# terms

id: PBO:0052460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 8 pseudogene 1","termid":"PBO:0052460"}


id: PBO:0045266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1","termid":"PBO:0045266"}


id: GO:1902290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["PMID:16040633","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of defense response to oomycetes","termid":"GO:1902288"},{"relation_name":"positively_regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response to oomycetes","synonyms":[{"name":"activation of defense response to oomycetes","type":"narrow"},{"name":"up regulation of defense response to oomycetes","type":"exact"},{"name":"up-regulation of defense response to oomycetes","type":"exact"},{"name":"upregulation of defense response to oomycetes","type":"exact"}],"termid":"GO:1902290"}


id: GO:0060681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a branch of the ureteric bud along its axis.","definition_xrefs":["PMID:16916378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}


id: MOD:00242
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(ADP-ribosyl)-L-serine.","definition_xrefs":["PubMed:3141412","Unimod:213#S","PubMed:15842200","RESID:AA0237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-serine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-propanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"MOD_RES ADP-ribosylserine","type":"exact"},{"name":"O-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-serine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-serine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"OADPRibSer","type":"exact"}],"termid":"MOD:00242"}


id: PBO:0061219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 10","termid":"PBO:0061219"}


id: GO:0031463
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90696],"is_not":false,"summary":null,"term":"GO:0031463"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul3 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a BTB-domain-containing protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul3-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"BC3B complex","type":"exact"},{"name":"BCR3 complex","type":"exact"},{"name":"CDL3 complex","type":"exact"},{"name":"CRL3 complex","type":"exact"},{"name":"SCF3 complex","type":"related"},{"name":"cullin-RING ligase 3","type":"exact"}],"termid":"GO:0031463","terms_by_termid":{"GO:0031463":null}}


id: PBO:0045836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 26","termid":"PBO:0045836"}


id: PBO:0042552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 15","termid":"PBO:0042552"}


id: PBO:0085261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral protein of cytosolic face of mitochondrial outer membrane; required for mitochondrial fission; interacts with Fis1p and with the self-assembled oligomeric form of the dynamin-related GTPase Dnm1p; contains WD repeats; MDV1 has a paralog, CAF4, that arose from the whole genome duplication","termid":"PBO:0085261"}


id: PBO:0047249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member C","termid":"PBO:0047249"}


id: GO:0000350
data:
  {"annotated_genes":["SJAG_02455","SJAG_01152","SJAG_01214","SJAG_01200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101021,105050,105738,110533],"is_not":false,"summary":null,"term":"GO:0000350"}]},"cv_name":"biological_process","definition":"Conformational rearrangement of the spliceosomal complex containing the RNA products from the 1st step of splicing to form the catalytic site for the second step of splicing.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"generation of catalytic spliceosome for second transesterification step","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000359","GO:0000358"],"synonyms":[{"name":"catalytic spliceosome assembly for second transesterification step","type":"related"},{"name":"formation of catalytic U12-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic U2-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic spliceosome for second transesterification step","type":"exact"},{"name":"formation of spliceosomal A2-2 complex","type":"narrow"},{"name":"formation of spliceosomal C1 complex","type":"narrow"},{"name":"lariat formation, 5'-splice site cleavage","type":"related"},{"name":"spliceosomal A2-3 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-3 complex formation","type":"narrow"},{"name":"spliceosomal C2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal C2 complex formation","type":"narrow"}],"termid":"GO:0000350","terms_by_termid":{"GO:0000350":null}}


id: PBO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-17 (pseudogene)","termid":"PBO:0051435"}


id: PBO:0042087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 154","termid":"PBO:0042087"}


id: FYPO:0006631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin","synonyms":[{"name":"decreased protein localisation to chromatin","type":"exact"},{"name":"reduced protein localization to chromatin","type":"exact"}],"termid":"FYPO:0006631"}


id: PBO:0026940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spore_germination_frequency","termid":"PBO:0026940"}


id: GO:0140898
data:
  {"annotated_genes":["SJAG_03047","SJAG_00170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98576,105855],"is_not":false,"summary":null,"term":"GO:0140898"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process in which CENP-A is removed from euchromatin regions to prevent neocentromere formation.","definition_xrefs":["PMID:27666591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_03047":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"CENP-A eviction from euchromatin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140898","terms_by_termid":{"GO:0140898":null}}


id: PBO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php3","termid":"PBO:0001367"}


id: MOD:01341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:90#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag light d0","termid":"MOD:00468"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0 - site K","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:01341"}


id: PBO:0055842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRIG2 divergent transcript","termid":"PBO:0055842"}


id: PBO:0069429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 694, pseudogene","termid":"PBO:0069429"}


id: SO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a proplastid such as an immature chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_sequence","synonyms":[{"name":"proplastid sequence","type":"exact"}],"termid":"SO:0000748"}


id: FYPO:0007068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin located in heterochromatin at subtelomeric regions is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PMID:18093330","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased origin firing efficiency","termid":"FYPO:0001249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased origin firing efficiency in subtelomeric heterochromatin","synonyms":[{"name":"increased origin firing efficiency at subtelomeric heterochromatin","type":"exact"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased origin firing efficiency in telomeric heterochromatin","type":"related"}],"termid":"FYPO:0007068"}


id: PBO:0066779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 77","termid":"PBO:0066779"}


id: PBO:0072824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component","termid":"PBO:0072824"}


id: PBO:0061273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOX4 pseudogene 1","termid":"PBO:0061273"}


id: PBO:0076104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 8 pseudogene 1","termid":"PBO:0076104"}


id: PBO:0056364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 1","termid":"PBO:0056364"}


id: FYPO:0005109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins earlier than normal.","definition_xrefs":["PMID:21518960","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to chromatin at replication origin","synonyms":[{"name":"advanced protein localization to chromatin at replication origin","type":"exact"},{"name":"premature protein localisation to chromatin at replication origin","type":"exact"},{"name":"premature protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"premature protein localization to chromatin at replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0005109"}


id: PBO:0003660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex regulatory subunit Naa25","termid":"PBO:0003660"}


id: PBO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD binding oxidoreductase (predicted)","termid":"PBO:0000160"}


id: GO:0018895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond. Dibenzothiophene derivatives can be detected in diesel oil following hydrodesulfurization treatment to remove sulfur compounds that would otherwise generate sulfur oxides during combustion.","definition_xrefs":["PMID:12147483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dibenzothiophene metabolic process","synonyms":[{"name":"dibenzothiophene metabolism","type":"exact"},{"name":"diphenylene sulfide metabolic process","type":"exact"},{"name":"diphenylene sulfide metabolism","type":"exact"}],"termid":"GO:0018895"}


id: PBO:0042037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 90B","termid":"PBO:0042037"}


id: PBO:0049719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4 pseudogene 1","termid":"PBO:0049719"}


id: GO:0031891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 1 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 2 PACAP receptor binding","type":"exact"}],"termid":"GO:0031891"}


id: SO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_gene_segment","synonyms":[{"name":"V-J-GENE","type":"exact"},{"name":"VJ gene","type":"exact"}],"termid":"SO:0000576"}


id: PBO:0027571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_distribution_during_mitotic_interphase","termid":"PBO:0027571"}


id: PBO:0029877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_centromere","termid":"PBO:0029877"}


id: PBO:0073401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 4","termid":"PBO:0073401"}


id: GO:0033746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 2 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579","PMID:22483719","PMID:29233856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0032452","GO:0140096","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3R2 demethylase activity","synonyms":[{"name":"histone H3-R2 demethylase activity","type":"exact"},{"name":"histone H3-methyl-arginine-2 demethylase activity","type":"exact"},{"name":"histone H3R2me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-R2 specific)","type":"exact"}],"termid":"GO:0033746"}


id: GO:1905370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of serine-type endopeptidase activity.","definition_xrefs":["GO_REF:0000088","PMID:1689240","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type peptidase complex","termid":"GO:1905286"},{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serine-type endopeptidase complex","termid":"GO:1905370"}


id: PBO:0045329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 7","termid":"PBO:0045329"}


id: GO:1904452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen:potassium-exchanging ATPase activity.","definition_xrefs":["PMID:11897793","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"regulation of potassium:proton exchanging ATPase activity","termid":"GO:1904451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of potassium:proton exchanging ATPase activity","synonyms":[{"name":"down regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"down regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"down regulation of H+-K+-ATPase activity","type":"exact"},{"name":"down regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"down regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"down regulation of H+/K+-ATPase activity","type":"exact"},{"name":"down regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"down regulation of H,K-ATPase activity","type":"exact"},{"name":"down regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"down regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"down regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"down regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"down regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"down-regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"down-regulation of H+-K+-ATPase activity","type":"exact"},{"name":"down-regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"down-regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of H+/K+-ATPase activity","type":"exact"},{"name":"down-regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of H,K-ATPase activity","type":"exact"},{"name":"down-regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"down-regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"down-regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"down-regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"downregulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"downregulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"downregulation of H+-K+-ATPase activity","type":"exact"},{"name":"downregulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"downregulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"downregulation of H+/K+-ATPase activity","type":"exact"},{"name":"downregulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"downregulation of H,K-ATPase activity","type":"exact"},{"name":"downregulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"downregulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"downregulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"downregulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"downregulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"inhibition of (K+ + H+)-ATPase activity","type":"narrow"},{"name":"inhibition of ATP phosphohydrolase (H+/K+-exchanging)","type":"narrow"},{"name":"inhibition of H+-K+-ATPase activity","type":"narrow"},{"name":"inhibition of H+/K(+)-ATPase activity","type":"narrow"},{"name":"inhibition of H+/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of H+/K+-ATPase activity","type":"narrow"},{"name":"inhibition of H+/K+-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of H,K-ATPase activity","type":"narrow"},{"name":"inhibition of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"inhibition of gastric H+/K+ ATPase","type":"narrow"},{"name":"inhibition of hydrogen/potassium-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of hydrogen:potassium exchanging ATPase activity","type":"narrow"},{"name":"inhibition of hydrogen:potassium-exchanging ATPase activity","type":"narrow"},{"name":"negative regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"negative regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"negative regulation of H+-K+-ATPase activity","type":"exact"},{"name":"negative regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"negative regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of H+/K+-ATPase activity","type":"exact"},{"name":"negative regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of H,K-ATPase activity","type":"exact"},{"name":"negative regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"negative regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"negative regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"negative regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1904452"}


id: PBO:0065994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid induced 14","termid":"PBO:0065994"}


id: PBO:0046308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease domain containing 1","termid":"PBO:0046308"}


id: PR:000027523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the yeast SLD2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:11937031","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication and checkpoint protein 1","type":"exact"},{"name":"DRC1","type":"related"},{"name":"SLD2","type":"exact"}],"termid":"PR:000027523"}


id: GO:0000964
data:
  {"annotated_genes":["SJAG_02526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110070],"is_not":false,"summary":null,"term":"GO:0000964"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an RNA molecule transcribed from a mitochondrial genome; occurs in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02526":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial RNA 5' end processing","type":"related"}],"termid":"GO:0000964","terms_by_termid":{"GO:0000964":null}}


id: GO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"alginic acid catabolic process","synonyms":[{"name":"alginate catabolic process","type":"exact"},{"name":"alginate catabolism","type":"exact"},{"name":"alginic acid breakdown","type":"exact"},{"name":"alginic acid catabolism","type":"exact"},{"name":"alginic acid degradation","type":"exact"}],"termid":"GO:0042122"}


id: GO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cholesterol import","synonyms":[{"name":"cholesterol uptake","type":"exact"}],"termid":"GO:0070508"}


id: PBO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase (predicted)","termid":"PBO:0001784"}


id: GO:0060584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or prostaglandin-endoperoxide synthase activity. Prostaglandin-endoperoxide synthase activity is the catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin-endoperoxide synthase activity","synonyms":[{"name":"regulation of (PG)H synthase activity","type":"related"},{"name":"regulation of PG synthetase activity","type":"related"},{"name":"regulation of fatty acid cyclooxygenase activity","type":"related"},{"name":"regulation of prostaglandin synthetase activity","type":"related"}],"termid":"GO:0060584"}


id: GO:1904341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of colon smooth muscle contraction.","definition_xrefs":["PMID:24170253","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"regulates","term_name":"colon smooth muscle contraction","termid":"GO:1990765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of colon smooth muscle contraction","termid":"GO:1904341"}


id: PBO:0080166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 1","termid":"PBO:0080166"}


id: GO:0060783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein in the mesenchymal cells of the prostate that contribute to the progression of the prostate over time. This process contributes to lung development.","definition_xrefs":["PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"epithelial-mesenchymal signaling involved in prostate gland development","termid":"GO:0060738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal smoothened signaling pathway involved in prostate gland development","synonyms":[{"name":"mesenchymal hedgehog signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal hh signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal smoothened signalling pathway involved in prostate gland development","type":"exact"}],"termid":"GO:0060783"}


id: GO:0004360
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98962],"is_not":false,"summary":null,"term":"GO:0004360"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.","definition_xrefs":["RHEA:13237","EC:2.6.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase (isomerizing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4085027","MetaCyc:L-GLN-FRUCT-6-P-AMINOTRANS-RXN","Reactome:R-HSA-449715","KEGG_REACTION:R00768"],"synonyms":[{"name":"D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"GlcN6P synthase activity","type":"related"},{"name":"L-glutamine-D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"L-glutamine:D-fructose-6-phosphate isomerase (deaminating)","type":"related"},{"name":"glucosamine 6-phosphate synthase activity","type":"related"},{"name":"glucosamine--fructose-6-phosphate aminotransferase (isomerizing) activity","type":"related"},{"name":"glucosamine-6-phosphate isomerase (glutamine-forming) activity","type":"exact"},{"name":"glucosamine-6-phosphate synthase activity","type":"related"},{"name":"glucosaminephosphate isomerase","type":"broad"},{"name":"hexosephosphate aminotransferase activity","type":"related"}],"termid":"GO:0004360","terms_by_termid":{"GO:0004360":null}}


id: GO:0101028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the surface tension of a liquid.","definition_xrefs":["PMID:20949060","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of liquid surface tension (obsolete GO:0101028)","synonyms":[{"name":"positive regulation of surface tension of a liquid","type":"exact"}],"termid":"GO:0101028"}


id: PBO:0051766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 9","termid":"PBO:0051766"}


id: SO:1001262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a translational frameshift of -1.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translationally_frameshifted","termid":"SO:0000887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_translationally_frameshifted","synonyms":[{"name":"minus 1 translationally frameshifted","type":"exact"}],"termid":"SO:1001262"}


id: GO:0140717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont into host plant tissue via the stromata, microscopic pores in the epidermis of the aerial parts of terrestrial plants. These pores are essential for photosynthesis, as they allow CO2 to diffuse into the plant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17419713","PMID:16959560","PMID:29307013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into host through the stromata","termid":"GO:0140717"}


id: PBO:0056849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 1","termid":"PBO:0056849"}


