}


id: PBO:0041072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP/retinoic acid inducible neural specific 1","termid":"PBO:0041072"}


id: PBO:0086654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to vacuole; not an essential gene; YNL058C has a paralog, PRM5, that arose from the whole genome duplication","termid":"PBO:0086654"}


id: PBO:0082523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-cycle checkpoint S/T protein kinase; required for transient G2/M arrest after DNA damage, damage-induced transcription, and nuclear-to-cytoplasmic redistribution of Rnr2p-Rnr4p after genotoxic stress and iron deprivation; phosphorylates repair protein Rad55p, transcriptional repressor Sml1p, superoxide dismutase, and ribonucleotide reductase inhibitors Crt1p and Dif1p; functions in the Mec1p pathway to regulate dNTP pools and telomere length; postreplicative repair role","termid":"PBO:0082523"}


id: PBO:0058139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-1","termid":"PBO:0058139"}


id: PATO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that is almost an ellipse.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subelliptical","termid":"PATO:0005004"}


id: GO:0021881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell that contributes to the commitment of a neuroblast to aneuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls","PMID:16226447"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt-activated signaling pathway involved in forebrain neuron fate commitment (obsolete GO:0021881)","synonyms":[{"name":"Wnt receptor signaling pathway involved in forebrain neuron fate commitment","type":"exact"},{"name":"Wnt receptor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021881"}


id: PBO:0041832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 8","termid":"PBO:0041832"}


id: GO:1900865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any RNA modification that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast RNA modification","synonyms":[{"name":"RNA editing in chloroplast","type":"narrow"}],"termid":"GO:1900865"}


id: PBO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Sal3","termid":"PBO:0005811"}


id: PBO:0066745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 43","termid":"PBO:0066745"}


id: GO:0034555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,3'-dibromobisphenol A + 2 H+ + 2 e- = 3-monobromobisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3,3'-dibromobisphenol A reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034555"}


id: PATO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's indirect development, undergoing metamorphosis.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Larval"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larval","termid":"PATO:0001185"}


id: PBO:0065943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 3","termid":"PBO:0065943"}


id: PBO:0074091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 6","termid":"PBO:0074091"}


id: FYPO:0004613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the spindle pole body is not attached to any interphase cytoplasmic microtubules; as a result, the microtubules are not connected to the nucleus. Normally, the spindle pole body is attached to at least one cytoplasmic microtubule bundle.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished microtubule attachment to spindle pole body","synonyms":[{"name":"SPB detached from cytoplasmic microtubules","type":"exact"},{"name":"abolished microtubule attachment to nucleus","type":"broad"},{"name":"abolished microtubule attachment to spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished microtubule attachment to spindle pole body during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules absent from mitotic spindle pole body","type":"exact"},{"name":"cytoplasmic microtubules detached from spindle pole body","type":"exact"},{"name":"interphase microtubules detached from nucleus","type":"exact"},{"name":"interphase microtubules detached from spindle pole body","type":"exact"},{"name":"spindle pole body detached from cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0004613"}


id: PR:Q10330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.18","synonyms":[{"name":"Spom972h-rpl2501","type":"exact"}],"termid":"PR:Q10330"}


id: GO:0035230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin, polarized cell projection that contains actin and can extend for distances many times the diameter of the cell. Cytonemes represent extensions of cell cytoplasm and typically have a diameter of approximately 0.2um.","definition_xrefs":["PMID:10367889","PMID:10675901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoneme","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"membrane nanotube","type":"exact"}],"termid":"GO:0035230"}


id: PBO:0054626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2031","termid":"PBO:0054626"}


id: GO:0006668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphinganine-1-phosphate metabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate metabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate metabolism","type":"exact"},{"name":"sphinganine-1-phosphate metabolism","type":"exact"}],"termid":"GO:0006668"}


id: CL:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A S. pombe cell type determined by mat1-Pc and mat1-Pi on the mat1 locus.","definition_xrefs":["GOC:tfm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H plus","termid":"CL:0002675"}


id: PBO:0068786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 23, pseudogene","termid":"PBO:0068786"}


id: GO:0046826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"negatively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein export from nucleus","synonyms":[{"name":"down regulation of protein export from nucleus","type":"exact"},{"name":"down-regulation of protein export from nucleus","type":"exact"},{"name":"downregulation of protein export from nucleus","type":"exact"},{"name":"inhibition of protein export from nucleus","type":"narrow"},{"name":"negative regulation of protein export from cell nucleus","type":"exact"},{"name":"negative regulation of protein export out of nucleus","type":"exact"},{"name":"negative regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of protein-nucleus export","type":"exact"}],"termid":"GO:0046826"}


id: PBO:0085510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S12, no bacterial homolog","termid":"PBO:0085510"}


id: GO:0100011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that positively_regulates fever generation.","definition_xrefs":["GOC:obol","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"},{"relation_name":"positively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fever generation by prostaglandin secretion","termid":"GO:0100011"}


id: PBO:0083546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene","termid":"PBO:0083546"}


id: PBO:0060541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 1","termid":"PBO:0060541"}


id: PBO:0058983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT1 super elongation complex subunit","termid":"PBO:0058983"}


id: GO:0038104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing at least a type II activin receptor, a type I activin receptor, and a coreceptor (EGF-CFC protein) such as Cripto or Cryptic. Nodal receptor complexes are capable of binding a nodal protein and transducing the signal into the cell.","definition_xrefs":["PMID:15062104","PMID:11024047","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nodal receptor complex","synonyms":[{"name":"ActRIIB.ALK4.EGF-CFC complex","type":"narrow"}],"termid":"GO:0038104"}


id: PR:Q9USL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.08c","secondary_identifiers":["UniProtKB:Q9USL3"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS2","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL3"}


id: SO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that encodes multiple proteins from at least two non-overlapping regions.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Polycistronic_mRNA"],"synonyms":[{"name":"polycistronic mRNA","type":"exact"},{"name":"polycistronic processed transcript","type":"related"}],"termid":"SO:0000634"}


id: PATO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having four angles and four sides.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadrangular","termid":"PATO:0001988"}


id: GO:0008358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by gradients of maternally-transcribed gene products; exemplified in insects by the morphogens, bicoid and nanos.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal determination of anterior/posterior axis, embryo","termid":"GO:0008358"}


id: PBO:0026857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_glucose_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0026857"}


id: GO:0019580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactarate, an anion of galactaric acid, the meso-aldaric acid derived from both D- and L-galactose.","definition_xrefs":["ISBN:0198506732","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactarate metabolic process","secondary_identifiers":["GO:0046393"],"synonyms":[{"name":"D-galactarate metabolic process","type":"related"},{"name":"D-galactarate metabolism","type":"related"},{"name":"galactarate metabolism","type":"exact"},{"name":"mucic acid metabolic process","type":"exact"},{"name":"mucic acid metabolism","type":"exact"}],"termid":"GO:0019580"}


id: PBO:0040156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit 2","termid":"PBO:0040156"}


id: PR:C6Y4A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.17 gene.","definition_xrefs":["UniProtKB:C6Y4A9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23D3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.17","synonyms":[{"name":"Spom972h-SPAC23D3.17","type":"exact"}],"termid":"PR:C6Y4A9"}


id: PBO:0082022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member B, cell cycle regulator","termid":"PBO:0082022"}


id: PBO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 22","termid":"PBO:0045832"}


id: GO:1901186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"positively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ERBB signaling pathway","synonyms":[{"name":"activation of EGF receptor family signaling pathway","type":"exact"},{"name":"activation of EGFR family signaling pathway","type":"related"},{"name":"activation of ERBB signaling pathway","type":"narrow"},{"name":"activation of ERBB signalling pathway","type":"exact"},{"name":"activation of ErbB signaling","type":"exact"},{"name":"positive regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"positive regulation of EGFR family signaling pathway","type":"related"},{"name":"positive regulation of ERBB signalling pathway","type":"exact"},{"name":"positive regulation of ErbB signaling","type":"exact"},{"name":"up regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up regulation of EGFR family signaling pathway","type":"related"},{"name":"up regulation of ERBB signaling pathway","type":"exact"},{"name":"up regulation of ERBB signalling pathway","type":"exact"},{"name":"up regulation of ErbB signaling","type":"exact"},{"name":"up-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"up-regulation of EGFR family signaling pathway","type":"related"},{"name":"up-regulation of ERBB signaling pathway","type":"exact"},{"name":"up-regulation of ERBB signalling pathway","type":"exact"},{"name":"up-regulation of ErbB signaling","type":"exact"},{"name":"upregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"upregulation of EGFR family signaling pathway","type":"related"},{"name":"upregulation of ERBB signaling pathway","type":"exact"},{"name":"upregulation of ERBB signalling pathway","type":"exact"},{"name":"upregulation of ErbB signaling","type":"exact"}],"termid":"GO:1901186"}


id: PBO:0063122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 6","termid":"PBO:0063122"}


id: GO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, and of BZ-Arg-OET > Ac-Tyr-OET. Does not hydrolyze peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cerevisin activity (obsolete GO:0004262)","synonyms":[{"name":"baker's yeast proteinase B","type":"related"},{"name":"brewer's yeast proteinase","type":"narrow"},{"name":"cerevisin activity","type":"exact"},{"name":"peptidase beta","type":"related"},{"name":"proteinase yscB activity","type":"narrow"},{"name":"yeast proteinase B activity","type":"narrow"}],"termid":"GO:0004262"}


id: PBO:0030779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methyl_methanesulfonate","termid":"PBO:0030779"}


id: PBO:0002541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein coupled receptor Stm1","termid":"PBO:0002541"}


id: PBO:0053638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 685","termid":"PBO:0053638"}


id: PBO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 129","termid":"PBO:0071127"}


id: GO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotetrameric protein complex that is essential for DNA replication. It supercoils the single-stranded DNA preventing DNA duplexing before the polymerase holoenzyme passes and synthesizes the complementary strand. It is also involved in DNA recombination and repair.","definition_xrefs":["GOC:jl","UniProt:P0AGE0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"nucleoid","termid":"GO:0009295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"single-stranded DNA-binding protein complex","synonyms":[{"name":"SSB complex","type":"exact"}],"termid":"GO:0044777"}


id: PBO:0069036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 281, pseudogene","termid":"PBO:0069036"}


id: PBO:0043022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1A pseudogene 1","termid":"PBO:0043022"}


id: GO:0052754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + factor gamma-F420-2 + H+ = coenzyme F390-G + diphosphate.","definition_xrefs":["MetaCyc:RXN-9385","GOC:mengo_curators","MetaCyc:MONOMER-13942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GTP:coenzyme F420 guanyltransferase activity","synonyms":[{"name":"GTP:coenzyme F420 guanylyltransferase activity","type":"exact"},{"name":"coenzyme F390-G synthetase activity","type":"exact"}],"termid":"GO:0052754"}


id: GO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"positively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagocytosis","synonyms":[{"name":"activation of phagocytosis","type":"narrow"},{"name":"stimulation of phagocytosis","type":"narrow"},{"name":"up regulation of phagocytosis","type":"exact"},{"name":"up-regulation of phagocytosis","type":"exact"},{"name":"upregulation of phagocytosis","type":"exact"}],"termid":"GO:0050766"}


id: PBO:0041719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin 4, pseudogene","termid":"PBO:0041719"}


id: PBO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 1","termid":"PBO:0061267"}


id: PBO:0079851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog A","termid":"PBO:0079851"}


id: PBO:0073573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 1","termid":"PBO:0073573"}


id: PBO:0062079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 10 pseudogene","termid":"PBO:0062079"}


id: PBO:0005352
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.-","termid":"PBO:0005352"}


id: PBO:0056333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 14","termid":"PBO:0056333"}


id: PATO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A turgor which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"turgor","termid":"PATO:0001620"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased turgor","synonyms":[{"name":"low turgor","type":"exact"}],"termid":"PATO:0001621"}


id: PBO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 15","termid":"PBO:0042153"}


id: PBO:0087318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylmethionine-homocysteine methyltransferase; functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio","termid":"PBO:0087318"}


id: PBO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member C","termid":"PBO:0046924"}


id: PBO:0005303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp28 (predicted)","termid":"PBO:0005303"}


id: GO:0046149
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pigment breakdown","type":"exact"},{"name":"pigment catabolism","type":"exact"},{"name":"pigment degradation","type":"exact"}],"termid":"GO:0046149","terms_by_termid":{"GO:0042167":null}}


id: PBO:0070095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 9 pseudogene","termid":"PBO:0070095"}


id: GO:0018169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.","definition_xrefs":["GOC:mah","PMID:2570347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"ribosomal S6-glutamic acid ligase activity","termid":"GO:0018169"}


id: GO:0047453
data:
  {"annotated_genes":["SJAG_03669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113752],"is_not":false,"summary":null,"term":"GO:0047453"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-6beta-hydroxy-1,4,5,6-tetrahydronicotinamide adenine dinucleotide + ATP = ADP + 3 H+ + NADH + phosphate.","definition_xrefs":["RHEA:19017","PMID:3061454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent NAD(P)H-hydrate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00129","MetaCyc:4.2.1.93-RXN","Reactome:R-HSA-6806967","EC:4.2.1.93"],"synonyms":[{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase (ATP-hydrolysing)","type":"related"},{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase(ATP-hydrolysing; NADH-forming)","type":"related"},{"name":"ATP-dependent H(4)NAD(P)OH dehydratase activity","type":"exact"},{"name":"ATP-dependent H4NAD(P)OH dehydratase activity","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide hydrate dehydratase activity","type":"broad"}],"termid":"GO:0047453","terms_by_termid":{"GO:0047453":null}}


id: GO:0051782
data:
  {"annotated_genes":["SJAG_04551","SJAG_06270","SJAG_00883","SJAG_01386","SJAG_04943","SJAG_01790","SJAG_03681","SJAG_02514","SJAG_04455","SJAG_03508","SJAG_00845","SJAG_03048","SJAG_00229","SJAG_03592","SJAG_03353","SJAG_00526","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98540,98314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[95751,106358,112065,89104,87910,101202,103721,97440,91825,89023,89643,95832,86928,103410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"negatively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04551":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell division","type":"exact"},{"name":"down-regulation of cell division","type":"exact"},{"name":"downregulation of cell division","type":"exact"},{"name":"inhibition of cell division","type":"narrow"}],"termid":"GO:0051782","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: GO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: CDP-acylglycerol + arachidonyl-CoA = CDP-diacylglycerol + CoA.","definition_xrefs":["EC:2.3.1.70","MetaCyc:2.3.1.70-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP-acylglycerol O-arachidonoyltransferase activity (obsolete GO:0047193)","synonyms":[{"name":"CDP-acylglycerol O-arachidonoyltransferase activity","type":"exact"},{"name":"CDP-acylglycerol O-arachidonyltransferase activity","type":"exact"},{"name":"CDPacylglycerol O-arachidonyltransferase activity","type":"related"},{"name":"arachidonoyl-CoA:CDP-acylglycerol O-arachidonoyltransferase activity","type":"related"},{"name":"arachidonyl-CoA:CDP-acylglycerol O-arachidonyltransferase activity","type":"related"}],"termid":"GO:0047193"}


id: PBO:0040408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1G2-DDX39B readthrough (NMD candidate)","termid":"PBO:0040408"}


id: PBO:0040312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 4","termid":"PBO:0040312"}


id: PBO:0046443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPN2 intronic transcript 1","termid":"PBO:0046443"}


id: PR:Q9P6J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02344","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-methylisocitrate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.11c","secondary_identifiers":["UniProtKB:Q9P6J1"],"synonyms":[{"name":"Spom972h-aceA","type":"exact"},{"name":"methylisocitrate lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6J1"}


id: GO:0090017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of anterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate formation","termid":"GO:0021990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neural plate formation","termid":"GO:0090017"}


id: SO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Epoxyqueuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxyqueuosine","secondary_identifiers":["RNAMOD:044"],"synonyms":[{"name":"eQ","type":"exact"}],"termid":"SO:0001318"}


id: PBO:0084881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial RNA polymerase; single subunit enzyme similar to those of T3 and T7 bacteriophages; requires a specificity subunit encoded by MTF1 for promoter recognition; Mtf1p interacts with and stabilizes the Rpo41p-promoter complex, enhancing DNA bending and melting to facilitate pre-initiation open complex formation; Rpo41p also synthesizes RNA primers for mitochondrial DNA replication","termid":"PBO:0084881"}


id: GO:2000130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of octopamine or tyramine signaling pathway","termid":"GO:2000127"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway","synonyms":[{"name":"positive regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000130"}


id: PBO:0002835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosyltransferase Och1","termid":"PBO:0002835"}


id: GO:0070926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ATP:ADP antiporter.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of ATP:ADP antiporter activity","termid":"GO:0070926"}


id: SO:0002259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a cluster of experimentally determined polyadenylation sites, typically less than 25 bp in length and associated with a single polyadenylation signal.","definition_xrefs":["PMID:17202160","PMID:24072873","PMID:25906188"],"direct_ancestors":[{"relation_name":"has_part","term_name":"polyA_site","termid":"SO:0000553"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_site_cluster","synonyms":[{"name":"polyA cluster","type":"exact"},{"name":"polyA site cluster","type":"exact"},{"name":"polyA_cluster","type":"exact"}],"termid":"SO:0002259"}


id: PBO:0056417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF11 divergent transcript","termid":"PBO:0056417"}


id: GO:1903336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"negatively_regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of vacuolar transport","synonyms":[{"name":"down regulation of vacuolar transport","type":"exact"},{"name":"down-regulation of vacuolar transport","type":"exact"},{"name":"downregulation of vacuolar transport","type":"exact"},{"name":"inhibition of vacuolar transport","type":"narrow"}],"termid":"GO:1903336"}


id: GO:0060878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis and gives rise to a pouch that will form a semicircular canal.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pouch outgrowth involved in semicircular canal formation","termid":"GO:0060878"}


id: PBO:0086925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate carboxylase isoform; cytoplasmic enzyme that converts pyruvate to oxaloacetate; differentially regulated than isoform Pyc1p; mutations in the human homolog are associated with lactic acidosis; PYC2 has a paralog, PYC1, that arose from the whole genome duplication","termid":"PBO:0086925"}


id: PBO:0043055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin polymerizing factor","termid":"PBO:0043055"}


id: PBO:0074474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 DNA replication regulator and spliceosomal factor","termid":"PBO:0074474"}


id: FYPO:0000525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pexophagy does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal autophagy","termid":"FYPO:0008082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished peroxisome degradation","synonyms":[{"name":"absent pexophagy","type":"exact"},{"name":"peroxisome degradation abolished","type":"exact"},{"name":"pexophagy abolished","type":"exact"},{"name":"pexophagy: absent","type":"related"}],"termid":"FYPO:0000525"}


id: PBO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein (predicted)","termid":"PBO:0002634"}


id: PBO:0078052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 42","termid":"PBO:0078052"}


id: FYPO:0001422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which the observed occurrence of protein processing is decreased.","definition_xrefs":["PomBase:mah","PMID:19520858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein processing during vegetative growth","synonyms":[{"name":"decreased Sre1 cleavage","type":"narrow"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"decreased protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"decreased protein processing during mitotic cell cycle","type":"related"},{"name":"reduced protein processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001422"}


id: GO:1905400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"negatively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905400"}


id: PBO:0069192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 446, pseudogene","termid":"PBO:0069192"}


id: GO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scab formation","termid":"GO:0035314"}


id: GO:0100017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates single organismal cell-cell adhesion.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell-cell adhesion by transcription from RNA polymerase II promoter (obsolete GO:0100017)","termid":"GO:0100017"}


id: MOD:01456
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N-phosphorylated residue","synonyms":[{"name":"NPhosRes","type":"exact"}],"termid":"MOD:01456"}


id: PATO:0000874
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000874 fearful (obsolete PATO:0000874)","termid":"PATO:0000874"}


id: PBO:0110388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPE1 pseudogene 2","termid":"PBO:0110388"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: GO:1904539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000058","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycolytic process","termid":"GO:0045820"},{"relation_name":"is_a","term_name":"regulation of glycolytic process through fructose-6-phosphate","termid":"GO:1904538"},{"relation_name":"negatively_regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006091","GO:0055086"],"is_obsolete":false,"name":"negative regulation of glycolytic process through fructose-6-phosphate","synonyms":[{"name":"down regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"down regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"down-regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"down-regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"downregulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"downregulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"inhibition of glycolysis through fructose-6-phosphate","type":"narrow"},{"name":"inhibition of glycolytic process through fructose-6-phosphate","type":"narrow"},{"name":"negative regulation of glycolysis through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904539"}


id: PBO:0088462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase","termid":"PBO:0088462"}


id: GO:0072557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, IPAF, NAIP and caspase-1, and includes among its functions the sensing of flagellin derived from Legionella pneumophila, Salmonella typhimurium, Pseudomonas aeruginosa and Shigella flexneri.","definition_xrefs":["GOC:vp","PMID:20303873","GOC:add","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IPAF inflammasome complex","termid":"GO:0072557"}


id: PBO:0044369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic FMR1 interacting protein 2","termid":"PBO:0044369"}


id: FYPO:0003273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing nitrite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on nitrite","synonyms":[{"name":"normal cell population growth in presence of nitrite","type":"exact"},{"name":"normal cell population growth on nitrite","type":"exact"},{"name":"normal cell population growth on nitrite ion","type":"exact"},{"name":"normal cellular response to nitrite","type":"related"},{"name":"normal growth on nitrite ions","type":"exact"},{"name":"normal vegetative cell population growth on nitrite","type":"exact"}],"termid":"FYPO:0003273"}


id: PBO:0089609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc1","termid":"PBO:0089609"}


id: FYPO:0000091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to thiabendazole. Cells stop growing (and may die) at a concentration of thiabendazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to thiabendazole","synonyms":[{"name":"hypersensitive to thiabendazole","type":"exact"},{"name":"sensitive to TBZ","type":"exact"},{"name":"sensitive to thiabendazole during mitotic cell cycle","type":"related"},{"name":"sensitive to thiabendazole during vegetative growth","type":"exact"}],"termid":"FYPO:0000091"}


id: FYPO:0007399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during vegetative growth","termid":"FYPO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"normal protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0007399"}


id: GO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 6 metabotropic glutamate receptor binding","synonyms":[{"name":"type 6 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031803"}


id: GO:0120058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"positively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small intestinal transit","synonyms":[{"name":"positive regulation of small bowel transit","type":"exact"},{"name":"positive regulation of small intestine transit","type":"exact"}],"termid":"GO:0120058"}


id: GO:1905836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["GOC:TermGenie","PMID:28078994","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triterpenoid","termid":"GO:1905836"}


id: GO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells within a field of cells that will exhibit a certain pattern of differentiation. Positional information is established through protein signals that emanate from a localized source within a developmental field resulting in specification of a cell type. Those signals are then interpreted in a cell-autonomous manner resulting in the determination of the cell type.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}


id: PBO:0030615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0030615"}


id: GO:0100007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates ceramide biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ceramide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100007)","termid":"GO:0100007"}


id: MOD:00841
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isothiocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiocyanate reagent derivatized residue","termid":"MOD:00841"}


id: FYPO:0004514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype in which a cell has no septum, is elongated, and is viable.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable elongated aseptate vegetative cell (obsolete FYPO:0004514)","synonyms":[{"name":"viable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"viable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"viable long aseptate cell","type":"exact"}],"termid":"FYPO:0004514"}


id: PBO:0067669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 849, pseudogene","termid":"PBO:0067669"}


id: PBO:0029563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_G2/M_transition_DNA_damage_checkpoint_signaling","termid":"PBO:0029563"}


id: GO:0120142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any ecdysone receptor-mediated signaling pathway.","definition_xrefs":["GOC:ha","PMID:23072462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor-mediated signaling pathway","termid":"GO:0120141"},{"relation_name":"positively_regulates","term_name":"ecdysone receptor-mediated signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ecdysone receptor-mediated signaling pathway","termid":"GO:0120142"}


id: PBO:0039223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKR7A2P pseudogene 1","termid":"PBO:0039223"}


id: GO:1902545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["PMID:15518571","GOC:TermGenie","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA N-glycosylase activity (obsolete GO:1902545)","synonyms":[{"name":"down regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down regulation of DNA glycosylase activity","type":"exact"},{"name":"down regulation of endonuclease VIII activity","type":"related"},{"name":"down-regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down-regulation of DNA glycosylase activity","type":"exact"},{"name":"down-regulation of endonuclease VIII activity","type":"related"},{"name":"downregulation of DNA N-glycosylase activity","type":"exact"},{"name":"downregulation of DNA glycosylase activity","type":"exact"},{"name":"downregulation of endonuclease VIII activity","type":"related"},{"name":"inhibition of DNA N-glycosylase activity","type":"narrow"},{"name":"inhibition of DNA glycosylase activity","type":"narrow"},{"name":"inhibition of endonuclease VIII activity","type":"related"},{"name":"negative regulation of DNA glycosylase activity","type":"exact"},{"name":"negative regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902545"}


id: GO:0015061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete red-sensitive opsin (obsolete GO:0015061)","synonyms":[{"name":"red-sensitive opsin","type":"exact"}],"termid":"GO:0015061"}