id: GO:0098609
data:
  {"annotated_genes":["SJAG_00910","SJAG_00156","SJAG_03802","SJAG_04720","SJAG_04191","SJAG_03484","SJAG_00239","SJAG_01975","SJAG_03473","SJAG_02380","SJAG_00926","SJAG_01253","SJAG_01778"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97814,97815,99147,99148],"is_not":false,"summary":null,"term":"GO:0098609"},{"annotations":[88679,96972,88678,98891,112120,96971,112121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[99729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[95459,94752],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0022408"},{"annotations":[102421,99730],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[112309,107552,104941,110260,102062,104818],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016337"],"synonyms":[{"name":"single organismal cell-cell adhesion","type":"related"}],"termid":"GO:0098609","terms_by_termid":{"GO:0000128":null,"GO:0022408":null,"GO:0036349":null,"GO:0060257":null,"GO:0098609":null,"GO:1900735":null}}


id: PBO:0078223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-1","termid":"PBO:0078223"}


id: PBO:0003786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15 (predicted)","termid":"PBO:0003786"}


id: GO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in the aorta and responding to the input via central nervous system control.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback","synonyms":[{"name":"aortic arch baroreceptor control of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003026"}


id: internal:alternate
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate","termid":"internal:alternate"}


id: PBO:0065255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 21","termid":"PBO:0065255"}


id: PBO:0071451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 57","termid":"PBO:0071451"}


id: PBO:0082237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-isopropylmalate synthase (2-isopropylmalate synthase); the main isozyme responsible for the first step in the leucine biosynthesis pathway; LEU4 has a paralog, LEU9, that arose from the whole genome duplication","termid":"PBO:0082237"}


id: FYECO:0000360
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which terbinafine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ terbinafine","termid":"FYECO:0000360"}


id: PBO:0074104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 1","termid":"PBO:0074104"}


id: GO:0019361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","termid":"GO:0046432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process","secondary_identifiers":["MetaCyc:P2-PWY"],"synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA anabolism","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthesis","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA formation","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA synthesis","type":"exact"}],"termid":"GO:0019361"}


id: PBO:0083899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain-containing component of the Mre11 complex; MRE11-RAD50-XRS2 complex is involved in double strand breaks, meiotic recombination, telomere maintenance, and checkpoint signaling;  FHA domain is required for activation of Tel1p","termid":"PBO:0083899"}


id: SO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located in a conserved intergenic region, between genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_intergenic_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:conserved_intergenic_variant","type":"exact"},{"name":"conserved intergenic variant","type":"exact"},{"name":"snpEff:INTERGENIC_CONSERVED","type":"exact"}],"termid":"SO:0002017"}


id: PBO:0027048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Crb2_foci_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027048"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:jid","GOC:mtg_muscle","GOC:ef","GOC:dph","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: PBO:0056030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte specific transcript 1","termid":"PBO:0056030"}


id: FYPO:0005901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is increased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PMID:19570908","PomBase:mah","GO:0030048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of actin filament-based movement","synonyms":[{"name":"increased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"increased rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005901"}


id: PBO:0015223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit Gls2","termid":"PBO:0015223"}


id: GO:0044528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of mitochondrial mRNA molecules to degradation. Includes processes that both stabilize and destabilize mitochondrial mRNAs.","definition_xrefs":["GOC:jl","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of mitochondrial mRNA stability","termid":"GO:0044528"}


id: PBO:0055655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3095","termid":"PBO:0055655"}


id: PBO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2439","termid":"PBO:0055024"}


id: SO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A homologous_region that is paralogous to another region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paralogous","termid":"SO:0000859"},{"relation_name":"is_a","term_name":"homologous_region","termid":"SO:0000853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Paralog#Paralogy"],"synonyms":[{"name":"paralog","type":"exact"},{"name":"paralogous region","type":"exact"},{"name":"paralogue","type":"exact"}],"termid":"SO:0000854"}


id: PBO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-65 (pseudogene)","termid":"PBO:0051475"}


id: PBO:0088086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX (ubiquitin regulatory X) domain-containing protein; interacts with Cdc48p; UBX7 has a paralog, UBX6, that arose from the whole genome duplication","termid":"PBO:0088086"}


id: PBO:0073492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase 1","termid":"PBO:0073492"}


id: PBO:0084942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug efflux pump of the major facilitator superfamily; required for resistance to aminotriazole and 4-nitroquinoline-N-oxide; ATR1 has a paralog, YMR279C, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084942"}


id: PBO:0083998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria; binds AU-rich RNA","termid":"PBO:0083998"}


id: PBO:0111689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, subunit beta","termid":"PBO:0111689"}


id: GO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["GOC:dh","PMID:17204561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"pyrrolysine metabolic process","termid":"GO:0071525"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrrolysine biosynthetic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct biosynthetic process","type":"exact"},{"name":"pyrrolysine anabolism","type":"exact"},{"name":"pyrrolysine biosynthesis","type":"exact"},{"name":"pyrrolysine formation","type":"exact"},{"name":"pyrrolysine synthesis","type":"exact"}],"termid":"GO:0071524"}


id: PBO:0059774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature T cell proliferation 1","termid":"PBO:0059774"}


id: GO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle hypertrophy","termid":"GO:0014897"}


id: PBO:0044580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 2","termid":"PBO:0044580"}


id: PBO:0075777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 6","termid":"PBO:0075777"}


id: GO:0102990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(pentadeca-8,11,14-trien-1-yl)resorcinol + S-adenosyl-L-methionine = H+ + 5-(pentadeca-8,11,14-trien-1-yl)resorcinol monomethyl ether + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"5-n-alk(en)ylresorcinol O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9619","RHEA:26325"],"termid":"GO:0102990"}


id: PBO:0068705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 86, pseudogene","termid":"PBO:0068705"}


id: PBO:0057391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548d-2","termid":"PBO:0057391"}


id: PBO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic APC inhibitor Mes1","termid":"PBO:0033816"}


id: PBO:0083166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF MAK3/YPR051W","termid":"PBO:0083166"}


id: GO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the by propagation of the molecular signals via beta-catenin, and end with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["PMID:11532397","PMID:19619488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical Wnt signaling pathway","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"canonical Wnt receptor signaling pathway","type":"exact"},{"name":"canonical Wnt-activated signaling pathway","type":"exact"},{"name":"frizzled-1 receptor signaling pathway","type":"narrow"}],"termid":"GO:0060070"}


id: PBO:0026939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_I","termid":"PBO:0026939"}


id: PBO:0028497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028497"}


id: GO:0055107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to a secretory granule. The secretory granule is a membrane-bounded particle, usually protein, formed in the granular endoplasmic reticulum and the Golgi complex.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Golgi to secretory granule transport","termid":"GO:0055107"}


id: PBO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 7","termid":"PBO:0043512"}


id: PR:O14290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.04 gene.","definition_xrefs":["UniProtKB:O14290","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.04","synonyms":[{"name":"Spom972h-SPAC9E9.04","type":"exact"}],"termid":"PR:O14290"}


id: PBO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 1","termid":"PBO:0045770"}


id: GO:2000730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase I transcription.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"regulates","term_name":"termination of RNA polymerase I transcription","termid":"GO:0006363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase I transcription","synonyms":[{"name":"regulation of RNA polymerase I transcription termination","type":"exact"},{"name":"regulation of transcription termination from Pol I promoter","type":"exact"},{"name":"regulation of transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2000730"}


id: PBO:0028562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_meiotic_sister_chromatid_segregation","termid":"PBO:0028562"}


id: PBO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 6","termid":"PBO:0048506"}


id: GO:0010545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and modulates the activity of the molecular chaperone Hsp90.","definition_xrefs":["GOC:tb","GOC:dph","PMID:11146632"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp90 protein regulator activity (obsolete GO:0010545)","synonyms":[{"name":"Hsp90 protein regulator activity","type":"exact"}],"termid":"GO:0010545"}


id: PBO:0003581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein implicated in cell cycle regulation","termid":"PBO:0003581"}


id: PBO:0057663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1255b-1","termid":"PBO:0057663"}


id: GO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of a plasma membrane-derived thylakoid.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"is_a","term_name":"plasma membrane-derived chromatophore membrane","termid":"GO:0042717"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid membrane","synonyms":[{"name":"plasma membrane thylakoid membrane","type":"exact"}],"termid":"GO:0031676"}


id: GO:0007011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytoskeleton (obsolete GO:0007011)","synonyms":[{"name":"regulation of cytoskeleton","type":"exact"}],"termid":"GO:0007011"}


id: PBO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COX18","termid":"PBO:0017090"}


id: PBO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member A","termid":"PBO:0039596"}


id: GO:1903981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to enterobactin.","definition_xrefs":["GO_REF:0000067","PMID:21951132","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"enterobactin binding","synonyms":[{"name":"enterochelin binding","type":"exact"},{"name":"siderophore binding","type":"broad"}],"termid":"GO:1903981"}


id: GO:0047703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-nitropropanoate + NADP+ = 3-nitroacrylate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.16","RHEA:23892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-nitroacrylate reductase activity","secondary_identifiers":["MetaCyc:BETA-NITROACRYLATE-REDUCTASE-RXN","KEGG_REACTION:R03900"],"synonyms":[{"name":"3-nitropropanoate:NADP+ oxidoreductase activity","type":"related"},{"name":"b-nitroacrylate reductase activity","type":"exact"}],"termid":"GO:0047703"}


id: GO:0023026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MHC class II protein complex binding","termid":"GO:0023026"}


id: FYPO:0006670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a haploid cell undergoes meiotic cell cycle.","definition_xrefs":["PomBase:mlr","PMID:9755190","PMID:31278118","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"meiotic cell cycle entry in haploid cell","synonyms":[{"name":"haploid meiosis","type":"narrow"},{"name":"meiosis in haploid cell","type":"related"}],"termid":"FYPO:0006670"}


id: PBO:0059004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMADHC divergent transcript","termid":"PBO:0059004"}


id: PBO:0086427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hexose transporter that is nearly identical to Hxt11p; has similarity to major facilitator superfamily (MFS) transporters, expression of HXT9 is regulated by transcription factors Pdr1p and Pdr3p","termid":"PBO:0086427"}


id: SO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby a translocation in which one of the four broken ends loses a segment before re-joining.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_intrachromosomal_transposition","synonyms":[{"name":"deficient intrachromosomal transposition","type":"exact"}],"termid":"SO:0000062"}


id: PBO:0071745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 1","termid":"PBO:0071745"}


id: GO:0014887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle adaptation","synonyms":[{"name":"cardiac muscle plasticity","type":"related"}],"termid":"GO:0014887"}


id: PBO:0041063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF1 RNA polymerase III transcription initiation factor subunit","termid":"PBO:0041063"}


id: PATO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000727 behavioral function value (obsolete PATO:0000727)","termid":"PATO:0000727"}


id: PBO:0038366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component_process","termid":"PBO:0038366"}


id: GO:1904361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spore germination.","definition_xrefs":["GO_REF:0000058","PMID:8798577","GOC:TermGenie","PMID:14718564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"positively_regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spore germination","secondary_identifiers":["GO:0075007"],"synonyms":[{"name":"activation of spore germination","type":"narrow"},{"name":"positive regulation of spore germination on or near host","type":"narrow"},{"name":"up regulation of spore germination","type":"exact"},{"name":"up-regulation of spore germination","type":"exact"},{"name":"upregulation of spore germination","type":"exact"}],"termid":"GO:1904361"}


id: MOD:00856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to an L-alaninium (protonated L-alanine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"}


id: GO:2000862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"negatively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen secretion","synonyms":[{"name":"negative regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000862"}


id: PBO:0030371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030371"}


id: FYPO:0001682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of a salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to salt stress","synonyms":[{"name":"normal increase in trehalase activity in response to salt stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to salt stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to salt stress","type":"broad"}],"termid":"FYPO:0001682"}


id: PBO:0018243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein","termid":"PBO:0018243"}


id: FYPO:0003181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I does not occur.","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished meiotic DNA double-strand break formation","synonyms":[{"name":"absent meiotic DNA double-strand break formation","type":"exact"},{"name":"meiotic DNA double-strand break formation abolished","type":"exact"}],"termid":"FYPO:0003181"}


id: GO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive energy taxis","termid":"GO:0052128"}


id: GO:0015189
data:
  {"annotated_genes":["SJAG_04637","SJAG_03256","SJAG_02029","SJAG_04725","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93544,96529,98978,100021,106213],"is_not":false,"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-lysine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005293"],"synonyms":[{"name":"L-lysine permease","type":"related"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"},{"name":"lysine permease activity","type":"related"}],"termid":"GO:0015189","terms_by_termid":{"GO:0015189":null}}


id: PBO:0068213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 520","termid":"PBO:0068213"}


id: PBO:0029334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_phosphorylation","termid":"PBO:0029334"}


id: GO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"positively_regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell differentiation","synonyms":[{"name":"activation of endothelial cell differentiation","type":"narrow"},{"name":"stimulation of endothelial cell differentiation","type":"narrow"},{"name":"up regulation of endothelial cell differentiation","type":"exact"},{"name":"up-regulation of endothelial cell differentiation","type":"exact"},{"name":"upregulation of endothelial cell differentiation","type":"exact"}],"termid":"GO:0045603"}


id: GO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell membrane of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"other organism part","termid":"GO:0044217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism cell membrane","secondary_identifiers":["GO:0044279"],"synonyms":[{"name":"foreign membrane","type":"related"},{"name":"other organism membrane","type":"broad"}],"termid":"GO:0044218"}


id: PBO:0044698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 pseudogene 1","termid":"PBO:0044698"}


id: GO:0003858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + H+ + NADH.","definition_xrefs":["RHEA:20521","EC:1.1.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01361","Reactome:R-HSA-73920","Reactome:R-HSA-5696457","MetaCyc:3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN","Reactome:R-HSA-73912"],"synonyms":[{"name":"D-beta-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0003858"}


id: PBO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR antisense RNA 1","termid":"PBO:0045959"}


id: PR:Q9P370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein bud20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.11c","synonyms":[{"name":"Spom972h-SPAC19B12.11c","type":"exact"}],"termid":"PR:Q9P370"}


id: PBO:0030705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_4-nitroquinoline_N-oxide","termid":"PBO:0030705"}


id: PBO:0034798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin N-acetyltransferase/DNA polymerase eta Eso1 fusion protein","termid":"PBO:0034798"}


id: GO:0098800
data:
  {"annotated_genes":["SJAG_03648","SJAG_00080","SJAG_01190","SJAG_00755","SJAG_01120","SJAG_02002","SJAG_03114","SJAG_02809","SJAG_MIT13","SJAG_00438","SJAG_05629","SJAG_00404","SJAG_02398","SJAG_MIT20","SJAG_MIT09","SJAG_05204","SJAG_03560","SJAG_00373","SJAG_01179","SJAG_00542","SJAG_07006","SJAG_02564","SJAG_00601","SJAG_01816","SJAG_05241","SJAG_02105","SJAG_04568","SJAG_00976","SJAG_04237","SJAG_03920","SJAG_01671","SJAG_00915","SJAG_01615","SJAG_02077","SJAG_04122","SJAG_01597","SJAG_04218","SJAG_02646","SJAG_01763","SJAG_02504","SJAG_01077","SJAG_02501","SJAG_04432","SJAG_MIT03","SJAG_01879","SJAG_00133","SJAG_MIT15","SJAG_07008","SJAG_01865","SJAG_00354","SJAG_MIT37","SJAG_07007","SJAG_04014","SJAG_01640","SJAG_03490","SJAG_02598","SJAG_00836","SJAG_01490","SJAG_07003","SJAG_02028","SJAG_03337","SJAG_01355","SJAG_MIT04","SJAG_00985","SJAG_03925","SJAG_00260","SJAG_01442"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88006,109928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032478"},{"annotations":[97264,114851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031942"},{"annotations":[105914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990524"},{"annotations":[107173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005745"},{"annotations":[113917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140275"},{"annotations":[97869,110802,106201,103493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061617"},{"annotations":[105376,104254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042720"},{"annotations":[115171,115180,89453,91017,115176,104079,97983,99857,90051],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000276"},{"annotations":[89030,85341],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005754"},{"annotations":[101169,104969,99208],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005756"},{"annotations":[103989,112005,99828],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000274"},{"annotations":[112915,85395,109377,85031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005749"},{"annotations":[113814,100250,104138,111258,86180,114279,115168,109583,100655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005750"},{"annotations":[88130,115164,111610,112976,115143,115187,85433,104463,110820,84426,110398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005751"},{"annotations":[85742,106062,95406,99456,107980,96481],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0001405"},{"annotations":[103470,99098,109379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042721"},{"annotations":[98862,111390,101349,103686,93062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005744"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the inner mitochondrial membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial inner 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mitochondrial membrane protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098800","terms_by_termid":{"GO:0000274":null,"GO:0000276":null,"GO:0001405":null,"GO:0005744":null,"GO:0005745":null,"GO:0005749":null,"GO:0005750":null,"GO:0005751":null,"GO:0005754":null,"GO:0005756":null,"GO:0031942":null,"GO:0032478":null,"GO:0042720":null,"GO:0042721":null,"GO:0061617":null,"GO:0140275":null,"GO:1990524":null}}