id: PBO:0040307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting subunit beta","termid":"PBO:0040307"}


id: GO:1902627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:22735702","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"regulation of 66S preribosome assembly","type":"narrow"},{"name":"regulation of 66S preribosome formation","type":"narrow"},{"name":"regulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902627"}


id: PBO:0084542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; ERP6 has a paralog, ERP1, that arose from the whole genome duplication","termid":"PBO:0084542"}


id: PBO:0076321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptoporin","termid":"PBO:0076321"}


id: PBO:0039801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis resistant E3 ubiquitin protein ligase 1","termid":"PBO:0039801"}


id: PBO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Grt1 (predicted)","termid":"PBO:0003028"}


id: GO:0070568
data:
  {"annotated_genes":["SJAG_04233","SJAG_00890","SJAG_01724","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99263,112251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004475"},{"annotations":[104404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[113936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a guanylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_01724":null,"SJAG_03188":null,"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070568","terms_by_termid":{"GO:0004475":null,"GO:0004484":null,"GO:0008193":null}}


id: PBO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 7 pseudogene","termid":"PBO:0062076"}


id: GO:0047347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldose 1-phosphate + NDP = phosphate + NDP-aldose.","definition_xrefs":["MetaCyc:2.7.7.37-RXN","EC:2.7.7.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"aldose-1-phosphate nucleotidyltransferase activity","synonyms":[{"name":"NDP sugar phosphorylase activity","type":"related"},{"name":"NDP-aldose phosphorylase activity","type":"related"},{"name":"NDP-sugar phosphorylase activity","type":"broad"},{"name":"NDP:aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDP:alpha-D-aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDPaldose phosphorylase activity","type":"related"},{"name":"glucose 1-phosphate inosityltransferase activity","type":"related"},{"name":"nucleoside diphosphate sugar:orthophosphate nucleotidyltransferase activity","type":"related"},{"name":"nucleoside diphosphosugar phosphorylase activity","type":"related"},{"name":"sugar nucleotide phosphorylase activity","type":"related"},{"name":"sugar phosphate nucleotidyltransferase activity","type":"related"},{"name":"sugar-1-phosphate nucleotidyltransferase activity","type":"broad"}],"termid":"GO:0047347"}


id: PBO:0038833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 6","termid":"PBO:0038833"}


id: PBO:0067256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 330, pseudogene","termid":"PBO:0067256"}


id: GO:0038095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of immunoglobulin E (IgE) to an Fc-epsilon receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["PMID:15048725","GOC:phg","PMID:12413516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor signaling pathway","termid":"GO:0038093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Fc-epsilon receptor signaling pathway","synonyms":[{"name":"Fc-epsilon receptor signalling pathway","type":"exact"}],"termid":"GO:0038095"}


id: GO:0061579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzing the reaction: acyl-[acyl-carrier-protein] + S-adenosyl-L-methionine -> [acyl-carrier- protein] + S-methyl-5'-thioadenosine + N-acyl-L-homoserine lactone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acyl homoserine lactone synthase activity","secondary_identifiers":["EC:2.3.1.184","RHEA:10096"],"synonyms":[{"name":"autoinducer-1 synthase","type":"related"}],"termid":"GO:0061579"}


id: PBO:0066887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 187","termid":"PBO:0066887"}


id: GO:1990136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9S,10E,12Z)-9-hydroperoxy-10,12-octadecadienoate.","definition_xrefs":["GOC:rph","RHEA:30291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"linoleate 9S-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.58"],"synonyms":[{"name":"9-lipoxygenase activity","type":"related"},{"name":"9S-lipoxygenase activity","type":"related"},{"name":"linoleate 9-lipoxygenase activity","type":"related"},{"name":"linoleate:oxygen 9S-oxidoreductase activity","type":"exact"}],"termid":"GO:1990136"}


id: GO:0021599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the abducens nerve. This process pertains to the initial formation of a structure from unspecified parts. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"abducens nerve morphogenesis","termid":"GO:0021598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve formation","synonyms":[{"name":"CN VI biosynthesis","type":"related"},{"name":"CN VI formation","type":"related"}],"termid":"GO:0021599"}


id: PR:Q9US22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.08c","synonyms":[{"name":"Spom972h-rpl1502","type":"exact"}],"termid":"PR:Q9US22"}


id: PBO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, secretory pathway component Ksh1 (predicted)","termid":"PBO:0003342"}


id: PBO:0061457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin receptor associated death domain, pseudogene","termid":"PBO:0061457"}


id: PBO:0039407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 10 pseudogene 1","termid":"PBO:0039407"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: GO:0006692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prostanoids, any compound based on or derived from the prostanoate structure.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostanoid metabolic process","synonyms":[{"name":"prostanoid metabolism","type":"exact"}],"termid":"GO:0006692"}


id: PBO:0083498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL221C/FSP2","termid":"PBO:0083498"}


id: PBO:0056906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoguardin 1","termid":"PBO:0056906"}


id: PBO:0080636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 83 opposite strand","termid":"PBO:0080636"}


id: FYPO:0002246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of glucose binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased glucose binding","termid":"FYPO:0002246"}


id: PBO:0080712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 16","termid":"PBO:0080712"}


id: GO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1/2)-unsubstituted naphthalenoid-(2/1)-sulfonate + 2 H+ + 2 e- + O2 = 1,2-dihydroxynaphthalene derivative + HSO3(-). Substrates include naphthalene-1,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate), naphthalene-1-sulfonate (forms 1,2-dihydroxynaphthalene), naphthalene-2,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate) and naphthalene-2-sulfonate (forms 1,2-dihydroxynaphthalene).","definition_xrefs":["UM-BBD_enzymeID:e0249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"naphthalene disulfonate 1,2-dioxygenase activity","synonyms":[{"name":"naphthalene disulphonate 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018689"}


id: PBO:0046416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A2","termid":"PBO:0046416"}


id: FYPO:0001095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at a replication origin by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA replication origin binding","synonyms":[{"name":"DNA replication origin binding abolished","type":"exact"},{"name":"abolished origin binding","type":"exact"}],"termid":"FYPO:0001095"}


id: PBO:0040302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase plasma membrane Ca2+ transporting 4","termid":"PBO:0040302"}


id: PBO:0084265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; EMP46 has a paralog, EMP47, that arose from the whole genome duplication","termid":"PBO:0084265"}


id: GO:0015917
data:
  {"annotated_genes":["SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The directed movement of aminophospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"aminophospholipid transport","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0015917","terms_by_termid":{"GO:0140331":null}}


id: GO:1990013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexagonal array of electron dense particles attached to the cytoplasmic face of the presynaptic membrane.","definition_xrefs":["ISBN:0716723808","NIF_Subcellular:sao1730664005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic grid","synonyms":[{"name":"pre-synaptic grid","type":"exact"}],"termid":"GO:1990013"}


id: GO:0102676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: avenasterol + O2 + NADPH + H+ = 5-dehydroavenasterol + 2 H2O + NADP.","definition_xrefs":["EC:1.14.19.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"avenasterol-desaturase activity","secondary_identifiers":["MetaCyc:RXN-4209"],"termid":"GO:0102676"}


id: FYPO:0003070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a single-stranded DNA 5'-3' exodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"}


id: GO:0021591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular system development","termid":"GO:0021591"}


id: PBO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron transport multicopper oxidase Fio1","termid":"PBO:0002425"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


id: PBO:0087481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin modifying histone acetyltransferase complexes; member of the ADA complex, the SAGA complex, and the SLIK complex; transcriptional regulator involved in glucose repression of Gal4p-regulated genes","termid":"PBO:0087481"}


id: GO:0035578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an azurophil granule, a primary lysosomal granule found in neutrophil granulocytes that contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.","definition_xrefs":["PMID:17152095","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"azurophil granule","termid":"GO:0042582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773","GO:0031410"],"is_obsolete":false,"name":"azurophil granule lumen","synonyms":[{"name":"primary granule lumen","type":"exact"}],"termid":"GO:0035578"}


id: PBO:0089223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh2","termid":"PBO:0089223"}


id: PBO:0064939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyglutamine binding protein 1","termid":"PBO:0064939"}


id: GO:0100039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100039)","termid":"GO:0100039"}


id: GO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 14-3-3 protein. A 14-3-3 protein is any of a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimers within all eukaryotic cells, and have been implicated in the modulation of distinct biological processes by binding to specific phosphorylated sites on diverse target proteins, thereby forcing conformational changes or influencing interactions between their targets and other molecules. Each 14-3-3 protein sequence can be roughly divided into three sections: a divergent amino terminus, the conserved core region and a divergent carboxy-terminus. The conserved middle core region of the 14-3-3s encodes an amphipathic groove that forms the main functional domain, a cradle for interacting with client proteins.","definition_xrefs":["PMID:15167810","GOC:cna","PMID:19575580","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"14-3-3 protein binding","termid":"GO:0071889"}


id: FYPO:0005895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during mitotic G1 phase","termid":"FYPO:0005896"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during mitotic G1 phase","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during mitotic G1 phase","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during G1 phase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005895"}


id: PBO:0049043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 34","termid":"PBO:0049043"}


id: PBO:0064603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 1","termid":"PBO:0064603"}


id: PBO:0035807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_hydroxyurea","termid":"PBO:0035807"}


id: GO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of farnesyl diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"farnesyl diphosphate metabolic process","termid":"GO:0045338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"farnesyl diphosphate catabolic process","synonyms":[{"name":"farnesyl diphosphate breakdown","type":"exact"},{"name":"farnesyl diphosphate catabolism","type":"exact"},{"name":"farnesyl diphosphate degradation","type":"exact"}],"termid":"GO:0045339"}


id: GO:0000053
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106653],"is_not":false,"summary":null,"term":"GO:0000053"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving argininosuccinate, 2-(N(omega)-arginino)succinate, an intermediate in the ornithine-urea cycle, where it is synthesized from citrulline and aspartate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"argininosuccinate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"argininosuccinate metabolism","type":"exact"}],"termid":"GO:0000053","terms_by_termid":{"GO:0000053":null}}


id: PBO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 14","termid":"PBO:0070341"}


id: PBO:0082124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid phosphatase; involved in the non-vesicular transport of sterols in both directions between the endoplasmic reticulum and plasma membrane; deletion confers sensitivity to nickel","termid":"PBO:0082124"}


id: PBO:0056433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 6","termid":"PBO:0056433"}


id: PBO:0077677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 8","termid":"PBO:0077677"}


id: GO:0018648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanesulfonate + NADH + H+ + O2 = formaldehyde + NAD+ + sulfite + H2O.","definition_xrefs":["EC:1.14.13.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methanesulfonate monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-9770","RHEA:26077"],"synonyms":[{"name":"MSA monooxygenase activity","type":"related"},{"name":"MSAMO activity","type":"related"},{"name":"mesylate monooxygenase activity","type":"related"},{"name":"methanesulfonate,FMNH2:oxygen oxidoreductase activity","type":"related"},{"name":"methanesulfonate,NADH:oxygen oxidoreductase activity","type":"exact"},{"name":"methanesulfonic acid monooxygenase activity","type":"related"},{"name":"methanesulphonic acid monooxygenase activity","type":"exact"}],"termid":"GO:0018648"}


id: PBO:0066555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 18","termid":"PBO:0066555"}


id: GO:0033101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a cellular bud.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cellular bud","termid":"GO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cellular bud membrane","synonyms":[{"name":"cellular bud plasma membrane","type":"exact"}],"termid":"GO:0033101"}


id: FYPO:0004723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is assembled in an incorrect orientation. Spindle orientation is later corrected so that the spindle is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misoriented mitotic spindle","termid":"FYPO:0007388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000120","FYPO:0002399","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"transiently misoriented mitotic spindle","synonyms":[{"name":"transient abnormal mitotic spindle orientation","type":"exact"},{"name":"transient mitotic spindle misorientation","type":"exact"},{"name":"transiently misoriented mitotic spindle during vegetative growth","type":"exact"},{"name":"transiently misoriented spindle during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004723"}


id: GO:0046381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate metabolic process","synonyms":[{"name":"CMP-N-acetylneuraminate metabolism","type":"exact"}],"termid":"GO:0046381"}


id: GO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as organelles fuse.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid tube assembly","termid":"GO:0060988"},{"relation_name":"part_of","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"lipid tube assembly involved in organelle fusion","synonyms":[{"name":"lipid tubulation involved in organelle fusion","type":"exact"}],"termid":"GO:0060989"}


id: GO:1903002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GOC:sjp","GOC:TermGenie","GO_REF:0000058","PMID:24345162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"},{"relation_name":"is_a","term_name":"regulation of lipid transport across blood-brain barrier","termid":"GO:1903000"},{"relation_name":"positively_regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"activation of lipid transport across blood brain barrier","type":"narrow"},{"name":"positive regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up-regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"upregulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903002"}


id: GO:0110145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a magnetosome.","definition_xrefs":["PMID:27620945","GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"magnetosome","termid":"GO:0110143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome lumen","termid":"GO:0110145"}


id: GO:0050084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + H2O = D-mannitol + 2 H+ + phosphate.","definition_xrefs":["RHEA:19537","EC:3.1.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"mannitol-1-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02167","MetaCyc:MANNITOL-1-PHOSPHATASE-RXN"],"synonyms":[{"name":"D-mannitol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"mannitol-1-phosphate phosphatase activity","type":"related"}],"termid":"GO:0050084"}


id: PBO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 5","termid":"PBO:0061274"}


id: GO:1905212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8760137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"},{"relation_name":"positively_regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast chemotaxis","synonyms":[{"name":"activation of fibroblast chemotaxis","type":"narrow"},{"name":"up regulation of fibroblast chemotaxis","type":"exact"},{"name":"up-regulation of fibroblast chemotaxis","type":"exact"},{"name":"upregulation of fibroblast chemotaxis","type":"exact"}],"termid":"GO:1905212"}


id: PBO:0039659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit beta 1","termid":"PBO:0039659"}


id: PBO:0052855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-12","termid":"PBO:0052855"}


id: PBO:0087826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIE small subunit; involved in RNA polymerase II transcription initiation","termid":"PBO:0087826"}


id: GO:0008277
data:
  {"annotated_genes":["SJAG_02311","SJAG_00266","SJAG_02481","SJAG_01245","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[96605,104148,88271,112548,88934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of GPCR protein signaling pathway","type":"exact"},{"name":"regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0008277","terms_by_termid":{"GO:0106072":null,"GO:0110034":null}}


id: PBO:0016962
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDA2","termid":"PBO:0016962"}


id: PBO:0079373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 8","termid":"PBO:0079373"}


id: PBO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 3","termid":"PBO:0052047"}


id: PBO:0048780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 11","termid":"PBO:0048780"}


id: PBO:0016984
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer2 can form a catalytically active complex with S. cerevisiae Nus1p","termid":"PBO:0016984"}


id: PBO:0069139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 390, pseudogene","termid":"PBO:0069139"}


id: PBO:0080952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBED5 antisense RNA 1","termid":"PBO:0080952"}


id: PBO:0071444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 50","termid":"PBO:0071444"}


id: PBO:0047952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(18)(q21.3)","termid":"PBO:0047952"}


id: PBO:0085163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp2p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; NPP1 has a paralog, NPP2, that arose from the whole genome duplication, and an npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085163"}


id: PBO:0063868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A pseudogene 1","termid":"PBO:0063868"}


id: PBO:0041982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC26 long non-coding RNA","termid":"PBO:0041982"}


id: PR:Q09902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.02c gene.","definition_xrefs":["UniProtKB:Q09902","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 144 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.02c","synonyms":[{"name":"Spom972h-SPAC30D11.02c","type":"exact"}],"termid":"PR:Q09902"}


id: SO:0001138
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i,( i+1),( i+2) if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_turn_motif","termid":"SO:0001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn","secondary_identifiers":["BS:00219"],"synonyms":[{"name":"gamma turn","type":"exact"}],"termid":"SO:0001138"}


id: GO:0010077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of inflorescence meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of inflorescence meristem identity","termid":"GO:0010077"}


id: PBO:0054599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2003","termid":"PBO:0054599"}


id: PBO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_inhibitor_of","termid":"PBO:0000013"}


id: GO:1900526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:8056324","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900526)","synonyms":[{"name":"negative regulation of phosphatidylserine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900526"}


id: PBO:0067386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 491, pseudogene","termid":"PBO:0067386"}


id: PBO:0080771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 3","termid":"PBO:0080771"}


id: FYPO:0003781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitotic interphase","synonyms":[{"name":"normal nuclear envelope morphology during interphase during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"normal nuclear membrane morphology during mitotic interphase","type":"narrow"}],"termid":"FYPO:0003781"}


id: GO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response resulting from recognition of immune complexes via complement or Fc receptors on effector cells leading to activation of neutrophils and other leukocytes and damage to bystander tissue.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type III hypersensitivity","secondary_identifiers":["Wikipedia:Type_III_hypersensitivity"],"termid":"GO:0001802"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87194],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0140101","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5389841","RHEA:24380","GO:0001718","MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN","GO:0070128"],"synonyms":[{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: PBO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 14","termid":"PBO:0045158"}


id: GO:1900896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane metabolic process","termid":"GO:1900899"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heptadecane biosynthetic process","synonyms":[{"name":"regulation of heptadecane anabolism","type":"exact"},{"name":"regulation of heptadecane biosynthesis","type":"exact"},{"name":"regulation of heptadecane formation","type":"exact"},{"name":"regulation of heptadecane synthesis","type":"exact"}],"termid":"GO:1900896"}


id: GO:1905857
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85900],"is_not":false,"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pentose-phosphate shunt.","definition_xrefs":["GOC:TermGenie","PMID:19015259","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentose-phosphate shunt","termid":"GO:0043456"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0055086","GO:0006091"],"is_obsolete":false,"name":"positive regulation of pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905857","terms_by_termid":{"GO:1905857":null}}


id: PBO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain containing 1","termid":"PBO:0045928"}


id: PBO:0053867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1142","termid":"PBO:0053867"}


id: PBO:0085445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of allophanate inducible genes; binds a dodecanucleotide sequence upstream of all genes that are induced by allophanate; contains an UISALL DNA-binding, a transcriptional activation, and a coiled-coil domain","termid":"PBO:0085445"}


id: PBO:0091789
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GCP2","termid":"PBO:0091789"}


id: GO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland alveolus over time, from its formation to its mature state. The mammary gland alveolus is a sac-like structure that is found in the mature gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland lobule development","termid":"GO:0061377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland alveolus development","termid":"GO:0060749"}


id: PBO:0042176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 6","termid":"PBO:0042176"}


id: PBO:0045971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 4","termid":"PBO:0045971"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: PBO:0049539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 3","termid":"PBO:0049539"}


id: GO:1905822
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid separation","termid":"GO:0010965"},{"relation_name":"regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905822","terms_by_termid":{"GO:1905824":null}}


id: GO:1903824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere single strand break repair.","definition_xrefs":["PMID:24374808","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single strand break repair","termid":"GO:1903517"},{"relation_name":"negatively_regulates","term_name":"telomere single strand break repair","termid":"GO:1903823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomere single strand break repair","synonyms":[{"name":"down regulation of single strand break repair in telomere","type":"exact"},{"name":"down regulation of telomere SSBR","type":"related"},{"name":"down regulation of telomere single strand break repair","type":"exact"},{"name":"down regulation of telomere single-strand break repair","type":"exact"},{"name":"down regulation of telomeric single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair in telomere","type":"exact"},{"name":"down-regulation of telomere SSBR","type":"related"},{"name":"down-regulation of telomere single strand break repair","type":"exact"},{"name":"down-regulation of telomere single-strand break repair","type":"exact"},{"name":"down-regulation of telomeric single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair in telomere","type":"exact"},{"name":"downregulation of telomere SSBR","type":"related"},{"name":"downregulation of telomere single strand break repair","type":"exact"},{"name":"downregulation of telomere single-strand break repair","type":"exact"},{"name":"downregulation of telomeric single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair in telomere","type":"narrow"},{"name":"inhibition of telomere SSBR","type":"related"},{"name":"inhibition of telomere single strand break repair","type":"narrow"},{"name":"inhibition of telomere single-strand break repair","type":"narrow"},{"name":"inhibition of telomeric single strand break repair","type":"narrow"},{"name":"negative regulation of single strand break repair in telomere","type":"exact"},{"name":"negative regulation of telomere SSBR","type":"related"},{"name":"negative regulation of telomere single-strand break repair","type":"exact"},{"name":"negative regulation of telomeric single strand break repair","type":"exact"}],"termid":"GO:1903824"}


id: GO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization","termid":"GO:0003254"}


id: PBO:0017626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic septin Spn4","termid":"PBO:0017626"}


id: PBO:0028310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_methylglyoxal","termid":"PBO:0028310"}


id: PBO:0053098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 4A","termid":"PBO:0053098"}


id: FYPO:0008091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated rRNA measured in a cell is higher than normal.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}


id: FYPO:0006842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosomes containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a normal (i.e. indistinguishable from wild type) portion of the centromeric region of the chromosome. CENP-A-containing nucleosomes are assembled into chromatin around centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0000729","PMID:28904333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal spatial extent of CENP-A containing nucleosome assembly","synonyms":[{"name":"normal extent of CENP-A containing nucleosome","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"normal spatial extent of CENP-A deposition","type":"related"},{"name":"normal spatial extent of CENP-A loading","type":"related"},{"name":"normal spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"normal spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"normal spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"normal spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0006842"}


id: GO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyanthranilate + O2 = cis,cis-2-amino-3-(3-oxoprop-1-enyl)but-2-enedioate + H+.","definition_xrefs":["EC:1.13.11.6","RHEA:17953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyanthranilate 3,4-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-71218","KEGG_REACTION:R02665","MetaCyc:1.13.11.6-RXN","UM-BBD_reactionID:r1027"],"synonyms":[{"name":"3-hydroxyanthranilate oxygenase activity","type":"related"},{"name":"3-hydroxyanthranilate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"3-hydroxyanthranilic acid dioxygenase activity","type":"related"},{"name":"3-hydroxyanthranilic acid oxygenase activity","type":"related"},{"name":"3-hydroxyanthranilic oxygenase activity","type":"related"},{"name":"3HAO","type":"related"}],"termid":"GO:0000334"}


id: PBO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIC domain protein adenylyltransferase","termid":"PBO:0047618"}


id: PBO:0054194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1569","termid":"PBO:0054194"}


id: FYPO:0003602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is abolished.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"abolished mRNA splicing, via spliceosome","synonyms":[{"name":"abolished mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abolished mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abolished nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"abolished splicing","type":"broad"},{"name":"mRNA splicing via spliceosome abolished","type":"exact"}],"termid":"FYPO:0003602"}


id: PBO:0050864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ID2 antisense RNA 1","termid":"PBO:0050864"}


id: PBO:0081060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 18","termid":"PBO:0081060"}


id: PBO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1 pseudogene 1","termid":"PBO:0050771"}


id: GO:0021767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary body over time from its initial formation until its mature state. The mammillary body is a protrusion at the posterior end of the hypothalamus that contains hypothalamic nuclei.","definition_xrefs":["GOC:jid","GOC:cls","ISBN:0878937420","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary body development","termid":"GO:0021767"}


id: PBO:0050225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 3","termid":"PBO:0050225"}


id: GO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA transposition, the process of transposing (moving to a different location) a segment of a chromosome or a piece of a DNA molecule.","definition_xrefs":["GOC:dph","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transposition, DNA-mediated (obsolete GO:0000337)","synonyms":[{"name":"regulation of DNA transposition","type":"exact"}],"termid":"GO:0000337"}


id: GO:0051771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase biosynthetic process","termid":"GO:0051769"},{"relation_name":"negatively_regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051774"],"synonyms":[{"name":"down regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"down-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"downregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"downregulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"inhibition of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"inhibition of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of NO synthase biosynthesis","type":"exact"},{"name":"negative regulation of NO synthase biosynthetic process","type":"exact"},{"name":"negative regulation of NOS biosynthesis","type":"exact"},{"name":"negative regulation of NOS biosynthetic process","type":"exact"},{"name":"negative regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"negative regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051771"}


id: PBO:0080267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 30 pseudogene","termid":"PBO:0080267"}


id: PBO:0086606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; functions together with HAM1 to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA, without affecting uptake or incorporation of uracil into RNA; proposed to be involved in the metabolism of purine and pyrimidine base analogues; deletion mutants are sensitive to HAP and AHA","termid":"PBO:0086606"}


id: PATO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001077 absolute pressure (obsolete PATO:0001077)","termid":"PATO:0001077"}


id: PBO:0061066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein","termid":"PBO:0061066"}


id: PATO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001050 relative susceptibility (obsolete PATO:0001050)","termid":"PATO:0001050"}


id: GO:0006868
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62789],"is_not":false,"summary":null,"term":"GO:0006868"}]},"cv_name":"biological_process","definition":"The directed movement of glutamine, 2-amino-4-carbamoylbutanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glutamine transport","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["GO:0015815"],"synonyms":[{"name":"L-glutamine transport","type":"narrow"}],"termid":"GO:0006868","terms_by_termid":{"GO:0006868":null}}


id: PBO:0062638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 7 pseudogene","termid":"PBO:0062638"}