id: GO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates invasive growth in response to glucose limitation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter (obsolete GO:0100040)","termid":"GO:0100040"}


id: GO:0180038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin L and cyclin-dependent kinase 11 (CDK11). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:23122962","PMID:32446654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin L-CDK11 complex","synonyms":[{"name":"Cdk11-Cyclin L complex","type":"exact"}],"termid":"GO:0180038"}


id: PBO:0079407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 1","termid":"PBO:0079407"}


id: SO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 5_8S_rRNA (5.8S rRNA), which functions as a component of the large subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_5_8S_gene","synonyms":[{"name":"5.8S rRNA gene","type":"exact"},{"name":"5_8S rRNA gene","type":"exact"},{"name":"5_8S_rRNA_gene","type":"exact"}],"termid":"SO:0002240"}


id: PBO:0089275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase Pgk1","termid":"PBO:0089275"}


id: PR:Q96WW1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WW1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.08c","synonyms":[{"name":"Spom972h-omh5","type":"exact"}],"termid":"PR:Q96WW1"}


id: FYPO:0004714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid import RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Amino acid import RNAs are transcribed from genes whose products are involved in amino acid import into the cell or an organelle.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of amino acid import gene mRNA during vegetative growth","synonyms":[{"name":"decreased amino acid import gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of amino acid import gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of amino acid import gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of amino acid import gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of amino acid import gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004714"}


id: GO:2000688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000688)","synonyms":[{"name":"positive regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"positive regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000688"}


id: GO:0015574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of trehalose from one side of a membrane to the other. Trehalose is the disaccharide alpha-D-glucopyranosyl-alpha-D-glucopyranoside that acts of a reserve carbohydrate in certain fungi, algae and lichens.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"trehalose transmembrane transporter activity","secondary_identifiers":["RHEA:17629","GO:0015584"],"synonyms":[{"name":"trehalose permease activity","type":"exact"}],"termid":"GO:0015574"}


id: PBO:0012522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_specification_of","termid":"PBO:0012522"}


id: PBO:0071826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 21","termid":"PBO:0071826"}


id: FYPO:0005269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0005269"}


id: GO:0099040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a ceramide molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"},{"relation_name":"is_a","term_name":"sphingolipid translocation","termid":"GO:0099039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"ceramide translocation","termid":"GO:0099040"}


id: PBO:0036458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA binding protein involved in CCR4-NOT dependent deadenylation (predicted)","termid":"PBO:0036458"}


id: GO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the rate, frequency, or extent of lactation as a result of the secretion of a signal from the mammary fat and its reception by a mammary epithelial cell.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of lactation","termid":"GO:1903489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactation by mesenchymal-epithelial cell signaling","synonyms":[{"name":"positive regulation of lactation by mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060637"}


id: PBO:0064706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 42","termid":"PBO:0064706"}


id: GO:0052717
data:
  {"annotated_genes":["SJAG_00352","SJAG_04189"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97279,100411],"is_not":false,"summary":null,"term":"GO:0052717"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-34 + H2O = inosine-34 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["PMID:17875641","RHEA:43168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA-specific adenosine-34 deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.33"],"synonyms":[{"name":"tRNA(Ala)-A34 deaminase activity","type":"exact"}],"termid":"GO:0052717","terms_by_termid":{"GO:0052717":null}}


id: PBO:0034258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_equivalogy_relationship_with","termid":"PBO:0034258"}


id: PBO:0085731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-C protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085731"}


id: GO:0018965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any s-triazine compound. These compounds include many pesticides of widespread use in agriculture, and are characterized by a symmetrical hexameric ring consisting of alternating carbon and nitrogen atoms.","definition_xrefs":["UM-BBD_pathwayID:tria"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"s-triazine compound metabolic process","synonyms":[{"name":"s-triazine compound metabolism","type":"exact"}],"termid":"GO:0018965"}


id: GO:0008607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme phosphorylase kinase.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"phosphorylase kinase regulator activity","synonyms":[{"name":"phosphorylase kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008607"}


id: PBO:0053012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 2","termid":"PBO:0053012"}


id: PR:Q9USP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.05c","secondary_identifiers":["UniProtKB:Q9USP8"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IDH3A","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP8"}


id: GO:0070674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hypoxanthine + NAD+ + H2O = xanthine + NADH + H+.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hypoxanthine dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-9727347"],"synonyms":[{"name":"NAD-hypoxanthine dehydrogenase activity","type":"related"},{"name":"hypoxanthine oxidoreductase activity","type":"broad"},{"name":"hypoxanthine-NAD oxidoreductase activity","type":"related"},{"name":"hypoxanthine/NAD(+) oxidoreductase activity","type":"related"},{"name":"hypoxanthine/NAD+ oxidoreductase activity","type":"related"},{"name":"hypoxanthine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0070674"}


id: GO:0018453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxytetrahydrofuran = 2 H+ + 2 e- + butyrolactone.","definition_xrefs":["UM-BBD_reactionID:r0018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxytetrahydrofuran dehydrogenase activity","termid":"GO:0018453"}


id: PBO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_substance_in_growth_medium","termid":"PBO:0031044"}


id: FYPO:0007584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length is normal, and the cell contains more than one septum.","definition_xrefs":["PomBase:mah","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000032","FYPO:0000257"],"is_obsolete":false,"name":"multiseptate vegetative cell with normal cell length","synonyms":[{"name":"multiseptate cell with normal cell length during vegetative growth","type":"exact"},{"name":"multiseptate vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"multiseptate vegetative cell with normal length","type":"exact"},{"name":"normal length multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0007584"}


id: PBO:0074923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 91B","termid":"PBO:0074923"}


id: PBO:0043702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 8","termid":"PBO:0043702"}


id: GO:0009432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An error-prone process for repairing damaged microbial DNA.","definition_xrefs":["PMID:16000023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SOS response","secondary_identifiers":["Wikipedia:SOS_response"],"termid":"GO:0009432"}


id: GO:0071575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the external side of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of external side of plasma membrane (obsolete GO:0071575)","synonyms":[{"name":"integral to external leaflet of plasma membrane","type":"exact"},{"name":"integral to external side of plasma membrane","type":"narrow"}],"termid":"GO:0071575"}


id: PBO:0110391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTMR9 pseudogene 1","termid":"PBO:0110391"}


id: PBO:0070963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 1","termid":"PBO:0070963"}


id: GO:0110090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["GOC:sl","PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"},{"relation_name":"positively_regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hippocampal neuron apoptotic process","termid":"GO:0110090"}


id: GO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure contributing to an acute inflammatory response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation involved in acute inflammatory response","synonyms":[{"name":"vasodilation during acute inflammatory response","type":"related"}],"termid":"GO:0002527"}


id: PBO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class I and II (predicted)","termid":"PBO:0001538"}


id: PBO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_localization","termid":"PBO:0031830"}


id: PBO:0079389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III pseudogene 1","termid":"PBO:0079389"}


id: PBO:0081953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 4","termid":"PBO:0081953"}


id: RO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality_of","termid":"RO:0000080"}


id: GO:0103111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a [PTS enzyme I]-Npi-phospho-L-histidine + D-glucosamine = D-glucosamine 6-phosphate + a [PTS enzyme I]-L-histidine.","definition_xrefs":["EC:2.7.1.69","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-glucosamine PTS permease activity","secondary_identifiers":["MetaCyc:TRANS-RXN-167A","RHEA:37359"],"termid":"GO:0103111"}


id: GO:1902824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","PMID:23949442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of late endosome to lysosome transport","termid":"GO:1902822"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"positively_regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of late endosome to lysosome transport","synonyms":[{"name":"activation of late endosome to lysosome transport","type":"narrow"},{"name":"up regulation of late endosome to lysosome transport","type":"exact"},{"name":"up-regulation of late endosome to lysosome transport","type":"exact"},{"name":"upregulation of late endosome to lysosome transport","type":"exact"}],"termid":"GO:1902824"}


id: PBO:0063640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A3","termid":"PBO:0063640"}


id: GO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures of a host cell.","definition_xrefs":["GOC:jl","PMID:20463076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periphery","termid":"GO:0044538"}


id: GO:0102060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (-)-endo-alpha-bergamotene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:30471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"endo-alpha-bergamotene synthase activity","secondary_identifiers":["MetaCyc:RXN-10482","EC:4.2.3.54"],"synonyms":[{"name":"endo-alpha-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102060"}


id: PBO:0015228
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CET1","termid":"PBO:0015228"}


id: GO:0060495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in lung development","synonyms":[{"name":"cell-cell signalling involved in lung development","type":"exact"}],"termid":"GO:0060495"}


id: PBO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD180 molecule","termid":"PBO:0042370"}


id: FYPO:0006882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear envelope is imperforate (i.e. has no openings in the membranes, like wild type).","definition_xrefs":["PomBase:mah","PMID:30975915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"},{"relation_name":"part_of","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"imperforate nuclear envelope","synonyms":[{"name":"continuous nuclear envelope","type":"related"},{"name":"imperforate nuclear envelope during mitotic cell cycle","type":"exact"},{"name":"imperforate nuclear envelope during vegetative growth","type":"exact"},{"name":"imperforate nuclear membrane","type":"narrow"},{"name":"normal nuclear integrity","type":"related"},{"name":"unperforated nuclear envelope","type":"exact"}],"termid":"FYPO:0006882"}


id: PBO:0090076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1-like","termid":"PBO:0090076"}


id: PBO:0016982
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 Auxiliary Factor","termid":"PBO:0016982"}


id: GO:0141078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a RIG-I signaling pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19936053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host receptor-mediated signal transduction","termid":"GO:0075111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host RIG-I signaling pathway","synonyms":[{"name":"disruption of host RIG-1 signaling pathway","type":"exact"},{"name":"disruption of host RIG-I signaling pathway","type":"exact"}],"termid":"GO:0141078"}


id: PBO:0073890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 6","termid":"PBO:0073890"}


id: PBO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16 small nucleolar RNA","termid":"PBO:0004486"}


id: PR:Q10486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17C9.15c gene.","definition_xrefs":["UniProtKB:Q10486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.15c","synonyms":[{"name":"Spom972h-SPAC17C9.15c","type":"exact"}],"termid":"PR:Q10486"}


id: PR:Q10092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3104 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3104 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.13","synonyms":[{"name":"Spom972h-hsp3104","type":"exact"},{"name":"glyoxalase 3 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10092"}


id: PBO:0041241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 109","termid":"PBO:0041241"}


id: GO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosteroid hormone stimulus. A corticosteroid is a steroid hormone that is produced in the adrenal cortex. Corticosteroids are involved in a wide range of physiologic systems such as stress response, immune response and regulation of inflammation, carbohydrate metabolism, protein catabolism, blood electrolyte levels, and behavior. They include glucocorticoids and mineralocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosteroid","termid":"GO:0031960"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}


id: PBO:0043595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXV alpha 1 chain","termid":"PBO:0043595"}


id: GO:1905902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rph","PMID:23939491","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm formation","termid":"GO:1905902"}


id: PBO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine","termid":"PBO:0003703"}


id: GO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a chitin-containing cuticle to the epithelium underlying it. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040005"}


id: GO:0071854
data:
  {"annotated_genes":["SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97678,87949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways that result in the breakdown of macromolecules that form part of a cell wall, and contributes to the breakdown of the fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process involved in cell wall disassembly","termid":"GO:0070910"},{"relation_name":"part_of","term_name":"fungal-type cell wall disassembly","termid":"GO:0071853"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process involved in fungal-type cell wall disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071854","terms_by_termid":{"GO:0034232":null}}


id: PBO:0056489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC associated factor X","termid":"PBO:0056489"}


id: PBO:0038521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 3","termid":"PBO:0038521"}


id: GO:1901621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"negatively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"down regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"inhibition of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"negative regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"negative regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"negative regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901621"}


id: FYPO:0001075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on papulacandin B","synonyms":[{"name":"normal cell population growth in presence of papulacandin B","type":"exact"},{"name":"normal cell population growth on papulacandin B","type":"exact"},{"name":"normal cellular response to papulacandin B","type":"related"},{"name":"normal vegetative cell population growth on papulacandin B","type":"exact"}],"termid":"FYPO:0001075"}


id: PBO:0040230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 2","termid":"PBO:0040230"}


id: GO:0043818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + precorrin-3A = H2O + NAD+ + precorrin-3B.","definition_xrefs":["EC:1.14.13.83","RHEA:17293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"precorrin-3B synthase activity","secondary_identifiers":["MetaCyc:R321-RXN","KEGG_REACTION:R05217"],"synonyms":[{"name":"CobG","type":"related"},{"name":"precorrin-3A,NADH:oxygen oxidoreductase (20-hydroxylating)","type":"exact"},{"name":"precorrin-3X synthase activity","type":"related"}],"termid":"GO:0043818"}


id: GO:0097298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the nucleus.","definition_xrefs":["GOC:mah","PMID:19366728","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus size","synonyms":[{"name":"regulation of nuclear size","type":"exact"},{"name":"regulation of nuclear volume","type":"exact"}],"termid":"GO:0097298"}


id: GO:0009766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. In the photosynthetic reaction centers, primary charge separation is initiated by the excitation of a molecule followed by the transfer of an electron to an electron acceptor molecule following energy transfer from light harvesting complexes.","definition_xrefs":["ISBN:0792361431"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation (obsolete GO:0009766)","termid":"GO:0009766"}


id: PR:O94328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbl1 gene.","definition_xrefs":["UniProtKB:O94328","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 118 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.12","synonyms":[{"name":"Spom972h-nbl1","type":"exact"}],"termid":"PR:O94328"}


id: GO:2001176
data:
  {"annotated_genes":["SJAG_03421","SJAG_00973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84447,101858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001176","terms_by_termid":{"GO:2001178":null}}