id: PBO:0070813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 43","termid":"PBO:0070813"}


id: PATO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's lacking odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorless","termid":"PATO:0001208"}


id: PBO:0080624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR70 pseudogene 1","termid":"PBO:0080624"}


id: PBO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1 (predicted)","termid":"PBO:0017964"}


id: GO:0072030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a short nephron over time, from its formation to the mature structure. Short nephrons are associated with mid-cortical and superficial glomeruli, are situated entirely in the outer medulla, and have no thin ascending limb.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short nephron development","termid":"GO:0072030"}


id: FYPO:0006542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during mitosis is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during mitosis","synonyms":[{"name":"increased RNA accumulation during mitosis","type":"related"},{"name":"increased RNA level during M phase of mitotic cell cycle","type":"related"},{"name":"increased RNA level during mitosis during vegetative growth","type":"exact"},{"name":"increased RNA level during mitotic M phase","type":"related"},{"name":"increased mRNA level during mitosis","type":"narrow"},{"name":"increased transcript level during mitosis","type":"exact"}],"termid":"FYPO:0006542"}


id: PBO:0039762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APRG1 tumor suppressor candidate","termid":"PBO:0039762"}


id: PBO:0043937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRTC1 pseudogene 1","termid":"PBO:0043937"}


id: PBO:0025440
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcytidine at positions 1297 & 1815","termid":"PBO:0025440"}


id: _global:has_functional_parent
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"'Entity A' has_functional_parent 'Entity B' implies that 'Entity B' has at least one chacteristic group from which 'Entity A' can be derived by functional modification.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_functional_parent","termid":"_global:has_functional_parent"}


id: PBO:0079043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-5","termid":"PBO:0079043"}


id: PBO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation","termid":"PBO:0030973"}


id: GO:0070093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucagon secretion","termid":"GO:0070092"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glucagon secretion","synonyms":[{"name":"down regulation of glucagon secretion","type":"exact"},{"name":"down-regulation of glucagon secretion","type":"exact"},{"name":"downregulation of glucagon secretion","type":"exact"},{"name":"inhibition of glucagon secretion","type":"narrow"}],"termid":"GO:0070093"}


id: PBO:0027416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_during_glucose_starvation","termid":"PBO:0027416"}


id: GO:0090726
data:
  {"annotated_genes":["SJAG_03453","SJAG_03915","SJAG_02233","SJAG_00514","SJAG_03011","SJAG_04509","SJAG_02379","SJAG_01794","SJAG_01925","SJAG_04765","SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84115,86063,87034,87466,89656,91594,103304,103358,107537,110326,112337],"is_not":false,"summary":null,"term":"GO:0090726"}]},"cv_name":"cellular_component","definition":"A region of the cell cortex that contains a higher concentration of growth polarity factors than the surrounding cortex and that changes position over time. An example is found in fission yeast cells during early mating, in which the GTPase Cdc42 dynamically to discrete zones within the cortex prior to shmoo formation.","definition_xrefs":["GOC:mah","PMID:23200991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01925":null,"SJAG_02233":null,"SJAG_02379":null,"SJAG_02602":null,"SJAG_03011":null,"SJAG_03453":null,"SJAG_03915":null,"SJAG_04509":null,"SJAG_04765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cortical dynamic polarity patch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dynamic polarity patch at the cell cortex","type":"exact"}],"termid":"GO:0090726","terms_by_termid":{"GO:0090726":null}}


id: PBO:0029873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4_acetylation","termid":"PBO:0029873"}


id: PBO:0067914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 216","termid":"PBO:0067914"}


id: GO:0030757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,7-tetrahydroxy-3-methoxyflavone + S-adenosyl-L-methionine(1+) = 3',4',5-trihydroxy-3,7-dimethoxyflavone + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:16181","EC:2.1.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-methylquercitin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.82-RXN","KEGG_REACTION:R05323"],"synonyms":[{"name":"3-methylquercetin 7-O-methyltransferase activity","type":"related"},{"name":"7-OMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5,7-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5,7,3',4'-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-methyltransferase activity","type":"related"}],"termid":"GO:0030757"}


id: PBO:0079066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 2-1","termid":"PBO:0079066"}


id: MOD:00396
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on an oxygen with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-glycosylated residue","synonyms":[{"name":"OGlycoRes","type":"exact"}],"termid":"MOD:00396"}


id: PBO:0111807
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRI subfamily","termid":"PBO:0111807"}


id: PATO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and orange hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow orange","termid":"PATO:0001944"}


id: GO:0097272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of an internal steady state of ammonium.","definition_xrefs":["GOC:yaf","PMID:12695560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"ammonium homeostasis","synonyms":[{"name":"ammonia homeostasis","type":"exact"}],"termid":"GO:0097272"}


id: PBO:0053757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 999","termid":"PBO:0053757"}


id: GO:0018587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-monooxygenase activity (obsolete GO:0018587)","synonyms":[{"name":"limonene 8-monooxygenase activity","type":"exact"}],"termid":"GO:0018587"}


id: PBO:0072924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 5","termid":"PBO:0072924"}


id: PBO:0080458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSTM2B divergent transcript","termid":"PBO:0080458"}


id: PBO:0042725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C","termid":"PBO:0042725"}


id: PATO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's lacking orientation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disoriented","termid":"PATO:0000613"}


id: GO:0035636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information between living organisms.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism signaling (obsolete GO:0035636)","synonyms":[{"name":"multi-organism signalling","type":"exact"},{"name":"pheromone signaling","type":"narrow"},{"name":"signaling between organisms","type":"exact"},{"name":"signaling with other organism","type":"exact"}],"termid":"GO:0035636"}


id: PBO:0066303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 5","termid":"PBO:0066303"}


id: PBO:0054337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1730","termid":"PBO:0054337"}


id: PBO:0000862
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.43","termid":"PBO:0000862"}


id: PBO:0088752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex intermodule linker subunit Clr1","termid":"PBO:0088752"}


id: PBO:0070532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 31","termid":"PBO:0070532"}


id: PBO:0086371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; similar to Phanerochaete chrysosporium aryl alcohol dehydrogenase; ORFs AAD6/YFL056C and AAD16/YFL057C are displaced from one another by -1 frameshift; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086371"}


id: PBO:0073934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC17A6 divergent transcript","termid":"PBO:0073934"}


id: PBO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVB","termid":"PBO:0060347"}


id: GO:1900545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900545)","synonyms":[{"name":"regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900545"}


id: PBO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BB member 1 pseudogene","termid":"PBO:0062238"}


id: PR:Q9US04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyltranspeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.09","secondary_identifiers":["UniProtKB:Q9US04"],"synonyms":[{"name":"Spom972h-GGT1","type":"exact"},{"name":"gamma-glutamyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US04"}


id: GO:1903405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nuclear body.","definition_xrefs":["PMID:24713849","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleoplasm","termid":"GO:1990173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to nuclear body","synonyms":[{"name":"protein localisation in nuclear body","type":"exact"},{"name":"protein localisation to nuclear body","type":"exact"},{"name":"protein localization in nuclear body","type":"exact"}],"termid":"GO:1903405"}


id: GO:0034879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3,6-trihydroxyisonicotinate = 2,3,6-trihydroxypyridine + CO2.","definition_xrefs":["UM-BBD_reactionID:r1340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3,6-trihydroxyisonicotinate decarboxylase activity","termid":"GO:0034879"}


id: PBO:0091288
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific splicing","termid":"PBO:0091288"}


id: GO:0051384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["PMID:9884123","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosteroid","termid":"GO:0031960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glucocorticoid","synonyms":[{"name":"response to glucocorticoid stimulus","type":"exact"}],"termid":"GO:0051384"}


id: GO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome involved in the process of mitosis.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic chromosome (obsolete GO:0005708)","synonyms":[{"name":"mitotic chromosome","type":"exact"}],"termid":"GO:0005708"}


id: PBO:0034204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_heterochronous_homology_relationship_with","termid":"PBO:0034204"}


id: FYPO:0008107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus","termid":"FYPO:0004455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during stationary phase","termid":"FYPO:0008107"}


id: FYPO:0004898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate decarboxylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal pyruvate decarboxylase activity","termid":"FYPO:0004898"}


id: GO:0035529
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101282],"is_not":false,"summary":null,"term":"GO:0035529"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H2O = AMP + NMNH + 2 H+.","definition_xrefs":["RHEA:48868","PMID:20181750","PMID:12399474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"NADH pyrophosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6809287","MetaCyc:RXN0-4401","KEGG_REACTION:R00103","EC:3.6.1.22"],"synonyms":[{"name":"NADH diphosphatase activity","type":"exact"},{"name":"NADH pyrophosphohydrolase activity","type":"exact"}],"termid":"GO:0035529","terms_by_termid":{"GO:0035529":null}}


id: FYPO:0001123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore shape","termid":"FYPO:0002467"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"elongated spore","synonyms":[{"name":"long spores","type":"exact"}],"termid":"FYPO:0001123"}


id: PBO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 8","termid":"PBO:0042911"}


id: GO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress (obsolete GO:0061403)","termid":"GO:0061403"}


id: GO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"},{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}


id: PATO:0000683
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000683 relative temporal value (obsolete PATO:0000683)","termid":"PATO:0000683"}


id: PBO:0053477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 448","termid":"PBO:0053477"}


id: GO:0033442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"AAC codon-amino acid adaptor activity","synonyms":[{"name":"asparagine tRNA","type":"related"}],"termid":"GO:0033442"}


id: FYPO:0003093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which small RNA molecules physically associated with the Argonaute protein (Ago1) are longer than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"increased Argonaute-associated RNA length","synonyms":[{"name":"increased Argonaute-associated priRNA length","type":"narrow"},{"name":"increased Argonaute-associated siRNA length","type":"narrow"},{"name":"increased length of Ago1-associated RNA","type":"narrow"},{"name":"increased length of Argonaute-associated RNA","type":"exact"},{"name":"increased length of Argonaute-associated small RNA","type":"exact"}],"termid":"FYPO:0003093"}


id: GO:1903312
data:
  {"annotated_genes":["SJAG_03448","SJAG_04825","SJAG_03696","SJAG_03883","SJAG_02573","SJAG_00797","SJAG_03283","SJAG_04946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96253,114431,77586,86402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[92426,85692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[85296,85693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"negatively_regulates","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA metabolic process","type":"exact"},{"name":"down regulation of mRNA metabolism","type":"exact"},{"name":"down-regulation of mRNA metabolic process","type":"exact"},{"name":"down-regulation of mRNA metabolism","type":"exact"},{"name":"downregulation of mRNA metabolic process","type":"exact"},{"name":"downregulation of mRNA metabolism","type":"exact"},{"name":"inhibition of mRNA metabolic process","type":"narrow"},{"name":"inhibition of mRNA metabolism","type":"narrow"},{"name":"negative regulation of mRNA metabolism","type":"exact"}],"termid":"GO:1903312","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0120271":null,"GO:1902373":null}}


id: PBO:0058375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4747","termid":"PBO:0058375"}


id: GO:0005347
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[99029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATP transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9717392","GO:0005348"],"termid":"GO:0005347","terms_by_termid":{"GO:0005471":null,"GO:0140987":null}}


id: GO:0016459
data:
  {"annotated_genes":["SJAG_04901","SJAG_00938","SJAG_03011","SJAG_00228","SJAG_04001","SJAG_01665","SJAG_02431","SJAG_04781","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104311,112342],"is_not":false,"summary":null,"term":"GO:0016459"},{"annotations":[91547,93046,99426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045160"},{"annotations":[78781,97427,114006,96863,93825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016460"}]},"cv_name":"cellular_component","definition":"A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes.","definition_xrefs":["GOC:mah","Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00938":null,"SJAG_01665":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016459","terms_by_termid":{"GO:0016459":null,"GO:0016460":null,"GO:0045160":null}}


id: SO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primer with one or more mismatches to the DNA template corresponding to a position within a restriction enzyme recognition site.","direct_ancestors":[{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dCAPS_primer","synonyms":[{"name":"dCAPS primer","type":"exact"},{"name":"derived cleaved amplified polymorphic primer","type":"exact"}],"termid":"SO:0001699"}


id: PBO:0079422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 5","termid":"PBO:0079422"}


id: GO:0020035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adherence of symbiont-infected erythrocytes to microvascular endothelium via symbiont proteins embedded in the membrane of the erythrocyte.","definition_xrefs":["PMID:10362584","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to microvasculature","secondary_identifiers":["GO:0043706"],"synonyms":[{"name":"cytoadherence to microvasculature, mediated by parasite protein","type":"narrow"},{"name":"cytoadherence to microvasculature, mediated by symbiont protein","type":"exact"},{"name":"heterophilic cell adhesion involved in cytoadherence to microvasculature, mediated by parasite protein","type":"narrow"},{"name":"parasite-protein-mediated cytoadherence to microvasculature","type":"narrow"},{"name":"symbiont-protein-mediated cytoadherence to microvasculature","type":"broad"}],"termid":"GO:0020035"}


id: GO:0008859
data:
  {"annotated_genes":["SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110602],"is_not":false,"summary":null,"term":"GO:0008859"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction.","definition_xrefs":["ISBN:0198547684","EC:3.1.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0004527","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"exoribonuclease II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.13.1-RXN"],"synonyms":[{"name":"5'-exoribonuclease activity","type":"related"},{"name":"BN ribonuclease activity","type":"related"},{"name":"Escherichia coli exo-RNase II","type":"related"},{"name":"RNase II","type":"related"},{"name":"RNase II activity","type":"exact"},{"name":"ribonuclease II activity","type":"related"},{"name":"ribonuclease Q","type":"related"}],"termid":"GO:0008859","terms_by_termid":{"GO:0008859":null}}


id: PBO:0050247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 25","termid":"PBO:0050247"}


id: FYPO:0006978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular coenzyme Q10 level","synonyms":[{"name":"decreased cellular UQ10 level","type":"exact"},{"name":"decreased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"decreased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"decreased cellular ubiquinone 10 level","type":"exact"},{"name":"reduced cellular coenzyme Q10 level","type":"exact"}],"termid":"FYPO:0006978"}


id: PBO:0086397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytosolic protein of unknown function","termid":"PBO:0086397"}


id: PATO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001150 absolute susceptibility value (obsolete PATO:0001150)","termid":"PATO:0001150"}


id: MOD:01952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue and an L-glutamine residue with an ester bond releasing ammonia to form O-(L-isoglutamyl)-L-threonine.","definition_xrefs":["PubMed:17051152","RESID:AA0536#TQX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-threonine","termid":"MOD:01979"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-threonine (Gln-Thr)","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01952"}


id: PBO:0063008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 2","termid":"PBO:0063008"}


id: PBO:0056494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 2","termid":"PBO:0056494"}


id: PBO:0016118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific polypeptide Pc","termid":"PBO:0016118"}


id: PBO:0068949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 193, pseudogene","termid":"PBO:0068949"}


id: GO:0004835
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84473],"is_not":false,"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.","definition_xrefs":["EC:6.3.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"tubulin-tyrosine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:17605","MetaCyc:6.3.2.25-RXN","Reactome:R-HSA-8955706"],"synonyms":[{"name":"TTL activity","type":"related"},{"name":"alpha-tubulin:L-tyrosine ligase (ADP-forming)","type":"related"},{"name":"tubulinyl-tyrosine ligase activity","type":"exact"}],"termid":"GO:0004835","terms_by_termid":{"GO:0004835":null}}


id: PBO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 115","termid":"PBO:0071113"}


id: PBO:0003753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Byr2","termid":"PBO:0003753"}


id: PBO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 4","termid":"PBO:0043804"}


id: PBO:0061345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 3","termid":"PBO:0061345"}


id: GO:1905640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetaldehyde stimulus.","definition_xrefs":["PMID:27687866","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetaldehyde","termid":"GO:1905640"}


id: PBO:0027262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_single_large_spore","termid":"PBO:0027262"}


id: GO:0035767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:BHF","CL:0000115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis","termid":"GO:0035767"}


id: PBO:0072982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretagogin, EF-hand calcium binding protein","termid":"PBO:0072982"}


id: PBO:0002940
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.76","termid":"PBO:0002940"}


id: GO:1901562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paraquat stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paraquat","termid":"GO:1901562"}


id: PBO:0084183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase and subunit of Set3 and Rpd3L complexes; required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; co-localizes with Cmr1p in nuclear foci in response to DNA damage by MMS","termid":"PBO:0084183"}


id: FYPO:0002269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutamate-ammonia ligase activity","termid":"FYPO:0002267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased glutamate-ammonia ligase activity","synonyms":[{"name":"decreased GS activity","type":"exact"},{"name":"decreased glutamine synthetase activity","type":"exact"},{"name":"decreased glutamylhydroxamic synthetase activity","type":"exact"},{"name":"reduced glutamate-ammonia ligase activity","type":"exact"}],"termid":"FYPO:0002269"}


id: GO:0071547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL4-TDRD9 module, a set of proteins that act in the secondary piRNA pathway.","definition_xrefs":["PMID:20011505","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"piP-body","termid":"GO:0071547"}


id: PBO:0072036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 6","termid":"PBO:0072036"}


id: PBO:0073574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 2","termid":"PBO:0073574"}


id: PBO:0075585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 9","termid":"PBO:0075585"}


id: PBO:0075067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-30","termid":"PBO:0075067"}


id: PBO:0054861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2275","termid":"PBO:0054861"}


id: PBO:0065753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase B","termid":"PBO:0065753"}


id: GO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms of different species monitors population density by detecting the concentration of small diffusible signal molecules.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interspecies quorum sensing (obsolete GO:0052097)","termid":"GO:0052097"}


id: GO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of S phase of mitotic cell cycle activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of S phase of mitotic cell cycle (obsolete GO:0045750)","synonyms":[{"name":"activation of S phase of mitotic cell cycle","type":"narrow"},{"name":"positive regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"positive regulation of S-phase of mitotic cell cycle","type":"exact"},{"name":"stimulation of S phase of mitotic cell cycle","type":"narrow"},{"name":"up regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"up-regulation of S phase of mitotic cell cycle","type":"exact"},{"name":"upregulation of S phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0045750"}


id: GO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XII) chains; type XII collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"},{"relation_name":"is_a","term_name":"anchoring collagen complex","termid":"GO:0030934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XII trimer","termid":"GO:0005595"}


id: PBO:0073507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 2A","termid":"PBO:0073507"}


id: PBO:0029659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029659"}


id: GO:0060667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differential growth of the salivary branches along their axis, resulting in the growth of a branch.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branch elongation involved in salivary gland morphogenesis","termid":"GO:0060667"}


id: PBO:0059504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded membrane attachment site","termid":"PBO:0059504"}


id: GO:0045498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sex comb over time, from its formation to the mature structure. The sex combs are the male specific chaetae located on the prothoracic tarsal segment of the prothoracic leg.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex comb development","termid":"GO:0045498"}


id: MOD:01118
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-N-6-phosphogluconoylation (His Tagged proteins)","termid":"MOD:01118"}


id: PBO:0056002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 1","termid":"PBO:0056002"}


id: PR:Q9C0Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps602 gene.","definition_xrefs":["UniProtKB:Q9C0Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.12","synonyms":[{"name":"Spom972h-rps602","type":"exact"}],"termid":"PR:Q9C0Z7"}


id: GO:0015398
data:
  {"annotated_genes":["SJAG_04136"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115118],"is_not":false,"summary":null,"term":"GO:0015398"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ammonium from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium transmembrane transporter activity","termid":"GO:0008519"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04136":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity secondary active ammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity secondary active ammonium transmembrane transporter activity","type":"exact"}],"termid":"GO:0015398","terms_by_termid":{"GO:0015398":null}}


id: GO:0030781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 6-O-methylnorlaudanosoline = S-adenosyl-L-homocysteine + nororientaline.","definition_xrefs":["EC:2.1.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"6-O-methylnorlaudanosoline 5'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.121-RXN","RHEA:11892"],"synonyms":[{"name":"S-adenosyl-L-methionine:6-O-methylnorlaudanosoline 5'-O-methyltransferase activity","type":"related"}],"termid":"GO:0030781"}


id: PBO:0088064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0088064"}


id: GO:0046278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving protocatechuate, the anion of protocatechuic acid (3,4-dihydroxybenzoic acid).","definition_xrefs":["GOC:ai","PMID:24359411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3,4-dihydroxybenzoate metabolic process","synonyms":[{"name":"protocatechuate metabolic process","type":"exact"},{"name":"protocatechuate metabolism","type":"exact"}],"termid":"GO:0046278"}


id: GO:0090037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase C signaling","termid":"GO:0090036"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of protein kinase C signaling","synonyms":[{"name":"positive regulation of protein kinase C signaling cascade","type":"related"},{"name":"positive regulation of protein kinase C signalling cascade","type":"exact"}],"termid":"GO:0090037"}


id: PBO:0061794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontogenic, ameloblast associated","termid":"PBO:0061794"}


id: GO:0052699
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99802,107715,107716],"is_not":false,"summary":null,"term":"GO:0052699"},{"annotations":[61255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"ergothioneine metabolic process","termid":"GO:0052698"},{"relation_name":"is_a","term_name":"cellular modified histidine biosynthetic process","termid":"GO:0052703"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"ergothioneine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate biosynthetic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine anabolism","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine biosynthesis","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine biosynthetic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine formation","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine synthesis","type":"exact"},{"name":"ergothioneine anabolism","type":"exact"},{"name":"ergothioneine biosynthesis","type":"exact"},{"name":"ergothioneine formation","type":"exact"},{"name":"ergothioneine synthesis","type":"exact"}],"termid":"GO:0052699","terms_by_termid":{"GO:0052699":null,"GO:0140479":null}}


id: PBO:0089820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)tt","termid":"PBO:0089820"}


id: PBO:0036045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036045"}


id: PBO:0080054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 25","termid":"PBO:0080054"}


id: PBO:0089768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase alpha subunit Gta1","termid":"PBO:0089768"}


id: PBO:0070490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 25","termid":"PBO:0070490"}


id: PR:O13709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.01c","synonyms":[{"name":"Spom972h-SPAC14C4.01c","type":"exact"}],"termid":"PR:O13709"}


id: GO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression).","definition_xrefs":["ISBN:0878932437","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in gastrulation","termid":"GO:0042074"}


id: MOD:01842
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to S-(2-aminovinyl)-L-cysteine.","definition_xrefs":["RESID:AA0548","PubMed:20805503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(R,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-L-cysteine","type":"exact"}],"termid":"MOD:01842"}


id: GO:0016210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.","definition_xrefs":["EC:2.3.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"naringenin-chalcone synthase activity","secondary_identifiers":["MetaCyc:NARINGENIN-CHALCONE-SYNTHASE-RXN","RHEA:11128"],"synonyms":[{"name":"DOCS","type":"narrow"},{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"}],"termid":"GO:0016210"}