id: FYPO:0004374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cytoplasm is abolished when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm during glucose starvation","synonyms":[{"name":"abolished protein localisation to cytoplasm during glucose starvation","type":"exact"},{"name":"abolished protein localization to cytoplasm during glucose depletion","type":"exact"},{"name":"abolished protein localization to cytoplasm during glucose deprivation","type":"exact"},{"name":"abolished protein localization to cytoplasm during glucose limitation","type":"related"},{"name":"protein localization to cytoplasm abolished during glucose starvation","type":"exact"}],"termid":"FYPO:0004374"}


id: PBO:0027471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sanglifehrin_A_binding","termid":"PBO:0027471"}


id: GO:0033654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any sac-like membranous structures (cisternae) in a chloroplast found in host cells, combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell chloroplast part","termid":"GO:0033653"},{"relation_name":"is_a","term_name":"host thylakoid membrane","termid":"GO:0044160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast thylakoid membrane","termid":"GO:0033654"}


id: PBO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd2","termid":"PBO:0002443"}


id: GO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","GOC:pr","PMID:12752675","PMID:12960266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil homeostasis","termid":"GO:0001780"}


id: GO:1990515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference where the silencing signal spreads 3' along the target mRNA, outside of the initial target sequence. Typically involves the formation of secondary siRNAs formed when the initial mRNA target sequence functions as a template for 5' to 3' synthesis of new dsRNA.","definition_xrefs":["GOC:pf","PMID:24369430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitive RNA interference","termid":"GO:0036453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"3' transitive RNA interference","termid":"GO:1990515"}


id: PBO:0049999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone cell cycle regulator","termid":"PBO:0049999"}


id: PBO:0086433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; YCR007C is not an essential gene","termid":"PBO:0086433"}


id: PBO:0046707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETV5 antisense RNA 1","termid":"PBO:0046707"}


id: GO:1901123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bacitracin A.","definition_xrefs":["GOC:yaf","UniPathway:UPA00179","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacitracin A metabolic process","termid":"GO:1901122"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A catabolic process","synonyms":[{"name":"bacitracin A breakdown","type":"exact"},{"name":"bacitracin A catabolism","type":"exact"},{"name":"bacitracin A degradation","type":"exact"}],"termid":"GO:1901123"}


id: PBO:0069667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 944, pseudogene","termid":"PBO:0069667"}


id: PBO:0034801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex, CUE domain protein Cue1 (predicted)","termid":"PBO:0034801"}


id: PBO:0053141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6C, pseudogene","termid":"PBO:0053141"}


id: PBO:0086610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086610"}


id: PBO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing Dbl1, implicated in DNA repair","termid":"PBO:0110072"}


id: GO:0030364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor required in mRNA 3' end processing for both the cleavage and poly(A) addition reactions and, consistent with this function, recognizes AAUAAA, a signal also essential for both reactions.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage and polyadenylylation specificity factor activity (obsolete GO:0030364)","synonyms":[{"name":"CPSF","type":"exact"},{"name":"cleavage and polyadenylation specificity factor activity","type":"exact"},{"name":"cleavage and polyadenylylation specificity factor activity","type":"exact"},{"name":"cleavage/polyadenylation specificity factor activity","type":"exact"}],"termid":"GO:0030364"}


id: PBO:0091566
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Related Protein","termid":"PBO:0091566"}


id: PR:O74750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-xylose and UDP-N-acetylglucosamine transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02706","PANTHER:PTHR10778:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transporter yea4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.09","secondary_identifiers":["UniProtKB:O74750"],"synonyms":[{"name":"Spom972h-SLC35B4","type":"exact"}],"termid":"PR:O74750"}


id: PBO:0062610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily T member 1 pseudogene","termid":"PBO:0062610"}


id: PBO:0073733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A2 antisense RNA 1","termid":"PBO:0073733"}


id: MOD:00484
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:112#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized lysine biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxLysBiotinRed","type":"related"},{"name":"Oxidized lysine biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00484"}


id: GO:0034685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta6 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alphav-beta6 complex","synonyms":[{"name":"ITGAV-ITGB6 complex","type":"narrow"},{"name":"alphav-beta6 integrin complex","type":"exact"}],"termid":"GO:0034685"}


id: PATO:0001475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased position","synonyms":[{"name":"high position","type":"related"}],"termid":"PATO:0001475"}


id: PBO:0086687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0086687"}


id: PBO:0058857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8086","termid":"PBO:0058857"}


id: RO:HOM0000000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between biological objects that resemble or are related to each other sufficiently to warrant a comparison.","definition_xrefs":["BGEE:curator"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_similarity_relationship_with","synonyms":[{"name":"correspondence","type":"related"},{"name":"resemblance","type":"related"},{"name":"sameness","type":"exact"},{"name":"similar to","type":"exact"}],"termid":"RO:HOM0000000"}


id: GO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become trophectoderm cells.","definition_xrefs":["GOC:dph","ISBN:0124020607","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell fate commitment","synonyms":[{"name":"trophectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001830"}


id: PBO:0066504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X2","termid":"PBO:0066504"}


id: PBO:0050367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 70","termid":"PBO:0050367"}


id: GO:0033429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"CGU codon-amino acid adaptor activity","synonyms":[{"name":"CGT codon-amino acid adaptor activity","type":"exact"},{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033429"}


id: GO:0072476
data:
  {"annotated_genes":["SJAG_01805","SJAG_03048","SJAG_00082","SJAG_04140","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86209,89991,98553,107382,112842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[86214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to spindle checkpoint signaling","termid":"GO:0072417"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic cell cycle spindle checkpoint effector process","type":"exact"},{"name":"response to mitotic cell cycle spindle checkpoint signaling","type":"exact"},{"name":"response to signal involved in mitotic cell cycle spindle checkpoint","type":"exact"}],"termid":"GO:0072476","terms_by_termid":{"GO:0072479":null,"GO:0140429":null}}


id: PBO:0059151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 3","termid":"PBO:0059151"}


id: PBO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 1","termid":"PBO:0005412"}


id: PBO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1522","termid":"PBO:0052324"}


id: PBO:0027768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_mitotic_spindle_during_anaphase","termid":"PBO:0027768"}


id: PBO:0076439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 12","termid":"PBO:0076439"}


id: PBO:0047815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 antisense RNA 1","termid":"PBO:0047815"}


id: PATO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decreased size quality inhering in a bearer by virtue of the bearer's exhibiting reduced size of a cell or constituent group of cells (for example, organ).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased volume","termid":"PATO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrophic","secondary_identifiers":["PATO:0000412"],"synonyms":[{"name":"shrunken","type":"exact"}],"termid":"PATO:0000585"}


id: PBO:0078427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 4-1","termid":"PBO:0078427"}


id: PBO:0059389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S24","termid":"PBO:0059389"}


id: GO:0005778
data:
  {"annotated_genes":["SJAG_03440","SJAG_02619","SJAG_03324","SJAG_00891","SJAG_00702","SJAG_03493","SJAG_04763","SJAG_04315","SJAG_01685","SJAG_01854","SJAG_02693","SJAG_02997","SJAG_03464","SJAG_03781","SJAG_01165","SJAG_04146","SJAG_03715","SJAG_00974","SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62849,84440,86432,86627,91608,93136,97470,98674,99266,101405,102861,107417,107568,108032,111064,111915,113397,113447,114290],"is_not":false,"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a peroxisome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody membrane","termid":"GO:0031903"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_00974":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_01854":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"peroxisomal membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome membrane","type":"exact"}],"termid":"GO:0005778","terms_by_termid":{"GO:0005778":null}}


id: GO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate or quinate ester of p-coumaric acid + NADPH + H+ + O2 = caffeic acid conjugate (caffeoyl shikimic acid or chlorogenic acid) + H2O + NADP+.","definition_xrefs":["PMID:11429408","PMID:11891223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"p-coumarate 3-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP98A3","type":"narrow"}],"termid":"GO:0046409"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_01346","SJAG_04192","SJAG_00839","SJAG_02648","SJAG_01455","SJAG_03614","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[99822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[104570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[99678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[85158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[103182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[112519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.3.1.-"],"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: GO:0097684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The anterior most point of a dinoflagellate hypocone.","definition_xrefs":["GOC:at","ISBN:0632009152","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dinoflagellate hypocone","termid":"GO:0097614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate antapex","synonyms":[{"name":"antapex","type":"broad"}],"termid":"GO:0097684"}


id: MOD:01699
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a hydrogen cation, a proton, forming a cationic residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated residue","synonyms":[{"name":"H+NRes","type":"exact"}],"termid":"MOD:01699"}


id: GO:0016300
data:
  {"annotated_genes":["SJAG_02042","SJAG_03367","SJAG_04736"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[94256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[114099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a uracil residue in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02042":null,"SJAG_03367":null,"SJAG_04736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0016741","GO:0003824","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"tRNA (uridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016431"],"synonyms":[{"name":"tRNA (uracil) methyltransferase activity","type":"exact"}],"termid":"GO:0016300","terms_by_termid":{"GO:0030697":null,"GO:0106335":null,"GO:0141101":null}}


id: PBO:0058825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8055","termid":"PBO:0058825"}


id: PBO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L41 (predicted)","termid":"PBO:0001771"}


id: GO:0106091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating an elongation or projection from a glial cell.","definition_xrefs":["GOC:ha","PMID:27131624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"glial cell development","termid":"GO:0021782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell projection elongation","termid":"GO:0106091"}


id: GO:0034505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts are deposited into calcareous tooth structures such as dental enamel, dentin and cementum.","definition_xrefs":["MP:0002817","MSH:D014074","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"},{"relation_name":"part_of","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth mineralization","synonyms":[{"name":"tooth calcification","type":"exact"}],"termid":"GO:0034505"}


id: PBO:0030202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multiseptate_vegetative_cell","termid":"PBO:0030202"}


id: PR:Q10443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nod1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.10","synonyms":[{"name":"Spom972h-nod1","type":"exact"}],"termid":"PR:Q10443"}


id: GO:0160161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of propanediol catabolic process.","definition_xrefs":["PMID:7559322","PMID:9023178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"propanediol catabolic process","termid":"GO:0051144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of propanediol catabolic process","termid":"GO:0160161"}


id: PR:Q9P5N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell-type specific agglutination protein C359.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.04c","synonyms":[{"name":"Spom972h-pfl7","type":"exact"}],"termid":"PR:Q9P5N1"}


id: PBO:0055084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2502","termid":"PBO:0055084"}


id: PBO:0042776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 85 like","termid":"PBO:0042776"}


id: GO:0140022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A giant secretory organelle that comprises a bulb-shape capsule containing a coiled hollow tubule structure attached to it. A cnida defines the phylum Cnidaria.","definition_xrefs":["Wikipedia:Cnida#Structure_and_function"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cnida","synonyms":[{"name":"cnidae (plural)","type":"exact"}],"termid":"GO:0140022"}


id: PBO:0065716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pvt1 oncogene","termid":"PBO:0065716"}


id: FYPO:0006184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to osmotic stress measured in a cell differs from normal (i.e. is higher or lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered level of osmotic stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"abnormal level of osmotic stress responsive gene mRNA during vegetative growth","type":"exact"},{"name":"altered level of cellular response to osmotic stress responsive gene mRNA","type":"exact"},{"name":"altered level of osmotic stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"altered level of osmotic stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"altered level of osmotic stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"altered mRNA level of osmotic stress responsive genes during vegetative growth","type":"exact"},{"name":"altered osmotic stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006184"}


id: PBO:0073505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 1A","termid":"PBO:0073505"}


id: SO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_translocation","synonyms":[{"name":"transcript translocation","type":"exact"}],"termid":"SO:0001883"}


id: PBO:0039183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 13","termid":"PBO:0039183"}


id: PBO:0054137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1503","termid":"PBO:0054137"}


id: PR:O74504
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC594.01 gene.","definition_xrefs":["UniProtKB:O74504","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0590 protein C594.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.01","synonyms":[{"name":"Spom972h-SPCC594.01","type":"exact"}],"termid":"PR:O74504"}


id: PBO:0067838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 140","termid":"PBO:0067838"}


id: GO:0061534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gamma-aminobutyric acid by a cell, in which the gamma-aminobutyric acid acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"},{"relation_name":"part_of","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid secretion, neurotransmission","termid":"GO:0061534"}


id: GO:0021667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 6 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 6 development","termid":"GO:0021572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}


id: PBO:0070824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 2","termid":"PBO:0070824"}


id: PR:C6Y4C4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sdh8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.16","synonyms":[{"name":"SDH assembly factor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sdh8","type":"exact"}],"termid":"PR:C6Y4C4"}


id: MOD:00331
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a three-iron four-sulfur cluster to tetrakis-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["PubMed:11592901","PubMed:11941493","PubMed:2511202","RESID:AA0326","PubMed:6094558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrakis-L-cysteinyl triiron tetrasulfide","synonyms":[{"name":"bis[bis-L-cysteinyl iron disulfido]iron","type":"exact"},{"name":"di-mu-1:2kappaS-sulfido di-mu-2:3kappaS-sulfido iron bis(bis-S-cysteinyliron)","type":"exact"},{"name":"tetra-mu-sulfido tetrakis-S-L-cysteinyl triiron","type":"exact"},{"name":"tetrakis-L-cysteinyl linear [3Fe-4S] cluster","type":"exact"},{"name":"tetrakis-L-cysteinyl triiron tetrasulfide","type":"exact"},{"name":"tetrakis-L-cysteinyl triiron tetrasulfide D2 cluster","type":"exact"}],"termid":"MOD:00331"}


id: PBO:0087569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; involved in transcription initiation, required for nucleotide excision repair; ring finger protein similar to mammalian CAK and TFIIH subunit","termid":"PBO:0087569"}


id: GO:0043554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of arsenite to arsenate, using oxygen (O2) as the electron acceptor. Arsenite oxidase provides electrons to an electron carrier which transfers them to oxygen utilizing respiratory systems.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using arsenite as electron donor","termid":"GO:0043554"}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: GO:0018866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving adamantanone, tricyclo(3.3.1.13,7)decanone, a white crystalline solid used as an intermediate for microelectronics in the production of photoresists.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"adamantanone metabolic process","secondary_identifiers":["UM-BBD_pathwayID:ada"],"synonyms":[{"name":"adamantanone metabolism","type":"exact"}],"termid":"GO:0018866"}


id: PBO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase (predicted)","termid":"PBO:0002523"}


id: PBO:0054219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1600","termid":"PBO:0054219"}


id: PBO:0050073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMBOX1 intronic transcript 1","termid":"PBO:0050073"}


id: GO:0052238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052238)","synonyms":[{"name":"aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052238"}


id: SO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that can be recognized by both Fizzy/Cdc20- and FZR/Cdh1-activated anaphase-promoting complex/cyclosome (APC/C) and targets a protein for ubiquitination and subsequent degradation by the APC/C. The consensus sequence is RXXLXXXXN.","definition_xrefs":["PMID:1842691","PMID:12208841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"destruction_box","synonyms":[{"name":"D-box","type":"exact"},{"name":"destruction box","type":"exact"}],"termid":"SO:0001805"}


id: FYPO:0006251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is decreased. All tRNAs aminoacylation may be decreased, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["PomBase:mah","GO:0006418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA aminoacylation","termid":"FYPO:0006250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"decreased tRNA aminoacylation","synonyms":[{"name":"decreased tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"decreased tRNA aminoacylation for protein translation","type":"exact"},{"name":"decreased tRNA charging","type":"narrow"},{"name":"reduced tRNA aminoacylation","type":"exact"}],"termid":"FYPO:0006251"}


id: PBO:0083334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the characterized ORF BDF1/YLR399C","termid":"PBO:0083334"}


id: GO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"negatively_regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of post-transcriptional gene silencing","synonyms":[{"name":"negative regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060149"}


id: PBO:0082470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-dependent protein kinase; may play a role in stress response, many Ca++/calmodulin dependent phosphorylation substrates demonstrated in vitro, amino acid sequence similar to mammalian Cam Kinase II; CMK1 has a paralog, CMK2, that arose from the whole genome duplication","termid":"PBO:0082470"}


id: GO:0043580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the periplasmic space, the region between the inner (cytoplasmic) and outer membrane in Gram-negative bacteria, or the inner membrane and cell wall in fungi.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periplasmic space organization","synonyms":[{"name":"periplasmic space organisation","type":"exact"},{"name":"periplasmic space organization and biogenesis","type":"exact"}],"termid":"GO:0043580"}


id: PBO:0036161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule_polymerization","termid":"PBO:0036161"}


id: PBO:0029982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_vegetative_cell","termid":"PBO:0029982"}


id: PBO:0061791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 2 pseudogene 1","termid":"PBO:0061791"}


id: GO:0047686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aryl sulfate + a phenol = a phenol + an aryl sulfate.","definition_xrefs":["MetaCyc:ARYLSULFATE-SULFOTRANSFERASE-RXN","EC:2.8.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"arylsulfate sulfotransferase activity","secondary_identifiers":["RHEA:51072"],"synonyms":[{"name":"ASST","type":"related"},{"name":"arylsulfate-phenol sulfotransferase activity","type":"related"},{"name":"arylsulfate:phenol sulfotransferase activity","type":"related"},{"name":"arylsulfotransferase","type":"broad"},{"name":"arylsulphate sulphotransferase activity","type":"exact"}],"termid":"GO:0047686"}


id: GO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.","definition_xrefs":["GOC:add","PMID:26086132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immunity memory response","termid":"GO:0090714"}


id: GO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage (obsolete GO:0006379)","synonyms":[{"name":"cleavage stimulation factor activity","type":"related"}],"termid":"GO:0006379"}


id: PBO:0068411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 2","termid":"PBO:0068411"}


id: PBO:0079476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twisted gastrulation BMP signaling modulator 1","termid":"PBO:0079476"}


id: GO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["PMID:11163136","PMID:11250167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division","synonyms":[{"name":"neuroblast cell division","type":"exact"}],"termid":"GO:0055057"}


id: PBO:0089615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport protein Avl9","termid":"PBO:0089615"}


id: GO:1905325
data:
  {"annotated_genes":["SJAG_03327","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97499],"is_not":false,"summary":null,"term":"GO:1905325"},{"annotations":[109971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the meiosis I spindle assembly checkpoint.","definition_xrefs":["PMID:26483559","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiosis I","termid":"GO:0060631"},{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"meiosis I spindle assembly checkpoint signaling","termid":"GO:1905318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"regulation of meiosis I spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905325","terms_by_termid":{"GO:1905325":null,"GO:1905326":null}}


id: GO:0102802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thebaine + 2-oxoglutarate + O2 = neopinone + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.31","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"thebaine 6-O-demethylase activity","secondary_identifiers":["RHEA:27477","MetaCyc:RXN-8147"],"termid":"GO:0102802"}


id: PATO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001087 relative efficiency value (obsolete PATO:0001087)","termid":"PATO:0001087"}


id: FYPO:0002833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of polyuridylation-dependent decapping of nuclear-transcribed mRNA is decreased. All RNA decapping may be decreased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased polyuridylation-dependent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"decreased poly(U)-dependent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"decreased polyuridylation-dependent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"decreased polyuridylation-dependent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"},{"name":"decreased uridylation-dependent decapping of nuclear-transcribed mRNA","type":"broad"},{"name":"reduced polyuridylation-dependent decapping of nuclear-transcribed mRNA","type":"exact"}],"termid":"FYPO:0002833"}


id: GO:0050300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 6-phosphate.","definition_xrefs":["RHEA:22268","EC:2.7.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"aminoglycoside 6-kinase activity","secondary_identifiers":["MetaCyc:STREPTOMYCIN-6-KINASE-RXN","KEGG_REACTION:R02225"],"synonyms":[{"name":"APH(6) activity","type":"related"},{"name":"ATP:streptomycin 6-phosphotransferase activity","type":"narrow"},{"name":"SM 6-kinase activity","type":"narrow"},{"name":"streptidine kinase (phosphorylating)","type":"narrow"},{"name":"streptidine kinase activity","type":"narrow"},{"name":"streptomycin 6-O-phosphotransferase activity","type":"narrow"},{"name":"streptomycin 6-kinase (phosphorylating)","type":"narrow"},{"name":"streptomycin 6-kinase activity","type":"narrow"},{"name":"streptomycin 6-phosphotransferase activity","type":"narrow"}],"termid":"GO:0050300"}


id: PBO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.23","termid":"PBO:0001671"}


id: GO:0097623
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108526],"is_not":false,"summary":null,"term":"GO:0097623"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:11932440","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"potassium ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098668","GO:0071435"],"synonyms":[{"name":"potassium export","type":"broad"},{"name":"potassium export across plasma membrane","type":"exact"},{"name":"potassium ion export","type":"broad"},{"name":"potassium ion export from cell","type":"exact"}],"termid":"GO:0097623","terms_by_termid":{"GO:0097623":null}}


id: PBO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA acetyltransferase (predicted)","termid":"PBO:0004432"}


id: FYPO:0006921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of gene conversion at replication fork barriers is decreased.","definition_xrefs":["PMID:28586299","PMID:31149897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gene conversion during vegetative growth","termid":"FYPO:0000185"},{"relation_name":"is_a","term_name":"decreased DNA recombination at mitotic DNA replication fork barriers","termid":"FYPO:0006920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased gene conversion at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased gene conversion at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased gene conversion at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"reduced gene conversion at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006921"}


id: PBO:0043809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 1","termid":"PBO:0043809"}


id: PBO:0065097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit alpha","termid":"PBO:0065097"}


id: PBO:0029280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0029280"}


id: PBO:0034175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_causally_downstream_of","termid":"PBO:0034175"}


id: GO:0034364
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process.","definition_xrefs":["GOC:pde","GOC:BHF","GOC:mah","GOC:rl","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"high-density lipoprotein particle","synonyms":[{"name":"HDL complex","type":"exact"},{"name":"HDL particle","type":"exact"},{"name":"HDL2","type":"related"},{"name":"HDL3","type":"related"},{"name":"high-density lipoprotein class complex","type":"exact"}],"termid":"GO:0034364"}


id: GO:0030173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi membrane (obsolete GO:0030173)","synonyms":[{"name":"Golgi integral membrane protein","type":"related"},{"name":"integral to Golgi membrane","type":"narrow"}],"termid":"GO:0030173"}


id: GO:2000273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signaling receptor activity","synonyms":[{"name":"positive regulation of signalling receptor activity","type":"exact"}],"termid":"GO:2000273"}


id: MOD:00994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-bromo-L-tyrosine","termid":"MOD:01025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3'-bromotyrosine","termid":"MOD:00994"}


id: PBO:0090745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC28E12.04 ortholog, syntenic position","termid":"PBO:0090745"}


id: GO:0021689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar molecular layer. This process pertains to the physical shaping of a rudimentary structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:dgh","GOC:jid","ISBN:0838580343","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer structural organization","synonyms":[{"name":"cerebellar molecular layer structural organisation","type":"exact"}],"termid":"GO:0021689"}


id: PBO:0078016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 6","termid":"PBO:0078016"}


id: PBO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr5","termid":"PBO:0002601"}


id: PBO:0064451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POF1B actin binding protein","termid":"PBO:0064451"}


id: PBO:0060820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 1 pseudogene 1","termid":"PBO:0060820"}


id: PBO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 5","termid":"PBO:0071758"}


id: SO:0001031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Reverse is an attribute of the feature, where the feature is in the 3' to 5' direction. Again could be applied to primer.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction_attribute","termid":"SO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse","termid":"SO:0001031"}


id: PBO:0028428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_pyridoxine","termid":"PBO:0028428"}


id: GO:0060824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the formation of the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060824"}


id: PATO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile","termid":"PATO:0001362"}


id: PBO:0076973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 4","termid":"PBO:0076973"}


id: PBO:0041503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 76","termid":"PBO:0041503"}


id: GO:0008227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular amine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled amine receptor activity","synonyms":[{"name":"G-protein coupled amine receptor activity","type":"exact"},{"name":"amine receptor activity, G-protein coupled","type":"exact"},{"name":"biogenic amine receptor","type":"narrow"}],"termid":"GO:0008227"}


id: SO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an RNase P RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA_gene","termid":"SO:0002180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA_gene","synonyms":[{"name":"RNase P RNA gene","type":"exact"}],"termid":"SO:0001639"}


id: PBO:0028798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0028798"}


id: GO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons into, out of, within or between cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter activity (obsolete GO:0005489)","synonyms":[{"name":"Rieske iron-sulfur protein","type":"related"},{"name":"class I cytochrome c","type":"related"},{"name":"class II cytochrome c","type":"related"},{"name":"class III cytochrome c","type":"related"},{"name":"class IIa cytochrome c","type":"related"},{"name":"class IIb cytochrome c","type":"related"},{"name":"class IV cytochrome c","type":"related"},{"name":"cytochrome b","type":"related"},{"name":"cytochrome b5","type":"related"},{"name":"cytochrome c3 (tetraheme)","type":"related"},{"name":"cytochrome c554","type":"related"},{"name":"cytochrome c7 (triheme)","type":"related"},{"name":"cytochrome d","type":"related"},{"name":"diheme class I cytochrome c","type":"related"},{"name":"electron transfer carrier","type":"related"},{"name":"electron transporter activity","type":"exact"},{"name":"flavin-containing electron transporter","type":"related"},{"name":"flavodoxin","type":"related"},{"name":"high-molecular-weight cytochrome c (hexadecaheme)","type":"related"},{"name":"monoheme class I cytochrome c","type":"related"},{"name":"nonaheme cytochrome c","type":"related"},{"name":"respiratory chain cytochrome b6","type":"related"}],"termid":"GO:0005489"}


id: PBO:0064494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit G","termid":"PBO:0064494"}


id: PBO:0057645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1237","termid":"PBO:0057645"}


id: GO:1902994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["GO_REF:0000058","PMID:12042316","GOC:sjp","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipid efflux","synonyms":[{"name":"regulation of phospholipid export","type":"exact"}],"termid":"GO:1902994"}


id: PBO:0030490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_succinate_import","termid":"PBO:0030490"}


id: PBO:0063062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 2","termid":"PBO:0063062"}


id: GO:0060218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hematopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.","definition_xrefs":["PMID:15378083","GOC:bf","GOC:dph","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell differentiation","synonyms":[{"name":"haematopoietic stem cell differentiation","type":"exact"},{"name":"haemopoietic stem cell differentiation","type":"exact"},{"name":"hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:0060218"}


id: FYPO:0002060
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold 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id: PBO:0087884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087884"}


id: GO:0102879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-thujopsene + diphosphoric acid.","definition_xrefs":["RHEA:30375","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(+)-thujopsene synthase activity","secondary_identifiers":["EC:4.2.3.79","MetaCyc:RXN-8418"],"termid":"GO:0102879"}


id: PBO:0027769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_anaphase","termid":"PBO:0027769"}


id: GO:0042318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"penicillin biosynthetic process","synonyms":[{"name":"penicillin anabolism","type":"exact"},{"name":"penicillin biosynthesis","type":"exact"},{"name":"penicillin formation","type":"exact"},{"name":"penicillin synthesis","type":"exact"}],"termid":"GO:0042318"}


id: PBO:0061020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3","termid":"PBO:0061020"}


id: PBO:0047751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, alpha pseudogene 1","termid":"PBO:0047751"}


id: GO:0048463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the carpel. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"carpel morphogenesis","termid":"GO:0048445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel structural organization","secondary_identifiers":["GO:0048432"],"synonyms":[{"name":"carpel structural organisation","type":"exact"}],"termid":"GO:0048463"}


id: GO:1902508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of 2-iminoacetate synthase activity.","definition_xrefs":["GOC:bhm","PMID:12650933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"2-iminoacetate synthase complex","synonyms":[{"name":"ThiH-ThiG complex","type":"narrow"}],"termid":"GO:1902508"}


id: SO:0000930
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of guide RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"guide_RNA","termid":"SO:0000602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guide_RNA_region","synonyms":[{"name":"guide RNA region","type":"exact"}],"termid":"SO:0000930"}


id: GO:0008528
data:
  {"annotated_genes":["SJAG_01978","SJAG_01345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[84377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with a peptide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled peptide receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G protein coupled peptide receptor activity","type":"exact"},{"name":"G-protein coupled peptide receptor activity","type":"exact"},{"name":"peptide receptor activity, G protein coupled","type":"exact"},{"name":"peptide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0008528","terms_by_termid":{"GO:0004932":null,"GO:0036320":null}}


id: GO:2000805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of termination of RNA polymerase II transcription","termid":"GO:0120191"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:2000804"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"negative regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000805"}


id: FYPO:0008068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin silencing at silent mating-type cassette","termid":"FYPO:0004376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased spatial extent of chromatin silencing at silent mating-type cassette","termid":"FYPO:0008068"}


id: PBO:0055601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3037","termid":"PBO:0055601"}


id: GO:1905698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of polysome binding.","definition_xrefs":["GO_REF:0000059","PMID:18426977","GOC:bc","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of polysome binding (obsolete GO:1905698)","synonyms":[{"name":"activation of polyribosome binding","type":"narrow"},{"name":"activation of polysome binding","type":"narrow"},{"name":"positive regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polysome binding","type":"exact"},{"name":"up-regulation of polyribosome binding","type":"exact"},{"name":"up-regulation of polysome binding","type":"exact"},{"name":"upregulation of polyribosome binding","type":"exact"},{"name":"upregulation of polysome binding","type":"exact"}],"termid":"GO:1905698"}


id: PBO:0044920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 6","termid":"PBO:0044920"}


id: GO:0009917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a C-5 double bond in the B ring of a sterol.","definition_xrefs":["ISBN:0943088399"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol 5-alpha reductase activity (obsolete GO:0009917)","termid":"GO:0009917"}


id: FYPO:0004105
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115678],"is_not":false,"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[115662],"is_not":false,"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which polar cell growth does not occur. Cells grow without polarization, instead of growing only at the ends.","definition_xrefs":["PomBase:mah","PMID:8187760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"name":"abolished polar cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"synonyms":[{"name":"abolished polar vegetative cell growth","type":"exact"},{"name":"abolished polarized cell growth","type":"exact"},{"name":"abolished unidimensional cell growth","type":"exact"},{"name":"depolarized cell growth","type":"exact"}],"termid":"FYPO:0004105","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: FYPO:0004975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending behind a moving spindle pole body occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization behind moving spindle pole body","synonyms":[{"name":"decreased microtubule shrinkage behind moving spindle pole body","type":"related"},{"name":"decreased rate of backward-extending microtubule depolymerization","type":"exact"},{"name":"decreased rate of microtubule catastrophe behind moving spindle pole body","type":"related"},{"name":"decreased rate of microtubule depolymerisation behind moving spindle pole body","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving SPB","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during vegetative growth","type":"exact"},{"name":"increased microtubule stability behind moving spindle pole body","type":"related"},{"name":"increased stability of backwards-extending microtubules","type":"related"},{"name":"reduced rate of microtubule depolymerization behind moving spindle pole body","type":"exact"}],"termid":"FYPO:0004975"}