id: GO:0000747
data:
  {"annotated_genes":["SJAG_03646","SJAG_01943","SJAG_04398","SJAG_02878","SJAG_00870","SJAG_02351","SJAG_03501","SJAG_00113","SJAG_02864","SJAG_02444","SJAG_02592","SJAG_04206","SJAG_00256","SJAG_04813","SJAG_02472","SJAG_02486","SJAG_03309","SJAG_00514","SJAG_01171","SJAG_01370","SJAG_02426","SJAG_00526","SJAG_00210","SJAG_02602","SJAG_01993","SJAG_03735","SJAG_05153","SJAG_00990","SJAG_03048","SJAG_03346","SJAG_02380","SJAG_02989","SJAG_02222","SJAG_03623","SJAG_00975","SJAG_04026","SJAG_02921","SJAG_02432","SJAG_01401","SJAG_02266","SJAG_04723","SJAG_04394","SJAG_01919","SJAG_00993","SJAG_01113","SJAG_04009","SJAG_02718","SJAG_02730","SJAG_01254","SJAG_03444","SJAG_05016","SJAG_01613","SJAG_02233","SJAG_06638","SJAG_02924","SJAG_01509","SJAG_03067","SJAG_01794","SJAG_02923","SJAG_04936","SJAG_04312","SJAG_01345","SJAG_05000","SJAG_02379","SJAG_01894","SJAG_03974","SJAG_03209","SJAG_03802","SJAG_01311","SJAG_03486","SJAG_02286","SJAG_04682","SJAG_00117","SJAG_02700","SJAG_04887","SJAG_02773","SJAG_03453","SJAG_00664","SJAG_00472","SJAG_02045","SJAG_00140","SJAG_04982","SJAG_01017","SJAG_04155","SJAG_01978","SJAG_00781","SJAG_02066","SJAG_02651","SJAG_05001","SJAG_03081","SJAG_00667","SJAG_00600","SJAG_03340","SJAG_02785","SJAG_01754","SJAG_00810","SJAG_02737","SJAG_01718","SJAG_01084","SJAG_00145","SJAG_01888","SJAG_01699","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84433,87041,88367,93811,94466,97235,101035,102270,103031,103361,108607,110493,110789,114161],"is_not":false,"summary":null,"term":"GO:0000747"},{"annotations":[93901,88694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000755"},{"annotations":[90208,84512,104250,98116,85308,98115,107495,96307],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904541"},{"annotations":[94600],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031141"},{"annotations":[111739],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031142"},{"annotations":[115194,102443,112646,111740,95663,112308,103224,114344,104987,85426,115195,84260],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010514"},{"annotations":[107642,83995,87569,113100,87190,95386,84754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000742"},{"annotations":[110494,94467,84489,88695,95067,95146],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[101076,112727,89387,98536,85027,84434,97790,88272,92567],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031138"},{"annotations":[91336],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140538"},{"annotations":[87592,96700,101976,105199,110640,111686,112236,100667,89103,102662,98015,102822,84435,90406,90547,102070,103018],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[89499],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[95400,87570,91388,93755,83997],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000743"},{"annotations":[84076,89357],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0071432"},{"annotations":[89500,88368,92557,85446,93226,102444],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[103311,84374],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0000750"},{"annotations":[88537,91470,92547,97363,106381],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"},{"annotations":[103312,96284,95610,101078,107551,97926,87044,112439,94734,84375],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031139"},{"annotations":[97551,115198,100609,96657,104988,95664,99540,115199,84089,104758,103226,112440],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[87049,86077,89663,102545],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031137"},{"annotations":[101693],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0000749"},{"annotations":[107544,87050,111742,102546],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"A conjugation process that results in the union of cellular and genetic information from compatible mating types. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":103,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00117":null,"SJAG_00140":null,"SJAG_00145":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00667":null,"SJAG_00781":null,"SJAG_00810":null,"SJAG_00870":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01171":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01370":null,"SJAG_01401":null,"SJAG_01509":null,"SJAG_01613":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01894":null,"SJAG_01919":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02045":null,"SJAG_02066":null,"SJAG_02222":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02286":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02426":null,"SJAG_02432":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02602":null,"SJAG_02651":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02737":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02864":null,"SJAG_02878":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03209":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03646":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_03974":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04155":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04398":null,"SJAG_04682":null,"SJAG_04723":null,"SJAG_04813":null,"SJAG_04887":null,"SJAG_04936":null,"SJAG_04982":null,"SJAG_05000":null,"SJAG_05001":null,"SJAG_05016":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030477","Wikipedia:Conjugation","GO:0007333","GO:0030461","GO:0007322"],"synonyms":[{"name":"cell fusion","type":"related"},{"name":"mating","type":"related"}],"termid":"GO:0000747","terms_by_termid":{"GO:0000742":null,"GO:0000743":null,"GO:0000747":null,"GO:0000749":null,"GO:0000750":null,"GO:0000755":null,"GO:0010514":null,"GO:0010515":null,"GO:0031137":null,"GO:0031138":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0032220":null,"GO:0071432":null,"GO:0071507":null,"GO:0090029":null,"GO:0140538":null,"GO:1900237":null,"GO:1904541":null,"GO:1904600":null}}


id: PBO:0077030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase like 1","termid":"PBO:0077030"}


id: GO:0070973
data:
  {"annotated_genes":["SJAG_00284","SJAG_03244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91701,96998],"is_not":false,"summary":null,"term":"GO:0070973"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at an endoplasmic reticulum exit site.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_03244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum exit site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to endoplasmic reticulum exit site","type":"exact"},{"name":"protein localization to ER exit site","type":"exact"}],"termid":"GO:0070973","terms_by_termid":{"GO:0070973":null}}


id: GO:1990458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipooligosaccharide. Lipooligosaccharides (LOSs) are the major glycolipids expressed on mucosal Gram-negative bacteria.","definition_xrefs":["PMID:8894399","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipooligosaccharide binding","synonyms":[{"name":"LOS binding","type":"related"},{"name":"endotoxin binding","type":"related"}],"termid":"GO:1990458"}


id: PBO:0058827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8057","termid":"PBO:0058827"}


id: PBO:0078121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-3","termid":"PBO:0078121"}


id: PBO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor Rdi1","termid":"PBO:0090107"}


id: PBO:0088054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant","termid":"PBO:0088054"}


id: GO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow.","definition_xrefs":["ISBN:0781735149","GOC:add","ISBN:0198547684","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"membrane attack complex","secondary_identifiers":["Wikipedia:Complement_membrane_attack_complex"],"synonyms":[{"name":"MAC","type":"exact"},{"name":"TCC","type":"exact"},{"name":"membrane attack complex protein alphaM chain","type":"narrow"},{"name":"membrane attack complex protein beta2 chain","type":"narrow"},{"name":"terminal complement complex","type":"exact"}],"termid":"GO:0005579"}


id: PBO:0006169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exists_during","termid":"PBO:0006169"}


id: PBO:0091543
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-Amylase Homolog","termid":"PBO:0091543"}


id: GO:1905426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:bf","PMID:17244647","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905426)","synonyms":[{"name":"activation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wg signalling 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id: PBO:0062010
data:
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id: PBO:0049260
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id: PBO:0052542
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 15","termid":"PBO:0052542"}


id: PBO:0063521
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id: GO:0009589
data:
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id: FYPO:0002242
data:
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id: PBO:0046623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 4","termid":"PBO:0046623"}


id: PBO:0044677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible 1 homolog 1","termid":"PBO:0044677"}


id: PBO:0073036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 1","termid":"PBO:0073036"}


id: GO:0009176
data:
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id: PBO:0091975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 3'UTR of ptc2","termid":"PBO:0091975"}


id: PBO:0030084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_tip","termid":"PBO:0030084"}


id: FYPO:0006260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin knobs in subtelomeric regions does not occur. Chromatin knobs are highly condensed chromatin bodies formed from subtelomeric heterochromatin (observed on chromosomes 1 and 2).","definition_xrefs":["PMID:26804021","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished subtelomeric chromatin knob formation","synonyms":[{"name":"abolished subtelomeric chromatin condensation","type":"broad"},{"name":"abolished subtelomeric chromatin knob assembly","type":"exact"},{"name":"knob-containing nuclei absent","type":"related"},{"name":"subtelomeric chromatin knob formation abolished","type":"exact"}],"termid":"FYPO:0006260"}


id: FYPO:0005359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at the RTS1 replication fork barrier is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12840005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal termination of RNA polymerase II transcription","termid":"FYPO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"normal termination of RNA polymerase II transcription at RTS1 barrier","synonyms":[{"name":"normal RNA polymerase II release at RTS1 barrier","type":"related"},{"name":"normal RNA polymerase II transcription termination at RTS1 barrier","type":"exact"},{"name":"normal termination of RNA polymerase II transcription at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase II transcription at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005359"}


id: PBO:0028622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2-type_prespliceosome_assembly","termid":"PBO:0028622"}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: GO:0097348
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell endocytic vesicle.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endocytic vesicle membrane","termid":"GO:0097348"}


id: GO:0034158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 8.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 8 signaling pathway","synonyms":[{"name":"TLR8 signaling pathway","type":"exact"},{"name":"toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034158"}


id: PR:000060258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe) that lacks phosphorylation on the residue at the position equivalent to Ser-52 of the amino acid sequence represented by UniProtKB:P56286. UniProtKB:P56286, Ser-52, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:31048492","PomBase:VW","PMID:28771613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tif211/UnPhos(S52)","pombase_gene_id":"SPAC3G9.09c","synonyms":[{"name":"UniProtKB:P56286-1, Ser-52, PR:000026291","type":"narrow"},{"name":"Spom-EIF2S1/UnPhos:1","type":"exact"},{"name":"Tif211/UnPhos(S52)","type":"exact"},{"name":"UniProtKB:P56286, Ser-52, PR:000026291","type":"narrow"}],"termid":"PR:000060258"}


id: PBO:0111526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 6","termid":"PBO:0111526"}


id: PBO:0053138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A","termid":"PBO:0053138"}


id: PBO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu3 and snu32 RNAs present at similar levels","termid":"PBO:0016046"}


id: PBO:0064297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 5","termid":"PBO:0064297"}


id: PBO:0075145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 1","termid":"PBO:0075145"}


id: PBO:0054610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2015","termid":"PBO:0054610"}


id: SO:1000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)uTp","type":"related"},{"name":"unorientated intrachromosomal transposition","type":"exact"}],"termid":"SO:1000162"}


id: FYPO:0002471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0002471"}


id: PR:O59855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.13","synonyms":[{"name":"Spom972h-ssa2","type":"exact"}],"termid":"PR:O59855"}


id: SO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of sequence from the Alu family of mobile elements.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alu_insertion","synonyms":[{"name":"Alu insertion","type":"exact"}],"termid":"SO:0002063"}


id: GO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one relatively unspecialized immature cystocyte of the germ-line cyst in the germarium acquires the specialized features of an oocyte. An example of this process can be found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte differentiation","termid":"GO:0009994"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"related"}],"termid":"GO:0030706"}


id: GO:0021722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"pons maturation","termid":"GO:0021586"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus maturation","synonyms":[{"name":"superior olive maturation","type":"related"}],"termid":"GO:0021722"}


id: FYECO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which histidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ his","synonyms":[{"name":"histidine added","type":"exact"}],"termid":"FYECO:0000224"}


id: PR:O14417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle assembly checkpoint protein MAD2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.06","secondary_identifiers":["PR:000035572","UniProtKB:O14417"],"synonyms":[{"name":"Spom972h-MAD2L1","type":"exact"}],"termid":"PR:O14417"}


id: PATO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated orange","synonyms":[{"name":"bright orange","type":"related"}],"termid":"PATO:0001277"}


id: PBO:0074240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 subunit beta","termid":"PBO:0074240"}


id: PBO:0088317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pof1","termid":"PBO:0088317"}


id: PBO:0086031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, abundance changes with carbon source","termid":"PBO:0086031"}


id: GO:0033006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell activation involved in immune response","synonyms":[{"name":"regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033006"}


id: GO:0020038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mechanically stable cytoskeletal structure associated with the cytoplasmic face of the pellicle and surrounding the microtubule-based cytoskeleton.","definition_xrefs":["PMID:11420112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"subpellicular network","termid":"GO:0020038"}


id: PBO:0083083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DL-glycerol-3-phosphate phosphatase involved in glycerol biosynthesis; also known as glycerol-1-phosphatase; induced in response to hyperosmotic or oxidative stress, and during diauxic shift; GPP2 has a paralog, GPP1, that arose from the whole genome duplication","termid":"PBO:0083083"}


id: GO:1901170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of naphthalene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:11133965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"naphthalene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:naph","GO:0018931"],"synonyms":[{"name":"naphthalene breakdown","type":"exact"},{"name":"naphthalene catabolism","type":"exact"},{"name":"naphthalene degradation","type":"exact"},{"name":"naphthalene metabolic process","type":"related"},{"name":"naphthalene metabolism","type":"related"}],"termid":"GO:1901170"}


id: GO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["PMID:12696888","RESID:AA0340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide cross-linking","termid":"GO:0018149"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine","secondary_identifiers":["PMID:36302388"],"termid":"GO:0046924"}


id: GO:1902133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:15949826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(+)-secoisolariciresinol metabolic process","synonyms":[{"name":"(+)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902133"}


id: FYPO:0005804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein movement within plasma membrane","termid":"FYPO:0005807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein movement within plasma membrane during vegetative growth","synonyms":[{"name":"normal protein movement within plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005804"}


id: PBO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 1","termid":"PBO:0046559"}


id: GO:1904900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myosin II filament organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22761445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"negative regulation of myosin II filament organization","synonyms":[{"name":"down regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"down regulation of myosin II filament organisation","type":"exact"},{"name":"down regulation of myosin II filament organization","type":"exact"},{"name":"down regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"down-regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"down-regulation of myosin II filament organisation","type":"exact"},{"name":"down-regulation of myosin II filament organization","type":"exact"},{"name":"down-regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"downregulation of myosin II filament assembly or disassembly","type":"related"},{"name":"downregulation of myosin II filament organisation","type":"exact"},{"name":"downregulation of myosin II filament organization","type":"exact"},{"name":"downregulation of myosin II polymerization or depolymerization","type":"related"},{"name":"inhibition of myosin II filament assembly or disassembly","type":"related"},{"name":"inhibition of myosin II filament organisation","type":"narrow"},{"name":"inhibition of myosin II filament organization","type":"narrow"},{"name":"inhibition of myosin II polymerization or depolymerization","type":"related"},{"name":"negative regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"negative regulation of myosin II filament organisation","type":"exact"},{"name":"negative regulation of myosin II polymerization or depolymerization","type":"related"}],"termid":"GO:1904900"}


id: GO:0015052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta3-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta3-adrenergic receptor activity","synonyms":[{"name":"beta3 adrenoceptor","type":"exact"}],"termid":"GO:0015052"}