id: PR:P22774-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-1.","definition_xrefs":["PRO:DNx","UniProtKB:P22774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Long (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-1"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Long","type":"exact"},{"name":"heat shock 70 kDa protein, mitochondrial isoform Mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22774-1"}


id: FYPO:0007748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of spindle assembly during meiosis I is longer than normal. The total duration of spindle phases I (initial assembly and first stage of elongation) and II (in which elongation normally pauses, and which coincides with metaphase I) is increased due to prolongation of either or both phases.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"increased duration of spindle assembly during meiosis I","synonyms":[{"name":"increased duration of meiosis I spindle assembly","type":"exact"},{"name":"increased duration of meiosis I spindle formation","type":"exact"},{"name":"increased duration of meiotic spindle assembly during meiosis I","type":"exact"},{"name":"increased duration of meiotic spindle formation during meiosis I","type":"exact"},{"name":"increased duration of spindle assembly phase I and II during meiosis I","type":"exact"},{"name":"prolonged meiosis I spindle assembly","type":"exact"},{"name":"prolonged meiosis I spindle formation","type":"exact"},{"name":"prolonged meiosis I spindle formation phase I and II","type":"exact"},{"name":"prolonged meiosis I spindle phase I and II","type":"exact"},{"name":"prolonged meiotic spindle assembly during meiosis I","type":"exact"},{"name":"prolonged meiotic spindle formation during meiosis I","type":"exact"}],"termid":"FYPO:0007748"}


id: FYPO:0006175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is abnormal during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to centromere during mitotic metaphase","synonyms":[{"name":"abnormal protein localisation to centromere during mitotic metaphase","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to centromere during metaphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006175"}


id: PBO:0057147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 224","termid":"PBO:0057147"}


id: GO:0035853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a chromosome passenger complex; as a result, the complex is transported to, or maintained in, a specific location at the spindle midzone. A chromosome passenger complex is a protein complex that contains the BIR-domain-containing protein Survivin, Aurora B kinase, INCENP and Borealin, and coordinates various events based on its location to different structures during the course of mitosis. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:15296749","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chromosome passenger complex localization to spindle midzone","synonyms":[{"name":"CPC complex localization to spindle midzone","type":"exact"},{"name":"CPC localization to spindle midzone","type":"exact"},{"name":"chromosomal passenger complex localization to spindle midzone","type":"exact"},{"name":"chromosome passenger complex localisation to spindle midzone","type":"exact"},{"name":"chromosome passenger complex localization to central spindle","type":"exact"},{"name":"chromosome passenger complex localization to spindle equator","type":"exact"}],"termid":"GO:0035853"}


id: PBO:0081131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 zinc finger protein","termid":"PBO:0081131"}


id: PBO:0075005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-16","termid":"PBO:0075005"}


id: GO:0033119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"negatively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of RNA splicing","termid":"GO:0033119"}


id: FYPO:0004417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to phosphate starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to phosphate starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"normal RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during phosphate starvation","type":"exact"},{"name":"normal mRNA level during cellular response to phosphate starvation","type":"narrow"},{"name":"normal transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004417"}


id: PBO:0074917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 88A","termid":"PBO:0074917"}


id: PBO:0081116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 5","termid":"PBO:0081116"}


id: PBO:0029741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_cell_during_nitrogen_starvation","termid":"PBO:0029741"}


id: PBO:0042405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 16","termid":"PBO:0042405"}


id: PBO:0036134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036134"}


id: PBO:0062336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 75","termid":"PBO:0062336"}


id: PR:P87159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inhibitor nif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.04c","synonyms":[{"name":"Spom972h-nif1","type":"exact"},{"name":"nim1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87159"}


id: PBO:0089983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Sep1","termid":"PBO:0089983"}


id: GO:2000262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"},{"relation_name":"positively_regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of blood coagulation, common pathway","termid":"GO:2000262"}


id: PBO:0078042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 32","termid":"PBO:0078042"}


id: GO:0009562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an embryo sac nucleus to the pole or center of the cell.","definition_xrefs":["GOC:mtg_plant","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"embryo sac nuclear migration","synonyms":[{"name":"embryo sac nucleus migration","type":"exact"},{"name":"female gametophyte nuclear migration","type":"exact"},{"name":"female gametophyte nucleus migration","type":"exact"},{"name":"megagametophyte nuclear migration","type":"exact"},{"name":"megagametophyte nucleus migration","type":"exact"}],"termid":"GO:0009562"}


id: PBO:0077382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 123","termid":"PBO:0077382"}


id: GO:0071935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of octopamine to a receptor on the surface of the target cell that contributes to a response to a food stimulus.","definition_xrefs":["GOC:mah","PMID:19609300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine signaling pathway","termid":"GO:0071927"},{"relation_name":"part_of","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"octopamine signaling pathway involved in response to food","synonyms":[{"name":"octopamine signalling pathway involved in response to food","type":"exact"}],"termid":"GO:0071935"}


id: PBO:0003896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S21","termid":"PBO:0003896"}


id: PBO:0087035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L17A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; copurifies with the Dam1 complex (aka DASH complex); homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17A has a paralog, RPL17B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087035"}


id: PBO:0058547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6126","termid":"PBO:0058547"}


id: PBO:0068580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 31, pseudogene","termid":"PBO:0068580"}


id: PBO:0071051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 53","termid":"PBO:0071051"}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["PMID:24463506","GO_REF:0000068","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: PBO:0026934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_horsetail_movement","termid":"PBO:0026934"}


id: PBO:0079985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 23","termid":"PBO:0079985"}


id: GO:0002949
data:
  {"annotated_genes":["SJAG_02863","SJAG_04182","SJAG_06560","SJAG_00378","SJAG_04201","SJAG_00865","SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94460,95621,97303,100316,112482],"is_not":false,"summary":null,"term":"GO:0002949"},{"annotations":[110415,114740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["PMID:23258706","PMID:21183954","PMID:19287007","GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_00865":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070526"],"synonyms":[{"name":"t6A biosynthesis","type":"exact"},{"name":"t6A biosynthetic process","type":"exact"},{"name":"t6A tRNA modification","type":"exact"},{"name":"threonylcarbamoyladenosine anabolism","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthesis","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthetic process","type":"exact"},{"name":"threonylcarbamoyladenosine formation","type":"exact"},{"name":"threonylcarbamoyladenosine synthesis","type":"exact"}],"termid":"GO:0002949","terms_by_termid":{"GO:0002949":null,"GO:0072670":null}}


id: GO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate that oskar mRNAs are effectively translated into protein.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of oskar mRNA translation","synonyms":[{"name":"down regulation of oskar mRNA translation","type":"exact"},{"name":"down-regulation of oskar mRNA translation","type":"exact"},{"name":"downregulation of oskar mRNA translation","type":"exact"},{"name":"inhibition of oskar mRNA translation","type":"narrow"}],"termid":"GO:0007319"}


id: GO:0071244
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109686],"is_not":false,"summary":null,"term":"GO:0071244"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbon dioxide","termid":"GO:0010037"},{"relation_name":"is_a","term_name":"cellular response to inorganic substance","termid":"GO:0071241"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbon dioxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071244","terms_by_termid":{"GO:0071244":null}}


id: GO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which an oenocyte splits off of an existing epithelial sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"oenocyte delamination","termid":"GO:0060233"}


id: PBO:0091225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SODium","termid":"PBO:0091225"}


id: PBO:0059037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 25","termid":"PBO:0059037"}


id: FYPO:0004128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cysteine-type peptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal cysteine-type peptidase activity","synonyms":[{"name":"abnormal caspase activity","type":"narrow"},{"name":"abnormal cysteine protease activity","type":"exact"}],"termid":"FYPO:0004128"}


id: PBO:0049787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (gene/pseudogene)","termid":"PBO:0049787"}


id: GO:0002605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"negatively_regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002605"}


id: FYPO:0008040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in a cell is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-4,5-bisphosphate level","synonyms":[{"name":"increased phosphatidylinositol-4,5-bisphosphate level in cell","type":"exact"}],"termid":"FYPO:0008040"}


id: PBO:0047602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2A","termid":"PBO:0047602"}


id: PBO:0081539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 451","termid":"PBO:0081539"}


id: PBO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha1","termid":"PBO:0048197"}


id: PBO:0076301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic Ras GTPase activating protein 1","termid":"PBO:0076301"}


id: PBO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(19)(q13)","termid":"PBO:0047954"}


id: GO:1990742
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular vesicle released from the plasma membrane and ranging in size from about 100 nm to 1000 nm.","definition_xrefs":["GOC:vesicles","Wikipedia:Microvesicles","PMID:22418571","PMID:24009894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"microvesicle","synonyms":[{"name":"ectosome","type":"exact"},{"name":"extracellular microvesicle","type":"exact"},{"name":"shedding vesicle","type":"broad"}],"termid":"GO:1990742"}


id: PBO:0069948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1241, pseudogene","termid":"PBO:0069948"}


id: PBO:0042058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 121","termid":"PBO:0042058"}


id: FYPO:0004415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased phosphatase activity","termid":"FYPO:0004415"}


id: PBO:0057441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 558","termid":"PBO:0057441"}


id: PBO:0073279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14","termid":"PBO:0073279"}


id: PBO:0052377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20B","termid":"PBO:0052377"}


id: PBO:0004393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.3","termid":"PBO:0004393"}


id: GO:0033668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host apoptosis, leading to a decrease in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host programmed cell death","termid":"GO:0052041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host apoptosis","secondary_identifiers":["GO:0039650"],"synonyms":[{"name":"down regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"down-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"downregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"inhibition by organism of host apoptotic programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host apoptosis","type":"exact"},{"name":"negative regulation by symbiont of host apoptotic process","type":"exact"},{"name":"negative regulation by virus of host apoptosis","type":"narrow"},{"name":"suppression by symbiont of host apoptotic process","type":"exact"},{"name":"suppression by virus of host apoptosis","type":"narrow"}],"termid":"GO:0033668"}


id: PBO:0084953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; promotes ubiquitin-dependent proteolysis of Ira2p; regulated by G-alpha protein Gpa2p; GPB1 has a paralog, GPB2, that arose from the whole genome duplication","termid":"PBO:0084953"}


id: PBO:0031842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_morphology","termid":"PBO:0031842"}


id: GO:1990911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to aversive or demanding psychological and social conditions that tax or exceed the behavioral resources of the organism.","definition_xrefs":["PMID:22922217","PMID:26458179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to psychosocial stress","termid":"GO:1990911"}


id: PBO:0089586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex beta subunit Mas1","termid":"PBO:0089586"}


id: PBO:0069403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 663, pseudogene","termid":"PBO:0069403"}


id: SO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. ACAAAAACC), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_nonamer","synonyms":[{"name":"V nonamer","type":"exact"},{"name":"V-NONAMER","type":"exact"}],"termid":"SO:0000536"}


id: PBO:0108697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec74","termid":"PBO:0108697"}


id: PBO:0084336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate","termid":"PBO:0084336"}


id: GO:0061624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructose that results in the formation of dihydroxyacetone phosphate and glyceraldehyde-3-phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate","termid":"GO:0061624"}


id: GO:0141093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-6-(D-ribitylamino)uracil + L-tyrosine + S-adenosyl-L-methionine = 2-iminoacetate + 5'-deoxyadenosine + 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + H+ + L-methionine.","definition_xrefs":["PMID:25781338","RHEA:55200","PMID:23072415","PMID:11948155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase activity","secondary_identifiers":["MetaCyc:RXN-19229","EC:2.5.1.147"],"termid":"GO:0141093"}


id: GO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["PMID:20701995","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase binding","termid":"GO:0070063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"single-subunit type RNA polymerase binding","synonyms":[{"name":"SP6-type RNA polymerase binding","type":"exact"},{"name":"T3-type RNA polymerase binding","type":"exact"},{"name":"T3/T7 type RNA polymerase binding","type":"exact"},{"name":"T7-type RNA polymerase binding","type":"exact"}],"termid":"GO:0001050"}


id: PBO:0003908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga7","termid":"PBO:0003908"}


id: PBO:0084758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial membrane protein; coordinates expression of mitochondrially-encoded genes; may facilitate delivery of mRNA to membrane-bound translation machinery","termid":"PBO:0084758"}


id: PR:Q9Y7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C569.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.04","synonyms":[{"name":"Spom972h-SPCC569.04","type":"exact"}],"termid":"PR:Q9Y7S3"}


id: PBO:0040765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3","termid":"PBO:0040765"}


id: PBO:0049225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 6 pseudogene 1","termid":"PBO:0049225"}


id: PBO:0091663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Zas1","termid":"PBO:0091663"}


id: GO:0042820
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97037],"is_not":false,"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin B6 catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vitamin B6 breakdown","type":"exact"},{"name":"vitamin B6 catabolism","type":"exact"},{"name":"vitamin B6 degradation","type":"exact"}],"termid":"GO:0042820","terms_by_termid":{"GO:0042820":null}}


id: GO:0052257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction (obsolete GO:0052257)","synonyms":[{"name":"MAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"MAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor-dependent induction of innate immunity of other organism","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism during symbiotic interaction","type":"related"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052257"}


id: PBO:0038937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 5 (class III), chi polypeptide","termid":"PBO:0038937"}


id: PBO:0003621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane palmitoyltransferase Pfa5 (predicted)","termid":"PBO:0003621"}


id: FYPO:0007474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:vw","PMID:23333317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division","synonyms":[{"name":"increased variability of cell size in a vegetative population","type":"exact"},{"name":"variable cell size at division during mitotic cell cycle","type":"related"},{"name":"variable cell size at division during vegetative growth","type":"exact"},{"name":"variable cell size at division, with equal-sized daughter cell formation","type":"exact"},{"name":"variable vegetative cell size at division","type":"exact"}],"termid":"FYPO:0007474"}


id: FYPO:0008044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than four nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:10545452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002051"},{"relation_name":"is_a","term_name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell with more than four nuclei","termid":"FYPO:0008044"}


id: GO:0090049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"}


id: FYPO:0001327
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115225,115226,115227],"is_not":false,"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during vegetative growth","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000762"],"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation during vegetative growth","type":"related"},{"name":"increased protein level during mitotic cell cycle","type":"related"},{"name":"protein accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001327","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: GO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) -> ADP + phosphate + Na+(out), by a rotational mechanism.","definition_xrefs":["PMID:30791207","RHEA:58157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium-transporting ATPase activity, rotational mechanism","secondary_identifiers":["EC:7.2.2.1","MetaCyc:3.6.3.15-RXN","RHEA:58156"],"synonyms":[{"name":"ATP phosphohydrolase (Na+-transporting) activity","type":"related"},{"name":"ATP synthase, sodium ion specific activity","type":"related"},{"name":"Na(+)-translocating ATPase activity","type":"broad"},{"name":"Na(+)-transporting two-sector ATPase activity","type":"related"},{"name":"Na+-translocating ATPase activity","type":"related"},{"name":"Na+-translocating F1Fo-ATPase","type":"narrow"},{"name":"Na+-transporting two-sector ATPase","type":"narrow"},{"name":"sodium transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"sodium-translocating F-type ATPase activity","type":"narrow"},{"name":"sodium-translocating V-type ATPase activity","type":"narrow"},{"name":"sodium-transporting two-sector ATPase activity","type":"narrow"},{"name":"vacuolar-type Na+-ATPase","type":"narrow"},{"name":"vacuolar-type Na+-translocating ATPase","type":"narrow"}],"termid":"GO:0046962"}


id: GO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002603"}


id: FYECO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ leu","synonyms":[{"name":"leucine added","type":"exact"}],"termid":"FYECO:0000226"}


id: PBO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof5","termid":"PBO:0001702"}


id: PBO:0056785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 2","termid":"PBO:0056785"}


id: FYPO:0002217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable, elongated, and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved elongated vegetative cell population (obsolete FYPO:0002217)","synonyms":[{"name":"population of curved viable long cells","type":"exact"},{"name":"viable curved long vegetative cell population","type":"exact"}],"termid":"FYPO:0002217"}


id: PBO:0056236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 3","termid":"PBO:0056236"}


id: GO:0140323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(in) + solute(out) = anion(out) + solute(in).","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:monoatomic anion antiporter activity (obsolete GO:0140323)","synonyms":[{"name":"solute:anion antiporter activity","type":"exact"}],"termid":"GO:0140323"}


id: MOD:00089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoyl-L-serine.","definition_xrefs":["OMSSA:94","PubMed:3467339","Unimod:47#S","RESID:AA0080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoylated residue","termid":"MOD:00652"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-palmitoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(hexadecanoyloxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-palmitoyl serine intermediate","type":"exact"},{"name":"L-serine hexadecanoate ester","type":"exact"},{"name":"LIPID O-palmitoyl serine","type":"exact"},{"name":"O-hexadecanoylated L-serine","type":"exact"},{"name":"O-palmitoyl-L-serine","type":"exact"},{"name":"O-palmitoylated L-serine","type":"exact"},{"name":"O3-palmitoyl-serine","type":"exact"},{"name":"OPamSer","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"palmitoylations","type":"exact"},{"name":"serine palmitate ester","type":"exact"}],"termid":"MOD:00089"}


id: PBO:0065815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A, member RAS oncogene family","termid":"PBO:0065815"}


id: GO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in contraction of the apical end of a polarized columnar epithelial cell, contributing to formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.","definition_xrefs":["GOC:ha","PMID:28495958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical constriction involved in gastrulation","termid":"GO:0003384"},{"relation_name":"part_of","term_name":"ventral furrow formation","termid":"GO:0007370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}


id: GO:0052841
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101361,111222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[101362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: bisdiphospho-1D-myo-inositol tetrakisphosphate + H2O = diphospho-1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2023973","Reactome:R-HSA-1855165"],"termid":"GO:0052841","terms_by_termid":{"GO:0052846":null,"GO:0052847":null}}


id: SO:0001878
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that falls entirely or partially within a genomic feature.","definition_xrefs":["SO:ke","EBI:fc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_variant","synonyms":[{"name":"feature alteration","type":"exact"}],"termid":"SO:0001878"}


id: GO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via modification of peptidyl-cysteine to peptidyl-L-cysteine persulfide.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via cysteine modification to L-cysteine persulfide (obsolete GO:0018192)","synonyms":[{"name":"enzyme active site formation via L-cysteine persulphide","type":"exact"}],"termid":"GO:0018192"}


id: PBO:0029260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_leucine_import","termid":"PBO:0029260"}


id: PBO:0013073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4","termid":"PBO:0013073"}


id: PBO:0034407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptionally_regulates_(obsolete_transcriptionally_regulates)","termid":"PBO:0034407"}


id: PBO:0108943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 22","termid":"PBO:0108943"}


id: PBO:0066775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 73","termid":"PBO:0066775"}


id: PBO:0062970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 13","termid":"PBO:0062970"}


id: PBO:0058562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6504","termid":"PBO:0058562"}


id: GO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a multicellular organism grows in a threadlike, filamentous shape.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a multicellular organism","termid":"GO:0044181"}


id: PBO:0035843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aggregated_filamentous_actin_in_cytoplasm","termid":"PBO:0035843"}


id: PBO:0050106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 16","termid":"PBO:0050106"}


id: GO:0102969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-oxogeraniol + NADP = (6E)-8-oxogeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"10-oxogeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9370"],"termid":"GO:0102969"}


id: PBO:0031062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_septated_germ_tube","termid":"PBO:0031062"}


id: GO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"negatively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"negative regulation of stress fiber assembly","synonyms":[{"name":"down regulation of stress fiber formation","type":"related"},{"name":"down-regulation of stress fiber formation","type":"exact"},{"name":"downregulation of stress fiber formation","type":"related"},{"name":"inhibition of stress fiber formation","type":"narrow"},{"name":"negative regulation of stress fibre biosynthesis","type":"related"},{"name":"negative regulation of stress fibre formation","type":"related"}],"termid":"GO:0051497"}


id: GO:0006499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein myristoylation","termid":"GO:0018377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal protein myristoylation","termid":"GO:0006499"}


id: PBO:0046590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 32, envelope","termid":"PBO:0046590"}


id: PR:O14142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3G6.05 gene.","definition_xrefs":["UniProtKB:O14142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sym1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.05","synonyms":[{"name":"Spom972h-SPAC3G6.05","type":"exact"}],"termid":"PR:O14142"}


id: PBO:0044975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 15","termid":"PBO:0044975"}


id: PBO:0069866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1153, pseudogene","termid":"PBO:0069866"}


id: PBO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 6","termid":"PBO:0072068"}


id: GO:1902441
data:
  {"annotated_genes":["SJAG_04901","SJAG_03915","SJAG_02529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87480,93052,110118],"is_not":false,"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle pole body.","definition_xrefs":["PMID:20833892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle pole body organization","termid":"GO:1990395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0051179","GO:0007010"],"is_obsolete":false,"name":"protein localization to meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990945","GO:1990954"],"synonyms":[{"name":"establishment of protein localization to meiotic spindle pole body","type":"narrow"},{"name":"protein localisation in meiotic spindle pole body","type":"exact"},{"name":"protein localisation to meiotic spindle pole body","type":"exact"},{"name":"protein localization in meiotic spindle pole body","type":"exact"},{"name":"protein location to meiotic spindle pole body","type":"exact"}],"termid":"GO:1902441","terms_by_termid":{"GO:1902441":null}}


id: PBO:0056001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056001"}


id: PBO:0063801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA1 antisense RNA 1","termid":"PBO:0063801"}


id: PBO:0049663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 histone pseudogene 1","termid":"PBO:0049663"}


id: PBO:0068309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 11 pseudogene 2","termid":"PBO:0068309"}


id: GO:0034883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + 2 H+ + 2 e- = 1,4-dihydroisonicotinate.","definition_xrefs":["UM-BBD_reactionID:r1347"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate reductase activity (obsolete GO:0034883)","synonyms":[{"name":"isonicotinate reductase activity","type":"exact"}],"termid":"GO:0034883"}


id: PBO:0078222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 10-3","termid":"PBO:0078222"}


id: PATO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer exhibiting deterioration of its structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degeneration","termid":"PATO:0002037"}


id: GO:2000333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"negatively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood microparticle formation","synonyms":[{"name":"negative regulation of microparticle generation","type":"exact"},{"name":"negative regulation of microparticle release","type":"exact"}],"termid":"GO:2000333"}


id: PBO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_form_id","termid":"PBO:0006268"}


id: PBO:0071535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a","termid":"PBO:0071535"}


id: FYPO:0002807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing arsenate ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on arsenic","termid":"FYPO:0004368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on arsenate","synonyms":[{"name":"normal cell population growth in presence of arsenate","type":"exact"},{"name":"normal cell population growth on arsenate","type":"exact"},{"name":"normal cell population growth on arsenate ion","type":"exact"},{"name":"normal cellular response to arsenate","type":"related"},{"name":"normal growth on arsenate ions","type":"exact"},{"name":"normal vegetative cell population growth on arsenate","type":"exact"}],"termid":"FYPO:0002807"}


id: SO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region composed of 8-11bp which enables binding by the centromere binding factor 1(Cbf1p).","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_I","synonyms":[{"name":"CDEI","type":"exact"},{"name":"Centromere DNA Element I","type":"exact"}],"termid":"SO:0001493"}


id: PR:P36591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfr1 gene.","definition_xrefs":["UniProtKB:P36591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.08c","synonyms":[{"name":"Spom972h-dfr1","type":"exact"}],"termid":"PR:P36591"}


id: PBO:0040887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP8B antisense RNA 1","termid":"PBO:0040887"}


id: SO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby an exon is lost from the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_loss_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:exon_loss_variant","type":"exact"},{"name":"exon loss","type":"exact"},{"name":"snpEff:EXON_DELETED","type":"exact"}],"termid":"SO:0001572"}


id: PBO:0012293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired protein 1","termid":"PBO:0012293"}


id: GO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-guanidino-2-oxopentanoate + H+ = 4-guanidinobutanal + CO2.","definition_xrefs":["EC:4.1.1.75","RHEA:11340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-guanidino-2-oxopentanoate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03178","MetaCyc:4.1.1.75-RXN"],"synonyms":[{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase (4-guanidinobutanal-forming)","type":"related"},{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase activity","type":"related"},{"name":"2-oxo-5-guanidinopentanoate decarboxylase activity","type":"related"},{"name":"2-oxo-5-guanidinovalerate alpha-ketoarginine decarboxylase activity","type":"related"},{"name":"alpha-ketoarginine decarboxylase activity","type":"related"}],"termid":"GO:0047435"}


id: GO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydrouracil + H2O = 3-ureidopropionate.","definition_xrefs":["EC:3.5.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"dihydropyrimidinase activity","secondary_identifiers":["RHEA:16121","Reactome:R-HSA-73589","Reactome:R-HSA-73618","MetaCyc:DIHYDROPYRIMIDINASE-RXN"],"synonyms":[{"name":"5,6-dihydropyrimidine amidohydrolase activity","type":"related"},{"name":"D-hydantoinase activity","type":"related"},{"name":"hydantoin peptidase activity","type":"related"},{"name":"hydantoinase activity","type":"related"},{"name":"hydropyrimidine hydrase activity","type":"related"},{"name":"pyrimidine hydrase activity","type":"related"}],"termid":"GO:0004157"}


id: GO:2000402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"negatively_regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte migration","termid":"GO:2000402"}


id: GO:0017054
data:
  {"annotated_genes":["SJAG_03095","SJAG_00958"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86866,104677],"is_not":false,"summary":null,"term":"GO:0017054"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that can stably associate with TATA-binding protein on promoters, thereby preventing the assembly of transcription factors TFIIA and TFIIB and leading to repression of RNA polymerase II transcription. The two subunits, NC2alpha (Drap1) and NC2beta (Dr1), dimerize through histone fold domains of the H2A/H2B type present in the amino termini.","definition_xrefs":["PMID:15574413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00958":null,"SJAG_03095":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"negative cofactor 2 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017054","terms_by_termid":{"GO:0017054":null}}


id: PBO:0090141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit, ribosomal protein L7-like Rpl701","termid":"PBO:0090141"}


id: GO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular parietal epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"},{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell development","termid":"GO:0072016"},{"relation_name":"part_of","term_name":"mesonephric glomerular parietal epithelial cell differentiation","termid":"GO:0061253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular parietal epithelial cell development","termid":"GO:0061254"}


id: PBO:0081733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 664","termid":"PBO:0081733"}


id: MOD:01282
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:206#H","PubMed:15541752","PubMed:10825247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site H","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01282"}


id: GO:0006714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquiterpenoid metabolic process","synonyms":[{"name":"sesquiterpenoid metabolism","type":"exact"}],"termid":"GO:0006714"}


id: PBO:0060606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 2","termid":"PBO:0060606"}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: PBO:0075710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2D (pseudogene)","termid":"PBO:0075710"}


id: PBO:0051914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 binding protein 1","termid":"PBO:0051914"}


id: PBO:0084382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity Fe(II) transporter of the plasma membrane","termid":"PBO:0084382"}


id: RO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and the course takes from the source to the target.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_transport_path","termid":"RO:0002243"}


id: PBO:0047334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin like 1","termid":"PBO:0047334"}


id: GO:0022604
data:
  {"annotated_genes":["SJAG_02536","SJAG_00845","SJAG_02838","SJAG_02169","SJAG_04322","SJAG_03581","SJAG_00661","SJAG_00596","SJAG_04461","SJAG_00236","SJAG_00610","SJAG_00514","SJAG_00216","SJAG_03637","SJAG_02392","SJAG_01456","SJAG_03705","SJAG_04666","SJAG_03486","SJAG_00244","SJAG_01799","SJAG_00028","SJAG_02022","SJAG_04509","SJAG_04724","SJAG_00333","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92027,86071,90754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[84287,106946,95898,99664,103025,112644,114031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[100697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061246"},{"annotations":[86927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[103793,112749],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[96337,101523,89925,99877],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[111211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[115681,115680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[100701,90760,87329,96340,101526,91847,114906,109235],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[84134,88609,99020],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"synonyms":[{"name":"negative regulation of cell shape and cell size","type":"related"},{"name":"positive regulation of cell shape and cell size","type":"related"},{"name":"regulation of cell shape and cell size","type":"related"}],"termid":"GO:0022604","terms_by_termid":{"GO:0008360":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061246":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0083621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2 ubiquitin-conjugating enzyme; involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus","termid":"PBO:0083621"}


id: GO:0051559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phlobaphene metabolic process","termid":"GO:0051558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene biosynthetic process","termid":"GO:0051559"}


id: GO:0046135
data:
  {"annotated_genes":["SJAG_03771","SJAG_00957","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86858],"is_not":false,"summary":null,"term":"GO:0046135"},{"annotations":[104558,85409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside breakdown","type":"exact"},{"name":"pyrimidine nucleoside catabolism","type":"exact"},{"name":"pyrimidine nucleoside degradation","type":"exact"}],"termid":"GO:0046135","terms_by_termid":{"GO:0009972":null,"GO:0046135":null}}


id: GO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of antimonite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"antimonite transport","termid":"GO:0015699"}


id: PBO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8","termid":"PBO:0072014"}


id: PBO:0052147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP2 antisense RNA 1","termid":"PBO:0052147"}


id: SO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Crick strand is the strand whose 5'-end is on the long arm of the chromosome. Of note, the term 'minus strand' is typically based on a reference sequence where it's preferred for the minus strand to be the Crick strand, but might not be and 'minus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crick_strand","synonyms":[{"name":"Bottom strand","type":"exact"},{"name":"Crick strand","type":"exact"},{"name":"Minus strand","type":"broad"},{"name":"Reverse strand","type":"exact"}],"termid":"SO:0002263"}


id: GO:0090240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H4 acetylation (obsolete GO:0090240)","termid":"GO:0090240"}


id: PBO:0082410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bHLH protein with similarity to myc-family transcription factors; overexpression confers hyperfilamentous growth and suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant","termid":"PBO:0082410"}


id: GO:0003174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mitral valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve development","termid":"GO:0003171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitral valve development","termid":"GO:0003174"}


id: GO:0061205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the paramesonephric duct over time, from its formation to the mature structure. Mullerian ducts (or paramesonephric ducts) are paired ducts of the embryo that run down the lateral sides of the urogenital ridge and terminate at the mullerian eminence in the primitive urogenital sinus. In the female, they will develop to form the fallopian tubes, uterus, cervix, and the upper portion of the vagina; in the male, they are lost. These ducts are made of tissue of mesodermal origin.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paramesonephric duct development","synonyms":[{"name":"Mullerian duct development","type":"exact"}],"termid":"GO:0061205"}