id: GO:0052681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate.","definition_xrefs":["RHEA:25436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alpha-bisabolene synthase activity","secondary_identifiers":["EC:4.2.3.38","KEGG_REACTION:R08370","MetaCyc:RXN-8550"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(E)-alpha-bisabolene-forming] activity","type":"exact"},{"name":"bisabolene synthase activity","type":"broad"}],"termid":"GO:0052681"}


id: PBO:0089060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, MIZ-type","termid":"PBO:0089060"}


id: PBO:0000492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein Spo15","termid":"PBO:0000492"}


id: GO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the cytochrome b6/f complex of photosystem II.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome b/b6","type":"related"},{"name":"cytochrome b6","type":"narrow"},{"name":"cytochrome f","type":"narrow"}],"termid":"GO:0045158"}


id: PBO:0059792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 18","termid":"PBO:0059792"}


id: PBO:0028148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_box_C/D_snoRNA_3'-end_processing","termid":"PBO:0028148"}


id: PBO:0078895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 6-1","termid":"PBO:0078895"}


id: GO:0036379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smallest contractile units of a myofibril (striated muscle fiber).","definition_xrefs":["Wikipedia:Myofilament"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"myofilament","synonyms":[{"name":"striated muscle filament","type":"exact"}],"termid":"GO:0036379"}


id: PBO:0031306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell","termid":"PBO:0031306"}


id: PBO:0084049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein; negatively regulates RAS by converting it from the GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions; IRA2 has a paralog, IRA1, that arose from the whole genome duplication; defects in human homolog NF1 are associated with neurofibromatosis","termid":"PBO:0084049"}


id: GO:0034314
data:
  {"annotated_genes":["SJAG_04100","SJAG_01732","SJAG_04479","SJAG_01268","SJAG_01964","SJAG_01384","SJAG_02228","SJAG_03455","SJAG_02245","SJAG_02075","SJAG_03086"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84383,86878,94096,95006,95846,96021,98910,99487,101328,103335],"is_not":false,"summary":null,"term":"GO:0034314"},{"annotations":[87073],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins.","definition_xrefs":["GOC:mah","PMID:16959963","PMID:18640983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament branch nucleation","type":"exact"},{"name":"branched actin filament nucleation","type":"exact"}],"termid":"GO:0034314","terms_by_termid":{"GO:0034314":null,"GO:0034316":null}}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: PBO:0079607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 G1","termid":"PBO:0079607"}


id: GO:0006617
data:
  {"annotated_genes":["SJAG_02456","SJAG_01759","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87808,110539,111292],"is_not":false,"summary":null,"term":"GO:0006617"}]},"cv_name":"biological_process","definition":"The process in which SRP binds to the signal peptide in a nascent protein, causing protein elongation to pause, during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_02456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence recognition","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence recognition","type":"exact"},{"name":"signal sequence recognition during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006617","terms_by_termid":{"GO:0006617":null}}


id: GO:0097137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAD-BCL-xl complex","termid":"GO:0097137"}


id: GO:1905143
data:
  {"annotated_genes":["SJAG_00353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97269],"is_not":false,"summary":null,"term":"GO:1905143"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eukaryotic translation initiation factor 2 complex.","definition_xrefs":["PMID:23775072","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00353":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-2 assembly","type":"exact"},{"name":"eIF-2 formation","type":"exact"},{"name":"eIF2 assembly","type":"exact"},{"name":"eIF2 formation","type":"exact"},{"name":"eukaryotic translation initiation factor 2 complex formation","type":"exact"}],"termid":"GO:1905143","terms_by_termid":{"GO:1905143":null}}


id: PBO:0073511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 4B","termid":"PBO:0073511"}


id: GO:0046466
data:
  {"annotated_genes":["SJAG_01219","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86039,105001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"cellular lipid catabolic process","termid":"GO:0044242"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"membrane lipid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid breakdown","type":"exact"},{"name":"membrane lipid catabolism","type":"exact"},{"name":"membrane lipid degradation","type":"exact"},{"name":"membrane lipid peroxidation","type":"broad"}],"termid":"GO:0046466","terms_by_termid":{"GO:0046521":null}}


id: PBO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a (predicted)","termid":"PBO:0002789"}


id: PBO:0029102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_asparagine_level","termid":"PBO:0029102"}


id: PBO:0061209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noggin","termid":"PBO:0061209"}


id: GO:0140698
data:
  {"annotated_genes":["SJAG_03449","SJAG_02698","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85288,87524,90784],"is_not":false,"summary":null,"term":"GO:0140698"}]},"cv_name":"biological_process","definition":"The process in which physical connections are formed between sub-telomeric heterochromatin and the nuclear envelope facilitating bouquet formation.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_02698":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"attachment of telomeric heterochromatin to nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to nuclear envelope","type":"broad"},{"name":"attachment of telomeric chromatin to nuclear envelope","type":"broad"},{"name":"heterochromatin organization","type":"broad"}],"termid":"GO:0140698","terms_by_termid":{"GO:0140698":null}}


id: PBO:0053306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28A pseudogene 3","termid":"PBO:0053306"}


id: GO:0051900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial depolarization","termid":"GO:0051900"}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: PBO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS family histone acetyltransferase subunit Yaf9","termid":"PBO:0001510"}


id: PBO:0051361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-11","termid":"PBO:0051361"}


id: PBO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein epsilon 1","termid":"PBO:0048656"}


id: PBO:0090769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip4","termid":"PBO:0090769"}


id: PBO:0065317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 40B (pseudogene)","termid":"PBO:0065317"}


id: GO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The peripheral segment of respiratory chain complex I located in the mitochondrion. Respiratory chain complex I is an enzyme of the respiratory chain, consisting of at least 34 polypeptide chains. The electrons of NADH enter the chain at this complex. The complete complex is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix.","definition_xrefs":["ISBN:0716749556","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"part_of","term_name":"mitochondrial respiratory chain complex I","termid":"GO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I, peripheral segment","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex, peripheral segment","type":"broad"},{"name":"NADH-Q oxidoreductase complex, peripheral segment","type":"broad"}],"termid":"GO:0042652"}


id: PR:Q9P791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-sugar pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11839:SF1","PRO:DNx","OMA:SCHPO02666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Nudix hydrolase P35G2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.12","secondary_identifiers":["UniProtKB:Q9P791"],"synonyms":[{"name":"Spom972h-NUDT5","type":"exact"}],"termid":"PR:Q9P791"}


id: PBO:0053776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1022","termid":"PBO:0053776"}


id: PBO:0070143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 57 pseudogene","termid":"PBO:0070143"}


id: GO:0006227
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114152],"is_not":false,"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUDP, deoxyuridine diphosphate (2'-deoxy-5'-uridylyl phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009197"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUDP metabolic process","termid":"GO:0046077"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dUDP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUDP anabolism","type":"exact"},{"name":"dUDP biosynthesis","type":"exact"},{"name":"dUDP formation","type":"exact"},{"name":"dUDP synthesis","type":"exact"}],"termid":"GO:0006227","terms_by_termid":{"GO:0006227":null}}


id: PBO:0015661
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae AOS1","termid":"PBO:0015661"}


id: FYPO:0006344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the plasma membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to plasma membrane during vegetative growth","synonyms":[{"name":"ectopic protein localization to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalised to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006344"}


id: PBO:0109607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A15","termid":"PBO:0109607"}


id: PBO:0003885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp1","termid":"PBO:0003885"}


id: GO:1900763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of averantin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"averantin biosynthetic process","synonyms":[{"name":"averantin anabolism","type":"exact"},{"name":"averantin biosynthesis","type":"exact"},{"name":"averantin formation","type":"exact"},{"name":"averantin synthesis","type":"exact"}],"termid":"GO:1900763"}


id: GO:0060947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a cardiac vascular smooth muscle cell. A cardiac vascular smooth muscle cell covers the heart vasculature and lacks transverse striations in its constituent fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0060947"}


id: PBO:0074826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 22","termid":"PBO:0074826"}


id: GO:2000897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an amylopectin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin catabolic process","synonyms":[{"name":"Amylopectin catabolism","type":"exact"}],"termid":"GO:2000897"}


id: FYPO:0009055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to ethyl methanesulfonate","synonyms":[{"name":"resistance to ethyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to ethyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistant to ethyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009055"}


id: IAO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"iao","definition":"For external terms/classes, the ontology from which the term was imported","definition_xrefs":["OBI:mc","OBI:ar"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imported from","termid":"IAO:0000412"}


id: GO:0019444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including catechol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"tryptophan catabolic process to catechol","secondary_identifiers":["MetaCyc:TRPCAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to catechol","type":"exact"},{"name":"tryptophan degradation to catechol","type":"exact"}],"termid":"GO:0019444"}


id: PBO:0041397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 15","termid":"PBO:0041397"}


id: PR:O13844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19G12.05 gene.","definition_xrefs":["UniProtKB:O13844","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C19G12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.05","synonyms":[{"name":"Spom972h-SPAC19G12.05","type":"exact"}],"termid":"PR:O13844"}


id: GO:1903599
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67999],"is_not":false,"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["PMID:21753002","GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006914","GO:0007005","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of mitochondrion degradation","type":"related"},{"name":"activation of mitophagy","type":"narrow"},{"name":"positive regulation of mitochondrial degradation","type":"broad"},{"name":"up regulation of mitochondrion degradation","type":"broad"},{"name":"up regulation of mitophagy","type":"exact"},{"name":"up-regulation of mitochondrion degradation","type":"broad"},{"name":"up-regulation of mitophagy","type":"exact"},{"name":"upregulation of mitochondrion degradation","type":"broad"},{"name":"upregulation of mitophagy","type":"exact"}],"termid":"GO:1903599","terms_by_termid":{"GO:1903599":null}}


id: PBO:0026708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_stalled_replication_fork","termid":"PBO:0026708"}


id: PBO:0088019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type V myosin motor involved in actin-based transport of cargos; required for the polarized delivery of secretory vesicles, the vacuole, late Golgi elements, peroxisomes, lipid droplets, and the mitotic spindle; MYO2 has a paralog, MYO4, that arose from the whole genome duplication","termid":"PBO:0088019"}


id: PBO:0040314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 8","termid":"PBO:0040314"}


id: PBO:0087291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA2 at HML; homeobox-domain protein that associates with Mcm1p in haploid cells to repress a-specific gene expression and interacts with a1p in diploid cells to repress haploid-specific gene expression","termid":"PBO:0087291"}


id: GO:0004044
data:
  {"annotated_genes":["SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93986],"is_not":false,"summary":null,"term":"GO:0004044"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H2O.","definition_xrefs":["EC:2.4.2.14","RHEA:14905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"amidophosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PRPPAMIDOTRANS-RXN","Reactome:R-HSA-73815","KEGG_REACTION:R01072"],"synonyms":[{"name":"5'-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosylamine:diphosphate phospho-alpha-D-ribosyltransferase (glutamate-amidating)","type":"related"},{"name":"5-phosphororibosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"alpha-5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine 5-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosyldiphosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine ribosylpyrophosphate 5-phosphate amidotransferase activity","type":"related"},{"name":"phosphoribose pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyldiphosphate 5-amidotransferase activity","type":"related"},{"name":"phosphoribosylpyrophosphate glutamyl amidotransferase activity","type":"related"}],"termid":"GO:0004044","terms_by_termid":{"GO:0004044":null}}


id: GO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3dg product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"complement component C3dg binding","termid":"GO:0001853"}


id: GO:0071957
data:
  {"annotated_genes":["SJAG_06270","SJAG_01215","SJAG_01386","SJAG_03936","SJAG_04558","SJAG_03048","SJAG_04943","SJAG_04468","SJAG_02514","SJAG_03508","SJAG_04140","SJAG_02609","SJAG_01082","SJAG_03835","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89020,91823,95830,98527,98988,101200,102549,103719,105030,105799,106706,106766,107376,109022,110664],"is_not":false,"summary":null,"term":"GO:0071957"}]},"cv_name":"cellular_component","definition":"The spindle pole body that exists in a cell prior to spindle pole body duplication. An old spindle pole body segregates to the daughter cell upon mitosis, and lacks active proteins involved in signaling exit from mitosis.","definition_xrefs":["GOC:vw","GOC:mah","PMID:15132994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01215":null,"SJAG_01386":null,"SJAG_02514":null,"SJAG_02609":null,"SJAG_03048":null,"SJAG_03508":null,"SJAG_03835":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04468":null,"SJAG_04558":null,"SJAG_04943":null,"SJAG_05196":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"old mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"old SPB","type":"exact"}],"termid":"GO:0071957","terms_by_termid":{"GO:0071957":null}}


id: GO:1900935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"regulation of nonadec-1-ene formation","type":"exact"},{"name":"regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900935"}


id: PBO:0053191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA negative regulator of fibroblast-like synoviocyte migration, SYNCRIP interacting","termid":"PBO:0053191"}