id: PBO:0077173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 2","termid":"PBO:0077173"}


id: GO:0043237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin binding","termid":"GO:0043236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"laminin-1 binding","synonyms":[{"name":"laminin-111 binding","type":"exact"}],"termid":"GO:0043237"}


id: PBO:0044045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 2","termid":"PBO:0044045"}


id: GO:0043321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell degranulation","synonyms":[{"name":"regulation of NK cell degranulation","type":"exact"},{"name":"regulation of NK cell granule exocytosis","type":"exact"},{"name":"regulation of natural killer cell granule exocytosis","type":"exact"}],"termid":"GO:0043321"}


id: PATO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000450 low percentage (obsolete PATO:0000450)","termid":"PATO:0000450"}


id: PBO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 2 pseudogene 1","termid":"PBO:0046188"}


id: GO:0051182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a coenzyme into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A coenzyme is any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme transport (obsolete GO:0051182)","termid":"GO:0051182"}


id: PBO:0039734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOC4-APOC2 readthrough (NMD candidate)","termid":"PBO:0039734"}


id: PBO:0029893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_phleomycin","termid":"PBO:0029893"}


id: PBO:0088493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane trafficking protein, ER to Golgi Psg1","termid":"PBO:0088493"}


id: GO:0052315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["Wikipedia:Phytoalexin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytoalexin biosynthetic process","synonyms":[{"name":"phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052315"}


id: FYPO:0006888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type) when the cell is subject to iron ion starvation.","definition_xrefs":["PMID:29549126","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to plasma membrane","termid":"FYPO:0002674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to plasma membrane during iron starvation","synonyms":[{"name":"normal protein localisation to plasma membrane during iron starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron ion starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006888"}


id: PBO:0068355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138","termid":"PBO:0068355"}


id: PBO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 52","termid":"PBO:0071211"}


id: GO:0006671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytosphingosine, (2S,3S,4R)-2-aminooctadecane-1,3,4-triol, a constituent of many plant sphingolipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"phytosphingosine metabolic process","synonyms":[{"name":"phytosphingosine metabolism","type":"exact"}],"termid":"GO:0006671"}


id: GO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of pseudohyphal septin ring assembly.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of pseudohyphal septin ring assembly","termid":"GO:0062164"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pseudohyphal septin ring assembly","termid":"GO:0062166"}


id: PBO:0041560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 67","termid":"PBO:0041560"}


id: PBO:0058035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4256","termid":"PBO:0058035"}


id: PBO:0050096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 6","termid":"PBO:0050096"}


id: PBO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 2","termid":"PBO:0043052"}


id: GO:0051538
data:
  {"annotated_genes":["SJAG_00260","SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85036,97698],"is_not":false,"summary":null,"term":"GO:0051538"}]},"cv_name":"molecular_function","definition":"Binding to a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.","definition_xrefs":["GOC:ai","Wikipedia:Iron-sulfur_cluster","PMID:15952888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3 iron, 4 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3 Fe 4 S cluster binding","type":"exact"},{"name":"3 iron, 4 sulphur cluster binding","type":"exact"},{"name":"3Fe-4S cluster binding","type":"exact"},{"name":"iron-sulfur cluster 3Fe-4S binding","type":"exact"},{"name":"iron-sulphur cluster 3Fe-4S binding","type":"exact"},{"name":"triiron tetrasulfide cluster binding","type":"exact"},{"name":"triiron tetrasulphide cluster binding","type":"exact"}],"termid":"GO:0051538","terms_by_termid":{"GO:0051538":null}}


id: GO:0022031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an astrocyte cell through the telencephalon.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"},{"relation_name":"is_a","term_name":"astrocyte cell migration","termid":"GO:0043615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon astrocyte cell migration","termid":"GO:0022031"}


id: GO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a T cell.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated immunity","synonyms":[{"name":"T lymphocyte mediated immunity","type":"exact"},{"name":"T-cell mediated immunity","type":"exact"},{"name":"T-lymphocyte mediated immunity","type":"exact"},{"name":"cell-mediated immunity","type":"broad"},{"name":"cellular immune response","type":"broad"}],"termid":"GO:0002456"}


id: PBO:0082997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic protein involved in repression of iron regulon transcription; forms an iron-independent complex with Fra1p, Grx3p, and Grx4p; null mutant fails to repress the iron regulon and is sensitive to nickel; sequence similarity to human BOLA family member, BOLA2","termid":"PBO:0082997"}


id: GO:0036050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-lysine residue by the addition of a succinyl group (CO-CH2-CH2-CO) to form N6-succinyl-L-lysine.","definition_xrefs":["GOC:jsg","PMID:21151122","GOC:sp","RESID:AA0545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein succinylation","termid":"GO:0018335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine succinylation","termid":"GO:0036050"}


id: PBO:0077784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I pseudogene 2","termid":"PBO:0077784"}


id: GO:0031013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin I, the inhibitory subunit of the troponin complex.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"troponin I binding","termid":"GO:0031013"}


id: PR:O74630
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine-protein kinase ATM that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase tel1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.03c","secondary_identifiers":["UniProtKB:O74630"],"synonyms":[{"name":"ATM homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-damage checkpoint kinase tel1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC23B6.03c","type":"related"},{"name":"Spom972h-ATM","type":"exact"},{"name":"telomere length regulation protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74630"}


id: GO:0051791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a medium-chain fatty acid. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolisms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"medium-chain fatty acid metabolic process","synonyms":[{"name":"medium chain fatty acid metabolic process","type":"exact"},{"name":"medium chain fatty acid metabolism","type":"exact"},{"name":"medium-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0051791"}


id: PBO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type zinc finger","termid":"PBO:0004120"}


id: PBO:0076239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2","termid":"PBO:0076239"}


id: PBO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1761 family protein","termid":"PBO:0002194"}


id: PBO:0076290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin III","termid":"PBO:0076290"}


id: PBO:0086640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YDR476C is not an essential gene","termid":"PBO:0086640"}


id: PBO:0016074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease (predicted)","termid":"PBO:0016074"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: PR:P87142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog C57A7.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.12","synonyms":[{"name":"Spom972h-ssz1","type":"exact"}],"termid":"PR:P87142"}


id: GO:0016312
data:
  {"annotated_genes":["SJAG_01702","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004441"},{"annotations":[104483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol bisphosphate + H2O = myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"inositol bisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:57840","Reactome:R-HSA-6809565","Reactome:R-HSA-6809561"],"termid":"GO:0016312","terms_by_termid":{"GO:0004441":null,"GO:0030487":null}}


id: GO:0019607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["ISBN:0395825172","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"phenylethylamine metabolic process","termid":"GO:0042443"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine catabolic process","secondary_identifiers":["MetaCyc:2PHENDEG-PWY"],"synonyms":[{"name":"phenylethylamine breakdown","type":"exact"},{"name":"phenylethylamine catabolism","type":"exact"},{"name":"phenylethylamine degradation","type":"exact"}],"termid":"GO:0019607"}


id: GO:1902060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["GOC:TermGenie","PMID:23480775","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"positively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"activation of ascus development","type":"narrow"},{"name":"activation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"activation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"activation of perfect stage fruiting body development","type":"narrow"},{"name":"activation of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"positive regulation of ascus development","type":"narrow"},{"name":"positive regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"positive regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"positive regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of ascus development","type":"narrow"},{"name":"up regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"up-regulation of ascus development","type":"narrow"},{"name":"up-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"upregulation of ascus development","type":"narrow"},{"name":"upregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"upregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"upregulation of perfect stage fruiting body development","type":"narrow"},{"name":"upregulation of sporocarp development involved in sexual reproduction","type":"exact"}],"termid":"GO:1902060"}


id: GO:0102258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 1,3-diglyceride = a monoglyceride + a fatty acid.","definition_xrefs":["GOC:pz","PMID:21477884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"1,3-diacylglycerol acylhydrolase activity","secondary_identifiers":["MetaCyc:RXN-12433"],"termid":"GO:0102258"}


id: GO:0038040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Activation of one protomer of a consequence of a G protein-coupled (GPCR) heterodimer by the associated subunit. For example, agonist occupancy in one protomer of a GPCR dimer may activate the associated promoter.","definition_xrefs":["GOC:al","GOC:bf","PMID:21063387"],"gene_count":0,"genotype_count":0,"name":"obsolete cross-receptor activation within G-protein coupled receptor heterodimer (obsolete GO:0038040)","termid":"GO:0038040"}


id: GO:1990533
data:
  {"annotated_genes":["SJAG_02601","SJAG_04283"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103349,112189],"is_not":false,"summary":null,"term":"GO:1990533"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of one subunit known as Dom34 or Pelota that has similarity to translation termination factor eRF1, and another subunit, Hbs1, that is a GTPase with similarity to translation termination factor eRF3. The Dom34-Hbs1 complex has a role in cotranslational mRNA quality control by promoting ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, facilitating no-go decay and nonstop decay.","definition_xrefs":["PMID:20890290","PMID:22503425","PMID:21102444","GOC:mcc","PMID:21448132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02601":null,"SJAG_04283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dom34-Hbs1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dom34:Hbs1 complex","type":"exact"}],"termid":"GO:1990533","terms_by_termid":{"GO:1990533":null}}


id: MOD:01375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4R)-4,5-dihydroxyleucine.","definition_xrefs":["PubMed:6893271","RESID:AA0445","PubMed:6010785","ChEBI:141823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated leucine","termid":"MOD:01412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-4,5-dihydroxyleucine","synonyms":[{"name":"(2S,4R)-2-amino-4,5-dihydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"(4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"MOD_RES (4R)-4,5-dihydroxyleucine","type":"exact"},{"name":"gamma,delta-dihydroxyleucine","type":"exact"}],"termid":"MOD:01375"}


id: SOFP:cyto_range
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The cytological range covered by a feature. May be auto-generated from sequence coordinates, or determined by experimental methods","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyto_range","termid":"SOFP:cyto_range"}


id: GO:0051159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol catabolic process","termid":"GO:0051157"},{"relation_name":"is_a","term_name":"D-arabitol metabolic process","termid":"GO:0051163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-arabitol catabolic process","synonyms":[{"name":"D-arabitol breakdown","type":"exact"},{"name":"D-arabitol catabolism","type":"exact"},{"name":"D-arabitol degradation","type":"exact"}],"termid":"GO:0051159"}


id: GO:0016125
data:
  {"annotated_genes":["SJAG_00413","SJAG_04499","SJAG_04790","SJAG_00717","SJAG_01307","SJAG_03509","SJAG_03235","SJAG_04865","SJAG_03249","SJAG_02044","SJAG_04217","SJAG_03598","SJAG_03715","SJAG_02719","SJAG_00158","SJAG_00370","SJAG_03018","SJAG_04810","SJAG_01474","SJAG_02068","SJAG_04059","SJAG_02104","SJAG_00580","SJAG_03531","SJAG_00624","SJAG_03349","SJAG_03352","SJAG_04018","SJAG_04049","SJAG_02855","SJAG_04270","SJAG_03929","SJAG_00770","SJAG_00261","SJAG_02982","SJAG_03750","SJAG_03024","SJAG_00453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97645],"is_not":false,"summary":null,"term":"GO:0016125"},{"annotations":[95019,111395,90621,84704,105427,111065,88727,94219,99531,92770,84923,88780,90812,102699,95756,100866,104024,106269,107990,112706,84952,100439,107483,87673,114994,100169,103710,103891,84985,100624,105669,85866,111237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[90066],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[106039],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[106040],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84793,84792,102005],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00261":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sterol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sterol metabolism","type":"exact"}],"termid":"GO:0016125","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0016125":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0046053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 1","termid":"PBO:0046053"}


id: GO:0051703
data:
  {"annotated_genes":["SJAG_03484","SJAG_01253","SJAG_01975","SJAG_02380","SJAG_03802","SJAG_04191","SJAG_04720","SJAG_00926","SJAG_00239","SJAG_03473","SJAG_00910"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96971,112121,96972,112120,88678,88679,98891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[99729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[99730,102421],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[112309,107552,102062,104941,104818,110260],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process in which an organism has an effect on an organism of the same species.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in intraspecies interaction between organisms","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intraspecies interaction between organisms","type":"exact"},{"name":"intraspecies interaction with other organisms","type":"exact"}],"termid":"GO:0051703","terms_by_termid":{"GO:0000128":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: GO:0102412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = valerena-4,7(11)-diene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"valerena-4,7(11)-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-13769","RHEA:34467"],"termid":"GO:0102412"}


id: GO:0010431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in seed development that occurs after embryogenesis by which a quiescent state is established in a seed. Seed maturation is characterized by storage compound accumulation, acquisition of desiccation tolerance, growth arrest and the entry into a dormancy period of variable length that is broken upon germination.","definition_xrefs":["PMID:16096971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed maturation","termid":"GO:0010431"}


id: PBO:0035925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035925"}


id: PBO:0080595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 25","termid":"PBO:0080595"}


id: FYPO:0004664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation on tyrosine residues is longer than normal during a cellular response to salt stress. All protein tyrosine phosphorylation may be affected, or tyrosine residues in one or more specific proteins, or at specific protein sites, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased duration of protein tyrosine phosphorylation during cellular response to salt stress (obsolete FYPO:0004664)","synonyms":[{"name":"increased duration of protein tyrosine phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased duration of protein tyrosine phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"prolonged protein tyrosine phosphorylation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004664"}


id: GO:1900483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"}


id: GO:1903023
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of an ascospore-type prospore membrane.","definition_xrefs":["GOC:TermGenie","PMID:11405625","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of FSM assembly","type":"exact"},{"name":"regulation of FSM biosynthesis","type":"exact"},{"name":"regulation of FSM formation","type":"exact"},{"name":"regulation of ascospore-type prospore membrane assembly","type":"related"},{"name":"regulation of forespore membrane biosynthesis","type":"exact"},{"name":"regulation of forespore membrane formation","type":"exact"}],"termid":"GO:1903023","terms_by_termid":{"GO:1903024":null}}


id: FYPO:0006034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, morphology, or other physical characteristic of the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrion","synonyms":[{"name":"normal mitochondria","type":"exact"},{"name":"normal mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0006034"}


id: GO:0042962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + acridine(in) = H+(in) + acridine(out).","definition_xrefs":["PMID:10735876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"acridine:proton antiporter activity","synonyms":[{"name":"acridine efflux pump activity","type":"related"},{"name":"acridine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0042962"}


id: PBO:0082715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA3b histone acetyltransferase complex; regulates interaction between NuA3b and H3K36me3 at the transcribed regions of genes; contains PWWP domain; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082715"}


id: PBO:0087578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the alpha-1,6 mannosyltransferase complex; type II membrane protein; has a role in retention of glycosyltransferases in the Golgi; involved in osmotic sensitivity and resistance to aminonitrophenyl propanediol","termid":"PBO:0087578"}


id: GO:0021738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fastigial nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:curators","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fastigial nucleus development","termid":"GO:0021738"}


id: GO:0033644
data:
  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell membrane","references_by_uniquename":{"PMID:30726171":null},"termid":"GO:0033644","terms_by_termid":{"GO:0085039":null}}


